Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602595_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 109390700 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAAAGCAAGCAGGAGACGTG | 4870399 | 4.452297133120092 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 1877369 | 1.7162053081294846 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 509598 | 0.4658513018017071 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 261080 | 0.23866745527727679 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 199715 | 0.18257036475678462 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 170142 | 0.15553607390756252 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGCAAAATAGTGGGAAGATT | 146971 | 0.1343542001285301 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 146081 | 0.1335406026289255 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAATCCCAGCACTTTGGGAGG | 143004 | 0.1307277492510789 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAGCAAGCAGGAGACGTG | 141111 | 0.1289972547940547 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 7349420 | 0.0 | 131.02823 | 1 |
| AGTGGTA | 7464395 | 0.0 | 128.98528 | 5 |
| GTATCAA | 7482115 | 0.0 | 128.65889 | 9 |
| AGCAGTG | 7490435 | 0.0 | 128.62108 | 2 |
| GTGGTAT | 7501555 | 0.0 | 128.36743 | 6 |
| GGTATCA | 7510285 | 0.0 | 128.23679 | 8 |
| TGGTATC | 7516675 | 0.0 | 128.13286 | 7 |
| CAGTGGT | 7542935 | 0.0 | 127.729385 | 4 |
| GCAGTGG | 7600465 | 0.0 | 126.762955 | 3 |
| ACGTATC | 12115 | 0.0 | 36.004875 | 1 |
| CATGGGG | 1743760 | 0.0 | 26.793625 | 25-29 |
| TGACTGG | 82470 | 0.0 | 26.281204 | 2 |
| AGAGTAC | 7416730 | 0.0 | 26.198483 | 15-19 |
| ATGGGAG | 1179555 | 0.0 | 26.18309 | 25-29 |
| CAGAGTA | 7425950 | 0.0 | 26.180767 | 15-19 |
| CAACGCA | 7470065 | 0.0 | 26.119793 | 10-14 |
| AGTACAT | 7397970 | 0.0 | 26.11766 | 20-24 |
| GCAGAGT | 7449705 | 0.0 | 26.08045 | 15-19 |
| GAGACGT | 658150 | 0.0 | 26.078005 | 40-44 |
| TACATGG | 7382010 | 0.0 | 26.041874 | 20-24 |