Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602593_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 76818176 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAAAGCAAGCAGGAGACGTG | 4123896 | 5.368385732043417 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 3467029 | 4.513292531184286 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 329893 | 0.4294465414018682 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 324218 | 0.4220589668778389 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 203337 | 0.26469907330265174 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 148180 | 0.1928970560300729 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 134965 | 0.17569409614724515 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 100777 | 0.13118900401904884 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAGCAAGCAGGAGACGTG | 90691 | 0.11805929888259778 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 5639040 | 0.0 | 114.01998 | 1 |
| AGTGGTA | 5743185 | 0.0 | 111.90489 | 5 |
| AGCAGTG | 5764190 | 0.0 | 111.566765 | 2 |
| GTATCAA | 5791630 | 0.0 | 110.93148 | 9 |
| CAGTGGT | 5827345 | 0.0 | 110.37051 | 4 |
| GGTATCA | 5847385 | 0.0 | 109.92532 | 8 |
| GTGGTAT | 5851725 | 0.0 | 109.84228 | 6 |
| TGGTATC | 5857905 | 0.0 | 109.74761 | 7 |
| GCAGTGG | 5887670 | 0.0 | 109.23083 | 3 |
| TGACTGG | 53285 | 0.0 | 34.405308 | 2 |
| GTGACTG | 57205 | 0.0 | 31.938812 | 1 |
| GACTGGA | 59290 | 0.0 | 30.823519 | 3 |
| AGTTCAG | 62365 | 0.0 | 29.133482 | 9 |
| ACGTATC | 8115 | 0.0 | 25.840822 | 1 |
| CATGGGG | 1110560 | 0.0 | 25.619799 | 25-29 |
| ACTGGAG | 71205 | 0.0 | 25.60383 | 4 |
| GAGACGT | 567270 | 0.0 | 25.413383 | 40-44 |
| TGGAGTT | 72530 | 0.0 | 25.14011 | 6 |
| AAGACGC | 563560 | 0.0 | 25.040846 | 70-74 |
| CGGTCCT | 565675 | 0.0 | 24.989504 | 60-64 |