Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211794_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 107237829 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 2303051 | 2.1476106160261783 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1477869 | 1.3781228264141752 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 199579 | 0.18610876577891186 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 129693 | 0.12093959865599292 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATAC | 125350 | 0.11688972181635644 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 120532 | 0.11239690426780274 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGTGAC | 441355 | 0.0 | 140.79652 | 5 |
| ATGCCTA | 243485 | 0.0 | 140.52632 | 1 |
| CAATGGA | 673210 | 0.0 | 140.05734 | 1 |
| TGCCTAA | 246510 | 0.0 | 139.46672 | 2 |
| ACGTGAT | 192340 | 0.0 | 139.21573 | 2 |
| ATCGTGA | 437540 | 0.0 | 138.99304 | 4 |
| GATCGTG | 430570 | 0.0 | 138.94972 | 3 |
| AGAGTCA | 149475 | 0.0 | 138.89308 | 1 |
| GAGTCAA | 149880 | 0.0 | 138.74916 | 2 |
| AGTCACT | 187490 | 0.0 | 138.74269 | 1 |
| CCGTGAG | 244760 | 0.0 | 138.33519 | 1 |
| GTCACTA | 189595 | 0.0 | 138.03758 | 2 |
| AGCTGAA | 201705 | 0.0 | 137.81728 | 2 |
| CTCAATG | 263005 | 0.0 | 137.72919 | 1 |
| CGTGACT | 198655 | 0.0 | 137.51648 | 6 |
| AAGGTAC | 196310 | 0.0 | 137.44228 | 1 |
| GAGCTGA | 201400 | 0.0 | 137.40433 | 1 |
| CAAGCTA | 123445 | 0.0 | 137.33316 | 2 |
| ACGCTTA | 166070 | 0.0 | 137.18 | 2 |
| CGTGAGA | 246725 | 0.0 | 136.97852 | 2 |