Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR10540274_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 116000742 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 51 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 5748689 | 4.9557346796971355 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1538145 | 1.3259785872748986 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1286934 | 1.1094187656144476 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1018660 | 0.8781495552847413 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 303255 | 0.26142505191906446 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG | 246848 | 0.21279863882249997 | Illumina Single End PCR Primer 1 (100% over 22bp) |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 235748 | 0.2032297345132499 | No Hit |
| CATGTACTCTGCGTTGATACCCATGTACTCTGCGTTGATACCACTGCTTC | 145426 | 0.12536643946639583 | No Hit |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 138440 | 0.1193440641957273 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATGTAC | 313280 | 0.0 | 137.49774 | 2 |
| CTGTAGC | 326590 | 0.0 | 135.09499 | 1 |
| CTCAATG | 165070 | 0.0 | 134.4274 | 1 |
| GATAGAC | 122085 | 0.0 | 133.65446 | 1 |
| AGTTAGC | 76410 | 0.0 | 133.22253 | 2 |
| CGAACTT | 78155 | 0.0 | 133.13138 | 1 |
| GAGTCAA | 92145 | 0.0 | 132.93639 | 2 |
| CAATGGA | 268605 | 0.0 | 132.92503 | 1 |
| AGAGTCA | 93460 | 0.0 | 132.58351 | 1 |
| CTATGCA | 116950 | 0.0 | 132.4495 | 2 |
| ACGCTTA | 84005 | 0.0 | 132.21648 | 2 |
| AGATGTA | 325845 | 0.0 | 132.18681 | 1 |
| TGTAGCC | 334520 | 0.0 | 131.80424 | 2 |
| TCAATGA | 167335 | 0.0 | 131.46767 | 2 |
| GGCTAAC | 89095 | 0.0 | 131.03871 | 2 |
| GTAGCCT | 109240 | 0.0 | 130.20477 | 3 |
| ATAGACA | 129855 | 0.0 | 130.20348 | 2 |
| AGGCTAA | 90255 | 0.0 | 130.03258 | 1 |
| TAAGGTC | 68640 | 0.0 | 129.88464 | 2 |
| GTAGCCG | 123935 | 0.0 | 129.77151 | 3 |