Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR841113.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 19392512 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCG | 61939 | 0.31939647633065793 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC | 51486 | 0.26549422787517163 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA | 46708 | 0.24085585199070653 | No Hit |
| CAGTTGACACAAAATAAACTACGAAAGTGGCTTTAACATATCTGAATA | 39698 | 0.20470787899989437 | No Hit |
| ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG | 35360 | 0.18233842010771995 | No Hit |
| TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTC | 34040 | 0.17553166913084803 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA | 28431 | 0.1466081341086704 | No Hit |
| ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACAT | 26711 | 0.1377387313206252 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT | 24282 | 0.12521327819727532 | No Hit |
| TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACC | 23764 | 0.12254214410180589 | No Hit |
| TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCC | 22445 | 0.11574054975446192 | No Hit |
| ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC | 21781 | 0.11231654774791426 | No Hit |
| CAGTTGACACAAAATAAACTACGAAAGTGGCTTTAACATATCTGAA | 21242 | 0.10953712443235822 | No Hit |
| TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTT | 19618 | 0.10116275807899461 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTAGCGT | 155 | 0.0 | 113.33495 | 44 |
| CTATCAT | 18870 | 0.0 | 99.415054 | 44 |
| GAATACA | 14620 | 0.0 | 94.29144 | 44 |
| AACGACA | 3630 | 0.0 | 88.094345 | 43 |
| CCGATAC | 120 | 0.0 | 87.22925 | 43 |
| GCGTTAC | 190 | 0.0 | 85.392845 | 43 |
| ACGAACA | 905 | 0.0 | 72.5357 | 44 |
| GACGAAT | 265 | 0.0 | 69.77922 | 44 |
| TGCACCG | 625 | 0.0 | 69.528015 | 44 |
| GCGTTAG | 115 | 2.8740033E-10 | 64.31824 | 44 |
| CGGGCAC | 885 | 0.0 | 63.869556 | 43 |
| TGAATAC | 12490 | 0.0 | 63.77723 | 43 |
| CCTATCA | 17625 | 0.0 | 60.340374 | 43 |
| CCCTATC | 18290 | 0.0 | 60.304615 | 42 |
| GTCTACG | 230 | 0.0 | 60.29835 | 44 |
| CCTTAGC | 15540 | 0.0 | 58.73661 | 43 |
| CGTCGTT | 45 | 8.540004E-6 | 58.152832 | 43 |
| TCGCATT | 175 | 0.0 | 58.116123 | 44 |
| ACTTCTA | 10250 | 0.0 | 57.278526 | 44 |
| CTAACGA | 195 | 0.0 | 56.896908 | 44 |