Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503042_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 96146424 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 2436376 | 2.5340266425301476 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 851446 | 0.8855721976721673 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 608073 | 0.6324447386623552 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGATA | 494939 | 0.5147762957881824 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 419694 | 0.4365154548025624 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 153234 | 0.15937566227112096 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTCCGTTGATA | 149319 | 0.1553037479584264 | No Hit |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 141135 | 0.14679173091242584 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGAT | 123144 | 0.1280796465191467 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATA | 107616 | 0.11192927986588457 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 224795 | 0.0 | 141.41862 | 1 |
| TAGCGAC | 225650 | 0.0 | 140.0268 | 2 |
| GATAGAC | 175535 | 0.0 | 139.61122 | 1 |
| GATGTAC | 265980 | 0.0 | 138.6761 | 2 |
| TAAGGTC | 272985 | 0.0 | 138.34743 | 2 |
| AACAGGC | 547205 | 0.0 | 137.81007 | 2 |
| GAACAGG | 541275 | 0.0 | 137.32 | 1 |
| GGCTAAC | 190545 | 0.0 | 137.20677 | 2 |
| TATCAGC | 149090 | 0.0 | 136.92184 | 1 |
| AGAGATC | 264945 | 0.0 | 136.90411 | 2 |
| TGGAACA | 297250 | 0.0 | 136.20966 | 1 |
| ATAGACA | 181085 | 0.0 | 136.07262 | 2 |
| CTAAGGT | 274465 | 0.0 | 135.8479 | 1 |
| ATCCGTC | 238950 | 0.0 | 135.79614 | 2 |
| ATCAGCA | 148945 | 0.0 | 135.35808 | 2 |
| CTAACGA | 304490 | 0.0 | 135.35526 | 2 |
| ATGAATC | 137940 | 0.0 | 135.1645 | 2 |
| GTGCGAA | 165195 | 0.0 | 134.89365 | 2 |
| GGCTTCA | 334615 | 0.0 | 134.61769 | 2 |
| AGATGTA | 274810 | 0.0 | 134.55652 | 1 |