Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211772_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 36223034 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 1245528 | 3.4384971728210285 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 303376 | 0.8375223345454718 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 271895 | 0.7506135460657437 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 41142 | 0.11357966315024853 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTCAAGCGACTAAGTGCATGT | 38337 | 0.10583597166377616 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 1418370 | 0.0 | 75.74586 | 1 |
| GGTATCA | 1436615 | 0.0 | 74.127266 | 8 |
| CAGTGGT | 1438640 | 0.0 | 74.10583 | 4 |
| TGGTATC | 1438530 | 0.0 | 73.88698 | 7 |
| GTGGTAT | 1445270 | 0.0 | 73.76863 | 6 |
| AGCAGTG | 1454980 | 0.0 | 73.33732 | 2 |
| GTATCAA | 1463290 | 0.0 | 73.266304 | 9 |
| AGTGGTA | 1460535 | 0.0 | 73.053314 | 5 |
| GCAGTGG | 1493025 | 0.0 | 71.315285 | 3 |
| TCCGAAT | 20710 | 0.0 | 44.10636 | 145 |
| TGCGGTT | 16230 | 0.0 | 23.718477 | 145 |
| GCAGTTG | 27515 | 0.0 | 22.806362 | 3 |
| CATGGGG | 237650 | 0.0 | 22.310057 | 25-29 |
| ATGGGGT | 59380 | 0.0 | 21.986511 | 25-29 |
| GAATGGG | 28125 | 0.0 | 21.265333 | 145 |
| CGATTAC | 10465 | 0.0 | 20.938164 | 65-69 |
| TTTCGGG | 9715 | 0.0 | 20.67029 | 105-109 |
| CATGGGT | 103255 | 0.0 | 20.648354 | 25-29 |
| CACGGGA | 9635 | 0.0 | 20.164797 | 145 |
| GCGACTA | 8075 | 0.0 | 20.128977 | 35-39 |