Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503022_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 93540884 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 34 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1886511 | 2.016776963536073 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 503102 | 0.5378418275371442 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 182637 | 0.19524831516452207 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 159239 | 0.1702346537584571 | No Hit |
| CTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTT | 151826 | 0.16230977676028804 | No Hit |
| CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT | 134069 | 0.14332663351781025 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 103980 | 0.11115995012405484 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGAACTT | 432990 | 0.0 | 144.67926 | 1 |
| CCGAAGT | 328285 | 0.0 | 143.97646 | 1 |
| ACGTATC | 206680 | 0.0 | 143.67648 | 1 |
| ATGCCTA | 179435 | 0.0 | 143.43752 | 1 |
| CACTTCG | 411435 | 0.0 | 143.09512 | 1 |
| CCGTGAG | 357825 | 0.0 | 143.04793 | 1 |
| CAAGACT | 353535 | 0.0 | 142.71942 | 1 |
| ACTTCGA | 412390 | 0.0 | 142.60506 | 2 |
| GAGCTGA | 243070 | 0.0 | 142.43562 | 1 |
| GAACTTA | 441350 | 0.0 | 141.99646 | 2 |
| ACAAGCT | 143065 | 0.0 | 141.12451 | 1 |
| AGTCACT | 122345 | 0.0 | 141.06865 | 1 |
| AAGACTA | 358400 | 0.0 | 140.97168 | 2 |
| CTCAATG | 179695 | 0.0 | 140.77039 | 1 |
| CGTGAGA | 363230 | 0.0 | 140.68849 | 2 |
| AGACTAT | 181525 | 0.0 | 140.42284 | 3 |
| GTCACTA | 123515 | 0.0 | 140.23843 | 2 |
| AGCTGAA | 247000 | 0.0 | 140.09227 | 2 |
| CGAAGTA | 338955 | 0.0 | 140.0055 | 2 |
| CAAGCTA | 144585 | 0.0 | 139.81613 | 2 |