Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR10540264_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 199013503 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 18534090 | 9.312981139777234 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTCAGGCAGCGAGAG | 7899636 | 3.969396991117733 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTCAGGCAGCGAGA | 2581772 | 1.297284838004183 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1781531 | 0.8951809666904863 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGTGAGATGGCTCAG | 913969 | 0.4592497424659672 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCGTAGCCGCATGCTGATAAG | 823624 | 0.4138533253193378 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGCTGGTGAGATGGCTCA | 603162 | 0.30307591741651824 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 486617 | 0.24451456442128955 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCTGGTGAGATGGCTCAGT | 413000 | 0.20752360707906337 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGGTTGGGGATTTAGCTCA | 277169 | 0.1392714543595567 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGTTGGGGATTTAGCTCAG | 262154 | 0.13172674016998737 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 232564 | 0.11685840231655034 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGAGCACACGTCTGAACTC | 223130 | 0.11211802045411963 | Illumina Multiplexing PCR Primer 2.01 (100% over 22bp) |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCTGGAGAGATGGCTCAG | 213125 | 0.10709072338674426 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 16250220 | 0.0 | 74.44774 | 1 |
| AGCAGTG | 16476465 | 0.0 | 73.394226 | 2 |
| AGTGGTA | 16550340 | 0.0 | 73.07167 | 5 |
| GTATCAA | 16661170 | 0.0 | 72.61203 | 9 |
| GCAGTGG | 16690415 | 0.0 | 72.44142 | 3 |
| TGGTATC | 16732020 | 0.0 | 72.2735 | 7 |
| GTGGTAT | 16745730 | 0.0 | 72.219925 | 6 |
| GGTATCA | 16748160 | 0.0 | 72.205956 | 8 |
| CAGTGGT | 16878455 | 0.0 | 71.6622 | 4 |
| GCGTAGA | 1272900 | 0.0 | 26.690113 | 55-59 |
| AGCGTAG | 1280450 | 0.0 | 26.641155 | 55-59 |
| AAATCGC | 1270810 | 0.0 | 26.506474 | 105-109 |
| AATCGCA | 1272340 | 0.0 | 26.464413 | 105-109 |
| GAAATCG | 1274830 | 0.0 | 26.333988 | 105-109 |
| AGCCCGA | 1288840 | 0.0 | 26.315857 | 95-99 |
| CAGCCCG | 1299045 | 0.0 | 26.223194 | 95-99 |
| GCAGCGA | 1280895 | 0.0 | 26.151447 | 40-44 |
| GGCATTC | 1299655 | 0.0 | 26.105999 | 30-34 |
| CGTGAGG | 1301170 | 0.0 | 26.071417 | 80-84 |
| TCGTGAG | 1291190 | 0.0 | 26.06804 | 80-84 |