Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR9602590_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 102457193 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 772633 | 0.7541032282623632 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 499320 | 0.4873449929474449 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 406050 | 0.3963118528925539 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 193052 | 0.18842210522007957 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 191298 | 0.186710170753946 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 178933 | 0.17464171597986294 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAATCCCAGCACTTTGGGAGG | 165919 | 0.16193982593296305 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 161909 | 0.15802599628119815 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 133130 | 0.1299371924038559 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 114896 | 0.11214049168807505 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGCAAAATAGTGGGAAGATT | 109973 | 0.10733555817794072 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 6689680 | 0.0 | 138.06805 | 1 |
| AGTGGTA | 6828775 | 0.0 | 135.34464 | 5 |
| GGTATCA | 6836610 | 0.0 | 135.23524 | 8 |
| GTATCAA | 6840775 | 0.0 | 135.17395 | 9 |
| TGGTATC | 6841715 | 0.0 | 135.10706 | 7 |
| GTGGTAT | 6841780 | 0.0 | 135.09337 | 6 |
| AGCAGTG | 6849405 | 0.0 | 134.92758 | 2 |
| CAGTGGT | 6869735 | 0.0 | 134.5543 | 4 |
| GCAGTGG | 6920800 | 0.0 | 133.52937 | 3 |
| CAACGCA | 6810220 | 0.0 | 27.446526 | 10-14 |
| ATCAACG | 6820665 | 0.0 | 27.371445 | 10-14 |
| AGAGTAC | 6821705 | 0.0 | 27.342173 | 15-19 |
| AACGCAG | 6836420 | 0.0 | 27.330389 | 10-14 |
| CAGAGTA | 6834925 | 0.0 | 27.308619 | 15-19 |
| CGCAGAG | 6826450 | 0.0 | 27.306404 | 15-19 |
| TCAACGC | 6843385 | 0.0 | 27.304466 | 10-14 |
| TACATGG | 6791780 | 0.0 | 27.295582 | 20-24 |
| AGTACAT | 6812465 | 0.0 | 27.291193 | 20-24 |
| GTACATG | 6806540 | 0.0 | 27.278896 | 20-24 |
| GCAGAGT | 6842395 | 0.0 | 27.25026 | 15-19 |