Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602568_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 95522124 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 6812514 | 7.131870308913984 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 668099 | 0.6994180740788386 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 156296 | 0.16362282731485325 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 139916 | 0.14647496741173804 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATAGGAAGCAGTGGTATCAACGCAG | 116379 | 0.12183460242152908 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 114188 | 0.11954089295585597 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 6557500 | 0.0 | 74.831764 | 1 |
| GTATCAA | 6799335 | 0.0 | 72.22767 | 9 |
| AGTGGTA | 6817030 | 0.0 | 71.997955 | 5 |
| GGTATCA | 6825650 | 0.0 | 71.93339 | 8 |
| TGGTATC | 6896715 | 0.0 | 71.1608 | 7 |
| GTGGTAT | 6900925 | 0.0 | 71.11401 | 6 |
| AGCAGTG | 6920070 | 0.0 | 70.907295 | 2 |
| CAGTGGT | 6954045 | 0.0 | 70.57966 | 4 |
| GCAGTGG | 7027265 | 0.0 | 69.8189 | 3 |
| GACGCGT | 10020 | 0.0 | 52.962925 | 1 |
| ACGATAC | 9265 | 0.0 | 47.614517 | 1 |
| GATCGTA | 11795 | 0.0 | 46.597343 | 1 |
| TACGGTA | 10810 | 0.0 | 45.725266 | 1 |
| GTAACGT | 12815 | 0.0 | 43.79736 | 1 |
| GCGCGAT | 9245 | 0.0 | 41.811886 | 1 |
| AGCGATA | 8870 | 0.0 | 41.55529 | 8 |
| TACGGAT | 12275 | 0.0 | 41.15761 | 1 |
| TCGCGAG | 13135 | 0.0 | 40.956852 | 1 |
| CGTCGAA | 5715 | 0.0 | 40.81249 | 7 |
| CCGGTAG | 15095 | 0.0 | 39.64157 | 1 |