Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR841065.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 9808676 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA | 116324 | 1.1859296810293254 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC | 113267 | 1.1547633951819796 | No Hit |
| TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTC | 67137 | 0.6844654671027975 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA | 61844 | 0.6305030362915442 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT | 60254 | 0.6142928974308052 | No Hit |
| TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACT | 34999 | 0.35681676099812043 | No Hit |
| CCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCT | 34950 | 0.35631720325964483 | No Hit |
| ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG | 30022 | 0.30607596784724056 | No Hit |
| CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACA | 22196 | 0.2262894604735644 | No Hit |
| CCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTT | 17965 | 0.18315417901457853 | No Hit |
| ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC | 17779 | 0.18125789861954866 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGA | 14372 | 0.1465233432116628 | No Hit |
| ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACAT | 13360 | 0.13620594665375838 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTA | 12989 | 0.13242358091958586 | No Hit |
| AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTC | 12603 | 0.12848828934710455 | No Hit |
| CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAA | 11999 | 0.12233047559120108 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCCGTTA | 150 | 0.0 | 178.04803 | 44 |
| CTATCAT | 33010 | 0.0 | 118.597626 | 44 |
| GCCGCGC | 55 | 6.184564E-11 | 117.2103 | 44 |
| AGGCGCG | 40 | 1.4714715E-7 | 115.11726 | 44 |
| CGACATA | 15 | 4.7276833E-4 | 103.39128 | 43 |
| GTACGTT | 110 | 0.0 | 103.39128 | 43 |
| AACGACA | 1175 | 0.0 | 99.43162 | 43 |
| CCAGAAT | 3105 | 0.0 | 99.063866 | 44 |
| GCCGAGT | 80 | 0.0 | 96.92934 | 43 |
| ACTTCTA | 24530 | 0.0 | 95.51025 | 44 |
| CCCGTTT | 185 | 0.0 | 92.213844 | 43 |
| ACTGCCG | 110 | 0.0 | 92.0938 | 44 |
| GAACACA | 8995 | 0.0 | 91.01878 | 44 |
| CTTCGCG | 235 | 0.0 | 90.13436 | 44 |
| ATGTACT | 135 | 0.0 | 88.68292 | 44 |
| TTGAGTA | 140 | 0.0 | 85.51567 | 44 |
| GGTACAA | 320 | 0.0 | 83.460014 | 44 |
| ACGCGAC | 75 | 0.0 | 82.71303 | 43 |
| AGCGTAC | 180 | 0.0 | 80.41544 | 43 |
| TCCAGAA | 10265 | 0.0 | 77.65677 | 43 |