Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602589_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 109314757 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 10210466 | 9.34042784360761 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAAAGCAAGCAGGAGACGTG | 2993854 | 2.7387464256083924 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 621119 | 0.5681931854818101 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 237475 | 0.21723965411184146 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 205726 | 0.18819599992341382 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGTAATGAAGAGCGTACGG | 204040 | 0.18665366470146388 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 190336 | 0.17411738837785642 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAAGCAGTGGTATCAACGCAG | 182876 | 0.16729305815499368 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGTAAGCAGTGGTATCAACGCAG | 178988 | 0.16373635629085284 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 170576 | 0.15604114639343708 | No Hit |
| NAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 153093 | 0.14004788026926684 | No Hit |
| AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA | 131914 | 0.12067355187918498 | No Hit |
| CAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGT | 120790 | 0.11049743265678211 | No Hit |
| CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT | 112302 | 0.10273269875173395 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 11318965 | 0.0 | 94.07411 | 1 |
| AGTGGTA | 11604575 | 0.0 | 91.82937 | 5 |
| AGCAGTG | 11609260 | 0.0 | 91.792725 | 2 |
| GTATCAA | 11693510 | 0.0 | 91.165085 | 9 |
| CAGTGGT | 11780405 | 0.0 | 90.46824 | 4 |
| GCAGTGG | 11853145 | 0.0 | 89.89229 | 3 |
| GGTATCA | 11870515 | 0.0 | 89.793335 | 8 |
| GTGGTAT | 11940060 | 0.0 | 89.25204 | 6 |
| TGGTATC | 11951270 | 0.0 | 89.175064 | 7 |
| CATGGGG | 2044195 | 0.0 | 25.210012 | 25-29 |
| ATGGGGT | 600810 | 0.0 | 24.385548 | 25-29 |
| CGGTCCT | 424255 | 0.0 | 23.763617 | 60-64 |
| GAGACGT | 435460 | 0.0 | 23.697416 | 40-44 |
| ATGGGGG | 602710 | 0.0 | 23.625048 | 25-29 |
| AAGACGC | 440595 | 0.0 | 23.448 | 70-74 |
| TGGGTAA | 472555 | 0.0 | 23.39312 | 25-29 |
| GTCCTAT | 425535 | 0.0 | 23.285654 | 60-64 |
| ACCCCGG | 439675 | 0.0 | 23.270111 | 55-59 |
| GGTCCTA | 434140 | 0.0 | 23.215906 | 60-64 |
| CCGGTCC | 431805 | 0.0 | 23.135653 | 60-64 |