Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602579_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 26427974 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 595795 | 2.254410421320984 | No Hit |
| CTGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 132348 | 0.5007875367215058 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 76669 | 0.29010547687083393 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 67494 | 0.2553884758627355 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 55225 | 0.20896418317953547 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATAGAC | 106600 | 0.0 | 143.96355 | 1 |
| CGCATAC | 145425 | 0.0 | 143.94722 | 1 |
| GCCACAT | 107210 | 0.0 | 141.52509 | 1 |
| ATTGAGG | 269675 | 0.0 | 141.3885 | 1 |
| GCATACA | 147975 | 0.0 | 141.32143 | 2 |
| CGAACTT | 69220 | 0.0 | 141.0878 | 1 |
| ACGTATC | 45180 | 0.0 | 140.92863 | 1 |
| ATAGACA | 109910 | 0.0 | 140.08644 | 2 |
| GACTAGT | 58015 | 0.0 | 139.51099 | 1 |
| AGATCGC | 82525 | 0.0 | 139.44043 | 1 |
| AACGTGA | 44655 | 0.0 | 139.35387 | 1 |
| GAACTTA | 70080 | 0.0 | 139.19966 | 2 |
| AGCAGGA | 91940 | 0.0 | 138.99277 | 1 |
| TTGAGGA | 274220 | 0.0 | 138.77968 | 2 |
| AAGGTAC | 55905 | 0.0 | 138.63112 | 1 |
| ACTAGTA | 58800 | 0.0 | 138.56276 | 2 |
| ACAGCAG | 94445 | 0.0 | 137.92004 | 1 |
| AACATCG | 46040 | 0.0 | 137.31158 | 2 |
| GATCGCA | 83255 | 0.0 | 137.18987 | 2 |
| AGGTACA | 56675 | 0.0 | 136.83812 | 2 |