Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR841048.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 3396314 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAA | 33931 | 0.9990536799600979 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAA | 33194 | 0.9773536840233265 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAA | 30562 | 0.8998579047755891 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 27331 | 0.8047253581382641 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAA | 24923 | 0.7338249643584192 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC | 19564 | 0.576036255776115 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAA | 19409 | 0.5714724845818143 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 17618 | 0.5187388445237985 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTA | 12909 | 0.3800885312724324 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 10075 | 0.29664512762954187 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT | 7165 | 0.21096400391718786 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 6100 | 0.17960647925957376 | No Hit |
| TAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 5619 | 0.1654440667146795 | No Hit |
| AGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAA | 5589 | 0.1645607561609439 | No Hit |
| CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA | 5570 | 0.16400132614357799 | No Hit |
| TAAAAAAAAAAAAAAAAAAAAAAAAAAA | 5461 | 0.1607919644650053 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 5080 | 0.14957392043256307 | No Hit |
| AGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA | 4950 | 0.14574624136637543 | No Hit |
| TAAAAAAAAAAAAAAAAAAAAAAAAAA | 4699 | 0.13835587640012084 | No Hit |
| TAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 4503 | 0.13258491411571485 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT | 4484 | 0.13202548409834897 | No Hit |
| AGTGCAGTGCTTATTGTGGGAAAAAAAAAAAAAAAAAAAAAAAAAA | 3987 | 0.11739197259146238 | No Hit |
| CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACA | 3826 | 0.11265153928641462 | No Hit |
| TAAAAAAAAAAAAAAAAAAAAAAAAA | 3686 | 0.10852942336898178 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTCGTAA | 40 | 5.456968E-12 | 162.75473 | 44 |
| CGTGCGT | 30 | 2.491106E-8 | 155.00452 | 44 |
| GCGATAT | 65 | 1.8189894E-12 | 114.46487 | 44 |
| TCGACGC | 45 | 3.3287506E-10 | 94.90226 | 43 |
| CTATCAT | 1205 | 0.0 | 83.355125 | 44 |
| GTCCGCA | 60 | 3.6379788E-11 | 81.344795 | 43 |
| TACGATT | 30 | 3.9119186E-8 | 80.43323 | 42 |
| TTCGACG | 55 | 0.0 | 80.43323 | 42 |
| TCGTGCG | 325 | 0.0 | 75.087494 | 43 |
| CCCCCGT | 50 | 5.8595462E-5 | 74.40216 | 44 |
| GTACGGG | 30 | 1.1979137E-7 | 68.4383 | 41 |
| CGTTAAC | 20 | 8.86735E-5 | 68.43829 | 41 |
| TCGTCTA | 30 | 3.676516E-6 | 67.02769 | 42 |
| ACCTTAG | 2945 | 0.0 | 63.090237 | 42 |
| ACGCCCC | 45 | 0.0035983084 | 62.0018 | 44 |
| TATCGAC | 90 | 2.3704888E-7 | 62.0018 | 44 |
| TCGCAAA | 935 | 0.0 | 61.33484 | 43 |
| CGCGATA | 70 | 1.1008524E-8 | 61.008595 | 43 |
| TTGCGAC | 35 | 3.4794357E-7 | 58.661396 | 41 |
| CGCAAAT | 110 | 0.0 | 58.49689 | 42 |