Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6502983_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 73709117 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1584519 | 2.14969201164084 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 294062 | 0.3989492914424683 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 215221 | 0.29198694647230683 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 180624 | 0.2450497405904347 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 142109 | 0.19279704571688194 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG | 78379 | 0.10633555683484852 | Illumina Single End PCR Primer 1 (100% over 22bp) |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACTTCGA | 287490 | 0.0 | 142.65585 | 2 |
| ATGCCTA | 153390 | 0.0 | 141.29976 | 1 |
| AGTCACT | 172870 | 0.0 | 141.16371 | 1 |
| ACGTGAT | 161080 | 0.0 | 141.05095 | 2 |
| GTCACTA | 172410 | 0.0 | 140.77328 | 2 |
| AACGTGA | 160575 | 0.0 | 140.69774 | 1 |
| CACTTCG | 293825 | 0.0 | 140.55287 | 1 |
| CGTGAGA | 249045 | 0.0 | 140.5105 | 2 |
| AGAGTCA | 136710 | 0.0 | 140.21931 | 1 |
| CAAGCTA | 125035 | 0.0 | 139.51111 | 2 |
| CCGTGAG | 252720 | 0.0 | 139.4898 | 1 |
| CGCATAC | 115320 | 0.0 | 138.79634 | 1 |
| AAGACTA | 151265 | 0.0 | 138.6308 | 2 |
| CAAGACT | 151715 | 0.0 | 138.61258 | 1 |
| TGCCTAA | 154935 | 0.0 | 138.60164 | 2 |
| CTGGCAT | 178510 | 0.0 | 138.58736 | 1 |
| GAGTCAA | 136835 | 0.0 | 138.57268 | 2 |
| CTCAATG | 136335 | 0.0 | 138.40326 | 1 |
| ACTAGTA | 244245 | 0.0 | 137.90695 | 2 |
| CCGAAGT | 106665 | 0.0 | 137.64499 | 1 |