Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR840980.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 2961092 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC | 9000 | 0.3039419241279906 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT | 8043 | 0.27162276619571424 | No Hit |
| CCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGC | 5410 | 0.18270286772582547 | No Hit |
| AAGATAAAATTTGAAATCTGGTTAGGCTGGTGTTAGGGTTCTTTGTTTTT | 4920 | 0.16615491852330153 | No Hit |
| AAAGATAAAATTTGAAATCTGGTTAGGCTGGTGTTAGGGTTCTTTGTTTT | 4794 | 0.16189973158550966 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCT | 4741 | 0.16010985136564485 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 4254 | 0.14366321613783023 | No Hit |
| TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCG | 3941 | 0.13309279144315678 | No Hit |
| ACTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 3887 | 0.13126913989838884 | No Hit |
| CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCC | 3704 | 0.12508898744111968 | No Hit |
| ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC | 3652 | 0.12333287854615797 | No Hit |
| ACTTTTTTTTTTTTTTTTTTTTTTTTTTT | 3603 | 0.12167808362590557 | No Hit |
| ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 3546 | 0.1197531181064283 | No Hit |
| TCAGTTCTTTGACCATTCGTTGGAGCTCCGGTTTTCAGCCTCTTTCCGG | 3501 | 0.11823340848578835 | No Hit |
| CTCTTCCTGCTCTCCATCATGGCGCAGGATCAAGGTGAAAAGGAGAACC | 3265 | 0.11026337580865439 | No Hit |
| CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCT | 3235 | 0.10925023606156106 | No Hit |
| CTTTTCGATCCGCCATCTGCGGTGGAGCCGCCACCAAAATGCAGATTTT | 3125 | 0.10553539032221897 | No Hit |
| ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 3085 | 0.10418453732609456 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTA | 3050 | 0.10300254095448572 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGACGG | 45 | 3.5342964E-9 | 113.68813 | 44 |
| CGTTTGA | 310 | 0.0 | 100.34268 | 43 |
| TGCGAAT | 30 | 4.8402217E-7 | 94.26131 | 43 |
| GGACGCA | 25 | 2.2198452E-5 | 90.49085 | 43 |
| CTATCAT | 1905 | 0.0 | 90.4134 | 44 |
| CCGATTG | 60 | 2.6077032E-8 | 85.266106 | 44 |
| CCCGACT | 60 | 2.6077032E-8 | 85.266106 | 44 |
| CGATTGC | 20 | 0.001037502 | 84.835175 | 43 |
| ACGAATA | 20 | 0.001037502 | 84.835175 | 43 |
| CGTTATA | 30 | 6.586379E-8 | 74.60985 | 42 |
| GCGTTAA | 35 | 0.0018747366 | 73.085236 | 44 |
| CAGTCGA | 55 | 2.9776857E-9 | 71.98136 | 43 |
| CCCGAGC | 1345 | 0.0 | 71.63621 | 44 |
| AATCGCA | 280 | 0.0 | 70.040016 | 44 |
| AACGCAC | 170 | 0.0 | 65.20349 | 44 |
| CACGGTA | 80 | 1.9138861E-7 | 63.949577 | 44 |
| CGTCGAT | 40 | 0.0031832757 | 63.949577 | 44 |
| TCGCAAA | 775 | 0.0 | 63.48955 | 43 |
| CCCTATC | 1825 | 0.0 | 62.549625 | 42 |
| CTAATCG | 230 | 0.0 | 61.63422 | 42 |