Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR840881.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 6996937 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA | 44607 | 0.637521818475713 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC | 32908 | 0.4703200843454786 | No Hit |
| CAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACA | 24113 | 0.3446222254109191 | No Hit |
| CAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCTCT | 12581 | 0.17980724994379685 | No Hit |
| CACTTAGGAGATTTCAACTTAACTTGACCGCTCTGACCAAAAAAAAAAAA | 11969 | 0.17106056550173313 | No Hit |
| ATAGGTTTGGTCCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGC | 11653 | 0.16654430360027536 | No Hit |
| AACACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCG | 10969 | 0.15676859745914534 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT | 10721 | 0.15322418938458357 | No Hit |
| TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 10118 | 0.14460613265490313 | No Hit |
| CAGAGTGTTGCTTAACACAAAGCACCCAACTTACACTTAGGAGATTTCAA | 9992 | 0.14280534468153708 | No Hit |
| CCATCTCATCCCTGAGCCATGATCAAACTCTACGTACTGAGTCGGAGACA | 8464 | 0.12096721751246296 | No Hit |
| CACAAAGCACCCAACTTACACTTAGGAGATTTCAACTTAACTTGACCGCT | 8283 | 0.11838037129675456 | No Hit |
| CCATCTCATCCCTGAGCCAGGATCAAACTCTACGTACTGAGTCGGAGACA | 7962 | 0.11379264955508389 | No Hit |
| ATCAAAAGGGACAAGCATCAAGCACGCAGCAATGCAGCTCAAAACGCTT | 7602 | 0.1086475410597523 | No Hit |
| CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG | 7355 | 0.1051174249532331 | No Hit |
| ACTGCATTTTCCGGCAAGCCAAGGGTTGTCTGCATCTCAAGAGTGGGGT | 7185 | 0.10268779038599318 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAAGCCA | 6005 | 0.0 | 57.763916 | 44 |
| CATCGCG | 20 | 0.0058571966 | 54.82702 | 44 |
| TTCGCAT | 105 | 0.0 | 50.553688 | 42 |
| TACGGTA | 15 | 0.008073524 | 50.553684 | 42 |
| CACGTTA | 215 | 0.0 | 49.30212 | 41 |
| TTATGCG | 45 | 3.1232048E-9 | 49.15617 | 43 |
| GCGTCAC | 190 | 0.0 | 48.59679 | 40 |
| TTAAGCC | 6040 | 0.0 | 47.243637 | 43 |
| GTTACGT | 110 | 0.0 | 47.002045 | 37 |
| TAACGGT | 20 | 5.677442E-4 | 47.00204 | 37 |
| CGTCACG | 95 | 0.0 | 46.707275 | 41 |
| TAACGTT | 150 | 0.0 | 46.298374 | 44 |
| ATGCGAA | 85 | 0.0 | 45.541744 | 43 |
| TTACCGC | 95 | 0.0 | 45.478443 | 39 |
| CTATCGT | 185 | 0.0 | 45.410152 | 39 |
| CACGACG | 125 | 0.0 | 44.41163 | 35 |
| CGATCGT | 190 | 0.0 | 44.37342 | 33 |
| ACGCGCT | 35 | 1.3582394E-7 | 44.35772 | 29 |
| CGGATAC | 30 | 2.3924567E-6 | 44.357716 | 29 |
| CGTCATA | 30 | 2.5146346E-6 | 44.037827 | 28 |