Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403979_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 105251574 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 1963041 | 1.8650941980212097 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 377542 | 0.358704374340283 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 174627 | 0.16591390832786976 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 171099 | 0.16256193945375108 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCACGCCTGTAATCCCAGCAC | 132622 | 0.12600476644653313 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAGTTGAGTGCTGAAAAA | 122754 | 0.11662913468638483 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCATGCCTGTAATCCCAGCAC | 116223 | 0.11042400183012939 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCTTTGGGAGGCCGAGGCGGG | 115725 | 0.10995084976116368 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 7293185 | 0.0 | 126.157234 | 1 |
| AGCAGTG | 7413550 | 0.0 | 124.06081 | 2 |
| AGTGGTA | 7427665 | 0.0 | 123.85706 | 5 |
| TGGTATC | 7452730 | 0.0 | 123.421455 | 7 |
| CAGTGGT | 7455240 | 0.0 | 123.38011 | 4 |
| GGTATCA | 7478045 | 0.0 | 123.335945 | 8 |
| GTGGTAT | 7465120 | 0.0 | 123.228485 | 6 |
| GTATCAA | 7493720 | 0.0 | 123.13153 | 9 |
| GCAGTGG | 7614400 | 0.0 | 120.74342 | 3 |
| CGGTATC | 11985 | 0.0 | 52.444504 | 7 |
| AGCGGTA | 12080 | 0.0 | 52.21087 | 5 |
| GCGGTAT | 12555 | 0.0 | 50.1782 | 6 |
| AACCGAG | 26880 | 0.0 | 43.88672 | 1 |
| ACCGAGA | 30640 | 0.0 | 37.630764 | 2 |
| ACGCTTA | 12810 | 0.0 | 33.303078 | 2 |
| AGGGGTA | 36950 | 0.0 | 32.77444 | 5 |
| AACATCG | 30310 | 0.0 | 28.316374 | 2 |
| CAGCGGT | 22900 | 0.0 | 27.856207 | 4 |
| CATGGGG | 2439235 | 0.0 | 26.747957 | 25-29 |
| ATGGGGT | 769895 | 0.0 | 26.278652 | 25-29 |