Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR840910.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 2081041 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC | 7148 | 0.34348194004827387 | No Hit |
| AATTCGTGGAGAAAGAAATGGCTCC | 6203 | 0.2980719745550424 | No Hit |
| ATTCCTGCTCACCGCAGTGTAGACAGGGAAACTTTCTTTGCAGTTCAGG | 4225 | 0.20302339069725198 | No Hit |
| ATCAAGGGAAAGGCAAGACTGGGACGTCTAGTCCACAGGAAGACCTGCAC | 3648 | 0.175296882665935 | No Hit |
| CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA | 3367 | 0.16179402520181005 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT | 2571 | 0.1235439378657124 | No Hit |
| CAGGGTTAAATGGATTAAGGGCGGTGCAAGATGTGCTTTGTTAAACAGAT | 2452 | 0.11782564591471288 | No Hit |
| AACAAGAGCTGGAAGGAATGTCTCCAGATGCTAATAAGCTTGCAGGACTT | 2344 | 0.11263593557262928 | No Hit |
| TACCACACTACCCTGTTGACACAGCCTAGATCCAGAGTTCAGAAGACCT | 2337 | 0.1122995654578646 | No Hit |
| CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA | 2324 | 0.11167487810187304 | No Hit |
| AGCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCT | 2298 | 0.11042550338988998 | No Hit |
| ACATCAGAAATCTTTAGTTCCTGATGAATTAAAAAAAGAGGTACTAGTTC | 2144 | 0.10302536086506706 | No Hit |
| AGGTTCGTTTGTTCAACGATTAAAGTCCTACGTGATCTGAGTTCAGACCG | 2116 | 0.10167988040600834 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGACAC | 15 | 0.0022621946 | 69.707504 | 44 |
| ACAAGCG | 15 | 0.0022621946 | 69.707504 | 44 |
| TCGCATC | 25 | 2.9126422E-6 | 69.7075 | 44 |
| ACCGACT | 115 | 0.0 | 69.7075 | 44 |
| ATAGACC | 55 | 0.0 | 69.7075 | 44 |
| CGATTAT | 55 | 0.0 | 69.7075 | 44 |
| CCGCGTA | 75 | 0.0 | 69.7075 | 44 |
| CAATCGT | 75 | 0.0 | 69.7075 | 44 |
| TATCGTC | 25 | 2.9126422E-6 | 69.7075 | 44 |
| TACGGAT | 75 | 0.0 | 65.06033 | 44 |
| TTGCGTG | 65 | 0.0 | 64.34538 | 44 |
| CGGCACA | 160 | 0.0 | 63.17242 | 44 |
| ATCGGGA | 90 | 0.0 | 61.96222 | 44 |
| TCTACGG | 130 | 0.0 | 61.664326 | 44 |
| GCCCGAC | 85 | 0.0 | 61.506615 | 44 |
| TTCCGTT | 110 | 0.0 | 60.201927 | 44 |
| GACGTGT | 30 | 8.590992E-6 | 58.089584 | 44 |
| ATAGAAC | 120 | 0.0 | 58.089584 | 44 |
| TACTGCG | 80 | 0.0 | 56.637344 | 44 |
| AACCTAT | 100 | 0.0 | 55.766 | 44 |