Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503024_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 114920974 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 30 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1237665 | 1.0769705101872875 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 298899 | 0.26009090385885525 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 119555 | 0.10403235879292147 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGAAGT | 489960 | 0.0 | 142.55666 | 1 |
| ATGCCTA | 314725 | 0.0 | 142.35963 | 1 |
| AGTCACT | 426520 | 0.0 | 142.31253 | 1 |
| ACGTATC | 257925 | 0.0 | 142.25066 | 1 |
| GTCACTA | 425635 | 0.0 | 142.16966 | 2 |
| CGAACTT | 319175 | 0.0 | 141.41446 | 1 |
| CGAAGTA | 494540 | 0.0 | 141.4027 | 2 |
| AGTACAA | 539250 | 0.0 | 141.39345 | 1 |
| CTGGCAT | 302550 | 0.0 | 141.35013 | 1 |
| ACTTCGA | 208515 | 0.0 | 140.80173 | 2 |
| TGCCTAA | 318170 | 0.0 | 140.13487 | 2 |
| CAAGACT | 251835 | 0.0 | 139.9752 | 1 |
| GAACTTA | 322265 | 0.0 | 139.94232 | 2 |
| CAAGCTA | 191655 | 0.0 | 139.54297 | 2 |
| ATCGCAT | 160280 | 0.0 | 139.46281 | 3 |
| GATCGCA | 288360 | 0.0 | 139.21443 | 2 |
| AGATCGC | 290910 | 0.0 | 139.20033 | 1 |
| AAGACTA | 254160 | 0.0 | 139.04501 | 2 |
| AGCAGGA | 440565 | 0.0 | 138.92104 | 1 |
| GTACAAG | 544835 | 0.0 | 138.70772 | 2 |