Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR10540267_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 161058214 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 9148190 | 5.680051810334865 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1954985 | 1.2138375010168683 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1946458 | 1.2085431420467634 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1644997 | 1.0213679632632708 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG | 534389 | 0.33179866256309043 | Illumina Single End PCR Primer 1 (100% over 22bp) |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 454814 | 0.2823910614083924 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 253587 | 0.15745052282772737 | No Hit |
| CATGTACTCTGCGTTGATACCCATGTACTCTGCGTTGATACCACTGCTTC | 223153 | 0.13855424970750016 | No Hit |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 215960 | 0.13408816268135196 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGTTAGC | 139665 | 0.0 | 136.45488 | 2 |
| ATAGCGA | 104900 | 0.0 | 134.68092 | 1 |
| GATAGAC | 146930 | 0.0 | 134.26076 | 1 |
| GGCTAAC | 135735 | 0.0 | 133.90114 | 2 |
| CTCAATG | 166010 | 0.0 | 133.22997 | 1 |
| AGGCTAA | 136600 | 0.0 | 133.15294 | 1 |
| ATAGACA | 152690 | 0.0 | 132.63931 | 2 |
| AAGGACA | 296135 | 0.0 | 132.56755 | 1 |
| GATGTAC | 330505 | 0.0 | 132.49634 | 2 |
| ACGCTTA | 123580 | 0.0 | 132.3397 | 2 |
| AGATGTA | 331630 | 0.0 | 131.43787 | 1 |
| CAAGCTA | 101620 | 0.0 | 131.13876 | 2 |
| ACTAGTA | 190175 | 0.0 | 130.60155 | 2 |
| AGCTGAA | 142000 | 0.0 | 130.53426 | 2 |
| ATGAATC | 86665 | 0.0 | 129.82007 | 2 |
| TCAATGA | 167945 | 0.0 | 129.70322 | 2 |
| CAATGGA | 244320 | 0.0 | 129.65639 | 1 |
| ATGCCTA | 87860 | 0.0 | 129.54988 | 1 |
| CGAACTT | 86110 | 0.0 | 128.98648 | 1 |
| TAGCGAC | 109530 | 0.0 | 128.72964 | 2 |