Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602571_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 95137476 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 695239 | 0.7307730131499389 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 435855 | 0.45813176712823456 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 279982 | 0.29429202010782796 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 217217 | 0.22831906955362155 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 189193 | 0.1988627488919298 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 159595 | 0.16775198030269375 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAACTCGGTGGTGGCCACTGC | 126467 | 0.1329307916472369 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 102523 | 0.10776300182695618 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTGCGATAGGAATCATGTC | 98740 | 0.10378665080414788 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 3702570 | 0.0 | 127.06679 | 1 |
| GGTATCA | 3753845 | 0.0 | 125.339294 | 8 |
| GTGGTAT | 3761270 | 0.0 | 125.037506 | 6 |
| TGGTATC | 3764690 | 0.0 | 124.92735 | 7 |
| AGTGGTA | 3769985 | 0.0 | 124.75438 | 5 |
| GTATCAA | 3772445 | 0.0 | 124.74936 | 9 |
| AGCAGTG | 3791520 | 0.0 | 124.06089 | 2 |
| CAGTGGT | 3814885 | 0.0 | 123.31516 | 4 |
| GCAGTGG | 3869070 | 0.0 | 121.560265 | 3 |
| CATGGGG | 1327155 | 0.0 | 25.79567 | 25-29 |
| ACATGGG | 3517465 | 0.0 | 25.603651 | 20-24 |
| CAACGCA | 3731715 | 0.0 | 25.590149 | 10-14 |
| AGAGTAC | 3738710 | 0.0 | 25.477285 | 15-19 |
| CAGAGTA | 3745900 | 0.0 | 25.434381 | 15-19 |
| GTACATG | 3643200 | 0.0 | 25.433653 | 20-24 |
| TACATGG | 3611580 | 0.0 | 25.421083 | 20-24 |
| ATCAACG | 3754700 | 0.0 | 25.383566 | 10-14 |
| AGTACAT | 3722470 | 0.0 | 25.381897 | 20-24 |
| TCAACGC | 3759425 | 0.0 | 25.381458 | 10-14 |
| AACGCAG | 3781710 | 0.0 | 25.25504 | 10-14 |