Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR840970.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 11378851 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA | 75442 | 0.6630019146924413 | No Hit |
| AGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAA | 26305 | 0.23117448325845905 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 22348 | 0.19639944314236998 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAA | 20920 | 0.18384984564786022 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAA | 20865 | 0.18336649280318373 | No Hit |
| AGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAA | 20397 | 0.17925359950666372 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAA | 18571 | 0.16320628506340404 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 17926 | 0.15753787443037967 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAA | 15578 | 0.13690310207946302 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA | 13519 | 0.1188081292214829 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 13097 | 0.11509949466778326 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 12454 | 0.10944866050183802 | No Hit |
| CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCT | 12158 | 0.1068473433741245 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAA | 11629 | 0.10219836783169056 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 11477 | 0.10086255633367552 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAAGCCA | 23260 | 0.0 | 221.58571 | 44 |
| CTATCAT | 6200 | 0.0 | 175.3907 | 44 |
| TTAAGCC | 22465 | 0.0 | 114.87622 | 43 |
| ACTTCTA | 1730 | 0.0 | 105.478836 | 44 |
| ACGACAC | 545 | 0.0 | 97.941345 | 44 |
| AACGACA | 875 | 0.0 | 95.18596 | 43 |
| GTGTTAG | 2230 | 0.0 | 84.85857 | 43 |
| GATTAGC | 75 | 1.1175143E-7 | 82.75664 | 44 |
| ATTAAGC | 31565 | 0.0 | 80.24786 | 42 |
| CGACGGG | 5215 | 0.0 | 78.075294 | 44 |
| ACCACTC | 920 | 0.0 | 75.56042 | 44 |
| ACGACAA | 295 | 0.0 | 71.5354 | 44 |
| CTAATCG | 525 | 0.0 | 70.675896 | 42 |
| AAACTAC | 2060 | 0.0 | 66.88941 | 43 |
| TGTGTTA | 3705 | 0.0 | 64.98494 | 42 |
| AATCGCA | 1055 | 0.0 | 62.36164 | 44 |
| AATATCG | 60 | 9.44591E-6 | 62.06748 | 44 |
| AATGTAC | 140 | 9.615178E-9 | 62.06748 | 44 |
| GATTAAG | 34510 | 0.0 | 61.08585 | 41 |
| TGCACCG | 1745 | 0.0 | 58.95979 | 43 |