Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6792038_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 78941170 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 36 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 381718 | 0.48354743158734537 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 266852 | 0.33803907390782273 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGATAC | 172012 | 0.21789897464149569 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGAT | 123716 | 0.156719237883097 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CAAGCTA | 200585 | 0.0 | 141.42502 | 2 |
| ACGCTTA | 171155 | 0.0 | 141.03062 | 2 |
| ACGTGAT | 197595 | 0.0 | 141.02603 | 2 |
| ACGTATC | 154010 | 0.0 | 140.98128 | 1 |
| GCTAACG | 137030 | 0.0 | 140.97636 | 1 |
| CTAACGA | 135060 | 0.0 | 140.69455 | 2 |
| AACGTGA | 197610 | 0.0 | 140.65375 | 1 |
| ACTTCGA | 164355 | 0.0 | 140.24884 | 2 |
| CGAACTT | 184135 | 0.0 | 139.30127 | 1 |
| ACAAGCT | 206835 | 0.0 | 139.0225 | 1 |
| TATCAGC | 145905 | 0.0 | 138.72325 | 1 |
| GAACTTA | 182545 | 0.0 | 138.68083 | 2 |
| ATGCCTA | 99625 | 0.0 | 138.41873 | 1 |
| AGTACAA | 263685 | 0.0 | 138.32501 | 1 |
| GACTAGT | 149115 | 0.0 | 138.20746 | 1 |
| AACATCG | 145050 | 0.0 | 137.85214 | 2 |
| CCGTCTA | 223285 | 0.0 | 137.59334 | 2 |
| ACTAGTA | 148790 | 0.0 | 137.25706 | 2 |
| GCGAGTA | 112395 | 0.0 | 137.13167 | 1 |
| TGGCATA | 140100 | 0.0 | 137.11835 | 2 |