Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6792037_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 104379766 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 1475637 | 1.4137193984512286 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 1130398 | 1.0829665971851288 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG | 472556 | 0.4527275909010948 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTCAGGCAGCGAGAG | 379815 | 0.3638779952811927 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTAATCCTAGCCCTAGCCC | 368266 | 0.3528135903274587 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 209124 | 0.20034917495408067 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA | 200887 | 0.19245779876532776 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTCAGGCAGCGAGA | 187592 | 0.1797206558213591 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT | 175843 | 0.16846464285041604 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 2575820 | 0.0 | 113.43491 | 1 |
| AGTGGTA | 2590390 | 0.0 | 112.42373 | 5 |
| GTGGTAT | 2593630 | 0.0 | 112.1835 | 6 |
| GGTATCA | 2600405 | 0.0 | 112.06964 | 8 |
| GTATCAA | 2610650 | 0.0 | 111.95586 | 9 |
| TGGTATC | 2614865 | 0.0 | 111.2295 | 7 |
| CAGTGGT | 2655210 | 0.0 | 109.69066 | 4 |
| AGCAGTG | 2656065 | 0.0 | 109.68752 | 2 |
| GCAGTGG | 2653960 | 0.0 | 109.62464 | 3 |
| TAGTACC | 69245 | 0.0 | 82.27968 | 145 |
| TGACTGG | 112725 | 0.0 | 41.61157 | 2 |
| GACTGGA | 121165 | 0.0 | 38.765438 | 3 |
| GTGACTG | 122200 | 0.0 | 38.609707 | 1 |
| AGTTCAG | 123900 | 0.0 | 38.055984 | 9 |
| CCCTCTT | 245660 | 0.0 | 32.4588 | 145 |
| TGCGGAT | 23320 | 0.0 | 31.553766 | 145 |
| GGAGTTC | 153030 | 0.0 | 30.560762 | 7 |
| TGGAGTT | 158145 | 0.0 | 29.815273 | 6 |
| ACTGGAG | 197880 | 0.0 | 24.081053 | 4 |
| AGCGTAG | 81735 | 0.0 | 23.9214 | 55-59 |