Basic Statistics
Measure | Value |
---|---|
Filename | DRR015261_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9127505 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 29586 | 0.3241411535792092 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 24893 | 0.27272513134750404 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 14066 | 0.15410564004073402 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 20820 | 0.0 | 54.200577 | 1 |
GTATCAA | 38750 | 0.0 | 42.19782 | 1 |
ATCAACG | 49610 | 0.0 | 32.657722 | 3 |
TCAACGC | 49985 | 0.0 | 32.27235 | 4 |
TATCAAC | 50995 | 0.0 | 31.866861 | 2 |
CAACGCA | 53835 | 0.0 | 30.040493 | 5 |
AACGCAG | 55590 | 0.0 | 29.14942 | 6 |
GTGGTAT | 8450 | 0.0 | 27.875916 | 1 |
ACGCAGA | 60690 | 0.0 | 26.37216 | 7 |
TGGTATC | 8850 | 0.0 | 26.106348 | 2 |
CGCAGAG | 61735 | 0.0 | 25.698427 | 8 |
GCAGAGT | 63920 | 0.0 | 24.13811 | 9 |
GTACATG | 44420 | 0.0 | 22.906971 | 1 |
TACATGG | 43495 | 0.0 | 22.276396 | 2 |
GAGTACT | 35195 | 0.0 | 20.587835 | 12-13 |
CAGAGTA | 61890 | 0.0 | 20.375423 | 10-11 |
ACATGGG | 46200 | 0.0 | 20.282406 | 3 |
AGAGTAC | 59945 | 0.0 | 20.095335 | 10-11 |
AGTACTT | 36030 | 0.0 | 20.03494 | 12-13 |
GTACTTT | 36745 | 0.0 | 19.44649 | 14-15 |