Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR840932.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1607146 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 55 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA | 5456 | 0.33948378056505135 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 3647 | 0.22692400068195423 | No Hit |
| CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA | 3538 | 0.22014179172271842 | No Hit |
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGC | 2627 | 0.16345745812763746 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT | 2553 | 0.1588530226874223 | No Hit |
| CTCTTTCCCTTCGGTGTGCCACTGAAGATCCTGGTGTCGCCATGGGCCG | 2535 | 0.15773302487764024 | No Hit |
| CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGT | 2476 | 0.1540619209455768 | No Hit |
| CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG | 2405 | 0.149644151806992 | No Hit |
| CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGT | 2182 | 0.13576862338580314 | No Hit |
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA | 2179 | 0.1355819570841728 | No Hit |
| CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGC | 2124 | 0.13215974155428317 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 2049 | 0.1274930840135246 | No Hit |
| AATTCGTGGAGAAAGAAATGGCTCC | 2040 | 0.12693308510863358 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC | 1923 | 0.11965309934505017 | No Hit |
| AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCG | 1802 | 0.11212422517929298 | No Hit |
| CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC | 1747 | 0.10870200964940334 | No Hit |
| TTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 1690 | 0.10515534991842683 | No Hit |
| CTTTTTCGCAACGGGTTTGCCGCCAGAACACAGGTGTCGTGAAAACTAC | 1677 | 0.10434646261136199 | No Hit |
| CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTT | 1622 | 0.10092424708147238 | No Hit |
| CTTTTCTTCCTTTTGGTGCGAGCTTGCTGTGGTTTTTGCTCTGGGTCCT | 1609 | 0.10011535977440754 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTTATC | 45 | 0.0 | 400.75748 | 44 |
| CTAACAG | 25 | 8.367351E-11 | 400.75748 | 44 |
| GGTATTC | 15 | 2.1269134E-6 | 400.75748 | 44 |
| CAAGCGT | 15 | 2.1269134E-6 | 400.75748 | 44 |
| ACCCAAT | 25 | 8.367351E-11 | 400.75748 | 44 |
| ATATTCA | 30 | 0.0 | 400.75748 | 44 |
| GAACGAA | 10 | 3.378159E-4 | 400.75745 | 44 |
| TCGTAAA | 20 | 1.3371391E-8 | 400.75745 | 44 |
| CAAAACG | 60 | 0.0 | 367.36102 | 44 |
| ACGATAC | 35 | 1.8189894E-12 | 343.5064 | 44 |
| ATCGAGT | 30 | 2.5102054E-10 | 333.96457 | 44 |
| CTAACTA | 25 | 4.0719897E-8 | 320.606 | 44 |
| TAAGCCA | 785 | 0.0 | 311.41663 | 44 |
| TTGCGAC | 20 | 6.708715E-6 | 300.56808 | 44 |
| AGGGTTA | 50 | 0.0 | 280.53024 | 44 |
| GGCTATG | 75 | 0.0 | 267.17166 | 44 |
| AACAGCA | 45 | 9.094947E-12 | 267.17163 | 44 |
| TTATAGG | 130 | 0.0 | 246.61998 | 44 |
| AGTATCG | 25 | 1.6346085E-5 | 240.45448 | 44 |
| ACTTCTA | 160 | 0.0 | 225.42607 | 44 |