Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503028_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 130035358 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 30 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1250115 | 0.961365446465722 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 399821 | 0.3074709880062006 | No Hit |
| AACCGAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 161947 | 0.12454074221874331 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 131213 | 0.10090563214352821 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AACCGAG | 2048385 | 0.0 | 143.15248 | 1 |
| CCGAAGT | 543030 | 0.0 | 142.63628 | 1 |
| ACCGAGA | 2049070 | 0.0 | 142.30951 | 2 |
| CCGAGAT | 1133155 | 0.0 | 142.19646 | 3 |
| ACGTATC | 202460 | 0.0 | 141.73677 | 1 |
| CGAACTT | 315495 | 0.0 | 141.61168 | 1 |
| ACGCTTA | 422005 | 0.0 | 141.53671 | 2 |
| CGAAGTA | 551925 | 0.0 | 141.24359 | 2 |
| ACAAGCT | 297395 | 0.0 | 141.06367 | 1 |
| CAAGCTA | 297915 | 0.0 | 141.02007 | 2 |
| GAACTTA | 319575 | 0.0 | 140.20294 | 2 |
| CATCAAG | 167210 | 0.0 | 140.1115 | 1 |
| GTCACTA | 261230 | 0.0 | 140.0931 | 2 |
| CGAGATA | 387470 | 0.0 | 139.9869 | 4 |
| GCTCGAT | 158330 | 0.0 | 139.6887 | 3 |
| CGCTCGA | 275405 | 0.0 | 139.67314 | 2 |
| CGAGATT | 595215 | 0.0 | 139.44077 | 4 |
| AACGTGA | 161935 | 0.0 | 139.41808 | 1 |
| ACGTGAT | 162915 | 0.0 | 139.34665 | 2 |
| ACGCTCG | 276740 | 0.0 | 139.3021 | 1 |