Basic Statistics
Measure | Value |
---|---|
Filename | DRR015165_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13801128 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 29299 | 0.21229424145620562 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 26130 | 0.1893323502252859 | No Hit |
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGT | 17486 | 0.12669978859699005 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 15198 | 0.11012143355238789 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 29130 | 0.0 | 58.396286 | 1 |
GTATCAA | 55325 | 0.0 | 41.429585 | 1 |
GTGGTAT | 10965 | 0.0 | 33.095467 | 1 |
TGGTATC | 10910 | 0.0 | 32.036674 | 2 |
TATCAAC | 71725 | 0.0 | 31.833506 | 2 |
ATCAACG | 71860 | 0.0 | 31.64534 | 3 |
TCAACGC | 72475 | 0.0 | 31.372011 | 4 |
CAACGCA | 76390 | 0.0 | 29.704626 | 5 |
AACGCAG | 80260 | 0.0 | 28.331268 | 6 |
GTACATG | 73840 | 0.0 | 25.035322 | 1 |
TACATGG | 72800 | 0.0 | 24.730667 | 2 |
ACGCAGA | 92065 | 0.0 | 24.682602 | 7 |
CGCAGAG | 91830 | 0.0 | 24.646397 | 8 |
GCAGAGT | 97410 | 0.0 | 22.809563 | 9 |
ACATGGG | 75390 | 0.0 | 22.661934 | 3 |
CATGGGT | 15490 | 0.0 | 20.415245 | 4 |
GAGTACT | 49620 | 0.0 | 20.081892 | 12-13 |
CATGGGG | 35870 | 0.0 | 19.953474 | 4 |
CAGAGTA | 93155 | 0.0 | 19.83407 | 10-11 |
AGAGTAC | 88200 | 0.0 | 19.096233 | 10-11 |