Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602575_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 88683945 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 354192 | 0.39938683377244893 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 263129 | 0.29670421179391604 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTGCGATAGGAATCATGTC | 219554 | 0.24756904984323827 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 150439 | 0.16963498861039616 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACTGCGATAGGAATCATGT | 140182 | 0.1580691973051041 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 125007 | 0.1409578701082817 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 119364 | 0.13459482435067588 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 112783 | 0.12717408996634058 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCCTTTCCGGCGGTGACGACC | 100435 | 0.11325048744730513 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 3534910 | 0.0 | 134.1338 | 1 |
| GGTATCA | 3564310 | 0.0 | 133.04434 | 8 |
| GTGGTAT | 3566765 | 0.0 | 132.89323 | 6 |
| TGGTATC | 3572120 | 0.0 | 132.69423 | 7 |
| GTATCAA | 3585440 | 0.0 | 132.28697 | 9 |
| AGTGGTA | 3586160 | 0.0 | 132.18837 | 5 |
| AGCAGTG | 3609455 | 0.0 | 131.34146 | 2 |
| CAGTGGT | 3626180 | 0.0 | 130.74715 | 4 |
| GCAGTGG | 3697135 | 0.0 | 128.208 | 3 |
| CAACGCA | 3538285 | 0.0 | 27.167486 | 10-14 |
| TCAACGC | 3561565 | 0.0 | 26.96933 | 10-14 |
| TACATGG | 3444665 | 0.0 | 26.941336 | 20-24 |
| GTACATG | 3472555 | 0.0 | 26.926458 | 20-24 |
| ATCAACG | 3564320 | 0.0 | 26.921421 | 10-14 |
| CGCAGAG | 3566540 | 0.0 | 26.871101 | 15-19 |
| AACGCAG | 3577205 | 0.0 | 26.870453 | 10-14 |
| AGAGTAC | 3571295 | 0.0 | 26.861849 | 15-19 |
| ACATGGG | 3425600 | 0.0 | 26.81565 | 20-24 |
| CAGAGTA | 3579790 | 0.0 | 26.80482 | 15-19 |
| AGTACAT | 3556630 | 0.0 | 26.777092 | 20-24 |