Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503010_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 47288673 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 5778035 | 12.218644832769995 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 731660 | 1.5472204094202433 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 446340 | 0.9438623917401954 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 306721 | 0.648614098348668 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 302440 | 0.6395611904778973 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 233820 | 0.4944524453033393 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 148329 | 0.313667080486695 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 130622 | 0.2762225956308818 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCAAAAAAAAAAAAAAAAAA | 115383 | 0.24399711956391754 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 99160 | 0.20969080692960024 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 98490 | 0.2082739771530489 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCTAAACCTAGCCCCAAACCC | 79591 | 0.1683088040977593 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 77397 | 0.1636692152473807 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGAAAAAAAAAAAAAAAAA | 72121 | 0.15251220942486587 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGAAAAAAAAAAAAAAAAAA | 68221 | 0.14426499132255202 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 65880 | 0.13931454578985542 | No Hit |
| NAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 61276 | 0.1295785990865085 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAACAAAAAAAAAAAAAAAAA | 49117 | 0.10386631064906388 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGATAGGTTTGGTCCTAGCCTT | 47735 | 0.10094383490101319 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 5020480 | 0.0 | 76.59832 | 1 |
| AGTGGTA | 5209145 | 0.0 | 74.180275 | 5 |
| GTATCAA | 5225165 | 0.0 | 73.99933 | 9 |
| AGCAGTG | 5211385 | 0.0 | 73.88496 | 2 |
| CAGTGGT | 5269745 | 0.0 | 73.32672 | 4 |
| GGTATCA | 5276640 | 0.0 | 73.25016 | 8 |
| TGGTATC | 5329560 | 0.0 | 72.52431 | 7 |
| GTGGTAT | 5330615 | 0.0 | 72.486946 | 6 |
| GCAGTGG | 5357435 | 0.0 | 72.0963 | 3 |
| ATGGGGG | 270695 | 0.0 | 24.005806 | 25-29 |
| ATGGGGC | 217955 | 0.0 | 23.994434 | 25-29 |
| ATGGGGT | 170435 | 0.0 | 23.640284 | 25-29 |
| CGATAGG | 8995 | 0.0 | 23.258158 | 35-39 |
| CATGGGG | 977810 | 0.0 | 23.239769 | 25-29 |
| AAACCGC | 56520 | 0.0 | 22.725466 | 85-89 |
| GAAACCG | 57460 | 0.0 | 22.654451 | 85-89 |
| ATGGGAT | 264905 | 0.0 | 22.533268 | 25-29 |
| CGACCTA | 11075 | 0.0 | 22.24341 | 45-49 |
| TACGCAC | 11150 | 0.0 | 22.197117 | 50-54 |
| GATAAGT | 60075 | 0.0 | 22.028248 | 95-99 |