Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868832_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 26559810 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 729417 | 2.7463185918875173 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 263728 | 0.9929589104741336 | No Hit |
| CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG | 180959 | 0.681326410091036 | No Hit |
| GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGC | 124421 | 0.46845591139394444 | No Hit |
| CTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCC | 66010 | 0.2485334044181792 | No Hit |
| ACTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTC | 40952 | 0.1541878499883847 | No Hit |
| GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGT | 38115 | 0.14350629767306317 | No Hit |
| GTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGA | 34218 | 0.12883375295229899 | No Hit |
| TGCAGCGCAAGTAGGTCTACAAGACGCTACTTCCCCTATCATA | 31865 | 0.11997450282965126 | No Hit |
| CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGC | 27933 | 0.10517018005776398 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGTGGC | 25945 | 0.0 | 28.786526 | 1 |
| CGTGTAG | 8500 | 0.0 | 20.893204 | 36 |
| TGCAGCG | 7360 | 0.0 | 19.28454 | 1 |
| AGCGCAA | 7360 | 0.0 | 19.104656 | 4 |
| CGCAAGT | 7415 | 0.0 | 18.714106 | 6 |
| ACTAAAT | 9150 | 0.0 | 18.464666 | 1 |
| CAGCGCA | 8550 | 0.0 | 18.046898 | 3 |
| ACGTGTA | 10135 | 0.0 | 17.504448 | 35 |
| GTGTAGA | 10200 | 0.0 | 17.465479 | 37 |
| GGTGGCG | 44980 | 0.0 | 16.831882 | 2 |
| GCGCAAG | 8470 | 0.0 | 16.819918 | 5 |
| GCAGCGC | 8655 | 0.0 | 16.759672 | 2 |
| CGACCGT | 2855 | 0.0 | 16.463394 | 1 |
| GTGGCGC | 46195 | 0.0 | 16.332582 | 3 |
| TGGCGCG | 46320 | 0.0 | 16.248594 | 4 |
| AACGTGT | 10885 | 0.0 | 16.179419 | 34 |
| GTAGGTC | 8735 | 0.0 | 15.969203 | 11 |
| GCAAGTA | 8910 | 0.0 | 15.759192 | 7 |
| GGCGCGT | 48135 | 0.0 | 15.644077 | 5 |
| CTAAATA | 16665 | 0.0 | 15.368184 | 1 |