Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7868831_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 26758619 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 43 |
| %GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 843209 | 3.1511678536175576 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 210098 | 0.7851601011248002 | No Hit |
| CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGG | 186861 | 0.6983207915176789 | No Hit |
| GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGC | 118931 | 0.4444586620856629 | No Hit |
| CTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCC | 42455 | 0.1586591595029624 | No Hit |
| GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGT | 40849 | 0.15265735500027114 | No Hit |
| ACTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTC | 26768 | 0.10003505786303844 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGTGGC | 27980 | 0.0 | 27.414257 | 1 |
| CGTGTAG | 2980 | 0.0 | 18.064577 | 36 |
| GGTGGCG | 46985 | 0.0 | 16.558725 | 2 |
| GTGGCGC | 47650 | 0.0 | 16.357962 | 3 |
| TGGCGCG | 47880 | 0.0 | 16.232954 | 4 |
| AGCGCAA | 6445 | 0.0 | 16.19031 | 4 |
| ACTAAAT | 7025 | 0.0 | 15.937078 | 1 |
| CGCAAAA | 4695 | 0.0 | 15.726677 | 1 |
| GGCGCGT | 49715 | 0.0 | 15.678945 | 5 |
| CGCAAGT | 6580 | 0.0 | 15.662168 | 6 |
| CAGCGCA | 7625 | 0.0 | 15.043625 | 3 |
| TGCAGCG | 7015 | 0.0 | 14.983744 | 1 |
| GCGCGTG | 52155 | 0.0 | 14.945761 | 6 |
| CGCGTGC | 53190 | 0.0 | 14.60126 | 7 |
| GCGCAAG | 7240 | 0.0 | 14.540739 | 5 |
| ACGTGTA | 3730 | 0.0 | 14.53151 | 35 |
| CGTGCCT | 54285 | 0.0 | 14.34441 | 9 |
| GCGTGCC | 54530 | 0.0 | 14.310309 | 8 |
| CCGTCAT | 6690 | 0.0 | 14.024309 | 1 |
| GTAGTCC | 55855 | 0.0 | 13.946817 | 16 |