Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503001_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 115970619 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 33 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1094365 | 0.9436571171530955 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 589881 | 0.5086469358243229 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 357752 | 0.30848503102324565 | No Hit |
| CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT | 264286 | 0.227890479742977 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 160316 | 0.13823846193319017 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 130540 | 0.1125629932181357 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGAACTT | 297485 | 0.0 | 143.50876 | 1 |
| CTGGCAT | 341990 | 0.0 | 143.18358 | 1 |
| ATGCCTA | 218270 | 0.0 | 142.93723 | 1 |
| AGAGTCA | 230450 | 0.0 | 142.41216 | 1 |
| ACGTATC | 190190 | 0.0 | 141.70934 | 1 |
| GAGCTGA | 361345 | 0.0 | 141.56935 | 1 |
| CAAGACT | 190305 | 0.0 | 140.889 | 1 |
| GAACTTA | 303120 | 0.0 | 140.39897 | 2 |
| AGCTGAA | 366345 | 0.0 | 139.9357 | 2 |
| CTCAATG | 181045 | 0.0 | 139.69308 | 1 |
| CAATGGA | 434140 | 0.0 | 139.50699 | 1 |
| ACTTCGA | 127750 | 0.0 | 139.26381 | 2 |
| AGGTACA | 354590 | 0.0 | 139.21693 | 2 |
| AGCAGAT | 359615 | 0.0 | 139.21501 | 3 |
| GAGTCAA | 232460 | 0.0 | 139.15526 | 2 |
| GATCGCA | 392435 | 0.0 | 139.09703 | 2 |
| GTCACTA | 160530 | 0.0 | 139.00319 | 2 |
| ATCGCAT | 219090 | 0.0 | 138.98477 | 3 |
| TGCCTAA | 223815 | 0.0 | 138.93037 | 2 |
| ACACAGA | 547740 | 0.0 | 138.814 | 1 |