Basic Statistics
Measure | Value |
---|---|
Filename | DRR015147_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22833655 |
Sequences flagged as poor quality | 0 |
Sequence length | 97 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 59550 | 0.2607992456748602 | No Hit |
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 53941 | 0.23623462822750016 | No Hit |
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 32167 | 0.14087538766789637 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 46785 | 0.0 | 57.391346 | 1 |
GTATCAA | 89155 | 0.0 | 41.777412 | 1 |
GTGGTAT | 16755 | 0.0 | 35.66933 | 1 |
TGGTATC | 17920 | 0.0 | 32.199867 | 2 |
ATCAACG | 116200 | 0.0 | 31.798094 | 3 |
TCAACGC | 117540 | 0.0 | 31.48094 | 4 |
TATCAAC | 118090 | 0.0 | 31.40634 | 2 |
CAACGCA | 123160 | 0.0 | 30.01156 | 5 |
AACGCAG | 130170 | 0.0 | 28.462696 | 6 |
ACGCAGA | 147690 | 0.0 | 25.068048 | 7 |
CGCAGAG | 147635 | 0.0 | 24.991158 | 8 |
GTACATG | 102850 | 0.0 | 24.977985 | 1 |
TACATGG | 101390 | 0.0 | 24.604626 | 2 |
GCAGAGT | 155850 | 0.0 | 23.379227 | 9 |
ACATGGG | 104335 | 0.0 | 22.654434 | 3 |
CATGGGT | 27235 | 0.0 | 21.480423 | 4 |
CAGAGTA | 150045 | 0.0 | 20.221287 | 10-11 |
GAGTACT | 94200 | 0.0 | 20.164454 | 12-13 |
AGAGTAC | 143715 | 0.0 | 19.796602 | 10-11 |
AGTACTT | 93215 | 0.0 | 19.474464 | 12-13 |