Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602592_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 99845834 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 10491793 | 10.507992752106214 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 544318 | 0.5451584489744459 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 343373 | 0.34390318177922174 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 204586 | 0.20490188904626708 | No Hit |
| NAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 157662 | 0.15790543649522723 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 152896 | 0.1531320775987509 | No Hit |
| AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA | 146292 | 0.14651788075604638 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 143290 | 0.1435112455468097 | No Hit |
| CAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGT | 125750 | 0.12594416307845152 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAAGCAGTGGTATCAACGCAG | 121861 | 0.12204915830539309 | No Hit |
| CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT | 119384 | 0.11956833371735871 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAATCCCAGCACTTTGGGAGG | 118071 | 0.1182533063923328 | No Hit |
| AGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTG | 111244 | 0.11141576522862237 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGTAAGCAGTGGTATCAACGCAG | 110478 | 0.11064858249368723 | No Hit |
| GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT | 104190 | 0.10435087356774446 | No Hit |
| GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTAC | 102764 | 0.10292267176615501 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 10026630 | 0.0 | 88.37136 | 1 |
| GTATCAA | 10496665 | 0.0 | 84.525215 | 9 |
| AGTGGTA | 10522925 | 0.0 | 84.28431 | 5 |
| GGTATCA | 10625310 | 0.0 | 83.4954 | 8 |
| AGCAGTG | 10648240 | 0.0 | 83.2941 | 2 |
| GTGGTAT | 10791235 | 0.0 | 82.19103 | 6 |
| TGGTATC | 10795300 | 0.0 | 82.16828 | 7 |
| CAGTGGT | 10795400 | 0.0 | 82.16566 | 4 |
| GCAGTGG | 10887945 | 0.0 | 81.45284 | 3 |
| ATGGGAT | 1058845 | 0.0 | 24.371483 | 25-29 |
| ATGGGGT | 495455 | 0.0 | 23.668522 | 25-29 |
| ATGGGAG | 1094650 | 0.0 | 22.862675 | 25-29 |
| ATGGGAC | 652780 | 0.0 | 22.764978 | 25-29 |
| ATGGGGG | 473345 | 0.0 | 22.558084 | 25-29 |
| ATGGGGC | 325350 | 0.0 | 21.845457 | 25-29 |
| CATGGGG | 1890435 | 0.0 | 21.135935 | 25-29 |
| AAACCGC | 77330 | 0.0 | 20.966803 | 85-89 |
| TGGGATA | 217090 | 0.0 | 20.791367 | 25-29 |
| GAAACCG | 79930 | 0.0 | 20.42529 | 85-89 |
| TGGGATT | 418265 | 0.0 | 20.380888 | 25-29 |