Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6502997_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 100119347 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 36 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1787889 | 1.7857577516960832 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1409907 | 1.4082263241289419 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 683107 | 0.6822927041264063 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GAGCTGA | 388010 | 0.0 | 142.75603 | 1 |
| AGGTACA | 802740 | 0.0 | 141.66388 | 2 |
| ACGTATC | 275355 | 0.0 | 141.53452 | 1 |
| ACGCTTA | 310620 | 0.0 | 141.31682 | 2 |
| AAGGTAC | 802530 | 0.0 | 141.31386 | 1 |
| AGAGTCA | 129890 | 0.0 | 140.84608 | 1 |
| AGCTGAA | 392715 | 0.0 | 140.59688 | 2 |
| CAGATCT | 333605 | 0.0 | 140.36766 | 1 |
| AACGTGA | 142895 | 0.0 | 140.29248 | 1 |
| AGTCACT | 189150 | 0.0 | 140.23546 | 1 |
| ACGTGAT | 143160 | 0.0 | 140.21532 | 2 |
| GTCACTA | 189610 | 0.0 | 139.81216 | 2 |
| GGTACAT | 421015 | 0.0 | 139.8032 | 3 |
| ACTTCGA | 138295 | 0.0 | 139.67874 | 2 |
| AGATCGC | 253615 | 0.0 | 139.65427 | 1 |
| AGATCTG | 335675 | 0.0 | 139.46019 | 2 |
| GATCGCA | 253815 | 0.0 | 139.39648 | 2 |
| GCTGATC | 216680 | 0.0 | 139.15091 | 2 |
| AACATCG | 234835 | 0.0 | 138.60716 | 2 |
| GAGTCAA | 131940 | 0.0 | 138.1431 | 2 |