Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR1248452_1.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 13921551 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 100 |
| %GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TGCCCTA | 8725 | 0.0 | 47.787983 | 6 |
| GCCCTAC | 23890 | 0.0 | 42.35997 | 7 |
| GCCCCTA | 7105 | 0.0 | 41.21777 | 6 |
| CCCCTAC | 57210 | 0.0 | 40.693417 | 7 |
| ATGCCCT | 3330 | 0.0 | 39.668236 | 5 |
| GTCCCTA | 3575 | 0.0 | 38.52584 | 6 |
| TGCTCTA | 9380 | 0.0 | 37.936176 | 6 |
| CCCCCTA | 30870 | 0.0 | 37.626747 | 6 |
| TTGCCCT | 3845 | 0.0 | 37.533825 | 5 |
| GGCATAT | 1115 | 0.0 | 37.52286 | 5 |
| CCGCCTA | 4410 | 0.0 | 36.774014 | 6 |
| CGCCCTA | 9430 | 0.0 | 36.339287 | 6 |
| CCCGCTA | 3035 | 0.0 | 35.932697 | 6 |
| TTGCTCT | 3335 | 0.0 | 34.816246 | 5 |
| GTCACGC | 390 | 0.0 | 33.74458 | 2 |
| GCATATC | 1270 | 0.0 | 33.311893 | 6 |
| TCGCCCT | 3220 | 0.0 | 33.285862 | 5 |
| GGCCCTA | 4060 | 0.0 | 33.11315 | 6 |
| GCTGCGT | 1225 | 0.0 | 33.00222 | 5 |
| AGCTTGC | 230 | 0.0 | 32.696613 | 2 |