Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR841118.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 4496208 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTC | 11707 | 0.26037496485927697 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA | 11499 | 0.2557488443595136 | No Hit |
| ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCCAG | 11444 | 0.25452559134274927 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC | 8924 | 0.19847836221100093 | No Hit |
| ACCGCGGCCTCAGATGAATGCGGCTGTTAAGACCTGCAATAATCC | 7086 | 0.1575994704871305 | No Hit |
| TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTT | 6921 | 0.15392971143683742 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT | 6055 | 0.13466903666378424 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA | 5049 | 0.11229462693896723 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TACGGGT | 10 | 0.0021784182 | 215.13162 | 44 |
| GTCACGC | 15 | 2.5519861E-5 | 215.13162 | 44 |
| TACGGAC | 90 | 0.0 | 203.17987 | 44 |
| ACCTTGC | 205 | 0.0 | 199.39029 | 44 |
| GATGGTA | 150 | 0.0 | 193.61847 | 44 |
| ATGTACG | 135 | 0.0 | 191.22812 | 44 |
| GTGTATC | 80 | 0.0 | 188.24017 | 44 |
| AGGTAAG | 90 | 0.0 | 167.3246 | 44 |
| TTACCGC | 145 | 0.0 | 163.20331 | 44 |
| CCACGCG | 20 | 8.0356236E-5 | 161.34871 | 44 |
| CAAAGCG | 215 | 0.0 | 160.09795 | 44 |
| TTCTACG | 195 | 0.0 | 143.42108 | 44 |
| AACAACG | 75 | 0.0 | 143.42108 | 44 |
| CTATCAT | 2765 | 0.0 | 138.1044 | 44 |
| TCGCGTT | 205 | 0.0 | 136.42494 | 44 |
| CGAAATA | 165 | 0.0 | 123.86366 | 44 |
| CACGTCA | 35 | 4.8437323E-6 | 122.932365 | 44 |
| TAATCGC | 100 | 0.0 | 118.322395 | 44 |
| ACGAATT | 155 | 0.0 | 117.9754 | 44 |
| TGTGAAC | 345 | 0.0 | 112.242584 | 44 |