Basic Statistics
Measure | Value |
---|---|
Filename | DRR015176_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17626553 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 28260 | 0.16032629862458078 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 25318 | 0.1436355707210593 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 31090 | 0.0 | 55.19112 | 1 |
GTATCAA | 58540 | 0.0 | 41.65107 | 1 |
ATCAACG | 75900 | 0.0 | 31.814201 | 3 |
TATCAAC | 76485 | 0.0 | 31.690952 | 2 |
TCAACGC | 76450 | 0.0 | 31.574547 | 4 |
GTGGTAT | 11960 | 0.0 | 31.203798 | 1 |
CAACGCA | 81240 | 0.0 | 29.71896 | 5 |
AACGCAG | 84790 | 0.0 | 28.49646 | 6 |
TGGTATC | 12700 | 0.0 | 28.432327 | 2 |
ACGCAGA | 96160 | 0.0 | 25.186274 | 7 |
GTACATG | 73335 | 0.0 | 25.098433 | 1 |
CGCAGAG | 97060 | 0.0 | 24.892973 | 8 |
TACATGG | 72365 | 0.0 | 24.592386 | 2 |
GCAGAGT | 102745 | 0.0 | 23.30837 | 9 |
ACATGGG | 76025 | 0.0 | 22.483606 | 3 |
CATGGGT | 17690 | 0.0 | 20.07884 | 4 |
CAGAGTA | 99015 | 0.0 | 19.71253 | 10-11 |
GAGTACT | 59170 | 0.0 | 19.40251 | 12-13 |
AGAGTAC | 94125 | 0.0 | 19.386446 | 10-11 |
CATGGGG | 43765 | 0.0 | 19.316797 | 4 |