Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR840919.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 5698918 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 54 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGC | 47223 | 0.8286309787226278 | No Hit |
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAA | 38239 | 0.6709870189393846 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 22036 | 0.38666989067047464 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC | 21141 | 0.3709651551399757 | No Hit |
| CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGC | 18304 | 0.32118377558687455 | No Hit |
| CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACG | 15688 | 0.2752803251424218 | No Hit |
| CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGTA | 14727 | 0.2584174750364894 | No Hit |
| CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTG | 12568 | 0.22053309066738633 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 12413 | 0.21781327613417142 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA | 11911 | 0.20900458648466252 | No Hit |
| CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCT | 10331 | 0.18128002543640742 | No Hit |
| CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCG | 10011 | 0.17566492446460888 | No Hit |
| CGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGG | 9893 | 0.1735943559812582 | No Hit |
| CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGA | 8826 | 0.15487150367841757 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 8566 | 0.15030923413883127 | No Hit |
| ATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGG | 7984 | 0.14009676924637274 | No Hit |
| CCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGT | 7059 | 0.12386561799976768 | No Hit |
| CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCT | 6817 | 0.11961919788984504 | No Hit |
| CAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGC | 6550 | 0.11493409801650066 | No Hit |
| CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGCCCCCCCGTGG | 5772 | 0.10128238377881556 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAAGCCA | 12870 | 0.0 | 223.19812 | 44 |
| CTATCAT | 4920 | 0.0 | 198.52065 | 44 |
| TGTCGTA | 25 | 9.773627E-5 | 153.61282 | 44 |
| AACGCAC | 380 | 0.0 | 144.85419 | 44 |
| CTATCTA | 570 | 0.0 | 139.23969 | 44 |
| ACTTCTA | 1360 | 0.0 | 126.128174 | 44 |
| CCGTACC | 20 | 4.304273E-6 | 125.894035 | 43 |
| AGGTACA | 195 | 0.0 | 124.728355 | 44 |
| CGACGGG | 5835 | 0.0 | 117.37055 | 44 |
| TTAAGCC | 12385 | 0.0 | 115.474884 | 43 |
| TTCATAG | 210 | 0.0 | 109.723434 | 44 |
| TCTAGAC | 120 | 0.0 | 106.67557 | 44 |
| GCTATAC | 30 | 2.5588997E-7 | 104.911705 | 43 |
| TTATGAG | 460 | 0.0 | 102.96512 | 44 |
| TTTGTAC | 320 | 0.0 | 92.007675 | 44 |
| GCATACC | 290 | 0.0 | 88.28323 | 44 |
| TATTATG | 80 | 0.0 | 86.552155 | 43 |
| CGAATTT | 60 | 2.7284841E-11 | 83.92936 | 43 |
| CGATCAT | 30 | 3.2256165E-5 | 83.92936 | 43 |
| ACATTGG | 940 | 0.0 | 83.07076 | 44 |