Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR841077.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 5461676 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC | 27861 | 0.5101181395600911 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA | 25815 | 0.47265711111387787 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA | 15991 | 0.29278558449823827 | No Hit |
| TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG | 14892 | 0.27266355602199766 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT | 13838 | 0.2533654504587969 | No Hit |
| TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC | 13199 | 0.24166574509363062 | No Hit |
| TTGAGTTCCAGCCAGGAGGACCAGGGGCTGGGTTGGG | 10891 | 0.19940765435371854 | No Hit |
| AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAATG | 9912 | 0.18148275364558425 | No Hit |
| TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACC | 7379 | 0.1351050483404728 | No Hit |
| TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACT | 7235 | 0.13246849501874516 | No Hit |
| ATCTACCTGAGGAAAGGCACTTGCTGCTGAGGCAGG | 7174 | 0.13135162173662443 | No Hit |
| CTCTTTTCCTCCTTGGCTGTCTGAAGATAGATCGCCATCATGAACGA | 6092 | 0.11154085302753222 | No Hit |
| AGGTTTTCTGTTTCCTGTGATACCTTGGGCTGGAATCTGAAGCAA | 5795 | 0.106102961801469 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCCGATG | 10 | 0.0011910753 | 263.20187 | 44 |
| AACGCAT | 120 | 0.0 | 252.23514 | 44 |
| TGAACCG | 70 | 0.0 | 225.60162 | 44 |
| ACTGCGT | 95 | 0.0 | 221.6437 | 44 |
| AATGCGA | 85 | 0.0 | 216.7545 | 44 |
| GCCTATT | 85 | 0.0 | 216.7545 | 44 |
| ATATACT | 110 | 0.0 | 215.34698 | 44 |
| AACGCCC | 55 | 0.0 | 215.34698 | 44 |
| CTATCAT | 8115 | 0.0 | 185.52248 | 44 |
| CTCGCTA | 100 | 0.0 | 184.24133 | 44 |
| ACCGAAC | 30 | 8.242205E-7 | 175.46793 | 44 |
| AATCGCA | 335 | 0.0 | 172.84901 | 44 |
| ATTAGTG | 85 | 0.0 | 170.3071 | 44 |
| ACTTCTA | 5220 | 0.0 | 135.63469 | 44 |
| GTCACGC | 70 | 2.5465852E-11 | 131.60095 | 44 |
| AACGGTA | 30 | 1.8096133E-4 | 131.60094 | 44 |
| AGCGCCC | 20 | 0.009474494 | 131.60094 | 44 |
| AAGCCCG | 115 | 0.0 | 125.87916 | 44 |
| TATCACG | 105 | 0.0 | 125.334236 | 44 |
| TGGTACA | 180 | 0.0 | 116.978615 | 44 |