Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6502991_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 76545831 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1195022 | 1.561184958590364 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 337104 | 0.44039498375816183 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 244586 | 0.3195288323409801 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 166696 | 0.21777280071595276 | No Hit |
| CATGTACTCTGCGTTGATACGACTGCTTCCCATGTACTCTGCGTTGATAC | 105639 | 0.1380075160461711 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG | 98531 | 0.12872157596669112 | Illumina Single End PCR Primer 1 (100% over 22bp) |
| CATGTACTCTGCGTTGATACCACTGCTTCGCATGTACTCTGCGTTGATAC | 77459 | 0.10119297026117595 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCAATG | 160340 | 0.0 | 141.97862 | 1 |
| CATCAAG | 138270 | 0.0 | 141.66833 | 1 |
| CAATGGA | 250755 | 0.0 | 139.80205 | 1 |
| ATCAAGT | 141395 | 0.0 | 139.60316 | 2 |
| ACATTGG | 165630 | 0.0 | 138.0297 | 1 |
| CAAGACT | 111785 | 0.0 | 137.74919 | 1 |
| TCAATGA | 162765 | 0.0 | 137.65764 | 2 |
| AAGACTA | 111140 | 0.0 | 136.4921 | 2 |
| TGCCTAA | 53145 | 0.0 | 136.4837 | 2 |
| CATTGGC | 165720 | 0.0 | 136.47833 | 2 |
| ATGTGAC | 253065 | 0.0 | 136.12007 | 5 |
| ATGCCTA | 55025 | 0.0 | 134.19467 | 1 |
| CGAACTT | 45140 | 0.0 | 133.49557 | 1 |
| AGACTAT | 58255 | 0.0 | 132.43982 | 3 |
| GATGTGA | 380850 | 0.0 | 132.14076 | 4 |
| GCCTAAT | 28880 | 0.0 | 131.81677 | 3 |
| AATGGAA | 265145 | 0.0 | 131.75494 | 2 |
| TCAAGTT | 91615 | 0.0 | 131.0339 | 3 |
| AATCTGA | 94980 | 0.0 | 130.81125 | 2 |
| ATTGGCA | 60130 | 0.0 | 130.74136 | 3 |