Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR1248455_1.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 15544734 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 100 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TGCCCTA | 10015 | 0.0 | 49.56629 | 6 |
| GCCCTAC | 28190 | 0.0 | 42.152634 | 7 |
| GGCATAT | 1375 | 0.0 | 41.369595 | 5 |
| CCCCTAC | 66495 | 0.0 | 41.268417 | 7 |
| GCCCCTA | 7730 | 0.0 | 40.3796 | 6 |
| CCCCCTA | 36020 | 0.0 | 39.334442 | 6 |
| CGCCCTA | 10760 | 0.0 | 38.88223 | 6 |
| ATGCCCT | 3385 | 0.0 | 38.74754 | 5 |
| GTCCCTA | 4170 | 0.0 | 38.440742 | 6 |
| CCGCCTA | 5110 | 0.0 | 38.36088 | 6 |
| TAGGCAT | 1600 | 0.0 | 37.89461 | 3 |
| TTGCCCT | 4735 | 0.0 | 37.628582 | 5 |
| GCATATC | 1545 | 0.0 | 37.42399 | 6 |
| CTTAGGC | 1630 | 0.0 | 37.200397 | 1 |
| TGCTCTA | 10395 | 0.0 | 37.08197 | 6 |
| CCCGCTA | 3610 | 0.0 | 36.851288 | 6 |
| AGGCATA | 1630 | 0.0 | 36.620464 | 4 |
| GCTGCGT | 1500 | 0.0 | 36.3551 | 5 |
| TTGCTCT | 3890 | 0.0 | 36.255196 | 5 |
| TTAGGCA | 1720 | 0.0 | 35.25103 | 2 |