Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868833_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 26586396 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 525963 | 1.9783162787464688 | No Hit |
| GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 185695 | 0.6984587155024697 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 84178 | 0.3166205754251159 | No Hit |
| CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTC | 74871 | 0.28161395023229174 | No Hit |
| CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCA | 52218 | 0.1964087197076279 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGCTAA | 1150 | 0.0 | 15.119619 | 4 |
| CGCTAAG | 1275 | 0.0 | 13.057066 | 5 |
| GGAGGTC | 27565 | 0.0 | 13.023651 | 37 |
| AGCGGGT | 7585 | 0.0 | 12.979115 | 37 |
| GTCAAAC | 8090 | 0.0 | 12.438983 | 7 |
| GTCCCCG | 8715 | 0.0 | 11.846265 | 29 |
| CAGTCAA | 8425 | 0.0 | 11.81206 | 5 |
| ACTGTCC | 8725 | 0.0 | 11.768848 | 26 |
| CGTACGA | 1385 | 0.0 | 11.753108 | 15 |
| CGGAGCG | 8790 | 0.0 | 11.557012 | 34 |
| TGACGGC | 5920 | 0.0 | 11.4718485 | 37 |
| GTCCCCC | 31960 | 0.0 | 11.380709 | 23 |
| CAATACG | 6125 | 0.0 | 11.265243 | 8 |
| CGCTCCC | 32330 | 0.0 | 11.239589 | 29 |
| TCCCCCG | 32620 | 0.0 | 11.21882 | 24 |
| CCCGGGA | 32290 | 0.0 | 11.202954 | 33 |
| CCCCGCT | 32545 | 0.0 | 11.148071 | 26 |
| GAGGTCA | 19705 | 0.0 | 11.118963 | 37 |
| ACCGCTA | 1415 | 0.0 | 11.111161 | 3 |
| TCCCGGG | 32500 | 0.0 | 11.1018915 | 32 |