Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503015_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 93376812 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 5455613 | 5.842577919665966 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 3487108 | 3.734447477174526 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1395387 | 1.49436136243332 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1357655 | 1.4539530435029202 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 328179 | 0.35145663358050816 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 231216 | 0.24761607838999686 | Illumina Single End PCR Primer 1 (100% over 21bp) |
| AGATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 227279 | 0.24339982821431086 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 180538 | 0.1933435037383799 | No Hit |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 169998 | 0.18205590484284256 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATA | 115807 | 0.12402115420260867 | No Hit |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 96975 | 0.10385340634674912 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 96771 | 0.10363493669070646 | Illumina Single End PCR Primer 1 (100% over 21bp) |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCTTAC | 486770 | 0.0 | 141.37332 | 2 |
| GATAGAC | 139605 | 0.0 | 140.74228 | 1 |
| ATGAATC | 161680 | 0.0 | 140.69879 | 2 |
| GATGTAC | 667720 | 0.0 | 140.48933 | 2 |
| AGATGTA | 667120 | 0.0 | 140.4862 | 1 |
| TCACGCA | 177645 | 0.0 | 140.15791 | 2 |
| AGTTAGC | 116275 | 0.0 | 140.1153 | 2 |
| TATCAGC | 119175 | 0.0 | 139.79033 | 1 |
| ATTGGCG | 429555 | 0.0 | 139.71617 | 1 |
| TAAGGTC | 155760 | 0.0 | 139.56024 | 2 |
| ATAGACA | 141925 | 0.0 | 139.13596 | 2 |
| ATCCGTC | 156175 | 0.0 | 138.9819 | 2 |
| TGGAACA | 273585 | 0.0 | 138.69862 | 1 |
| CGGATTG | 188815 | 0.0 | 138.47119 | 1 |
| CACCTTA | 496470 | 0.0 | 138.41348 | 1 |
| TTCACGC | 180330 | 0.0 | 138.40672 | 1 |
| CAGATTC | 138770 | 0.0 | 137.88338 | 2 |
| ATCATTC | 180530 | 0.0 | 137.36366 | 1 |
| ATCAGCA | 121530 | 0.0 | 136.81186 | 2 |
| CTAAGGT | 158735 | 0.0 | 136.78912 | 1 |