Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6792039_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 161501236 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 7865363 | 4.870156535520261 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG | 5606915 | 3.471747423654392 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA | 2158286 | 1.3363897722739408 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT | 1960160 | 1.2137120733862372 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 1761457 | 1.090677101691036 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTAATCCTAGCCCTAGCCC | 1205924 | 0.7466964525274593 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 906869 | 0.5615244950818828 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGAGAGATGGCTCAG | 612809 | 0.3794453932228729 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGGCTGGTGAGATGGCTC | 538332 | 0.3333299566821891 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGAGAGATGGCTCA | 357380 | 0.22128623213756704 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGCGAGATGGCTCAG | 212842 | 0.13178970345465343 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 209848 | 0.12993584767363636 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGC | 175939 | 0.10893972353251835 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAGTACC | 177215 | 0.0 | 103.22646 | 145 |
| AAGCAGT | 8863385 | 0.0 | 87.82202 | 1 |
| AGTGGTA | 8965345 | 0.0 | 86.64968 | 5 |
| GTATCAA | 9015010 | 0.0 | 86.416725 | 9 |
| AGCAGTG | 9050945 | 0.0 | 85.81631 | 2 |
| GTGGTAT | 9052750 | 0.0 | 85.79224 | 6 |
| GGTATCA | 9078195 | 0.0 | 85.61993 | 8 |
| TGGTATC | 9094180 | 0.0 | 85.40651 | 7 |
| GCAGTGG | 9172690 | 0.0 | 84.59923 | 3 |
| CAGTGGT | 9226890 | 0.0 | 84.20765 | 4 |
| CCTCTTC | 717650 | 0.0 | 67.64708 | 145 |
| CCCTCTT | 1336220 | 0.0 | 67.480385 | 145 |
| TGACTGG | 138630 | 0.0 | 34.822754 | 2 |
| GTGACTG | 148240 | 0.0 | 32.721615 | 1 |
| GACTGGA | 156165 | 0.0 | 31.005573 | 3 |
| CGTGGGG | 60410 | 0.0 | 30.09945 | 145 |
| CAGGGGA | 201020 | 0.0 | 29.004454 | 145 |
| AGTTCAG | 168965 | 0.0 | 28.596073 | 9 |
| ACCCGAC | 1179230 | 0.0 | 26.53013 | 60-64 |
| ATGGGGG | 2002190 | 0.0 | 26.40771 | 25-29 |