Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602584_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 33403684 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 136317 | 0.40808971848733816 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 42141 | 0.12615674366935095 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 33611 | 0.10062063813081215 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 1263535 | 0.0 | 138.09442 | 1 |
| GTGGTAT | 1265560 | 0.0 | 137.91911 | 6 |
| GGTATCA | 1267680 | 0.0 | 137.80913 | 8 |
| TGGTATC | 1270670 | 0.0 | 137.39285 | 7 |
| GTATCAA | 1273660 | 0.0 | 137.19771 | 9 |
| AGTGGTA | 1273165 | 0.0 | 137.09209 | 5 |
| AGCAGTG | 1283150 | 0.0 | 135.89415 | 2 |
| CAGTGGT | 1290235 | 0.0 | 135.28671 | 4 |
| GCAGTGG | 1295440 | 0.0 | 134.58015 | 3 |
| CAACGCA | 1260435 | 0.0 | 28.22816 | 10-14 |
| TCAACGC | 1260770 | 0.0 | 28.194046 | 10-14 |
| AACGCAG | 1269635 | 0.0 | 28.017717 | 10-14 |
| ATCAACG | 1268510 | 0.0 | 27.9958 | 10-14 |
| CGCAGAG | 1267370 | 0.0 | 27.990553 | 15-19 |
| TACATGG | 1229020 | 0.0 | 27.916225 | 20-24 |
| GTACATG | 1237270 | 0.0 | 27.905931 | 20-24 |
| AGAGTAC | 1270330 | 0.0 | 27.843607 | 15-19 |
| CAGAGTA | 1272925 | 0.0 | 27.79567 | 15-19 |
| AGTACAT | 1265715 | 0.0 | 27.746126 | 20-24 |
| GCAGAGT | 1274115 | 0.0 | 27.73309 | 15-19 |