Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211742_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 115877554 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 538216 | 0.46446959002948923 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 498725 | 0.43038965078603575 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 346304 | 0.29885339139968387 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 320364 | 0.276467692785438 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC | 219714 | 0.18960876581844316 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 218803 | 0.18882259112925354 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT | 184973 | 0.1596279811014996 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 183533 | 0.15838529004504187 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGATAGGTTTGGTCCTAGCCTT | 178928 | 0.154411267604078 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGTTCGTTTGTTCAACGAT | 154643 | 0.13345380072485824 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 151578 | 0.13080876733038393 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACTCTTCTGGTCCCCACAG | 144323 | 0.1245478481535777 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 136531 | 0.11782350877030075 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAATCTTAGTTCAACTTTAA | 121002 | 0.10442229389826437 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 120872 | 0.10431010651122305 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 5646595 | 0.0 | 137.53247 | 1 |
| AGTGGTA | 5704225 | 0.0 | 135.85178 | 5 |
| TGGTATC | 5689290 | 0.0 | 135.74792 | 7 |
| GTGGTAT | 5707245 | 0.0 | 135.73259 | 6 |
| AGCAGTG | 5718670 | 0.0 | 135.47491 | 2 |
| CAGTGGT | 5718980 | 0.0 | 135.45963 | 4 |
| GGTATCA | 5703715 | 0.0 | 135.45761 | 8 |
| GTATCAA | 5738595 | 0.0 | 134.99911 | 9 |
| GCAGTGG | 5990870 | 0.0 | 129.26471 | 3 |
| CGAGTAA | 13685 | 0.0 | 61.67535 | 2 |
| TGGTATA | 59905 | 0.0 | 47.147217 | 7 |
| GGTATAA | 61610 | 0.0 | 45.912575 | 8 |
| GTTGTAT | 55930 | 0.0 | 37.986145 | 6 |
| TTGTATC | 59115 | 0.0 | 35.92735 | 7 |
| CAGTTGT | 70835 | 0.0 | 30.216755 | 4 |
| TGTATCA | 70780 | 0.0 | 30.026632 | 8 |
| GTATAAA | 98030 | 0.0 | 28.965347 | 9 |
| GCAGTTG | 74160 | 0.0 | 28.783009 | 3 |
| CAACGCA | 5702590 | 0.0 | 27.602165 | 10-14 |
| ATCAACG | 5705055 | 0.0 | 27.511478 | 10-14 |