Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211753_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 49278170 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 288873 | 0.5862088628697049 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 228171 | 0.46302652878546424 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 2523040 | 0.0 | 137.7405 | 1 |
| GTGGTAT | 2560365 | 0.0 | 135.31798 | 6 |
| TGGTATC | 2553690 | 0.0 | 135.30348 | 7 |
| AGTGGTA | 2562290 | 0.0 | 135.24518 | 5 |
| GGTATCA | 2555760 | 0.0 | 135.24495 | 8 |
| AGCAGTG | 2564000 | 0.0 | 135.17413 | 2 |
| CAGTGGT | 2569495 | 0.0 | 134.83337 | 4 |
| GTATCAA | 2571465 | 0.0 | 134.7646 | 9 |
| GCAGTGG | 2671090 | 0.0 | 129.69171 | 3 |
| TGGTATA | 29350 | 0.0 | 37.619347 | 7 |
| GGTATAA | 29970 | 0.0 | 36.88948 | 8 |
| CGGTCTG | 7735 | 0.0 | 31.029755 | 145 |
| GTTGTAT | 31450 | 0.0 | 30.036077 | 6 |
| GCAGTTG | 31875 | 0.0 | 29.597649 | 3 |
| CAACGCA | 2551385 | 0.0 | 27.811878 | 10-14 |
| AACGCAG | 2563695 | 0.0 | 27.678448 | 10-14 |
| TCAACGC | 2565105 | 0.0 | 27.66295 | 10-14 |
| ATCAACG | 2556550 | 0.0 | 27.66262 | 10-14 |
| CGCAGAG | 2551125 | 0.0 | 27.65624 | 15-19 |
| AGAGTAC | 2559960 | 0.0 | 27.656176 | 15-19 |