Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868837_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 21288359 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 228210 | 1.0719943232825038 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 50079 | 0.23524124146910527 | No Hit |
| CGTTTTTTCACTGACCCGGTGAGGCGGGGGGGCGAGCCCCGAG | 43364 | 0.20369818077569998 | No Hit |
| CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG | 38909 | 0.18277125071030606 | No Hit |
| CCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAA | 26454 | 0.1242650971829252 | No Hit |
| GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGC | 23839 | 0.11198138851378822 | No Hit |
| CCTAGCCTTTCTATTAGCTCTTAGTAAGATTACACATGCAAGC | 21534 | 0.10115387475380323 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGTCGG | 5105 | 0.0 | 20.802242 | 2 |
| CCCGTCG | 5420 | 0.0 | 19.838722 | 1 |
| CGGTGGC | 8810 | 0.0 | 19.074219 | 1 |
| CGGCATG | 5970 | 0.0 | 17.788517 | 6 |
| CGTCGGC | 6365 | 0.0 | 16.742296 | 3 |
| TGGCGCG | 10160 | 0.0 | 16.37008 | 4 |
| CGACCGT | 745 | 0.0 | 16.147076 | 1 |
| GGCGCGT | 10755 | 0.0 | 15.481893 | 5 |
| GGTGGCG | 10960 | 0.0 | 15.41183 | 2 |
| GTGGCGC | 10955 | 0.0 | 15.28365 | 3 |
| GCTCTAG | 7430 | 0.0 | 14.465632 | 18 |
| GTCGGCA | 7675 | 0.0 | 14.197822 | 4 |
| GCCCCGA | 12215 | 0.0 | 14.191351 | 36 |
| GTTATCC | 7710 | 0.0 | 14.108877 | 35 |
| CCCCGAG | 12405 | 0.0 | 14.078585 | 37 |
| CGAGCCC | 12540 | 0.0 | 13.675574 | 33 |
| TCGTTCG | 3575 | 0.0 | 13.661918 | 37 |
| GACCGTT | 955 | 0.0 | 13.367177 | 2 |
| GCGCGTG | 12505 | 0.0 | 13.359992 | 6 |
| GTATTAG | 8105 | 0.0 | 13.283887 | 12 |