Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6502973_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 115615751 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 2131541 | 1.843642394365453 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 457183 | 0.3954331447451308 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 412681 | 0.3569418495581973 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 330854 | 0.2861668908763132 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 227506 | 0.1967776864590016 | No Hit |
| CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT | 184868 | 0.1598986283451984 | No Hit |
| CAACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA | 168842 | 0.1460371952261072 | No Hit |
| CATGTACTCTGCGTTGATACGACTGCTTCCCATGTACTCTGCGTTGATAC | 148534 | 0.12847211449588733 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCAATG | 363640 | 0.0 | 140.00229 | 1 |
| ATGCCTA | 190155 | 0.0 | 139.70752 | 1 |
| CGAACTT | 226570 | 0.0 | 139.68727 | 1 |
| ACAAGCT | 233510 | 0.0 | 138.39684 | 1 |
| AGTCACT | 173155 | 0.0 | 138.23883 | 1 |
| GTGTGAC | 880290 | 0.0 | 138.15968 | 5 |
| ACGCTTA | 270495 | 0.0 | 137.70932 | 2 |
| CAAGCTA | 233970 | 0.0 | 137.68387 | 2 |
| GTGACTG | 591695 | 0.0 | 137.63641 | 7 |
| TGTGACT | 643375 | 0.0 | 137.22147 | 6 |
| CACTGTG | 948915 | 0.0 | 137.03577 | 1 |
| TGACTGG | 601350 | 0.0 | 136.88033 | 8 |
| ACGTATC | 185100 | 0.0 | 136.7693 | 1 |
| CAAGACT | 181935 | 0.0 | 136.71494 | 1 |
| ACTGTGT | 1008400 | 0.0 | 136.45828 | 2 |
| ACTTCGA | 156735 | 0.0 | 136.44572 | 2 |
| GAACTTA | 230595 | 0.0 | 136.4061 | 2 |
| CCGAAGT | 152800 | 0.0 | 136.21053 | 1 |
| TGCCTAA | 194800 | 0.0 | 136.12495 | 2 |
| TGTGTGA | 829335 | 0.0 | 135.78227 | 4 |