Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602568_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 95522124 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 33 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 5035652 | 5.271712760490963 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 404804 | 0.4237803589878299 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 305771 | 0.32010490051498436 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 211732 | 0.22165755024459044 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCTATGTACTCTGCGTTGATA | 131228 | 0.1373796922689868 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 98202 | 0.10280550294296219 | Illumina Single End PCR Primer 1 (100% over 21bp) |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 422000 | 0.0 | 144.12733 | 1 |
| TAGCGAC | 422300 | 0.0 | 142.71057 | 2 |
| CGACACA | 511355 | 0.0 | 141.71669 | 1 |
| GATGTAC | 846940 | 0.0 | 140.0958 | 2 |
| TCACGCA | 344655 | 0.0 | 139.75563 | 2 |
| AGATGTA | 849495 | 0.0 | 139.56815 | 1 |
| TTCACGC | 346205 | 0.0 | 139.38461 | 1 |
| CCGACAA | 205010 | 0.0 | 135.81812 | 1 |
| CACGCAT | 167355 | 0.0 | 135.69458 | 3 |
| AGTTAGC | 267380 | 0.0 | 135.21344 | 2 |
| ATGCCTA | 251275 | 0.0 | 135.13072 | 1 |
| AGCGACT | 208900 | 0.0 | 135.00587 | 3 |
| GCGACTA | 70795 | 0.0 | 134.68628 | 4 |
| GACACAC | 535065 | 0.0 | 134.63637 | 2 |
| GAGTTAG | 270995 | 0.0 | 134.13126 | 1 |
| AGCGACA | 148425 | 0.0 | 133.3067 | 3 |
| AACGTGA | 133330 | 0.0 | 132.97025 | 1 |
| AGCGACG | 92925 | 0.0 | 132.77344 | 3 |
| ACCTTAC | 245455 | 0.0 | 132.37909 | 2 |
| GGCTAAC | 174795 | 0.0 | 132.25478 | 2 |