Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503020_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 84775535 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1278765 | 1.5084127749827825 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 544997 | 0.6428706111969685 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 169953 | 0.2004741108386989 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 134947 | 0.15918153745653152 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CAATGGA | 766330 | 0.0 | 143.04044 | 1 |
| ACGTATC | 109520 | 0.0 | 142.7959 | 1 |
| CAAGACT | 227655 | 0.0 | 142.6301 | 1 |
| CGAACTT | 163255 | 0.0 | 142.45123 | 1 |
| ACAAGCT | 183155 | 0.0 | 142.02417 | 1 |
| AACGTGA | 122655 | 0.0 | 141.57191 | 1 |
| GTCACTA | 175795 | 0.0 | 140.99516 | 2 |
| AAGACTA | 231650 | 0.0 | 140.71938 | 2 |
| CAAGCTA | 186585 | 0.0 | 140.70914 | 2 |
| AGAGTCA | 95395 | 0.0 | 140.65407 | 1 |
| AGTCACT | 173585 | 0.0 | 140.6037 | 1 |
| ACGTGAT | 126890 | 0.0 | 139.97185 | 2 |
| CATCAAG | 88985 | 0.0 | 139.93764 | 1 |
| ACTTCGA | 93755 | 0.0 | 139.85759 | 2 |
| AGACTAT | 120250 | 0.0 | 139.5747 | 3 |
| GAACTTA | 167255 | 0.0 | 139.36157 | 2 |
| AGTACAA | 135095 | 0.0 | 139.22159 | 1 |
| CTCAATG | 165095 | 0.0 | 139.03249 | 1 |
| GAGCTGA | 137475 | 0.0 | 138.51637 | 1 |
| GAGTCAA | 97995 | 0.0 | 138.22168 | 2 |