Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868838_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 17928528 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGGTC | 277275 | 1.5465575311035016 | No Hit |
| GCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGGT | 264253 | 1.47392468584147 | No Hit |
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 171715 | 0.9577752283957723 | No Hit |
| GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 97227 | 0.5423033056590034 | No Hit |
| CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTC | 85445 | 0.4765868118118788 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 71792 | 0.4004344361121002 | No Hit |
| CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCA | 69865 | 0.38968620290522454 | No Hit |
| CCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGGTCG | 46510 | 0.25941895508655255 | No Hit |
| CGCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGG | 44240 | 0.24675756983506955 | No Hit |
| CCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACCG | 42138 | 0.2350332386462514 | No Hit |
| CCCCGGGGCTCCCGCCGGCTTCTCCGGGATCGGTCGCGTTACC | 35407 | 0.19748972140936502 | No Hit |
| GGCAGACGTTCGAATGGGTCGTCGCCGCCACGGGGGGCGTGCG | 30025 | 0.167470525187567 | No Hit |
| CCCGTGTGGTTGGTGCGCGGACACGCACTGCCTGCGTAACTAG | 28909 | 0.16124580891415066 | No Hit |
| CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACC | 28213 | 0.1573637277973964 | No Hit |
| CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCAC | 23369 | 0.13034533565722742 | No Hit |
| GCCCCGTGTGGTTGGTGCGCGGACACGCACTGCCTGCGTAACT | 23135 | 0.1290401532128014 | No Hit |
| CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAAT | 19774 | 0.11029349425675103 | No Hit |
| CGGGGGTCTTAGCTTTGGCTCTCCTTGCAAAGTTATTTCTAGT | 19289 | 0.10758830842108175 | No Hit |
| CTGGGGTCTGATGAGCGTCGGCATCGGGCGCCTTAACCCGGCG | 18505 | 0.10321538946197927 | No Hit |
| GGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTTTGGTTC | 18388 | 0.10256279823976625 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCCCCAG | 39840 | 0.0 | 27.221249 | 1 |
| GCGGGTC | 48445 | 0.0 | 23.81024 | 37 |
| ACCGACG | 2330 | 0.0 | 23.343594 | 37 |
| ACACCGA | 2330 | 0.0 | 22.788176 | 35 |
| GCGTGCG | 5680 | 0.0 | 21.920126 | 37 |
| CGCCCCA | 8555 | 0.0 | 21.506138 | 1 |
| AAACCGC | 2505 | 0.0 | 20.977375 | 18 |
| CCGCTAA | 2215 | 0.0 | 20.371487 | 4 |
| CAAACCG | 2650 | 0.0 | 20.177769 | 17 |
| ACCGCTA | 2215 | 0.0 | 20.119558 | 3 |
| ATATCGG | 2950 | 0.0 | 19.378494 | 13 |
| CGCTAAG | 2335 | 0.0 | 19.324987 | 5 |
| ACGTTCG | 6460 | 0.0 | 18.866434 | 6 |
| GCCCCGT | 5675 | 0.0 | 18.800495 | 1 |
| TCGTACG | 2365 | 0.0 | 18.774664 | 14 |
| TACGTTC | 3965 | 0.0 | 18.760902 | 27 |
| CATATCG | 3070 | 0.0 | 18.499523 | 12 |
| CAATCGG | 1610 | 0.0 | 18.497305 | 9 |
| TCAATCG | 1800 | 0.0 | 18.291063 | 8 |
| CGTTCGA | 6675 | 0.0 | 18.28763 | 7 |