Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602569_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 95652630 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 4328336 | 4.525056969160179 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 539122 | 0.5636248579887453 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 228975 | 0.23938181312944556 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 123555 | 0.1291705204551093 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 102846 | 0.1075203055054524 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 5326000 | 0.0 | 90.13985 | 1 |
| AGTGGTA | 5445865 | 0.0 | 88.131165 | 5 |
| AGCAGTG | 5492950 | 0.0 | 87.37211 | 2 |
| GTATCAA | 5512190 | 0.0 | 87.12719 | 9 |
| GGTATCA | 5525615 | 0.0 | 86.89571 | 8 |
| CAGTGGT | 5527280 | 0.0 | 86.839195 | 4 |
| GTGGTAT | 5537700 | 0.0 | 86.65715 | 6 |
| TGGTATC | 5538410 | 0.0 | 86.649414 | 7 |
| GCAGTGG | 5590420 | 0.0 | 85.84318 | 3 |
| CGATAGG | 29045 | 0.0 | 24.043577 | 35-39 |
| CATGGGG | 1073320 | 0.0 | 23.761833 | 25-29 |
| ATGGGAT | 536615 | 0.0 | 23.288998 | 25-29 |
| ATGGGGT | 244680 | 0.0 | 22.339664 | 25-29 |
| ATGGGAC | 327050 | 0.0 | 22.140217 | 25-29 |
| ATGGGAG | 570720 | 0.0 | 22.047922 | 25-29 |
| ATGGGGC | 317700 | 0.0 | 21.907076 | 25-29 |
| ATGGGGG | 330485 | 0.0 | 21.218624 | 25-29 |
| TACGCAC | 27250 | 0.0 | 20.591934 | 50-54 |
| CGACCTA | 27290 | 0.0 | 20.476704 | 45-49 |
| TGCGATA | 30510 | 0.0 | 20.043043 | 30-34 |