Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503035_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 100656681 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 34 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 3038831 | 3.019005762767004 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 825910 | 0.8205217893087493 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 638221 | 0.634057266402416 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 618932 | 0.614894107227716 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 246992 | 0.24538063201189791 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 112266 | 0.1115335801704012 | Illumina Single End PCR Primer 1 (100% over 21bp) |
| GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC | 107898 | 0.107194076864108 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 165510 | 0.0 | 143.34882 | 1 |
| TATCAGC | 177110 | 0.0 | 142.32455 | 1 |
| ACCTTAC | 774675 | 0.0 | 142.13756 | 2 |
| TGGAACA | 418780 | 0.0 | 141.70618 | 1 |
| ATGAATC | 264585 | 0.0 | 141.67792 | 2 |
| ATCCGTC | 334680 | 0.0 | 141.64288 | 2 |
| CACCTTA | 775125 | 0.0 | 141.27829 | 1 |
| TAGCGAC | 168065 | 0.0 | 141.24606 | 2 |
| GCGAGTA | 186835 | 0.0 | 140.94722 | 1 |
| GGCTAAC | 291565 | 0.0 | 140.64049 | 2 |
| AGGCTAA | 291925 | 0.0 | 140.1825 | 1 |
| CCTAATC | 188915 | 0.0 | 140.13704 | 1 |
| AGCACCT | 162605 | 0.0 | 140.13373 | 1 |
| TTCACGC | 222730 | 0.0 | 140.03734 | 1 |
| TCACGCA | 223090 | 0.0 | 139.90413 | 2 |
| GCTAACT | 146595 | 0.0 | 139.85849 | 3 |
| AGTTAGC | 94540 | 0.0 | 139.43459 | 2 |
| ATCAGCA | 181660 | 0.0 | 138.99065 | 2 |
| CAGATTC | 174095 | 0.0 | 138.97992 | 2 |
| CCTTACG | 159340 | 0.0 | 138.8733 | 3 |