Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6502979_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 103560862 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1917378 | 1.8514504060423906 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 946243 | 0.9137071493282858 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 464010 | 0.4480553667079365 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 289882 | 0.27991462643483983 | No Hit |
| AACACCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 187161 | 0.18072561041448262 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 179868 | 0.17368337470964657 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTT | 138651 | 0.13388359011534684 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGTGAT | 257575 | 0.0 | 141.83531 | 2 |
| AACGTGA | 258390 | 0.0 | 141.37338 | 1 |
| CGCATAC | 287145 | 0.0 | 140.95026 | 1 |
| GTCACTA | 168390 | 0.0 | 140.55444 | 2 |
| AGTCACT | 169385 | 0.0 | 140.35904 | 1 |
| ATGCCTA | 116080 | 0.0 | 140.09183 | 1 |
| AGAGTCA | 177245 | 0.0 | 140.00972 | 1 |
| CGAACTT | 186365 | 0.0 | 139.77951 | 1 |
| CTCAATG | 242500 | 0.0 | 139.54922 | 1 |
| CAAGCTA | 158660 | 0.0 | 139.52068 | 2 |
| AGTGGTC | 300055 | 0.0 | 139.45287 | 1 |
| ACTAGTA | 371900 | 0.0 | 139.42911 | 2 |
| CGACTGG | 408525 | 0.0 | 139.23808 | 1 |
| ACGTATC | 130250 | 0.0 | 139.2338 | 1 |
| GCATACA | 288650 | 0.0 | 139.0874 | 2 |
| AACATCG | 249610 | 0.0 | 139.03322 | 2 |
| GTGGTCA | 300320 | 0.0 | 138.93373 | 2 |
| GAGTCAA | 176980 | 0.0 | 138.71893 | 2 |
| GACTAGT | 374475 | 0.0 | 138.7119 | 1 |
| ACAAGCT | 160805 | 0.0 | 138.39725 | 1 |