Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR1248476_2.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 2231558 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 100 |
| %GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTGCTGA | 2570 | 0.0 | 46.451374 | 9 |
| GCTTGCT | 495 | 0.0 | 43.67776 | 7 |
| CCTGCTG | 1090 | 0.0 | 42.688084 | 8 |
| ACTTGCT | 400 | 0.0 | 41.12593 | 7 |
| CTTGCTG | 1695 | 0.0 | 40.2065 | 8 |
| TGCTTGC | 270 | 0.0 | 38.296307 | 6 |
| GTTGCTG | 585 | 0.0 | 37.760693 | 8 |
| CTGCTGA | 1830 | 0.0 | 37.75411 | 9 |
| CATGCGC | 90 | 6.1861283E-7 | 36.561306 | 1 |
| CGTTGCC | 185 | 0.0 | 35.569973 | 3 |
| GCCTGCT | 385 | 0.0 | 35.403397 | 7 |
| TACCCGA | 2145 | 0.0 | 35.2774 | 6 |
| ACTGCTG | 300 | 0.0 | 34.466675 | 8 |
| GTAACGC | 110 | 7.6972356E-8 | 34.184128 | 2 |
| TGCCCGA | 335 | 0.0 | 33.67316 | 5 |
| TACGATG | 85 | 1.7536295E-5 | 33.181686 | 1 |
| TATGCGC | 100 | 1.4112084E-6 | 32.90222 | 2 |
| ATTGCGC | 115 | 1.13746864E-7 | 32.69786 | 2 |
| ACCCGAC | 2390 | 0.0 | 32.645092 | 7 |
| GACACGC | 275 | 0.0 | 32.474922 | 2 |