Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6792041_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 98297000 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 11267053 | 11.46225520616092 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1261314 | 1.283166322471693 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 1121041 | 1.1404630863607232 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTAATCCTAGCCCTAGCCC | 350678 | 0.35675351231471963 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 313961 | 0.3194003886181674 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG | 298769 | 0.3039451865265471 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 255561 | 0.25998860595949014 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTCAGGCAGCGAGAG | 148664 | 0.15123961056797255 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA | 128747 | 0.13097754763624525 | No Hit |
| AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA | 128436 | 0.13066115954708687 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGAGCACACGTCTGAACTC | 122518 | 0.12464062992766818 | Illumina Multiplexing PCR Primer 2.01 (100% over 22bp) |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT | 103426 | 0.10521786015849925 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 99234 | 0.1009532335676572 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAGTACC | 64810 | 0.0 | 85.438866 | 145 |
| CGTGGGG | 82050 | 0.0 | 66.43536 | 145 |
| AAGCAGT | 8108450 | 0.0 | 57.310417 | 1 |
| GTATCAA | 8193025 | 0.0 | 56.78196 | 9 |
| AGTGGTA | 8206380 | 0.0 | 56.49025 | 5 |
| GGTATCA | 8323440 | 0.0 | 55.713192 | 8 |
| AGCAGTG | 8323640 | 0.0 | 55.678493 | 2 |
| GTGGTAT | 8343605 | 0.0 | 55.535885 | 6 |
| TGGTATC | 8358215 | 0.0 | 55.421898 | 7 |
| CAGTGGT | 8370635 | 0.0 | 55.38429 | 4 |
| GCAGTGG | 8512495 | 0.0 | 54.38751 | 3 |
| TGACTGG | 82925 | 0.0 | 39.77667 | 2 |
| CAGGGGG | 88965 | 0.0 | 39.65252 | 145 |
| GTGACTG | 84455 | 0.0 | 39.229107 | 1 |
| GACTGGA | 88025 | 0.0 | 37.517647 | 3 |
| AGTTCAG | 93895 | 0.0 | 35.346886 | 9 |
| CCCTCTT | 176410 | 0.0 | 29.679193 | 145 |
| GGAGTTC | 111580 | 0.0 | 29.400185 | 7 |
| TGCGGAT | 19265 | 0.0 | 28.637394 | 145 |
| CAGGGGA | 187735 | 0.0 | 28.321318 | 145 |