Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602596_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 111048366 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 4644165 | 4.182110162701538 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 666412 | 0.6001096855400826 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 375623 | 0.33825171277171245 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 257278 | 0.2316810316686695 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 244925 | 0.22055704988941488 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 222394 | 0.20026769236748607 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 174072 | 0.1567533195400642 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGCAAAATAGTGGGAAGATT | 158959 | 0.1431439342385281 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAATCCCAGCACTTTGGGAGG | 125867 | 0.1133443062097825 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 8148810 | 0.0 | 116.83621 | 1 |
| GTATCAA | 8333580 | 0.0 | 114.188225 | 9 |
| GGTATCA | 8387730 | 0.0 | 113.513855 | 8 |
| AGTGGTA | 8392265 | 0.0 | 113.42357 | 5 |
| GTGGTAT | 8478410 | 0.0 | 112.30168 | 6 |
| TGGTATC | 8483435 | 0.0 | 112.25546 | 7 |
| AGCAGTG | 8515465 | 0.0 | 111.84634 | 2 |
| CAGTGGT | 8585255 | 0.0 | 110.95242 | 4 |
| GCAGTGG | 8657710 | 0.0 | 110.02012 | 3 |
| ATGGGAG | 1305695 | 0.0 | 25.882542 | 25-29 |
| TGACTGG | 82960 | 0.0 | 25.839758 | 2 |
| GTGACTG | 84355 | 0.0 | 25.422443 | 1 |
| ATGGGAT | 1303635 | 0.0 | 25.263224 | 25-29 |
| ATGGGAC | 726255 | 0.0 | 25.208696 | 25-29 |
| CATGGGG | 1747935 | 0.0 | 24.729939 | 25-29 |
| ATGGGGT | 473240 | 0.0 | 24.462645 | 25-29 |
| ATGGGGG | 512190 | 0.0 | 24.043535 | 25-29 |
| ACATGGG | 7894195 | 0.0 | 23.714573 | 20-24 |
| AGAGTAC | 8165275 | 0.0 | 23.558762 | 15-19 |
| TACATGG | 8072030 | 0.0 | 23.543978 | 20-24 |