Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR841211.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 4495710 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 54 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG | 8685 | 0.193184168907692 | No Hit |
| CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCC | 7561 | 0.16818255625918932 | No Hit |
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA | 7452 | 0.165758022648258 | No Hit |
| ATCCGAATTCAGTCTTCCTGAGGCTCTGGCTCACCTCCAGGCAGGTCCC | 7368 | 0.16388957472790727 | No Hit |
| CGGCAAGTTTGAATTTCGTGGAGGCTCGGG | 6318 | 0.14053397572352308 | No Hit |
| CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTA | 5756 | 0.12803316939927176 | No Hit |
| AAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGTTCT | 5729 | 0.12743259685344474 | No Hit |
| ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAGAA | 5574 | 0.12398486557184515 | No Hit |
| TAGCTGTTAGTTGGTAGAGGGAAATTCAGGCTACCGTCGCGAAACCTG | 5503 | 0.12240558221059633 | No Hit |
| AAAACAGCCGGGGCTCCAGCGGGAGAACGATAATGCAAAGTGCTATGTT | 5481 | 0.12191622680288541 | No Hit |
| TCGCTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAAT | 5264 | 0.11708940300864602 | No Hit |
| CGGCAAGTTTGAATTTCGTGGAGGCTCGGGTTGTGAGGGTTCCTGCTT | 5178 | 0.11517646823304883 | No Hit |
| AACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCG | 4984 | 0.11086124327414357 | No Hit |
| CATCCTGCTTCGTCAGGTTTATACCACTTTATTTGGTGTGCTGTGTTAG | 4819 | 0.10719107771631177 | No Hit |
| ATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG | 4811 | 0.107013130295326 | Illumina Single End Adapter 1 (100% over 32bp) |
| CAGTTCGGCGGTCCCGCGGGTCTGTCTCTTGCTTCAACAGTGTTTGGA | 4756 | 0.10578974177604872 | No Hit |
| CTGCGCATCAGCTCCTCCTTCTCACGTTTCTCCTGCCGTCCTAATCCCG | 4648 | 0.10338745159274064 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAAGCCA | 1545 | 0.0 | 108.484924 | 44 |
| CTATACG | 190 | 0.0 | 96.82175 | 44 |
| ATGTTCT | 1325 | 0.0 | 88.70253 | 44 |
| GACCGTA | 145 | 0.0 | 77.53159 | 44 |
| CGCTACC | 485 | 0.0 | 71.64588 | 44 |
| TTAAGCC | 1075 | 0.0 | 68.49244 | 43 |
| CTATCAT | 625 | 0.0 | 58.867626 | 44 |
| TTCAGGA | 1425 | 0.0 | 58.81025 | 44 |
| AGGTCCC | 1935 | 0.0 | 57.756516 | 43 |
| CACATGC | 1380 | 0.0 | 56.284466 | 44 |
| ATTAAGC | 1390 | 0.0 | 56.201477 | 42 |
| ATTAGTC | 370 | 0.0 | 55.24364 | 44 |
| AATCCCG | 835 | 0.0 | 54.586926 | 43 |
| GGTCCCA | 1565 | 0.0 | 51.590145 | 44 |
| TGTGTTA | 1510 | 0.0 | 49.842384 | 42 |
| CAATGAA | 1670 | 0.0 | 49.338184 | 43 |
| TACGCTA | 695 | 0.0 | 48.433796 | 42 |
| AATGAAG | 1715 | 0.0 | 47.077892 | 44 |
| ATCCTTG | 1230 | 0.0 | 46.32122 | 43 |
| AACGACA | 500 | 0.0 | 45.580086 | 43 |