Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503023_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 86895336 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 36 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 4032901 | 4.641101796303544 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 883883 | 1.0171811752934588 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 833044 | 0.9586751583537233 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 507402 | 0.583923169363198 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 479198 | 0.5514657311411972 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 187544 | 0.21582746397344044 | Illumina Single End PCR Primer 1 (100% over 21bp) |
| GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC | 148464 | 0.17085381889771392 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 140214 | 0.1613596384505608 | No Hit |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 138099 | 0.1589256758268361 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 145415 | 0.0 | 143.7256 | 1 |
| TATCAGC | 238440 | 0.0 | 143.67606 | 1 |
| GATAGAC | 171925 | 0.0 | 143.64511 | 1 |
| TTCACGC | 225430 | 0.0 | 141.87982 | 1 |
| ATGAATC | 205170 | 0.0 | 141.70732 | 2 |
| ATCCGTC | 251700 | 0.0 | 141.61024 | 2 |
| TAGCGAC | 147910 | 0.0 | 141.60156 | 2 |
| TGGAACA | 286735 | 0.0 | 141.30643 | 1 |
| TCACGCA | 226430 | 0.0 | 141.05795 | 2 |
| TAAGGTC | 219895 | 0.0 | 140.97478 | 2 |
| ATCAGCA | 243275 | 0.0 | 140.74155 | 2 |
| ATAGACA | 175895 | 0.0 | 140.72969 | 2 |
| CCTAATC | 175510 | 0.0 | 140.34113 | 1 |
| ACCTTAC | 224240 | 0.0 | 139.89958 | 2 |
| GTACGCA | 98625 | 0.0 | 139.6455 | 1 |
| CTAAGGT | 223190 | 0.0 | 139.42805 | 1 |
| AGCACCT | 112155 | 0.0 | 139.38869 | 1 |
| AACTCAC | 178260 | 0.0 | 139.26855 | 1 |
| GGCTAAC | 147315 | 0.0 | 139.18793 | 2 |
| GCTAACT | 75385 | 0.0 | 139.1832 | 3 |