Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR840906.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 16924837 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 24-50 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCA | 167205 | 0.987926796577125 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTG | 44514 | 0.2630099185002491 | No Hit |
| AGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 41082 | 0.24273202749308603 | No Hit |
| AGTGCAGTGCTATGCTTGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA | 35699 | 0.2109266990281797 | No Hit |
| CTAAACCTAGCCCCAAACCCACTCCACCTTACTACCAGACAACCTTAGC | 30768 | 0.1817920018963846 | No Hit |
| AGTGCAGTGCTATGCTTGGGGGTAAAAAAAAAAAAAAAAAAAAAAAAAA | 30685 | 0.18130159835512744 | No Hit |
| ATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCAT | 30179 | 0.17831190929637905 | No Hit |
| AGTGCAGTGCTATGCTTGGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAA | 26055 | 0.15394535261993955 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTGCAG | 22801 | 0.13471917041209908 | No Hit |
| CAGAGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAA | 22520 | 0.13305888854350562 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAA | 21411 | 0.12650638821514204 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAA | 21142 | 0.12491700806335684 | No Hit |
| AGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA | 20253 | 0.11966437254314474 | No Hit |
| AGTGCAGTGCTATGCTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 20139 | 0.11899080623346624 | No Hit |
| AGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAA | 19645 | 0.11607201889152612 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAA | 19439 | 0.11485487275298427 | No Hit |
| AGTGCAGTGCTATGCTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAA | 18138 | 0.10716794495568849 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTGCAGTGCTATGCTTGGGAAGCAGTGGT | 17569 | 0.10380602188369671 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAA | 17232 | 0.1018148653366647 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 16989 | 0.10037910557129737 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAAGCCA | 20105 | 0.0 | 78.93542 | 44 |
| CCGATTA | 120 | 0.0 | 71.60857 | 44 |
| TTAAGCC | 20915 | 0.0 | 52.775627 | 43 |
| TAATGCG | 200 | 0.0 | 52.01043 | 44 |
| ACCGATT | 150 | 0.0 | 48.612263 | 43 |
| ATTAAGC | 20550 | 0.0 | 48.545223 | 42 |
| CTATCAT | 5805 | 0.0 | 47.135246 | 44 |
| CGTACGT | 165 | 0.0 | 46.92037 | 40 |
| CGGGTAT | 155 | 0.0 | 46.685375 | 44 |
| CGAGTAT | 60 | 0.0 | 46.54724 | 34 |
| AATCGCA | 1835 | 0.0 | 46.335556 | 44 |
| TATACGG | 80 | 6.528353E-9 | 45.22646 | 44 |
| GATTAAG | 21785 | 0.0 | 44.69735 | 41 |
| TACGATA | 100 | 0.0 | 43.025974 | 25 |
| CGAGTTA | 130 | 0.0 | 42.8247 | 41 |
| ACCTTAG | 5195 | 0.0 | 41.836033 | 42 |
| GACGATA | 270 | 0.0 | 41.74262 | 33 |
| GTACGTT | 100 | 0.0 | 41.289925 | 40 |
| CGTTCGA | 595 | 0.0 | 40.85064 | 43 |
| AGATTAA | 23365 | 0.0 | 40.83267 | 40 |