Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR10540253_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 142861825 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 2867589 | 2.007246512495553 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1758912 | 1.2311980474839936 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 922798 | 0.6459374294007514 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 697604 | 0.48830679574476943 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 320473 | 0.2243237477891662 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AACATCG | 371090 | 0.0 | 139.0335 | 2 |
| AACGTGA | 352755 | 0.0 | 138.56326 | 1 |
| GATAGAC | 237715 | 0.0 | 138.43948 | 1 |
| ACGTGAT | 354910 | 0.0 | 138.007 | 2 |
| ATAGCGA | 123280 | 0.0 | 136.61116 | 1 |
| ACGCTTA | 157670 | 0.0 | 135.42082 | 2 |
| GGCTAAC | 209215 | 0.0 | 135.08644 | 2 |
| ATAGACA | 247270 | 0.0 | 134.97525 | 2 |
| GTCACTA | 190925 | 0.0 | 134.18202 | 2 |
| TAGCGAC | 126090 | 0.0 | 133.5897 | 2 |
| AGGCTAA | 211515 | 0.0 | 133.32686 | 1 |
| ACGTATC | 124355 | 0.0 | 133.14195 | 1 |
| ACATCGA | 117985 | 0.0 | 132.89523 | 3 |
| CATCAAG | 146140 | 0.0 | 132.78085 | 1 |
| AACCGAG | 199375 | 0.0 | 132.56013 | 1 |
| CAAGCTA | 141920 | 0.0 | 132.44777 | 2 |
| GCGAGTA | 128290 | 0.0 | 131.88266 | 1 |
| AGTTAGC | 107110 | 0.0 | 131.52682 | 2 |
| AGGTACA | 159815 | 0.0 | 131.48499 | 2 |
| AGCTGAA | 176390 | 0.0 | 131.38803 | 2 |