Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR10540285_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 176775363 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 4806852 | 2.719186609731357 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 3133375 | 1.772517927172917 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1776944 | 1.005198897540943 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1701465 | 0.9625012055554371 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 534269 | 0.30223046409470533 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG | 262783 | 0.148653633368582 | Illumina Single End PCR Primer 1 (100% over 22bp) |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 225847 | 0.1277593190404027 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 222820 | 0.12604697635382595 | No Hit |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 210561 | 0.11911218646458104 | No Hit |
| CCATCCTCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 195037 | 0.1103304197429367 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGCTTA | 223575 | 0.0 | 134.02376 | 2 |
| GGCTAAC | 221995 | 0.0 | 132.9475 | 2 |
| AGTTAGC | 179305 | 0.0 | 132.78659 | 2 |
| ATAGCGA | 160865 | 0.0 | 130.80945 | 1 |
| AGGCTAA | 226725 | 0.0 | 130.76498 | 1 |
| GATGTAC | 391490 | 0.0 | 130.49649 | 2 |
| CAAGCTA | 138040 | 0.0 | 129.23837 | 2 |
| CTATGCA | 172790 | 0.0 | 128.97955 | 2 |
| CAATGGA | 325705 | 0.0 | 127.977936 | 1 |
| AACGCTT | 235180 | 0.0 | 127.82275 | 1 |
| CTCAATG | 178425 | 0.0 | 127.73199 | 1 |
| TAGCGAC | 163975 | 0.0 | 127.489784 | 2 |
| CGAACTT | 112825 | 0.0 | 126.80337 | 1 |
| GAATCTG | 148805 | 0.0 | 126.49238 | 1 |
| CAAGACT | 147245 | 0.0 | 125.59858 | 1 |
| TCAATGA | 181530 | 0.0 | 125.47984 | 2 |
| ACAAGCT | 143695 | 0.0 | 124.3809 | 1 |
| GCTAACT | 92565 | 0.0 | 124.25892 | 3 |
| GGCTTCA | 179245 | 0.0 | 123.786575 | 2 |
| TCACGCA | 173535 | 0.0 | 123.76095 | 2 |