Basic Statistics
Measure | Value |
---|---|
Filename | DRR015191_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13371990 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 36351 | 0.27184435525303263 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 34187 | 0.25566127405120703 | No Hit |
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGT | 20531 | 0.1535373568182447 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 18861 | 0.1410485649480743 | No Hit |
TCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGTCTTCTGCTTG | 15705 | 0.11744699180899776 | TruSeq Adapter, Index 10 (96% over 28bp) |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 30900 | 0.0 | 58.723183 | 1 |
GTATCAA | 58215 | 0.0 | 40.91566 | 1 |
GTGGTAT | 11255 | 0.0 | 36.249523 | 1 |
TGGTATC | 11210 | 0.0 | 35.71865 | 2 |
ATCAACG | 74750 | 0.0 | 31.45175 | 3 |
TATCAAC | 75640 | 0.0 | 31.238111 | 2 |
TCAACGC | 75615 | 0.0 | 31.101196 | 4 |
CAACGCA | 78905 | 0.0 | 29.823153 | 5 |
AACGCAG | 82535 | 0.0 | 28.611555 | 6 |
GTACATG | 64535 | 0.0 | 25.330215 | 1 |
ACGCAGA | 94000 | 0.0 | 25.068438 | 7 |
CGCAGAG | 94265 | 0.0 | 24.93059 | 8 |
TACATGG | 63810 | 0.0 | 24.53657 | 2 |
GCAGAGT | 99705 | 0.0 | 23.264399 | 9 |
ACATGGG | 67120 | 0.0 | 22.264702 | 3 |
CATGGGG | 34180 | 0.0 | 20.707706 | 4 |
GAGTACT | 60100 | 0.0 | 20.698223 | 12-13 |
CAGAGTA | 96245 | 0.0 | 20.414793 | 10-11 |
CATGGGT | 18605 | 0.0 | 20.121698 | 4 |
GTACTTT | 62170 | 0.0 | 19.570602 | 14-15 |