Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6502975_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 108404416 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 2075063 | 1.9141867799924315 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 2065981 | 1.9058088925085857 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 647211 | 0.5970337961139885 | No Hit |
| CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT | 275256 | 0.2539158552360081 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 273814 | 0.25258565112329 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 197544 | 0.18222873872592052 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAG | 140953 | 0.13002514583907726 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTC | 137051 | 0.12642566147858775 | No Hit |
| CAACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTA | 124551 | 0.11489476591064335 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTACCATGTACT | 114446 | 0.10557318993351711 | No Hit |
| ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG | 111566 | 0.1029164715946627 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACAAGCT | 346585 | 0.0 | 142.00835 | 1 |
| ATGCCTA | 153520 | 0.0 | 141.53845 | 1 |
| CAAGCTA | 348740 | 0.0 | 141.06953 | 2 |
| CGAACTT | 116735 | 0.0 | 139.52362 | 1 |
| CTCAATG | 187670 | 0.0 | 139.4739 | 1 |
| CAAGACT | 166990 | 0.0 | 139.25607 | 1 |
| AGTCACT | 116200 | 0.0 | 139.23415 | 1 |
| ACGCTTA | 191490 | 0.0 | 139.15259 | 2 |
| ACTTCGA | 118090 | 0.0 | 139.01144 | 2 |
| ACGTATC | 158130 | 0.0 | 139.00227 | 1 |
| ACGTGAT | 123645 | 0.0 | 138.67944 | 2 |
| CTGGTGA | 505955 | 0.0 | 138.63567 | 4 |
| AACGTGA | 122815 | 0.0 | 138.61058 | 1 |
| TGGTGAC | 490125 | 0.0 | 138.33795 | 5 |
| AAGCTAT | 174215 | 0.0 | 138.27629 | 3 |
| TGCCTAA | 157205 | 0.0 | 138.14978 | 2 |
| AGAGTCA | 89655 | 0.0 | 137.97624 | 1 |
| CATCAAG | 95835 | 0.0 | 137.74615 | 1 |
| AAGACTA | 169860 | 0.0 | 137.34149 | 2 |
| ATCTGGT | 560340 | 0.0 | 137.30374 | 2 |