Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868827_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 8065218 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 39910 | 0.4948409330039188 | No Hit |
| CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG | 16175 | 0.20055254551085913 | No Hit |
| GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGC | 13484 | 0.16718704937671863 | No Hit |
| CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCACTCA | 10401 | 0.12896117625090853 | No Hit |
| CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGC | 9326 | 0.11563233628650832 | No Hit |
| GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATA | 9293 | 0.11522317189690348 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGCAAAA | 2000 | 0.0 | 22.02007 | 1 |
| ACACGTC | 625 | 0.0 | 19.535532 | 14 |
| CGGTGGC | 3805 | 0.0 | 18.577208 | 1 |
| GATCGGA | 715 | 0.0 | 17.077995 | 2 |
| CGTCAGA | 775 | 0.0 | 15.99267 | 17 |
| CCGTCAT | 2635 | 0.0 | 15.6601515 | 1 |
| CGACCGT | 1485 | 0.0 | 15.326761 | 1 |
| GACCGTT | 1465 | 0.0 | 15.028247 | 2 |
| ACGTCAG | 850 | 0.0 | 14.799463 | 16 |
| CTATTAG | 2000 | 0.0 | 14.707603 | 11 |
| CGTGTAG | 1030 | 0.0 | 14.547745 | 36 |
| TAACCCC | 2835 | 0.0 | 14.42135 | 9 |
| ACCGTTG | 1515 | 0.0 | 14.409788 | 3 |
| TTAACCC | 2910 | 0.0 | 13.986006 | 8 |
| GTAAGAT | 2140 | 0.0 | 13.918237 | 24 |
| ATCGGAA | 880 | 0.0 | 13.875528 | 3 |
| TAGTAAG | 2110 | 0.0 | 13.8529215 | 22 |
| ACTACCG | 2500 | 0.0 | 13.689672 | 7 |
| TGCAAGC | 2150 | 0.0 | 13.680644 | 37 |
| TTAGCTC | 2240 | 0.0 | 13.461731 | 14 |