Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602578_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 78322547 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 452046 | 0.5771594736315202 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 199641 | 0.2548959496937708 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 167383 | 0.2137098529239607 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 105057 | 0.1341337890863023 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 79360 | 0.10132459047839698 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 1977850 | 0.0 | 124.940926 | 1 |
| GGTATCA | 1991200 | 0.0 | 124.06151 | 8 |
| GTGGTAT | 1994240 | 0.0 | 123.80163 | 6 |
| TGGTATC | 1996395 | 0.0 | 123.670525 | 7 |
| GTATCAA | 2000110 | 0.0 | 123.52936 | 9 |
| AGTGGTA | 2007825 | 0.0 | 122.96167 | 5 |
| AGCAGTG | 2029690 | 0.0 | 121.7046 | 2 |
| CAGTGGT | 2048750 | 0.0 | 120.548645 | 4 |
| GCAGTGG | 2099280 | 0.0 | 117.64751 | 3 |
| CAACGCA | 1971500 | 0.0 | 25.47401 | 10-14 |
| CATGGGG | 721505 | 0.0 | 25.34797 | 25-29 |
| TCAACGC | 1982750 | 0.0 | 25.306816 | 10-14 |
| ATCAACG | 1982605 | 0.0 | 25.271269 | 10-14 |
| AGAGTAC | 1979600 | 0.0 | 25.265703 | 15-19 |
| GTACATG | 1939200 | 0.0 | 25.189152 | 20-24 |
| CAGAGTA | 1990830 | 0.0 | 25.126076 | 15-19 |
| AGTACAT | 1973705 | 0.0 | 25.111917 | 20-24 |
| CGCAGAG | 1991315 | 0.0 | 25.100725 | 15-19 |
| TACATGG | 1934375 | 0.0 | 25.095827 | 20-24 |
| GAGTACA | 1967470 | 0.0 | 24.965816 | 20-24 |