Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602594_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 103487964 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 33 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1562564 | 1.5098992574634091 | No Hit |
| GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC | 502273 | 0.485344363330986 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 406570 | 0.3928669424784509 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 190209 | 0.18379818545855245 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 231140 | 0.0 | 144.06421 | 1 |
| GATAGAC | 231670 | 0.0 | 144.01901 | 1 |
| TATCAGC | 637875 | 0.0 | 143.94302 | 1 |
| TAGGATG | 591710 | 0.0 | 141.35219 | 1 |
| TAGCGAC | 237130 | 0.0 | 140.62923 | 2 |
| AGAGATC | 396695 | 0.0 | 140.14569 | 2 |
| ATCAGCA | 653270 | 0.0 | 140.00311 | 2 |
| GTCGTAG | 129950 | 0.0 | 139.9378 | 1 |
| GCGAGTA | 127045 | 0.0 | 139.41542 | 1 |
| GATGTAC | 270980 | 0.0 | 139.36444 | 2 |
| TCACGCA | 376950 | 0.0 | 138.91547 | 2 |
| GTGCGAA | 145890 | 0.0 | 137.02803 | 2 |
| ATAGACA | 243760 | 0.0 | 136.98445 | 2 |
| AGTTAGC | 159375 | 0.0 | 136.63403 | 2 |
| GCCACAT | 322910 | 0.0 | 136.48216 | 1 |
| AGGATGA | 611615 | 0.0 | 136.45363 | 2 |
| TTCACGC | 386025 | 0.0 | 136.26315 | 1 |
| GTCTGTC | 218160 | 0.0 | 135.8115 | 1 |
| GGAGAAC | 338620 | 0.0 | 135.72327 | 1 |
| TCAGCAG | 231085 | 0.0 | 135.64241 | 3 |