Basic Statistics
Measure | Value |
---|---|
Filename | DRR015307_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12289921 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 27822 | 0.22638062522940547 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 25746 | 0.20948873471196439 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 14095 | 0.11468747439466861 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 23230 | 0.0 | 54.449043 | 1 |
GTATCAA | 42495 | 0.0 | 40.064987 | 1 |
ATCAACG | 52845 | 0.0 | 31.704073 | 3 |
TCAACGC | 53365 | 0.0 | 31.42924 | 4 |
TATCAAC | 55195 | 0.0 | 30.521177 | 2 |
CAACGCA | 55170 | 0.0 | 30.466932 | 5 |
GTGGTAT | 9205 | 0.0 | 29.29284 | 1 |
AACGCAG | 58110 | 0.0 | 29.027262 | 6 |
TGGTATC | 9715 | 0.0 | 26.410925 | 2 |
ACGCAGA | 65130 | 0.0 | 25.619196 | 7 |
CGCAGAG | 64800 | 0.0 | 25.490026 | 8 |
GCAGAGT | 69155 | 0.0 | 23.411282 | 9 |
GTACATG | 39865 | 0.0 | 23.20501 | 1 |
TACATGG | 39145 | 0.0 | 22.476439 | 2 |
ACATGGG | 41170 | 0.0 | 20.595972 | 3 |
GAGTACT | 46730 | 0.0 | 20.374783 | 12-13 |
CAGAGTA | 68310 | 0.0 | 20.225403 | 10-11 |
AGAGTAC | 65560 | 0.0 | 19.675573 | 10-11 |
GTACTTT | 48570 | 0.0 | 19.21082 | 14-15 |
AGTACTT | 47615 | 0.0 | 18.62001 | 12-13 |