Basic Statistics
Measure | Value |
---|---|
Filename | DRR015156_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9550507 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 19707 | 0.20634506628810387 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 17179 | 0.17987526735491632 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 10241 | 0.10722990936502114 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 18720 | 0.0 | 54.45553 | 1 |
GTATCAA | 33945 | 0.0 | 39.603584 | 1 |
GTGGTAT | 7410 | 0.0 | 31.936323 | 1 |
ATCAACG | 42745 | 0.0 | 31.065565 | 3 |
TCAACGC | 43175 | 0.0 | 30.776926 | 4 |
TATCAAC | 43500 | 0.0 | 30.650955 | 2 |
TGGTATC | 7685 | 0.0 | 29.488394 | 2 |
CAACGCA | 46245 | 0.0 | 28.723793 | 5 |
AACGCAG | 48840 | 0.0 | 27.225142 | 6 |
GTACATG | 38970 | 0.0 | 25.294601 | 1 |
TACATGG | 38545 | 0.0 | 24.745079 | 2 |
ACGCAGA | 53835 | 0.0 | 24.697935 | 7 |
CGCAGAG | 53665 | 0.0 | 24.622128 | 8 |
GCAGAGT | 57430 | 0.0 | 22.730648 | 9 |
ACATGGG | 40015 | 0.0 | 22.699537 | 3 |
CATGGGG | 21310 | 0.0 | 20.756664 | 4 |
CAGAGTA | 54550 | 0.0 | 20.06156 | 10-11 |
GAGTACT | 33350 | 0.0 | 19.824575 | 12-13 |
AGAGTAC | 51715 | 0.0 | 19.001648 | 10-11 |
GTACTTT | 33670 | 0.0 | 18.858078 | 14-15 |