Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503019_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 102599402 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 19 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 804389 | 0.784009442862055 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 402726 | 0.39252275563945294 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 221315 | 0.21570788492509926 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 190775 | 0.18594162956232435 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAAGGTC | 1268825 | 0.0 | 143.24007 | 2 |
| GGCTAAC | 478945 | 0.0 | 143.00436 | 2 |
| ATGAATC | 326890 | 0.0 | 142.75008 | 2 |
| CTAAGGT | 1272770 | 0.0 | 142.68199 | 1 |
| AGTTAGC | 330350 | 0.0 | 142.64336 | 2 |
| GCCAAGA | 442290 | 0.0 | 142.51628 | 1 |
| GGATTGC | 720010 | 0.0 | 142.42456 | 2 |
| CGGATTG | 721010 | 0.0 | 141.90349 | 1 |
| AAGGTCA | 401250 | 0.0 | 141.89282 | 3 |
| CCAAGAC | 448460 | 0.0 | 141.68718 | 2 |
| GCTAACT | 238630 | 0.0 | 141.67194 | 3 |
| ACCTTAC | 313875 | 0.0 | 141.5235 | 2 |
| AAGGTCG | 332320 | 0.0 | 141.50966 | 3 |
| ATAGCGA | 93575 | 0.0 | 141.49406 | 1 |
| GAACAGG | 397290 | 0.0 | 141.27303 | 1 |
| AACAGGC | 400695 | 0.0 | 141.19876 | 2 |
| GATAGAC | 81325 | 0.0 | 141.19724 | 1 |
| TGGAACA | 222855 | 0.0 | 141.12665 | 1 |
| CGACACA | 233465 | 0.0 | 141.05147 | 1 |
| AAGGTCT | 557735 | 0.0 | 140.90685 | 3 |