Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868834_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 26496377 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG | 200503 | 0.7567185506154295 | No Hit |
| GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGC | 138675 | 0.5233734408292877 | No Hit |
| CTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCC | 39854 | 0.15041301684377453 | No Hit |
| GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGT | 36201 | 0.13662622629501384 | No Hit |
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 30967 | 0.1168725822402059 | No Hit |
| ACTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTC | 26531 | 0.10013067069509164 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGTGGC | 30090 | 0.0 | 26.99112 | 1 |
| CGCAAAA | 4990 | 0.0 | 21.434078 | 1 |
| CGTGTAG | 3875 | 0.0 | 18.570843 | 36 |
| ACACGTC | 1855 | 0.0 | 18.54927 | 14 |
| ACTAAAT | 6975 | 0.0 | 18.146353 | 1 |
| GGTGGCG | 49710 | 0.0 | 16.614347 | 2 |
| GTGGCGC | 50495 | 0.0 | 16.300701 | 3 |
| TGGCGCG | 50775 | 0.0 | 16.188917 | 4 |
| AGCGCAA | 5495 | 0.0 | 16.026205 | 4 |
| ACGTGTA | 4675 | 0.0 | 15.511568 | 35 |
| GATCGGA | 2205 | 0.0 | 15.43875 | 2 |
| GGCGCGT | 54175 | 0.0 | 15.20439 | 5 |
| CGTCAGA | 2350 | 0.0 | 15.035376 | 17 |
| ACGTCAG | 2330 | 0.0 | 14.847023 | 16 |
| CGCAAGT | 6090 | 0.0 | 14.491679 | 6 |
| ACCGTTG | 2810 | 0.0 | 14.418831 | 3 |
| GCGCGTG | 57295 | 0.0 | 14.383054 | 6 |
| GACCGTT | 2870 | 0.0 | 14.375597 | 2 |
| GCGTGCC | 59240 | 0.0 | 13.88156 | 8 |
| CGCGTGC | 59380 | 0.0 | 13.848781 | 7 |