Basic Statistics
Measure | Value |
---|---|
Filename | DRR015316_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11717281 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 31680 | 0.2703698921277044 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 28147 | 0.24021784576131613 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 16073 | 0.13717346200027122 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 23020 | 0.0 | 54.906086 | 1 |
GTATCAA | 42310 | 0.0 | 39.34318 | 1 |
ATCAACG | 52510 | 0.0 | 31.405418 | 3 |
TCAACGC | 53140 | 0.0 | 31.041658 | 4 |
TATCAAC | 54520 | 0.0 | 30.44323 | 2 |
CAACGCA | 55480 | 0.0 | 29.89687 | 5 |
GTGGTAT | 10170 | 0.0 | 29.100384 | 1 |
AACGCAG | 58155 | 0.0 | 28.693874 | 6 |
TGGTATC | 9955 | 0.0 | 28.542522 | 2 |
ACGCAGA | 64885 | 0.0 | 25.460081 | 7 |
CGCAGAG | 64815 | 0.0 | 25.361664 | 8 |
GTACATG | 41145 | 0.0 | 24.43365 | 1 |
TACCTGG | 9475 | 0.0 | 24.31758 | 2 |
TACATGG | 40810 | 0.0 | 23.632431 | 2 |
GCAGAGT | 69275 | 0.0 | 23.263542 | 9 |
GTACCTG | 10455 | 0.0 | 23.124739 | 1 |
TATAACG | 1170 | 0.0 | 22.573097 | 2 |
TCTGTCG | 2735 | 0.0 | 22.124813 | 8 |
ACATGGG | 41450 | 0.0 | 22.028486 | 3 |
ATAACGC | 1200 | 0.0 | 21.241493 | 3 |