Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602580_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 24899898 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 163547 | 0.6568179516237376 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 144580 | 0.5806449488266979 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAAAGCAAGCAGGAGACGTG | 89440 | 0.3591982585631475 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 74786 | 0.3003466118616229 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 39600 | 0.1590367960543453 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 37652 | 0.1512134708342982 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 29173 | 0.11716112250740947 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 697550 | 0.0 | 124.08131 | 1 |
| GGTATCA | 698980 | 0.0 | 123.5445 | 8 |
| GTGGTAT | 698210 | 0.0 | 123.53462 | 6 |
| TGGTATC | 699020 | 0.0 | 123.40795 | 7 |
| GTATCAA | 703860 | 0.0 | 122.73003 | 9 |
| AGTGGTA | 705160 | 0.0 | 122.31605 | 5 |
| AGCAGTG | 709990 | 0.0 | 121.87217 | 2 |
| CAGTGGT | 713930 | 0.0 | 121.18032 | 4 |
| GCAGTGG | 726585 | 0.0 | 119.07566 | 3 |
| CAACGCA | 697530 | 0.0 | 25.279669 | 10-14 |
| TCAACGC | 699675 | 0.0 | 25.1748 | 10-14 |
| ATCAACG | 698310 | 0.0 | 25.12937 | 10-14 |
| GTACATG | 671950 | 0.0 | 25.080269 | 20-24 |
| AGAGTAC | 697905 | 0.0 | 25.068304 | 15-19 |
| TACATGG | 663535 | 0.0 | 25.012096 | 20-24 |
| CGCAGAG | 702850 | 0.0 | 25.001734 | 15-19 |
| AGTACAT | 692850 | 0.0 | 24.985798 | 20-24 |
| CAGAGTA | 701455 | 0.0 | 24.966478 | 15-19 |
| AACGCAG | 709230 | 0.0 | 24.871977 | 10-14 |
| GCAGAGT | 705780 | 0.0 | 24.848166 | 15-19 |