Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211757_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 50931689 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 335823 | 0.6593596375725925 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 217536 | 0.4271132653778672 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 83424 | 0.16379586390704615 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAATCTTAGTTCAACTTTAA | 76894 | 0.15097476936215487 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTGCCCCTCATTTACATAAAT | 72872 | 0.14307791756130453 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 69755 | 0.1369579555863541 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 66490 | 0.13054740831390846 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT | 60175 | 0.11814844781605417 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGACAAACCTACCGAGCC | 59130 | 0.11609668000603711 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT | 54119 | 0.10625801158881654 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 2759430 | 0.0 | 142.28647 | 1 |
| AGCAGTG | 2816500 | 0.0 | 139.27583 | 2 |
| AGTGGTA | 2822460 | 0.0 | 138.94035 | 5 |
| TGGTATC | 2813445 | 0.0 | 138.92381 | 7 |
| GTGGTAT | 2824205 | 0.0 | 138.83835 | 6 |
| CAGTGGT | 2828210 | 0.0 | 138.65582 | 4 |
| GGTATCA | 2823880 | 0.0 | 138.41687 | 8 |
| GTATCAA | 2838910 | 0.0 | 137.85284 | 9 |
| GCAGTGG | 2890115 | 0.0 | 135.69199 | 3 |
| CGCTGTT | 21690 | 0.0 | 50.04354 | 145 |
| TGGTATA | 23330 | 0.0 | 41.452564 | 7 |
| GGTATAA | 24530 | 0.0 | 39.395164 | 8 |
| TGCGGCT | 22125 | 0.0 | 36.049164 | 145 |
| CACGCAG | 17230 | 0.0 | 35.854206 | 145 |
| AGAGAGT | 134585 | 0.0 | 31.942623 | 145 |
| GTTGTAT | 23320 | 0.0 | 30.185682 | 6 |
| TTGTATC | 23590 | 0.0 | 29.532879 | 7 |
| CAACGCA | 2820960 | 0.0 | 28.459812 | 10-14 |
| GCAGTTG | 24680 | 0.0 | 28.432835 | 3 |
| AACGCAG | 2833935 | 0.0 | 28.368599 | 10-14 |