Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6792038_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 78941170 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 9546106 | 12.09268370357318 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1058155 | 1.3404349086794636 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 590961 | 0.74860937581746 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTAATCCTAGCCCTAGCCC | 317943 | 0.4027594219847514 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG | 236517 | 0.29961172351511894 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 229961 | 0.291306804801601 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 174708 | 0.2213141761136806 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTCAGGCAGCGAGAG | 171500 | 0.2172503903856505 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA | 124541 | 0.15776431993597256 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGAGCACACGTCTGAACTC | 96917 | 0.12277117250732413 | Illumina Multiplexing PCR Primer 2.01 (100% over 22bp) |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT | 86602 | 0.10970447993106766 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTCAGGCAGCGAGA | 80428 | 0.10188346587718423 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAGTACC | 54975 | 0.0 | 91.23097 | 145 |
| GTATCAA | 6820445 | 0.0 | 61.368366 | 9 |
| AAGCAGT | 6831015 | 0.0 | 61.344265 | 1 |
| AGTGGTA | 6857635 | 0.0 | 60.930103 | 5 |
| GGTATCA | 6910345 | 0.0 | 60.378487 | 8 |
| GTGGTAT | 6941785 | 0.0 | 60.157448 | 6 |
| TGGTATC | 6944460 | 0.0 | 59.995853 | 7 |
| AGCAGTG | 6974000 | 0.0 | 59.9134 | 2 |
| CAGTGGT | 7008625 | 0.0 | 59.61084 | 4 |
| GCAGTGG | 7138590 | 0.0 | 58.511963 | 3 |
| CGTGGGG | 47520 | 0.0 | 52.893757 | 145 |
| TGCGGAT | 18475 | 0.0 | 34.846207 | 145 |
| GGTATAA | 33995 | 0.0 | 34.71735 | 8 |
| CAGGGGA | 174800 | 0.0 | 33.07625 | 145 |
| CGTGGGA | 155900 | 0.0 | 30.287397 | 145 |
| CAGGGGG | 57810 | 0.0 | 30.223244 | 145 |
| CCCTCTT | 141120 | 0.0 | 30.161333 | 145 |
| CGGTCTG | 37885 | 0.0 | 29.470018 | 145 |
| TGGTATA | 40960 | 0.0 | 28.849272 | 7 |
| TGACTGG | 63040 | 0.0 | 28.196398 | 2 |