Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6502981_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 93550471 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 33 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1857890 | 1.9859761048129836 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 356505 | 0.38108306263898983 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 181839 | 0.19437529074546295 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 142260 | 0.15206764699239195 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 130915 | 0.1399405033460494 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGTGAT | 337730 | 0.0 | 142.2104 | 2 |
| AACGTGA | 339665 | 0.0 | 141.91695 | 1 |
| ACGTATC | 181845 | 0.0 | 141.12689 | 1 |
| GATCGCA | 322250 | 0.0 | 140.26584 | 2 |
| CAAGCTA | 183950 | 0.0 | 140.14534 | 2 |
| ATGCCTA | 125615 | 0.0 | 140.092 | 1 |
| AAGACTA | 245770 | 0.0 | 140.0466 | 2 |
| ACGCTTA | 171015 | 0.0 | 140.04611 | 2 |
| ACTAGTA | 544850 | 0.0 | 139.99876 | 2 |
| AGGTACA | 359105 | 0.0 | 139.95651 | 2 |
| ACTTCGA | 115310 | 0.0 | 139.93721 | 2 |
| CAAGACT | 246205 | 0.0 | 139.9277 | 1 |
| GTCACTA | 141660 | 0.0 | 139.6289 | 2 |
| AGTCACT | 143015 | 0.0 | 139.21124 | 1 |
| CGCATAC | 157840 | 0.0 | 138.94957 | 1 |
| ACAAGCT | 186415 | 0.0 | 138.92493 | 1 |
| AGACTAT | 129300 | 0.0 | 138.9141 | 3 |
| AGATCGC | 327885 | 0.0 | 138.80945 | 1 |
| ATCGCAT | 182505 | 0.0 | 138.79976 | 3 |
| CCGAAGT | 131210 | 0.0 | 138.48161 | 1 |