Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211770_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 29376496 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 2367909 | 8.060556303243246 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 364274 | 1.240018550885034 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 135575 | 0.46150841135035303 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 78526 | 0.2673089397728034 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAGTTGAGTGCTGAAAAA | 71955 | 0.24494071723189856 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 44340 | 0.15093699398321705 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 42427 | 0.14442498519905164 | No Hit |
| AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA | 36120 | 0.1229554402948534 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 31804 | 0.10826342256748389 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 2150120 | 0.0 | 60.441288 | 1 |
| AGCAGTG | 2185145 | 0.0 | 59.152824 | 2 |
| CAGTGGT | 2182200 | 0.0 | 59.015972 | 4 |
| GGTATCA | 2180735 | 0.0 | 59.009983 | 8 |
| AGTGGTA | 2181935 | 0.0 | 58.99523 | 5 |
| GTGGTAT | 2181465 | 0.0 | 58.959328 | 6 |
| GTATCAA | 2201640 | 0.0 | 58.782925 | 9 |
| TGGTATC | 2184220 | 0.0 | 58.73991 | 7 |
| GCAGTGG | 2213680 | 0.0 | 58.200554 | 3 |
| CATGCGA | 7105 | 0.0 | 23.36783 | 145 |
| ATGGGGT | 61620 | 0.0 | 22.174164 | 25-29 |
| CGTGGGA | 9800 | 0.0 | 22.046371 | 145 |
| GGTATAA | 19100 | 0.0 | 21.484262 | 8 |
| TGGACGG | 15580 | 0.0 | 21.275091 | 70-74 |
| ATGGGGC | 39005 | 0.0 | 20.316536 | 25-29 |
| GGACGGG | 15635 | 0.0 | 20.217209 | 70-74 |
| GCAGTTG | 25220 | 0.0 | 20.038454 | 3 |
| CATGGGG | 296965 | 0.0 | 19.914755 | 25-29 |
| TTAGGGC | 16840 | 0.0 | 19.709126 | 45-49 |
| TGGTATA | 21370 | 0.0 | 19.33783 | 7 |