Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6792035_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 79386890 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 35 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 572392 | 0.7210157747708721 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGAT | 331528 | 0.41761051478399014 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 287261 | 0.36184941871384557 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGATAC | 142403 | 0.17937848428122075 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGCTGAT | 110182 | 0.13879117824114284 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGTATC | 229935 | 0.0 | 141.4334 | 1 |
| AACATCG | 370525 | 0.0 | 141.21266 | 2 |
| TGGAACA | 389730 | 0.0 | 140.92755 | 1 |
| ATGAATC | 195675 | 0.0 | 140.15964 | 2 |
| ACGCTTA | 131520 | 0.0 | 139.31525 | 2 |
| ATAGCGA | 104675 | 0.0 | 139.16426 | 1 |
| GCTGATC | 239825 | 0.0 | 139.07321 | 2 |
| AGAGATC | 224100 | 0.0 | 138.48676 | 2 |
| CCGACAA | 415025 | 0.0 | 138.38329 | 1 |
| CAGATTC | 173780 | 0.0 | 138.08093 | 2 |
| ACATCGA | 122500 | 0.0 | 137.49178 | 3 |
| GGAACAA | 396580 | 0.0 | 137.47925 | 2 |
| CCTAATC | 182480 | 0.0 | 137.36989 | 1 |
| TCACGCA | 203150 | 0.0 | 137.19412 | 2 |
| TAGCGAC | 106315 | 0.0 | 137.11389 | 2 |
| CGACAAC | 420030 | 0.0 | 136.80812 | 2 |
| ATCATTC | 265540 | 0.0 | 136.11003 | 1 |
| GACAACT | 145575 | 0.0 | 135.81793 | 3 |
| CTAATCC | 184190 | 0.0 | 135.81635 | 2 |
| ACATCGG | 125010 | 0.0 | 135.21265 | 3 |