Basic Statistics
Measure | Value |
---|---|
Filename | DRR015157_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11295734 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 27698 | 0.2452076155476041 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 23151 | 0.20495348066801147 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 14487 | 0.1282519577745014 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 23110 | 0.0 | 56.441196 | 1 |
GTATCAA | 43660 | 0.0 | 41.477272 | 1 |
GTGGTAT | 8410 | 0.0 | 33.82237 | 1 |
ATCAACG | 56035 | 0.0 | 32.112648 | 3 |
TATCAAC | 56595 | 0.0 | 31.907757 | 2 |
TCAACGC | 56495 | 0.0 | 31.801996 | 4 |
TGGTATC | 9105 | 0.0 | 30.53964 | 2 |
CAACGCA | 59235 | 0.0 | 30.32273 | 5 |
AACGCAG | 61980 | 0.0 | 29.045473 | 6 |
ACGCAGA | 70485 | 0.0 | 25.500866 | 7 |
CGCAGAG | 71030 | 0.0 | 25.26598 | 8 |
GTACATG | 52965 | 0.0 | 25.030615 | 1 |
TACATGG | 52750 | 0.0 | 24.33791 | 2 |
GCAGAGT | 75590 | 0.0 | 23.434793 | 9 |
ACATGGG | 54960 | 0.0 | 22.473045 | 3 |
CATGGGT | 15355 | 0.0 | 20.597868 | 4 |
GAGTACT | 42790 | 0.0 | 20.335867 | 12-13 |
CAGAGTA | 72345 | 0.0 | 20.246492 | 10-11 |
AGAGTAC | 69060 | 0.0 | 19.65483 | 10-11 |
CATGGGG | 28810 | 0.0 | 19.571104 | 4 |