Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR840923.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 13560087 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 52 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA | 96898 | 0.7145824359386485 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA | 55027 | 0.4058012312162894 | No Hit |
| CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCT | 24555 | 0.18108290898133617 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT | 21488 | 0.15846505999555904 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 16515 | 0.12179125399416685 | No Hit |
| CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGT | 15752 | 0.11616444643754867 | No Hit |
| CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTG | 14305 | 0.1054934234566489 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAAGCCA | 32360 | 0.0 | 179.33998 | 44 |
| CTATCAT | 22745 | 0.0 | 160.65987 | 44 |
| TTAAGCC | 31135 | 0.0 | 106.085976 | 43 |
| ACTTCTA | 8135 | 0.0 | 104.92167 | 44 |
| ACATTGG | 2980 | 0.0 | 97.76907 | 44 |
| CGACGGG | 8115 | 0.0 | 84.32119 | 44 |
| ACCACTC | 3615 | 0.0 | 72.93303 | 44 |
| ATTAAGC | 43030 | 0.0 | 72.437645 | 42 |
| AATCGCA | 2475 | 0.0 | 70.46495 | 44 |
| CCTATCA | 32035 | 0.0 | 65.45445 | 43 |
| TCGCAAA | 1590 | 0.0 | 64.691315 | 43 |
| CTAATTC | 2625 | 0.0 | 62.388657 | 43 |
| CAGGCAC | 5585 | 0.0 | 61.35115 | 44 |
| CGGTTAA | 90 | 3.45608E-11 | 57.463238 | 43 |
| ACCTTAG | 9625 | 0.0 | 56.56721 | 42 |
| GATTAAG | 48000 | 0.0 | 56.031475 | 41 |
| CGAATAT | 130 | 1.6807462E-9 | 55.240055 | 44 |
| TAATTCC | 5260 | 0.0 | 55.195053 | 44 |
| CCCTATC | 39615 | 0.0 | 54.898506 | 42 |
| CCTTAGC | 15190 | 0.0 | 53.453293 | 43 |