Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602586_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 77218368 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 5626093 | 7.285951705169423 | No Hit |
| CAACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA | 1216535 | 1.5754476965894955 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1061718 | 1.3749552438093484 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 640119 | 0.8289724538078815 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 537604 | 0.6962125902479576 | No Hit |
| CTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTT | 183361 | 0.2374577509848434 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG | 181914 | 0.23558384450704786 | Illumina Single End PCR Primer 1 (100% over 22bp) |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 130229 | 0.1686502879729341 | No Hit |
| CATGTACTCTGCGTTGATACCCATGTACTCTGCGTTGATACCACTGCTTC | 125884 | 0.16302338842488875 | No Hit |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 124326 | 0.16100573376531346 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA | 115949 | 0.15015727864126835 | No Hit |
| CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT | 113682 | 0.14722144865843317 | No Hit |
| NATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 105182 | 0.13621370500863214 | No Hit |
| CAACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC | 90435 | 0.11711591729055967 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CAATGGA | 432555 | 0.0 | 136.24063 | 1 |
| ATGCCTA | 119065 | 0.0 | 133.47238 | 1 |
| AACGTGA | 174675 | 0.0 | 132.87148 | 1 |
| CAACCAC | 504990 | 0.0 | 132.22832 | 1 |
| CTCAATG | 133220 | 0.0 | 131.8788 | 1 |
| ACGTGAT | 174810 | 0.0 | 131.78526 | 2 |
| ACGCTTA | 112540 | 0.0 | 131.7494 | 2 |
| TGCCTAA | 118325 | 0.0 | 130.98593 | 2 |
| CGCATAC | 102225 | 0.0 | 127.69203 | 1 |
| TCAATGA | 139705 | 0.0 | 125.60928 | 2 |
| AATGGAA | 480375 | 0.0 | 123.024826 | 2 |
| AACATCG | 86530 | 0.0 | 122.05419 | 2 |
| AACCACA | 276760 | 0.0 | 121.145256 | 2 |
| CAAGCTA | 71690 | 0.0 | 120.94338 | 2 |
| GCCTAAT | 47385 | 0.0 | 120.14227 | 3 |
| AACGCTT | 126440 | 0.0 | 117.73738 | 1 |
| GCATACA | 109710 | 0.0 | 117.56445 | 2 |
| GATCGCA | 96725 | 0.0 | 116.58191 | 2 |
| ACAAGCT | 74680 | 0.0 | 116.507 | 1 |
| AACCACT | 280935 | 0.0 | 115.87699 | 2 |