Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868829_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 21840260 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 187915 | 0.8604064237330508 | No Hit |
| CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG | 101299 | 0.4638177384335168 | No Hit |
| GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGC | 81487 | 0.3731045326383477 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 54587 | 0.24993750074403875 | No Hit |
| CTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCC | 43712 | 0.20014413747821685 | No Hit |
| GTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGA | 37200 | 0.17032764261963915 | No Hit |
| GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGT | 23384 | 0.10706832244671079 | No Hit |
| CGTTTTTTCACTGACCCGGTGAGGCGGGGGGGCGAGCCCCGAG | 22728 | 0.10406469520051502 | No Hit |
| ACTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTC | 22177 | 0.10154183146171337 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGTGGC | 17230 | 0.0 | 25.743309 | 1 |
| CGTGTAG | 10720 | 0.0 | 18.206144 | 36 |
| CGCAAAA | 5265 | 0.0 | 17.713884 | 1 |
| CGACCGT | 2275 | 0.0 | 16.51187 | 1 |
| ACGTGTA | 12195 | 0.0 | 15.958689 | 35 |
| GTGTAGA | 12075 | 0.0 | 15.948613 | 37 |
| ACCGTTG | 2405 | 0.0 | 15.539013 | 3 |
| CTAAATA | 11820 | 0.0 | 15.483191 | 1 |
| AACGTGT | 12735 | 0.0 | 15.209397 | 34 |
| GACCGTT | 2485 | 0.0 | 15.187801 | 2 |
| GGTGGCG | 29745 | 0.0 | 15.095481 | 2 |
| ACTAAAT | 6145 | 0.0 | 15.086811 | 1 |
| CTACCGT | 12360 | 0.0 | 14.7722645 | 8 |
| ACTACCG | 12430 | 0.0 | 14.748637 | 7 |
| TACCGTA | 12365 | 0.0 | 14.73647 | 9 |
| GTGGCGC | 30590 | 0.0 | 14.617878 | 3 |
| TGGCGCG | 30650 | 0.0 | 14.595198 | 4 |
| TAAATAC | 12550 | 0.0 | 14.579537 | 2 |
| ACCGTAT | 12790 | 0.0 | 14.087721 | 10 |
| CGCAAGT | 4020 | 0.0 | 14.082396 | 6 |