Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR840925.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 2736385 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 56 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATC | 3762 | 0.1374806542208059 | No Hit |
| CTTCCGCCACGGCCGTCTCTGGAGAGCAGCAGCCATGGCCCTACGCT | 3415 | 0.12479969010208725 | No Hit |
| CTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGG | 3404 | 0.12439769988506734 | No Hit |
| CTTTTCCAAGCGGCTGCCGAAGATGGCGGAGG | 3189 | 0.11654061837058746 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTACGTA | 10 | 1.6821192E-4 | 505.79016 | 44 |
| TTAATCG | 55 | 0.0 | 459.80923 | 44 |
| TCGATAT | 25 | 1.2754754E-8 | 404.63214 | 44 |
| CTATCAT | 1090 | 0.0 | 366.58185 | 44 |
| CGTATCG | 30 | 3.1684976E-8 | 337.19342 | 44 |
| TATATTC | 45 | 7.0940587E-10 | 280.99454 | 44 |
| CCTATAT | 90 | 0.0 | 280.99454 | 44 |
| CATACAG | 20 | 0.0013417143 | 252.89508 | 44 |
| AATCGTT | 40 | 1.3307908E-7 | 252.89508 | 44 |
| GTGTAAT | 65 | 2.3646862E-11 | 233.4416 | 44 |
| GTATAAC | 45 | 2.394172E-7 | 224.79562 | 44 |
| ACAGTAA | 40 | 4.212992E-5 | 189.67131 | 44 |
| TATATTA | 100 | 1.8189894E-12 | 177.02655 | 44 |
| ATTCGAG | 180 | 0.0 | 168.59673 | 44 |
| TATAGAC | 30 | 0.004514893 | 168.59671 | 44 |
| TAATTGG | 140 | 0.0 | 162.57541 | 44 |
| ATCACAA | 80 | 2.2115273E-8 | 158.05943 | 44 |
| GTATCCG | 145 | 0.0 | 156.96936 | 44 |
| AATCTTG | 210 | 0.0 | 156.5541 | 44 |
| TGATAAG | 65 | 1.4955549E-6 | 155.62773 | 44 |