Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6502985_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 133104643 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1611184 | 1.2104641608933204 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1377064 | 1.0345724754319803 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 556093 | 0.41778632770909424 | No Hit |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 357147 | 0.26832046722817926 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 152419 | 0.11451065610085442 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 144604 | 0.10863933574428355 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 137646 | 0.10341186971216325 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AACGTGA | 307465 | 0.0 | 140.80923 | 1 |
| GCGAGTA | 399895 | 0.0 | 140.66655 | 1 |
| AACATCG | 538440 | 0.0 | 140.65878 | 2 |
| ACGTGAT | 311240 | 0.0 | 140.18672 | 2 |
| CCGAGAT | 322705 | 0.0 | 140.0533 | 3 |
| CTAACGA | 144315 | 0.0 | 139.9716 | 2 |
| ACGCTTA | 195205 | 0.0 | 139.93181 | 2 |
| ACCTTAC | 451925 | 0.0 | 139.62129 | 2 |
| CGAGTAA | 400275 | 0.0 | 139.41132 | 2 |
| AGTGGTC | 461800 | 0.0 | 139.40273 | 1 |
| ACCGAGA | 590110 | 0.0 | 139.31395 | 2 |
| GATAGAC | 145640 | 0.0 | 139.04288 | 1 |
| GTGGTCA | 463130 | 0.0 | 138.64342 | 2 |
| AACCGAG | 602520 | 0.0 | 138.6024 | 1 |
| ACATCGA | 175405 | 0.0 | 138.48494 | 3 |
| CACCTTA | 455550 | 0.0 | 138.02664 | 1 |
| TACGCAA | 120145 | 0.0 | 137.52618 | 2 |
| ATGCCTA | 136750 | 0.0 | 137.48543 | 1 |
| AGTTAGC | 152805 | 0.0 | 137.39946 | 2 |
| AGAGTCA | 142465 | 0.0 | 137.12175 | 1 |