Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403977_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 99069859 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 28 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 270162 | 0.2726984803723199 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 147795 | 0.14918260860752816 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 118379 | 0.11949042947562892 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 520325 | 0.0 | 143.5491 | 1 |
| TAGCGAC | 520135 | 0.0 | 143.2248 | 2 |
| GATAGAC | 284915 | 0.0 | 142.47214 | 1 |
| AGCGACT | 256020 | 0.0 | 141.94493 | 3 |
| TATCAGC | 210060 | 0.0 | 140.49449 | 1 |
| AACAGGC | 832765 | 0.0 | 139.87816 | 2 |
| ACCTTAC | 604735 | 0.0 | 139.86694 | 2 |
| TAGGATG | 526275 | 0.0 | 139.85078 | 1 |
| GAACAGG | 832150 | 0.0 | 139.54219 | 1 |
| GTGCGAA | 148895 | 0.0 | 139.09 | 2 |
| ATCAGCA | 211975 | 0.0 | 138.89268 | 2 |
| ATAGACA | 293400 | 0.0 | 138.86328 | 2 |
| AGGATGA | 529000 | 0.0 | 138.83244 | 2 |
| AGTTAGC | 178885 | 0.0 | 138.8011 | 2 |
| GCCACAT | 258245 | 0.0 | 138.75696 | 1 |
| GCGAGTA | 173295 | 0.0 | 138.7209 | 1 |
| ACAGGCT | 349730 | 0.0 | 138.35426 | 3 |
| CACCTTA | 611650 | 0.0 | 138.3428 | 1 |
| GCGACTT | 138210 | 0.0 | 138.26347 | 4 |
| TCACGCA | 196920 | 0.0 | 138.2446 | 2 |