Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503005_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 72103934 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1169864 | 1.6224690319948423 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 366824 | 0.5087433925588581 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 146200 | 0.2027628617323432 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 131235 | 0.1820080995858007 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGAACTT | 472520 | 0.0 | 144.40974 | 1 |
| CGCATAC | 332635 | 0.0 | 143.41702 | 1 |
| CGACTGG | 505775 | 0.0 | 142.83382 | 1 |
| GAACTTA | 481065 | 0.0 | 142.0038 | 2 |
| ACGTATC | 91835 | 0.0 | 141.67145 | 1 |
| AGAGTCA | 95880 | 0.0 | 141.54369 | 1 |
| CCGTGAG | 173525 | 0.0 | 140.79297 | 1 |
| GCATACA | 338605 | 0.0 | 140.75162 | 2 |
| GAGCTGA | 138970 | 0.0 | 140.67989 | 1 |
| AACGTGA | 87815 | 0.0 | 140.4817 | 1 |
| ACTTCGA | 127930 | 0.0 | 140.47275 | 2 |
| CAATGGA | 339250 | 0.0 | 139.98341 | 1 |
| CGTGAGA | 174465 | 0.0 | 139.70305 | 2 |
| GTCACTA | 106620 | 0.0 | 139.70204 | 2 |
| ACGTGAT | 89880 | 0.0 | 138.93701 | 2 |
| ACTGGAT | 262990 | 0.0 | 138.54793 | 3 |
| GAGTCAA | 97610 | 0.0 | 138.32181 | 2 |
| ACGCTTA | 81485 | 0.0 | 137.79422 | 2 |
| AGCTGAA | 141215 | 0.0 | 137.74721 | 2 |
| CTCAATG | 127970 | 0.0 | 137.54822 | 1 |