Basic Statistics
Measure | Value |
---|---|
Filename | DRR015281_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8254419 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 26479 | 0.3207857512442729 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 21338 | 0.25850396012123933 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 12643 | 0.1531664433317475 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 19905 | 0.0 | 52.618923 | 1 |
GTATCAA | 36820 | 0.0 | 41.61674 | 1 |
ATCAACG | 47970 | 0.0 | 31.746094 | 3 |
TCAACGC | 48425 | 0.0 | 31.466593 | 4 |
TATCAAC | 49480 | 0.0 | 30.878782 | 2 |
CAACGCA | 50760 | 0.0 | 30.019108 | 5 |
AACGCAG | 52265 | 0.0 | 29.21561 | 6 |
ACGCAGA | 58365 | 0.0 | 25.959522 | 7 |
CGCAGAG | 59305 | 0.0 | 25.440836 | 8 |
GTACATG | 48050 | 0.0 | 24.728727 | 1 |
TACATGG | 46180 | 0.0 | 24.594866 | 2 |
GCAGAGT | 62335 | 0.0 | 23.57694 | 9 |
GTGGTAT | 8550 | 0.0 | 23.13544 | 1 |
ACATGGG | 49600 | 0.0 | 22.28431 | 3 |
TGGTATC | 8600 | 0.0 | 22.055527 | 2 |
GAGTACT | 32375 | 0.0 | 21.125034 | 12-13 |
AGTACTT | 32630 | 0.0 | 20.813517 | 12-13 |
AGAGTAC | 57645 | 0.0 | 20.397223 | 10-11 |
GTACTTT | 33080 | 0.0 | 20.311771 | 14-15 |
CAGAGTA | 60230 | 0.0 | 19.854147 | 10-11 |