Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602574_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 97975788 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 579977 | 0.5919595155488824 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 452607 | 0.4619580094625011 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 227624 | 0.2323267866955048 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 217087 | 0.22157208881034973 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 207487 | 0.21177374965333273 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 157802 | 0.16106224121412527 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 117601 | 0.12003067533378757 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 101449 | 0.1035449697021064 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCCTTTCCGGCGGTGACGACC | 100217 | 0.10228751617695588 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 3845455 | 0.0 | 130.28223 | 1 |
| GTGGTAT | 3898455 | 0.0 | 128.50586 | 6 |
| GGTATCA | 3901950 | 0.0 | 128.44943 | 8 |
| TGGTATC | 3905845 | 0.0 | 128.26161 | 7 |
| GTATCAA | 3916655 | 0.0 | 128.0074 | 9 |
| AGTGGTA | 3929760 | 0.0 | 127.48729 | 5 |
| AGCAGTG | 3930740 | 0.0 | 127.45029 | 2 |
| CAGTGGT | 3956880 | 0.0 | 126.63477 | 4 |
| GCAGTGG | 4032755 | 0.0 | 124.22395 | 3 |
| CAACGCA | 3874655 | 0.0 | 26.233702 | 10-14 |
| CATGGGG | 1454140 | 0.0 | 26.200394 | 25-29 |
| ACATGGG | 3692175 | 0.0 | 26.112415 | 20-24 |
| GTACATG | 3785705 | 0.0 | 26.095942 | 20-24 |
| TACATGG | 3754415 | 0.0 | 26.092773 | 20-24 |
| AGAGTAC | 3892045 | 0.0 | 26.06531 | 15-19 |
| CAGAGTA | 3900005 | 0.0 | 26.018385 | 15-19 |
| TCAACGC | 3905390 | 0.0 | 26.00929 | 10-14 |
| ATCAACG | 3902450 | 0.0 | 25.99941 | 10-14 |
| AGTACAT | 3871060 | 0.0 | 25.995157 | 20-24 |
| GCAGAGT | 3910050 | 0.0 | 25.916525 | 15-19 |