Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR840903.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 9467011 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA | 48990 | 0.5174811775332256 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT | 33628 | 0.35521243188584023 | No Hit |
| CCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAG | 25622 | 0.2706450853389734 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC | 23781 | 0.25119860957170115 | No Hit |
| TACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCC | 21017 | 0.2220024884306145 | No Hit |
| AGCCATTGTGGCTCCGGCCGGTTGCGCGGGCCCTCGGACCCTCAGAGA | 13876 | 0.14657213348542641 | No Hit |
| CCATCTCATCCCTGAGCCAGGATCAAACTCTACGTACTGAGTCGGAGACA | 13484 | 0.14243143902547487 | No Hit |
| CCATCTCATCCCTGAGCCATGATCAAACTCTACGTACTGAGTCGGAGACA | 13316 | 0.14065685568549566 | No Hit |
| CTCTTTTCCTCCTTGGCTGTCTGAAGATAGATCGCCATCATGAACGACA | 11329 | 0.11966818249181288 | No Hit |
| TGCCCCTCATTTACATAAATATTATACTAGCATTTACCATCTCACTTCTA | 11215 | 0.11846400093968412 | No Hit |
| CTTTTCCAAGTCTTTTGCCAACCAGTTTGTTAGACTTTCCCCTATTCT | 11034 | 0.11655209865077795 | No Hit |
| CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC | 10556 | 0.11150298652869421 | No Hit |
| CTTTTACCTCGTTGCACTGCTGAGAGCAAGATGGGTCACCAGCAGCTGT | 10167 | 0.10739398105695662 | No Hit |
| CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA | 9515 | 0.10050690761846585 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TATACGG | 150 | 0.0 | 58.27189 | 44 |
| CTATCAT | 4945 | 0.0 | 55.036648 | 44 |
| TAAGCCA | 8030 | 0.0 | 50.813908 | 44 |
| GTCGTAC | 105 | 0.0 | 48.87199 | 42 |
| CGGTTAA | 90 | 0.0 | 46.4073 | 40 |
| TAACGGT | 30 | 2.6072157E-6 | 43.807285 | 27 |
| GCGAATA | 115 | 0.0 | 42.72795 | 40 |
| TACGCTC | 185 | 0.0 | 41.821556 | 43 |
| GACGCTA | 3955 | 0.0 | 41.81329 | 31 |
| CGATATA | 165 | 0.0 | 41.1523 | 27 |
| CGGTTAT | 80 | 0.0 | 41.069336 | 27 |
| CACGATA | 20 | 0.0011058869 | 41.0503 | 1 |
| CGGTCTA | 130 | 0.0 | 41.0503 | 9 |
| GGAGACA | 7155 | 0.0 | 40.81365 | 44 |
| TACGATA | 65 | 0.0 | 40.756336 | 28 |
| CCTATCA | 5060 | 0.0 | 39.47212 | 43 |
| AATCGCA | 1590 | 0.0 | 39.23108 | 44 |
| ACCGATA | 100 | 0.0 | 38.997787 | 2 |
| CCGCTAG | 95 | 0.0 | 38.889755 | 5 |
| ACGCTAC | 4275 | 0.0 | 38.592903 | 32 |