Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6792040_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 78899524 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 7243243 | 9.180338020797185 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 1029100 | 1.3043171211020232 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 653256 | 0.8279593676636122 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG | 351290 | 0.4452371601126517 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTAATCCTAGCCCTAGCCC | 276593 | 0.3505635851491322 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 204876 | 0.2596669657981714 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA | 179822 | 0.22791265508775438 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTCAGGCAGCGAGAG | 133297 | 0.16894525244537598 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT | 130161 | 0.16497057700880427 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 125270 | 0.1587715535520848 | No Hit |
| AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA | 80625 | 0.1021869282760185 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAGTACC | 52405 | 0.0 | 81.937965 | 145 |
| AAGCAGT | 5602165 | 0.0 | 64.838844 | 1 |
| AGTGGTA | 5670835 | 0.0 | 63.890057 | 5 |
| GTATCAA | 5712740 | 0.0 | 63.613533 | 9 |
| AGCAGTG | 5714865 | 0.0 | 63.402122 | 2 |
| GTGGTAT | 5745155 | 0.0 | 63.036694 | 6 |
| CAGTGGT | 5771075 | 0.0 | 62.785717 | 4 |
| GGTATCA | 5778255 | 0.0 | 62.737072 | 8 |
| TGGTATC | 5773845 | 0.0 | 62.73426 | 7 |
| GCAGTGG | 5826885 | 0.0 | 62.099823 | 3 |
| AATAGGG | 23685 | 0.0 | 43.67841 | 145 |
| CCCTCTT | 174245 | 0.0 | 37.682545 | 145 |
| CGTGGGG | 38440 | 0.0 | 37.040283 | 145 |
| CAGGGGA | 132350 | 0.0 | 32.449448 | 145 |
| CGTGGGA | 96650 | 0.0 | 28.353466 | 145 |
| CCTCTTC | 124965 | 0.0 | 28.165472 | 145 |
| TGCGGAT | 16465 | 0.0 | 27.563145 | 145 |
| TGACTGG | 58490 | 0.0 | 25.884842 | 2 |
| GTGACTG | 61105 | 0.0 | 24.908266 | 1 |
| CACGGGA | 84890 | 0.0 | 24.697783 | 145 |