Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211760_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 83500752 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 950307 | 1.138081966016306 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 266889 | 0.3196246663742621 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 233333 | 0.27943820194577407 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 110737 | 0.13261796732082126 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 109079 | 0.13063235646069393 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGTTCGTTTGTTCAACGAT | 103387 | 0.12381565138479232 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 98526 | 0.11799414692696421 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT | 88966 | 0.10654514824010208 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 2979500 | 0.0 | 135.71883 | 1 |
| GTGGTAT | 2978280 | 0.0 | 135.50487 | 6 |
| TGGTATC | 2967750 | 0.0 | 135.28575 | 7 |
| AGTGGTA | 2988780 | 0.0 | 135.06255 | 5 |
| GGTATCA | 2977595 | 0.0 | 134.92453 | 8 |
| CAGTGGT | 2990930 | 0.0 | 134.89395 | 4 |
| AGCAGTG | 2995345 | 0.0 | 134.62401 | 2 |
| GTATCAA | 3004550 | 0.0 | 134.19524 | 9 |
| GCAGTGG | 3050690 | 0.0 | 132.12045 | 3 |
| GGTATAA | 45635 | 0.0 | 51.16415 | 8 |
| TGGTATA | 47815 | 0.0 | 48.87663 | 7 |
| GTATAAA | 77885 | 0.0 | 30.135654 | 9 |
| GTTGTAT | 49475 | 0.0 | 29.52658 | 6 |
| CAACGCA | 2975340 | 0.0 | 27.396204 | 10-14 |
| ATCAACG | 2978125 | 0.0 | 27.330017 | 10-14 |
| CGCAGAG | 2984605 | 0.0 | 27.271936 | 15-19 |
| TCAACGC | 2992650 | 0.0 | 27.211855 | 10-14 |
| TTGTATC | 53940 | 0.0 | 27.175888 | 7 |
| AACGCAG | 3009875 | 0.0 | 27.089184 | 10-14 |
| AGAGTAC | 3007290 | 0.0 | 27.043613 | 15-19 |