Basic Statistics
Measure | Value |
---|---|
Filename | DRR015148_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13319307 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 34423 | 0.2584443770235193 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 29709 | 0.2230521452805315 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 17549 | 0.13175610412763966 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 27550 | 0.0 | 57.502316 | 1 |
GTATCAA | 53325 | 0.0 | 42.62441 | 1 |
GTGGTAT | 10225 | 0.0 | 35.21607 | 1 |
ATCAACG | 68555 | 0.0 | 33.1294 | 3 |
TGGTATC | 10715 | 0.0 | 32.74633 | 2 |
TATCAAC | 69515 | 0.0 | 32.6549 | 2 |
TCAACGC | 69770 | 0.0 | 32.578556 | 4 |
CAACGCA | 73410 | 0.0 | 30.950768 | 5 |
AACGCAG | 76940 | 0.0 | 29.579082 | 6 |
GTACATG | 75175 | 0.0 | 26.626295 | 1 |
TACATGG | 74910 | 0.0 | 26.153738 | 2 |
ACGCAGA | 87885 | 0.0 | 25.859818 | 7 |
CGCAGAG | 87855 | 0.0 | 25.802498 | 8 |
ACATGGG | 76790 | 0.0 | 24.439787 | 3 |
CATGGGT | 29460 | 0.0 | 24.277163 | 4 |
GCAGAGT | 94245 | 0.0 | 23.807037 | 9 |
CATGGGG | 34280 | 0.0 | 21.155613 | 4 |
GAGTACT | 50665 | 0.0 | 20.842562 | 12-13 |
GAGTACA | 56895 | 0.0 | 20.066938 | 1 |
CAGAGTA | 91670 | 0.0 | 20.017023 | 10-11 |