Basic Statistics
Measure | Value |
---|---|
Filename | DRR015215_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5997094 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 22495 | 0.37509833929566555 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 19018 | 0.31712025857857157 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 12050 | 0.20093065074517757 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 12930 | 0.0 | 50.423676 | 1 |
GTATCAA | 23015 | 0.0 | 38.200718 | 1 |
ATCAACG | 28400 | 0.0 | 30.645235 | 3 |
TACCTGG | 5340 | 0.0 | 30.361671 | 2 |
TCAACGC | 28775 | 0.0 | 30.293343 | 4 |
TATCAAC | 29450 | 0.0 | 29.5833 | 2 |
CAACGCA | 29835 | 0.0 | 29.297253 | 5 |
AACGCAG | 31085 | 0.0 | 28.192095 | 6 |
GTACCTG | 6085 | 0.0 | 28.042183 | 1 |
GTGGTAT | 6355 | 0.0 | 26.420015 | 1 |
ACAACGC | 1070 | 0.0 | 26.389338 | 3 |
TAACGCA | 820 | 0.0 | 26.103851 | 4 |
ACGCAGA | 34615 | 0.0 | 25.10678 | 7 |
CGCAGAG | 34790 | 0.0 | 24.823542 | 8 |
TATAACG | 755 | 0.0 | 24.731693 | 2 |
TGGTATC | 6375 | 0.0 | 24.717974 | 2 |
ATAACGC | 785 | 0.0 | 23.786732 | 3 |
GCAGAGT | 36815 | 0.0 | 23.124615 | 9 |
GTACATG | 17255 | 0.0 | 22.184406 | 1 |
TACAACG | 1270 | 0.0 | 21.874748 | 2 |