Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6792050_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 100479798 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 1855474 | 1.8466139830416457 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 1119281 | 1.1139363556443456 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG | 927886 | 0.9234552800354953 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 796061 | 0.7922597535476734 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTAATCCTAGCCCTAGCCC | 674467 | 0.6712463733257107 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA | 488705 | 0.4863713997514207 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 477916 | 0.475633917974238 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 360196 | 0.35847603913375703 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT | 279497 | 0.2781623824522418 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 254267 | 0.2530528574510072 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGAGAGATGGCTCAG | 179574 | 0.1787165217031985 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTCAGGCAGCGAGAG | 146676 | 0.1459756119334555 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGAAAAAAAAAAAAAAAAAA | 118713 | 0.11814613719665319 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGAAAAAAAAAAAAAAAAA | 115148 | 0.11459816031875382 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGGCTGGTGAGATGGCTC | 104249 | 0.10375120379919553 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGAGAGATGGCTCA | 102841 | 0.10234992709678815 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 5632665 | 0.0 | 125.58469 | 1 |
| AGTGGTA | 5650875 | 0.0 | 124.889404 | 5 |
| GTGGTAT | 5665600 | 0.0 | 124.51593 | 6 |
| GTATCAA | 5690770 | 0.0 | 124.200745 | 9 |
| GGTATCA | 5685020 | 0.0 | 124.18164 | 8 |
| TGGTATC | 5690405 | 0.0 | 124.00718 | 7 |
| AGCAGTG | 5711845 | 0.0 | 123.67257 | 2 |
| GCAGTGG | 5721530 | 0.0 | 123.31651 | 3 |
| CAGTGGT | 5735245 | 0.0 | 123.06306 | 4 |
| TAGTACC | 102950 | 0.0 | 98.389786 | 145 |
| CCCTCTT | 313970 | 0.0 | 52.19441 | 145 |
| CCTCTTC | 207045 | 0.0 | 40.019493 | 145 |
| TGCGGAT | 23220 | 0.0 | 35.0407 | 145 |
| CATGGGG | 1678745 | 0.0 | 26.294933 | 25-29 |
| ATGGGGG | 707560 | 0.0 | 25.943253 | 25-29 |
| ACCCGAC | 250315 | 0.0 | 25.337585 | 60-64 |
| AGTACAT | 5647060 | 0.0 | 25.222284 | 20-24 |
| ATGGGAT | 784150 | 0.0 | 25.209526 | 25-29 |
| TACATGG | 5608815 | 0.0 | 25.203691 | 20-24 |
| GTACATG | 5639250 | 0.0 | 25.184116 | 20-24 |