Basic Statistics
Measure | Value |
---|---|
Filename | DRR015341_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15303675 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 38254 | 0.24996610291318916 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 30546 | 0.1995991158986322 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 17126 | 0.1119077607176054 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 22210 | 0.0 | 52.66884 | 1 |
GTATCAA | 41655 | 0.0 | 40.65458 | 1 |
ATCAACG | 49450 | 0.0 | 33.67877 | 3 |
TCAACGC | 49620 | 0.0 | 33.544823 | 4 |
CAACGCA | 52425 | 0.0 | 31.723967 | 5 |
TATCAAC | 53125 | 0.0 | 31.528963 | 2 |
AACGCAG | 53880 | 0.0 | 30.926395 | 6 |
ACGCAGA | 60000 | 0.0 | 27.423046 | 7 |
GTACATG | 41975 | 0.0 | 27.28304 | 1 |
CGCAGAG | 60425 | 0.0 | 27.101885 | 8 |
TACATGG | 41370 | 0.0 | 26.166868 | 2 |
ACATGGG | 42145 | 0.0 | 24.897436 | 3 |
GCAGAGT | 66100 | 0.0 | 24.125608 | 9 |
CAGAGTA | 64150 | 0.0 | 20.426199 | 10-11 |
AGAGTAC | 60310 | 0.0 | 20.146286 | 10-11 |
CATGGGG | 26700 | 0.0 | 19.888323 | 4 |
GAGTACT | 46390 | 0.0 | 19.419064 | 12-13 |
GTGGTAT | 10130 | 0.0 | 18.594786 | 1 |
GAGTACA | 31265 | 0.0 | 18.190802 | 1 |
GTACTTT | 48830 | 0.0 | 18.1785 | 14-15 |