Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503036_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 119267270 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 33 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1187643 | 0.9957828329599563 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 522288 | 0.437913939004389 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 247599 | 0.207600123655048 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 241753 | 0.20269852743338554 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGTATC | 343985 | 0.0 | 144.66705 | 1 |
| AGTCACT | 506625 | 0.0 | 144.43225 | 1 |
| AACGTGA | 361430 | 0.0 | 144.08873 | 1 |
| CGAACTT | 230245 | 0.0 | 142.73212 | 1 |
| GAGCTGA | 302600 | 0.0 | 142.69604 | 1 |
| GTCACTA | 511385 | 0.0 | 142.53226 | 2 |
| ATGCCTA | 173225 | 0.0 | 142.51053 | 1 |
| CGCATAC | 249570 | 0.0 | 142.30298 | 1 |
| CCGAAGT | 200825 | 0.0 | 142.13472 | 1 |
| ACGTGAT | 367290 | 0.0 | 141.95189 | 2 |
| AACATCG | 618385 | 0.0 | 141.95049 | 2 |
| AGAGTCA | 157275 | 0.0 | 141.91618 | 1 |
| CAAGACT | 300065 | 0.0 | 141.70244 | 1 |
| ACATCGT | 315635 | 0.0 | 141.08763 | 3 |
| ACGCTTA | 208440 | 0.0 | 140.94487 | 2 |
| ACATCGA | 208725 | 0.0 | 140.30673 | 3 |
| AGTGGTC | 231260 | 0.0 | 140.01294 | 1 |
| AAGACTA | 304080 | 0.0 | 139.77896 | 2 |
| AGCTGAA | 309115 | 0.0 | 139.56772 | 2 |
| AGATCGC | 211860 | 0.0 | 139.42072 | 1 |