Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868828_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 13784855 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 236388 | 1.7148384948554047 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 170879 | 1.2396140546998864 | No Hit |
| GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 104538 | 0.7583540051745195 | No Hit |
| GCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGGT | 34748 | 0.2520737432493849 | No Hit |
| GGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTTTGGTTC | 33926 | 0.24611067726138577 | No Hit |
| CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTC | 29915 | 0.2170135268016965 | No Hit |
| CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCA | 20979 | 0.15218876078130672 | No Hit |
| CCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGGAGCGGGTC | 19776 | 0.14346179194485542 | No Hit |
| GGGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTTTGGTT | 16187 | 0.11742597219919976 | No Hit |
| GTGGGGGGCATCCATATAGTCACTCCAGGTTTATGGAGGGTTC | 15537 | 0.11271065237900581 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGACG | 1325 | 0.0 | 18.853577 | 37 |
| ACCGCTA | 1565 | 0.0 | 17.96525 | 3 |
| GCGTCAG | 3390 | 0.0 | 17.958584 | 37 |
| ACACCGA | 1365 | 0.0 | 17.894075 | 35 |
| AGCGGGT | 7640 | 0.0 | 17.850485 | 37 |
| TCGAACC | 1355 | 0.0 | 17.613638 | 26 |
| CGTACGA | 1570 | 0.0 | 17.31908 | 15 |
| TATGGCG | 3675 | 0.0 | 17.169418 | 33 |
| GCCCCAG | 8245 | 0.0 | 16.689575 | 1 |
| TCGTACG | 1645 | 0.0 | 16.641962 | 14 |
| CAATCGG | 1270 | 0.0 | 16.605278 | 9 |
| AAACCGC | 1465 | 0.0 | 16.541765 | 18 |
| CAAACCG | 1500 | 0.0 | 16.52535 | 17 |
| CGGAGCG | 8330 | 0.0 | 16.482645 | 34 |
| GGCGTCA | 3810 | 0.0 | 16.02729 | 36 |
| CCCCAGT | 8685 | 0.0 | 15.929347 | 2 |
| AACTCCC | 8655 | 0.0 | 15.858645 | 11 |
| AGTCGTA | 1745 | 0.0 | 15.795476 | 12 |
| TGACGGC | 2080 | 0.0 | 15.746565 | 37 |
| GTCAAAC | 8690 | 0.0 | 15.689079 | 7 |