Basic Statistics
Measure | Value |
---|---|
Filename | DRR015221_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5083124 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 19504 | 0.3837010468365517 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 15681 | 0.3084913923012698 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 10862 | 0.21368748824541756 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 10940 | 0.0 | 53.559566 | 1 |
ACAACGC | 900 | 0.0 | 41.49826 | 3 |
GTATCAA | 20700 | 0.0 | 40.85022 | 1 |
TACCTGG | 4890 | 0.0 | 39.402157 | 2 |
GTACCTG | 5315 | 0.0 | 36.747673 | 1 |
TATAACG | 540 | 0.0 | 33.74075 | 2 |
GTGGTAT | 4655 | 0.0 | 31.566435 | 1 |
ATCAACG | 26705 | 0.0 | 31.41634 | 3 |
ACCTGGG | 5990 | 0.0 | 31.099615 | 3 |
TCAACGC | 27235 | 0.0 | 30.804974 | 4 |
TATCAAC | 27755 | 0.0 | 30.344793 | 2 |
TGGTATC | 4785 | 0.0 | 29.890709 | 2 |
CAACGCA | 28280 | 0.0 | 29.829138 | 5 |
AACGCAG | 29890 | 0.0 | 28.252878 | 6 |
GTACCGG | 515 | 0.0 | 26.582962 | 1 |
ACGCAGA | 33590 | 0.0 | 24.991936 | 7 |
CGCAGAG | 33770 | 0.0 | 24.777838 | 8 |
TAACGCA | 755 | 0.0 | 24.734062 | 4 |
GTACAAC | 2020 | 0.0 | 23.72069 | 1 |
GTACATG | 21805 | 0.0 | 23.690798 | 1 |