Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6503029_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 92048994 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 32 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 3793904 | 4.121613757125906 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 824867 | 0.8961173437702099 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 721018 | 0.7832980771088058 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 555092 | 0.6030397246927001 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 391463 | 0.425276782492593 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 197320 | 0.21436410266471786 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 177350 | 0.1926691344394269 | Illumina Single End PCR Primer 1 (100% over 21bp) |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 132999 | 0.14448718472686403 | No Hit |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 109816 | 0.11930168405751397 | No Hit |
| CCATGTACTCTGCGTTGATAGCACTGCTTCCCATGTACTCTGCGTTGATA | 100251 | 0.1089104786957259 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATA | 99204 | 0.1077730409525171 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 152120 | 0.0 | 142.24445 | 1 |
| ATGAATC | 313885 | 0.0 | 141.61461 | 2 |
| TATCAGC | 186135 | 0.0 | 141.25526 | 1 |
| GATAGAC | 141720 | 0.0 | 141.19829 | 1 |
| TAGCGAC | 153335 | 0.0 | 141.1618 | 2 |
| ATCCGTC | 225550 | 0.0 | 140.3404 | 2 |
| ATCAGCA | 187630 | 0.0 | 139.45468 | 2 |
| TAGGATG | 309515 | 0.0 | 139.40437 | 1 |
| AATCCGT | 227310 | 0.0 | 139.28348 | 1 |
| GGCTAAC | 168680 | 0.0 | 138.82654 | 2 |
| AGGATGA | 309600 | 0.0 | 138.81256 | 2 |
| ATAGACA | 144810 | 0.0 | 138.67479 | 2 |
| GTCGTAG | 157225 | 0.0 | 138.46284 | 1 |
| TCTTCAC | 599855 | 0.0 | 138.40018 | 1 |
| CTTCACA | 598740 | 0.0 | 138.37291 | 2 |
| TGAATCA | 105675 | 0.0 | 137.28726 | 3 |
| AGCGACT | 75440 | 0.0 | 137.2604 | 3 |
| GTGCGAA | 132240 | 0.0 | 137.08379 | 2 |
| TAAGGTC | 114525 | 0.0 | 136.73203 | 2 |
| TCACGCA | 93810 | 0.0 | 136.651 | 2 |