Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868830_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 22039643 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 432487 | 1.9623139993692276 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 232420 | 1.054554286564442 | No Hit |
| GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 99492 | 0.4514229200536506 | No Hit |
| CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTC | 93395 | 0.42375913257760117 | No Hit |
| CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCA | 62320 | 0.2827632008376905 | No Hit |
| CTCCCCAATACGGAGAGAAGAACGATCATCAATGGCTGACGGC | 46808 | 0.21238093557141555 | No Hit |
| CACTCCCCAATACGGAGAGAAGAACGATCATCAATGGCTGACG | 45956 | 0.20851517422491828 | No Hit |
| GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAAC | 40804 | 0.18513911500290636 | No Hit |
| GGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTTTGGTTC | 40041 | 0.18167717144964643 | No Hit |
| CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACC | 32998 | 0.14972111844098382 | No Hit |
| CTGCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCA | 27551 | 0.1250065620391401 | No Hit |
| ACCTGCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGG | 26662 | 0.12097292138534185 | No Hit |
| GTGGGGGGCATCCATATAGTCACTCCAGGTTTATGGAGGGTTC | 24607 | 0.11164881391227616 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TGACGGC | 7730 | 0.0 | 23.794195 | 37 |
| CTGACGG | 9170 | 0.0 | 20.238943 | 36 |
| GCGTCGT | 1310 | 0.0 | 16.945667 | 12 |
| TACGTTC | 2080 | 0.0 | 16.45495 | 27 |
| CCCTACG | 2180 | 0.0 | 16.040802 | 24 |
| AGAGCGT | 1420 | 0.0 | 15.7631445 | 9 |
| CTACGTT | 2190 | 0.0 | 15.713745 | 26 |
| CACTCCC | 11940 | 0.0 | 15.660366 | 1 |
| ACGTTCG | 1285 | 0.0 | 15.40291 | 6 |
| CAATCGG | 1855 | 0.0 | 15.3575735 | 9 |
| CCTACGT | 2260 | 0.0 | 15.309216 | 25 |
| ACCGCTA | 1235 | 0.0 | 15.276255 | 3 |
| ACCGACG | 875 | 0.0 | 15.014623 | 37 |
| GCCCCGT | 3355 | 0.0 | 14.994483 | 1 |
| CGTACGA | 1240 | 0.0 | 14.769112 | 15 |
| CGTCGTG | 1530 | 0.0 | 14.509103 | 13 |
| GGAGGTC | 31285 | 0.0 | 14.396223 | 37 |
| GATCGGA | 1620 | 0.0 | 14.384764 | 2 |
| CGGAGCG | 4735 | 0.0 | 14.185346 | 34 |
| CGATTGA | 3990 | 0.0 | 13.907965 | 4 |