Basic Statistics
Measure | Value |
---|---|
Filename | DRR015287_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11679454 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 36940 | 0.0 | 35.676178 | 1 |
GTATCAA | 59775 | 0.0 | 33.473507 | 1 |
ATCAACG | 73900 | 0.0 | 26.93636 | 3 |
TCAACGC | 73965 | 0.0 | 26.918768 | 4 |
TATCAAC | 75835 | 0.0 | 26.273005 | 2 |
CAACGCA | 79295 | 0.0 | 25.105516 | 5 |
AACGCAG | 80870 | 0.0 | 24.649305 | 6 |
GTACATG | 55015 | 0.0 | 23.45733 | 1 |
ACGCAGA | 86335 | 0.0 | 22.861036 | 7 |
TACATGG | 53470 | 0.0 | 22.639738 | 2 |
CGCAGAG | 87630 | 0.0 | 22.353065 | 8 |
GCAGAGT | 90125 | 0.0 | 21.24043 | 9 |
ACATGGG | 56720 | 0.0 | 20.892195 | 3 |
GAGTACT | 44135 | 0.0 | 20.523304 | 12-13 |
AGTACTT | 43955 | 0.0 | 20.095676 | 12-13 |
GTACTTT | 45200 | 0.0 | 19.839005 | 14-15 |
AGAGTAC | 72290 | 0.0 | 19.798378 | 10-11 |
CATGGGG | 35660 | 0.0 | 18.02579 | 4 |
CAGAGTA | 87945 | 0.0 | 17.452463 | 10-11 |
GTATTAG | 6505 | 0.0 | 17.30708 | 1 |