Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503013_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 82837614 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 30 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 2798787 | 3.378642702094244 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 620029 | 0.7484872753577861 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 444069 | 0.5360716932286341 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 297321 | 0.35892028469096177 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 143515 | 0.17324859211903423 | Illumina Single End PCR Primer 1 (100% over 21bp) |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 130320 | 0.15731983782149978 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 174365 | 0.0 | 142.945 | 1 |
| TAGCGAC | 175685 | 0.0 | 142.28787 | 2 |
| GATAGAC | 116060 | 0.0 | 141.45189 | 1 |
| ATCCGTC | 196895 | 0.0 | 140.71951 | 2 |
| GAACAGG | 780310 | 0.0 | 140.39201 | 1 |
| GATGTAC | 212035 | 0.0 | 140.05219 | 2 |
| AACAGGC | 783260 | 0.0 | 139.99152 | 2 |
| ATGAATC | 155845 | 0.0 | 139.89021 | 2 |
| TAAGGTC | 241510 | 0.0 | 139.84538 | 2 |
| TATCAGC | 112050 | 0.0 | 139.79715 | 1 |
| AGTTAGC | 103865 | 0.0 | 139.50531 | 2 |
| ACAGGCT | 314505 | 0.0 | 139.35663 | 3 |
| CAGATTC | 190155 | 0.0 | 139.1481 | 2 |
| GTACGCA | 91775 | 0.0 | 139.0368 | 1 |
| AGCGACT | 86165 | 0.0 | 138.8581 | 3 |
| AGAGATC | 215015 | 0.0 | 138.7274 | 2 |
| GGCTAAC | 161855 | 0.0 | 138.46431 | 2 |
| CGGATTG | 196035 | 0.0 | 138.06352 | 1 |
| ATCAGCA | 113180 | 0.0 | 137.96855 | 2 |
| GCGAGTA | 132520 | 0.0 | 137.92815 | 1 |