Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR840950.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 2244841 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 52 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGC | 5835 | 0.25992932238853445 | No Hit |
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA | 4637 | 0.20656251378159968 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC | 3886 | 0.1731080285864344 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 3835 | 0.1708361527609305 | No Hit |
| CTAGGCAGGTGCTGGGGGCTTCCGAGACAATC | 2885 | 0.12851689718781864 | No Hit |
| AACTTTCCAGAACGCTCGGTGAGAGGCGGAGGAGCGG | 2535 | 0.11292559250298795 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA | 2261 | 0.10071982826400623 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCACTCG | 15 | 3.2849373E-5 | 201.91986 | 44 |
| CACGCTA | 115 | 0.0 | 175.58249 | 44 |
| CTATCAT | 900 | 0.0 | 150.3181 | 44 |
| TAAGCCA | 1835 | 0.0 | 143.59969 | 44 |
| CCAACGA | 50 | 1.4551915E-11 | 141.34389 | 44 |
| CGCACTA | 15 | 0.008853467 | 134.61324 | 44 |
| AACGTAT | 50 | 2.2700988E-9 | 121.15191 | 44 |
| GTTAGTA | 15 | 3.085928E-4 | 115.08606 | 43 |
| GACGATA | 30 | 3.246896E-9 | 115.08606 | 43 |
| TGATAGG | 20 | 6.7232304E-6 | 115.08605 | 43 |
| GCTAGTA | 40 | 1.8189894E-12 | 115.08605 | 43 |
| GCTAACC | 45 | 1.7145976E-7 | 112.177704 | 44 |
| TAGGATA | 55 | 4.4037733E-9 | 110.1381 | 44 |
| GCTTATC | 120 | 0.0 | 109.37325 | 44 |
| AAGTCGA | 85 | 0.0 | 106.89874 | 44 |
| TTAAGCC | 1505 | 0.0 | 100.55693 | 43 |
| GACGATC | 170 | 0.0 | 95.0211 | 44 |
| AGACGAT | 100 | 0.0 | 92.06885 | 43 |
| AACACGC | 45 | 5.293259E-10 | 89.51138 | 43 |
| GTATTTA | 115 | 0.0 | 87.791245 | 44 |