Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602573_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 86405533 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 829421 | 0.9599165368264091 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 325900 | 0.37717492003666014 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 311216 | 0.36018063796909855 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 181947 | 0.21057332057658856 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 126455 | 0.14635058150732083 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 123895 | 0.14338780827843514 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 121995 | 0.1411888750226215 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 120070 | 0.13896100843449458 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 3692470 | 0.0 | 124.83322 | 1 |
| GGTATCA | 3751820 | 0.0 | 122.763176 | 8 |
| GTATCAA | 3760795 | 0.0 | 122.58907 | 9 |
| GTGGTAT | 3755815 | 0.0 | 122.57988 | 6 |
| TGGTATC | 3761910 | 0.0 | 122.38281 | 7 |
| AGCAGTG | 3770400 | 0.0 | 122.120476 | 2 |
| AGTGGTA | 3777175 | 0.0 | 121.905556 | 5 |
| CAGTGGT | 3794210 | 0.0 | 121.362976 | 4 |
| GCAGTGG | 3857665 | 0.0 | 119.35051 | 3 |
| CATGGGG | 956565 | 0.0 | 25.770678 | 25-29 |
| ACATGGG | 3431850 | 0.0 | 25.203392 | 20-24 |
| CAACGCA | 3728105 | 0.0 | 25.050138 | 10-14 |
| AGAGTAC | 3725735 | 0.0 | 24.97978 | 15-19 |
| CAGAGTA | 3734385 | 0.0 | 24.942894 | 15-19 |
| ATCAACG | 3745140 | 0.0 | 24.911633 | 10-14 |
| GTACATG | 3612900 | 0.0 | 24.90213 | 20-24 |
| AGTACAT | 3707640 | 0.0 | 24.901354 | 20-24 |
| TACATGG | 3560690 | 0.0 | 24.899664 | 20-24 |
| GCAGAGT | 3746320 | 0.0 | 24.827497 | 15-19 |
| CGCAGAG | 3749985 | 0.0 | 24.81575 | 15-19 |