Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211792_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 75812351 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1699078 | 2.241162525087766 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 393878 | 0.5195433129359093 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 159216 | 0.21001327343086879 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 122618 | 0.1617388174652439 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATAC | 93980 | 0.12396396993413382 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 87415 | 0.11530443106823056 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG | 78235 | 0.10319558616510915 | Illumina Single End PCR Primer 1 (100% over 22bp) |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGAAGT | 293855 | 0.0 | 141.00282 | 1 |
| AGAGTCA | 220295 | 0.0 | 140.78735 | 1 |
| CGAAGTA | 294700 | 0.0 | 140.61768 | 2 |
| GAGTCAA | 219075 | 0.0 | 140.52017 | 2 |
| ACTTCGA | 204335 | 0.0 | 140.39925 | 2 |
| ATGCCTA | 156395 | 0.0 | 139.9529 | 1 |
| CAATGGA | 379215 | 0.0 | 139.4507 | 1 |
| AGCTGAA | 179770 | 0.0 | 139.18172 | 2 |
| ACGTGAT | 128550 | 0.0 | 139.05264 | 2 |
| GAGCTGA | 179820 | 0.0 | 138.74792 | 1 |
| AGCAGGA | 257155 | 0.0 | 138.72827 | 1 |
| AACGTGA | 128595 | 0.0 | 138.56378 | 1 |
| AGTCAAT | 126835 | 0.0 | 138.39531 | 3 |
| TGCCTAA | 158215 | 0.0 | 138.18796 | 2 |
| CTCAATG | 214555 | 0.0 | 138.17912 | 1 |
| AGTCACT | 156235 | 0.0 | 138.0448 | 1 |
| GCAGGAA | 258165 | 0.0 | 137.84312 | 2 |
| GTCACTA | 156555 | 0.0 | 137.59279 | 2 |
| AACATCG | 144050 | 0.0 | 137.13622 | 2 |
| ACGTATC | 99640 | 0.0 | 136.8764 | 1 |