Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR841052.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 76128603 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CGGCAAGTTTGAATTTCGTGGAGGCTCGGG | 341466 | 0.44853837656787154 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC | 192654 | 0.2530638845428439 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA | 119644 | 0.15716037768353638 | No Hit |
| CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCT | 106815 | 0.14030863012158518 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT | 101188 | 0.13291719013942763 | No Hit |
| ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA | 98204 | 0.12899750702111268 | No Hit |
| CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA | 84295 | 0.11072710739221103 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 81490 | 0.10704255271832584 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT | 77476 | 0.10176989586949337 | No Hit |
| CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGG | 76647 | 0.10068094905143603 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTGCGC | 8580 | 0.0 | 83.86189 | 44 |
| TCGTGCG | 14855 | 0.0 | 78.16883 | 43 |
| CTATCAT | 28045 | 0.0 | 72.00138 | 44 |
| CTATACG | 11515 | 0.0 | 67.70781 | 44 |
| CCCTATC | 23365 | 0.0 | 53.8833 | 42 |
| CCTTAGC | 46715 | 0.0 | 51.18056 | 43 |
| AACGACA | 9930 | 0.0 | 49.252087 | 43 |
| CTCGTGC | 19820 | 0.0 | 49.017147 | 42 |
| ACCTTAG | 36155 | 0.0 | 46.537785 | 42 |
| CCTATCA | 26545 | 0.0 | 45.690586 | 43 |
| AACCTTA | 51050 | 0.0 | 43.81683 | 41 |
| TATGTTC | 27950 | 0.0 | 43.3938 | 43 |
| ACGACAC | 5390 | 0.0 | 42.8457 | 44 |
| TCGCAAA | 6105 | 0.0 | 42.492477 | 43 |
| GAACACA | 41960 | 0.0 | 40.82344 | 44 |
| CCCCTAT | 27510 | 0.0 | 40.26015 | 41 |
| ATGTTCT | 26790 | 0.0 | 39.325745 | 44 |
| ACTCGTG | 28080 | 0.0 | 38.79406 | 41 |
| TGCGGTC | 7045 | 0.0 | 37.727406 | 42 |
| GACAACC | 59490 | 0.0 | 37.29387 | 38 |