Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6792035_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 79386890 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 9020137 | 11.362250114597007 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 923835 | 1.1637122955692054 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 491729 | 0.6194083179225185 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG | 422424 | 0.5321080092695406 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTAATCCTAGCCCTAGCCC | 286007 | 0.360269812811662 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 257078 | 0.3238292871782734 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 216880 | 0.2731937225403338 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA | 169670 | 0.21372546524999278 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT | 135382 | 0.17053445474435389 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTCAGGCAGCGAGAG | 121083 | 0.1525226646364406 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 116441 | 0.1466753515599364 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGAGCACACGTCTGAACTC | 84962 | 0.10702270866134193 | Illumina Multiplexing PCR Primer 2.01 (100% over 22bp) |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 84395 | 0.10630848494001968 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAGTACC | 47470 | 0.0 | 92.8579 | 145 |
| AAGCAGT | 6083995 | 0.0 | 62.2083 | 1 |
| GTATCAA | 6163955 | 0.0 | 61.293697 | 9 |
| AGTGGTA | 6242265 | 0.0 | 60.453335 | 5 |
| AGCAGTG | 6265595 | 0.0 | 60.21281 | 2 |
| GGTATCA | 6331325 | 0.0 | 59.46774 | 8 |
| GTGGTAT | 6347560 | 0.0 | 59.41786 | 6 |
| TGGTATC | 6345235 | 0.0 | 59.324234 | 7 |
| CGTGGGG | 46940 | 0.0 | 59.278393 | 145 |
| CAGTGGT | 6372880 | 0.0 | 59.205284 | 4 |
| GCAGTGG | 6463535 | 0.0 | 58.349323 | 3 |
| TGACTGG | 62545 | 0.0 | 39.86931 | 2 |
| AGTTCAG | 62930 | 0.0 | 39.779385 | 9 |
| GACTGGA | 67245 | 0.0 | 37.255646 | 3 |
| GTGACTG | 69280 | 0.0 | 36.096283 | 1 |
| GGTATAA | 28460 | 0.0 | 35.43329 | 8 |
| CCCTCTT | 215690 | 0.0 | 32.876667 | 145 |
| CAGGGGA | 124195 | 0.0 | 32.74864 | 145 |
| CCTCTTC | 107770 | 0.0 | 31.234556 | 145 |
| TGGTATA | 33865 | 0.0 | 29.970652 | 7 |