Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503025_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 109222668 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 30 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1462299 | 1.3388237320846255 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 494115 | 0.4523923550375093 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 478509 | 0.4381041122342845 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 333170 | 0.3050374121972556 | No Hit |
| GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC | 138246 | 0.12657262684702045 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 115376 | 0.10563374994648547 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 340755 | 0.0 | 143.23022 | 1 |
| TAGCGAC | 343815 | 0.0 | 142.42737 | 2 |
| TATCAGC | 303425 | 0.0 | 142.42546 | 1 |
| ATGAATC | 479290 | 0.0 | 141.98503 | 2 |
| AGTTAGC | 288560 | 0.0 | 141.60461 | 2 |
| GATAGAC | 191935 | 0.0 | 141.35757 | 1 |
| ATCAGCA | 305805 | 0.0 | 140.91585 | 2 |
| TAAGGTC | 352125 | 0.0 | 140.8174 | 2 |
| GGCTAAC | 407150 | 0.0 | 139.97366 | 2 |
| AGCGACT | 168870 | 0.0 | 139.44633 | 3 |
| TCACGCA | 191280 | 0.0 | 138.9306 | 2 |
| ATCCGTC | 171720 | 0.0 | 138.8661 | 2 |
| GACAACT | 199120 | 0.0 | 138.39914 | 3 |
| ATAGACA | 196445 | 0.0 | 138.25572 | 2 |
| GCTAACT | 205970 | 0.0 | 138.05807 | 3 |
| CGGATTG | 276840 | 0.0 | 137.94373 | 1 |
| CCGACAA | 390865 | 0.0 | 137.93263 | 1 |
| TGAATCA | 161025 | 0.0 | 137.91576 | 3 |
| TCAGCAT | 170400 | 0.0 | 137.90714 | 3 |
| GCGAGTA | 180100 | 0.0 | 137.73387 | 1 |