Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602585_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 28326402 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 578689 | 2.04293153786351 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 189551 | 0.6691672313342161 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 60357 | 0.21307683199581787 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 1371130 | 0.0 | 113.97721 | 1 |
| AGTGGTA | 1391830 | 0.0 | 112.323364 | 5 |
| GTGGTAT | 1394040 | 0.0 | 112.13736 | 6 |
| TGGTATC | 1396680 | 0.0 | 111.95434 | 7 |
| GGTATCA | 1398410 | 0.0 | 111.88717 | 8 |
| AGCAGTG | 1398120 | 0.0 | 111.688385 | 2 |
| CAGTGGT | 1403330 | 0.0 | 111.41008 | 4 |
| GTATCAA | 1405135 | 0.0 | 111.37832 | 9 |
| GCAGTGG | 1419290 | 0.0 | 110.00821 | 3 |
| CATGGGG | 348360 | 0.0 | 25.994999 | 25-29 |
| ATGGGAT | 207570 | 0.0 | 25.371397 | 25-29 |
| ATGGGGT | 97495 | 0.0 | 24.54773 | 25-29 |
| ATGGGAG | 172815 | 0.0 | 24.399754 | 25-29 |
| ATGGGAC | 132185 | 0.0 | 23.893082 | 25-29 |
| ATGGGGG | 116090 | 0.0 | 23.457361 | 25-29 |
| TACATGG | 1328430 | 0.0 | 23.071886 | 20-24 |
| AGTACAT | 1365175 | 0.0 | 23.007895 | 20-24 |
| GTACATG | 1342460 | 0.0 | 22.98275 | 20-24 |
| ACATGGG | 1326355 | 0.0 | 22.970541 | 20-24 |
| AGAGTAC | 1381135 | 0.0 | 22.94557 | 15-19 |