Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403969_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 78231292 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 14762531 | 18.870365837751983 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1553603 | 1.9859099348634046 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 367851 | 0.47020954223790656 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 176005 | 0.22498030583465245 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 161823 | 0.20685201006267417 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 148179 | 0.18941141864306676 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC | 141355 | 0.18068856641150705 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 138319 | 0.17680776638586004 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 137578 | 0.1758605750752525 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 131361 | 0.16791362719664657 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 115191 | 0.14724414879917874 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 115119 | 0.1471521140159618 | No Hit |
| AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA | 108737 | 0.13899425309248375 | No Hit |
| CAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGT | 94652 | 0.12098994862567271 | No Hit |
| CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT | 93773 | 0.11986635731389941 | No Hit |
| AGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTG | 80091 | 0.10237719198092754 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCCG | 79615 | 0.1017687398029934 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAATCTTAGTTCAACTTTAA | 79327 | 0.10140060067012571 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGTAAGCAGTGGTATCAACGCAG | 78421 | 0.10024249631464606 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 10779170 | 0.0 | 66.99071 | 1 |
| GTATCAA | 11087550 | 0.0 | 65.12959 | 9 |
| AGTGGTA | 11107825 | 0.0 | 64.99217 | 5 |
| AGCAGTG | 11120070 | 0.0 | 64.90999 | 2 |
| GGTATCA | 11311330 | 0.0 | 63.807987 | 8 |
| CAGTGGT | 11329630 | 0.0 | 63.717182 | 4 |
| GCAGTGG | 11496575 | 0.0 | 62.785812 | 3 |
| TGGTATC | 11551765 | 0.0 | 62.471558 | 7 |
| GTGGTAT | 11563530 | 0.0 | 62.437325 | 6 |
| CATGGGG | 1401600 | 0.0 | 22.406 | 25-29 |
| ATGGGGG | 491415 | 0.0 | 22.377712 | 25-29 |
| ATGGGGC | 298630 | 0.0 | 22.179348 | 25-29 |
| ACACTCG | 38455 | 0.0 | 22.01423 | 30-34 |
| ATGGGGT | 272775 | 0.0 | 21.584599 | 25-29 |
| ATGGGAT | 544495 | 0.0 | 20.63364 | 25-29 |
| CGATAGG | 11205 | 0.0 | 20.35621 | 35-39 |
| TTAGGGC | 47445 | 0.0 | 19.375723 | 45-49 |
| TACGCAC | 17810 | 0.0 | 19.113478 | 50-54 |
| CACTCGC | 43290 | 0.0 | 19.086477 | 30-34 |
| ACGTCAA | 35530 | 0.0 | 19.0126 | 95-99 |