Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6792048_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 84213772 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 11173149 | 13.26760307090864 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1119538 | 1.3294001365952353 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 720816 | 0.8559360100863312 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 444437 | 0.5277485967497098 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG | 340346 | 0.404145298229843 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 301198 | 0.3576588399341618 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTAATCCTAGCCCTAGCCC | 260628 | 0.3094838217198014 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 219694 | 0.26087657016479443 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA | 157869 | 0.18746221223768483 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTCAGGCAGCGAGAG | 151099 | 0.17942314708335355 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 120840 | 0.14349196946076706 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT | 109094 | 0.12954413204529064 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGAGCACACGTCTGAACTC | 91084 | 0.10815808131715084 | Illumina Multiplexing PCR Primer 2.01 (100% over 22bp) |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAGTACC | 45620 | 0.0 | 87.99254 | 145 |
| AAGCAGT | 8579785 | 0.0 | 71.97143 | 1 |
| AGTGGTA | 8584315 | 0.0 | 71.83582 | 5 |
| GTATCAA | 8594095 | 0.0 | 71.83463 | 9 |
| GGTATCA | 8690720 | 0.0 | 70.956795 | 8 |
| GTGGTAT | 8698120 | 0.0 | 70.8801 | 6 |
| TGGTATC | 8716160 | 0.0 | 70.72823 | 7 |
| AGCAGTG | 8734900 | 0.0 | 70.633385 | 2 |
| CAGTGGT | 8740210 | 0.0 | 70.56355 | 4 |
| GCAGTGG | 8894405 | 0.0 | 69.32998 | 3 |
| CGTGGGG | 57655 | 0.0 | 49.153587 | 145 |
| CAGGGGG | 96340 | 0.0 | 42.65302 | 145 |
| CCCTCTT | 151300 | 0.0 | 40.20218 | 145 |
| TGCGGAT | 15020 | 0.0 | 38.710697 | 145 |
| CAGGGGA | 239535 | 0.0 | 35.971355 | 145 |
| CGTGGGA | 179385 | 0.0 | 32.4935 | 145 |
| TGACTGG | 52300 | 0.0 | 30.398302 | 2 |
| CGGGGGA | 62065 | 0.0 | 29.798218 | 145 |
| GTGACTG | 55680 | 0.0 | 28.773792 | 1 |
| CCTCTTC | 111545 | 0.0 | 28.48708 | 145 |