Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503008_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 60612624 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 33 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 2132062 | 3.5175213665060925 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 685636 | 1.131176898066647 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 606649 | 1.000862460598967 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 456613 | 0.7533298673886812 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 215779 | 0.3559967969708752 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATA | 126378 | 0.20850112016269087 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 85851 | 0.14163881108331494 | Illumina Single End PCR Primer 1 (100% over 21bp) |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 77634 | 0.1280822292069058 | No Hit |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 64761 | 0.10684407921359748 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 63756 | 0.1051860087759936 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATAGAC | 141640 | 0.0 | 142.16724 | 1 |
| TGGAACA | 242880 | 0.0 | 141.22633 | 1 |
| TATCAGC | 131025 | 0.0 | 141.09944 | 1 |
| GTGCGAA | 185290 | 0.0 | 140.85999 | 2 |
| ATAGCGA | 68935 | 0.0 | 140.786 | 1 |
| GCCACAT | 193535 | 0.0 | 140.68498 | 1 |
| ATAGACA | 144365 | 0.0 | 140.6061 | 2 |
| ATCAGCA | 131900 | 0.0 | 140.4211 | 2 |
| ATGAATC | 89160 | 0.0 | 140.3897 | 2 |
| GGCTAAC | 91165 | 0.0 | 140.2955 | 2 |
| GGAACAA | 246105 | 0.0 | 139.44057 | 2 |
| TCACGCA | 139405 | 0.0 | 139.39523 | 2 |
| TAGCGAC | 69400 | 0.0 | 139.20393 | 2 |
| ACATCGG | 269065 | 0.0 | 138.81752 | 1 |
| CGAGTAA | 100745 | 0.0 | 138.70447 | 2 |
| TGCGAAT | 91730 | 0.0 | 138.70406 | 3 |
| AGAGATC | 139410 | 0.0 | 138.56384 | 2 |
| GCGAGTA | 100855 | 0.0 | 138.45572 | 1 |
| CATCGGT | 192460 | 0.0 | 137.93936 | 2 |
| CCACATA | 198480 | 0.0 | 137.68808 | 2 |