Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868833_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 26586396 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 51 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG | 152448 | 0.5734060381858451 | No Hit |
| GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGC | 97517 | 0.36679285150194857 | No Hit |
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 93046 | 0.3499759801967894 | No Hit |
| CTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCC | 27398 | 0.10305270409723831 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGTGGC | 27155 | 0.0 | 22.658056 | 1 |
| CGCAAAA | 4180 | 0.0 | 16.866676 | 1 |
| TGGCGCG | 41035 | 0.0 | 15.085878 | 4 |
| GTGGCGC | 41170 | 0.0 | 15.081376 | 3 |
| GGCGCGT | 41790 | 0.0 | 14.835884 | 5 |
| GGTGGCG | 42320 | 0.0 | 14.763753 | 2 |
| CGTGTAG | 3395 | 0.0 | 14.548585 | 36 |
| TACCGTA | 8245 | 0.0 | 14.225766 | 9 |
| CGTGCCT | 43800 | 0.0 | 14.166612 | 9 |
| TAGTCCC | 44495 | 0.0 | 13.894629 | 17 |
| GCGCGTG | 45050 | 0.0 | 13.865025 | 6 |
| GTAGTCC | 44690 | 0.0 | 13.863108 | 16 |
| CTACCGT | 8525 | 0.0 | 13.780097 | 8 |
| TGTAGTC | 45095 | 0.0 | 13.726425 | 15 |
| CCGTATG | 8590 | 0.0 | 13.697567 | 11 |
| CGTATGG | 8605 | 0.0 | 13.694802 | 12 |
| CGCGTGC | 45840 | 0.0 | 13.560121 | 7 |
| GCGTGCC | 46030 | 0.0 | 13.544466 | 8 |
| CCTGTAG | 46130 | 0.0 | 13.51079 | 13 |
| ACTACCG | 8765 | 0.0 | 13.487077 | 7 |