Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868827_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 8065218 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 125221 | 1.552605273657823 | No Hit |
| GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 39413 | 0.4886786693180519 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 35481 | 0.43992611235058987 | No Hit |
| GGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTTTGGTTC | 18867 | 0.23393044056589668 | No Hit |
| CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTC | 17549 | 0.21758866282349715 | No Hit |
| GGGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTTTGGTT | 11180 | 0.13861993562976227 | No Hit |
| CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCA | 10686 | 0.13249486870658675 | No Hit |
| GTGGGGGGCATCCATATAGTCACTCCAGGTTTATGGAGGGTTC | 8931 | 0.1107347625321473 | No Hit |
| GGGGGAAGTATGTAGGAGTTGAAGATTAGTCCGCCGTAGTCGG | 8854 | 0.10978004562306934 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGAGCGT | 630 | 0.0 | 18.498653 | 9 |
| GATCGGA | 650 | 0.0 | 18.494867 | 2 |
| CGATTGA | 1510 | 0.0 | 18.128881 | 4 |
| AAGAGCG | 675 | 0.0 | 17.5399 | 8 |
| AGATCGG | 690 | 0.0 | 17.15732 | 1 |
| GCGTCGT | 710 | 0.0 | 16.934757 | 12 |
| CAATCGG | 800 | 0.0 | 16.880022 | 9 |
| GCGTCAG | 1800 | 0.0 | 16.75842 | 37 |
| CGTCGTG | 720 | 0.0 | 16.442432 | 13 |
| ACGTATA | 405 | 0.0 | 15.990358 | 32 |
| CGTCAAG | 880 | 0.0 | 15.981166 | 36 |
| AGCGTCG | 775 | 0.0 | 15.753106 | 11 |
| ACCGACG | 825 | 0.0 | 15.702255 | 37 |
| ATCGGGA | 900 | 0.0 | 15.620503 | 11 |
| ACGTCAA | 880 | 0.0 | 15.560415 | 35 |
| CGGTTGA | 1755 | 0.0 | 15.495751 | 19 |
| CGCCGTA | 2250 | 0.0 | 15.460393 | 32 |
| TCGATTG | 875 | 0.0 | 15.435749 | 25 |
| CAACGTC | 915 | 0.0 | 15.369483 | 33 |
| GTCAACG | 880 | 0.0 | 15.347949 | 31 |