Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR10540265_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 150463639 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 5952839 | 3.956330605562451 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 3249996 | 2.1599876366143187 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1593740 | 1.0592193639554337 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1186305 | 0.7884330113802445 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 503743 | 0.3347938434481171 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 308539 | 0.20505884481499215 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG | 286679 | 0.19053041778419302 | Illumina Single End PCR Primer 1 (100% over 22bp) |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 176078 | 0.1170236218997734 | No Hit |
| CATGTACTCTGCGTTGATACCCATGTACTCTGCGTTGATACCACTGCTTC | 165156 | 0.1097647252835617 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 151786 | 0.100878857515868 | Illumina Single End PCR Primer 1 (100% over 21bp) |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCAATG | 195960 | 0.0 | 133.30765 | 1 |
| ACGCTTA | 121715 | 0.0 | 132.15591 | 2 |
| GATAGAC | 116740 | 0.0 | 131.77313 | 1 |
| ATAGCGA | 85030 | 0.0 | 131.72166 | 1 |
| CTATGCA | 135260 | 0.0 | 131.35826 | 2 |
| AGTTAGC | 87650 | 0.0 | 131.17825 | 2 |
| TCAATGA | 198370 | 0.0 | 131.07016 | 2 |
| GATGTAC | 268325 | 0.0 | 130.55879 | 2 |
| AGATGTA | 267900 | 0.0 | 130.26549 | 1 |
| ATAGACA | 121065 | 0.0 | 130.15793 | 2 |
| CAATGGA | 245695 | 0.0 | 129.75674 | 1 |
| CGAACTT | 94880 | 0.0 | 128.74947 | 1 |
| AGCTGAA | 113795 | 0.0 | 128.36304 | 2 |
| GAACTTA | 94925 | 0.0 | 128.1525 | 2 |
| CATCAAG | 75210 | 0.0 | 128.10725 | 1 |
| CAAGCTA | 94885 | 0.0 | 127.95597 | 2 |
| GAGTCAA | 68250 | 0.0 | 127.58415 | 2 |
| TGGAACA | 110705 | 0.0 | 126.69175 | 1 |
| ACGTATC | 87120 | 0.0 | 126.0303 | 1 |
| AGAGTCA | 69805 | 0.0 | 125.637344 | 1 |