Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211791_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 97797081 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 913908 | 0.9344941491658632 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 398605 | 0.40758373964147254 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 390671 | 0.3994710230666292 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 377643 | 0.38614956207128515 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 118102 | 0.1207622955535861 | No Hit |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 114246 | 0.11681943758628133 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATTGGCT | 1008735 | 0.0 | 140.46927 | 1 |
| GGCTAAC | 327185 | 0.0 | 138.99957 | 2 |
| AGGCTAA | 326345 | 0.0 | 138.90189 | 1 |
| ATAGCGA | 164075 | 0.0 | 138.82219 | 1 |
| GATAGAC | 150225 | 0.0 | 137.80518 | 1 |
| TAGCGAC | 166490 | 0.0 | 136.94746 | 2 |
| GCGAGTA | 179660 | 0.0 | 136.81927 | 1 |
| TAAGGTC | 235565 | 0.0 | 136.5067 | 2 |
| TCGTAGA | 247785 | 0.0 | 136.44775 | 2 |
| CGAGTAA | 183645 | 0.0 | 136.1857 | 2 |
| GTCGTAG | 244535 | 0.0 | 136.07652 | 1 |
| AAGGAGC | 344050 | 0.0 | 135.94519 | 2 |
| GCTAACT | 167380 | 0.0 | 135.04248 | 3 |
| AGAGATC | 194895 | 0.0 | 134.76648 | 2 |
| CAAGGAG | 347325 | 0.0 | 134.74721 | 1 |
| ATGAATC | 156080 | 0.0 | 134.62672 | 2 |
| TGGAACA | 285545 | 0.0 | 134.51398 | 1 |
| GGCTTCA | 324935 | 0.0 | 133.72322 | 2 |
| CTAAGGT | 241670 | 0.0 | 133.4312 | 1 |
| TTGGCTC | 1065175 | 0.0 | 133.29672 | 2 |