Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503004_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 103723069 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 8400292 | 8.098769233293703 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1269814 | 1.224234890311624 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 893610 | 0.8615344769638468 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 809596 | 0.7805361023399723 | No Hit |
| GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC | 704618 | 0.6793262162345003 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 642503 | 0.619440791903294 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 489975 | 0.4723876807000379 | Illumina Single End PCR Primer 1 (100% over 21bp) |
| CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 451002 | 0.4348135900221001 | No Hit |
| CCATGTACTCTGCGTTGATAGCACTGCTTCCCATGTACTCTGCGTTGATA | 414849 | 0.3999582773625798 | No Hit |
| CCATGTACTCTGCGTTGATACCAGTGCTTCCCATGTACTCTGCGTTGATA | 300881 | 0.29008108119130177 | No Hit |
| CCATGTACTCTGCGTTGATAGCAGTGCTTCCCATGTACTCTGCGTTGATA | 264775 | 0.2552710814987551 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGCTA | 205494 | 0.19811793266549027 | No Hit |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 152150 | 0.14668867925610646 | No Hit |
| CCATCCTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 137735 | 0.13279109587472773 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 115033 | 0.1109039687207867 | No Hit |
| GTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACT | 108147 | 0.10426513700631053 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCTTTGATA | 107932 | 0.10405785428504818 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATGAATC | 265455 | 0.0 | 141.4386 | 2 |
| TGGAACA | 320965 | 0.0 | 140.90524 | 1 |
| AGTTAGC | 157030 | 0.0 | 140.26424 | 2 |
| AACTCAC | 229070 | 0.0 | 140.15971 | 1 |
| AGAGATC | 600800 | 0.0 | 139.45941 | 2 |
| CCTAATC | 90375 | 0.0 | 138.46556 | 1 |
| TCACGCA | 224915 | 0.0 | 138.30171 | 2 |
| TACGCAA | 115890 | 0.0 | 137.33557 | 2 |
| GGAACAA | 328475 | 0.0 | 137.11232 | 2 |
| GCCACAT | 177020 | 0.0 | 136.75713 | 1 |
| GAGTTAG | 162050 | 0.0 | 136.5862 | 1 |
| AAGGACA | 166290 | 0.0 | 135.93388 | 1 |
| TTCACGC | 230135 | 0.0 | 135.8071 | 1 |
| ACGTGAC | 249030 | 0.0 | 135.56682 | 5 |
| TACGTGA | 242490 | 0.0 | 135.48958 | 4 |
| GGCTAAC | 58775 | 0.0 | 135.4023 | 2 |
| AGATGTA | 261560 | 0.0 | 135.28973 | 1 |
| TAAGGTC | 76860 | 0.0 | 135.11653 | 2 |
| AGCCATG | 113570 | 0.0 | 134.76233 | 1 |
| CTAATCC | 92465 | 0.0 | 134.49527 | 2 |