Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868832_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 26559810 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 934833 | 3.5197277390162056 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 771494 | 2.904742164947716 | No Hit |
| GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 188101 | 0.7082166626944997 | No Hit |
| CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTC | 99301 | 0.37387692155930335 | No Hit |
| CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCA | 69295 | 0.2609017157878765 | No Hit |
| GGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTTTGGTTC | 64592 | 0.24319451080410592 | No Hit |
| CTCCCCAATACGGAGAGAAGAACGATCATCAATGGCTGACGGC | 58336 | 0.21964012543764433 | No Hit |
| CACTCCCCAATACGGAGAGAAGAACGATCATCAATGGCTGACG | 54271 | 0.20433504607148922 | No Hit |
| GGGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTTTGGTT | 33812 | 0.12730512755927093 | No Hit |
| GTGGGGGGCATCCATATAGTCACTCCAGGTTTATGGAGGGTTC | 32831 | 0.12361157704064903 | No Hit |
| CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 26765 | 0.10077255823742716 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TGACGGC | 8960 | 0.0 | 26.599556 | 37 |
| CTGACGG | 10745 | 0.0 | 22.404442 | 36 |
| GCGTCAG | 3750 | 0.0 | 19.885674 | 37 |
| ACGTTCG | 950 | 0.0 | 17.135159 | 6 |
| CACTCCC | 13485 | 0.0 | 16.789837 | 1 |
| CAATCGG | 1815 | 0.0 | 16.307554 | 9 |
| TATGGCG | 4740 | 0.0 | 15.926988 | 33 |
| GGGGCAA | 18305 | 0.0 | 15.632792 | 1 |
| CGGAGCG | 3925 | 0.0 | 15.604298 | 34 |
| AGCGGGT | 4105 | 0.0 | 15.23597 | 37 |
| TCGACCG | 600 | 0.0 | 15.108585 | 28 |
| CGTCTGA | 7430 | 0.0 | 14.992393 | 36 |
| CGATTGA | 2840 | 0.0 | 14.720053 | 4 |
| TACGTTC | 1660 | 0.0 | 14.711226 | 27 |
| GGCGTCA | 5085 | 0.0 | 14.628451 | 36 |
| ATATCGG | 3710 | 0.0 | 14.459278 | 13 |
| GGAGGTC | 32750 | 0.0 | 14.289074 | 37 |
| GAGGTCA | 21900 | 0.0 | 14.211778 | 37 |
| CCTACGT | 1720 | 0.0 | 14.198688 | 25 |
| GCTGACG | 17065 | 0.0 | 14.085195 | 35 |