Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211804_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 172745647 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 976629 | 0.5653566483212165 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 952997 | 0.5516764193774446 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 891860 | 0.516285078951946 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 590537 | 0.34185347663203347 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 375212 | 0.21720489431493462 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTCTTGCTTCAAC | 352842 | 0.2042552192357125 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 341616 | 0.1977566473787904 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 255366 | 0.14782774815738192 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC | 234267 | 0.13561383691480225 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 179335 | 0.10381448280430475 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTCTTGCTTCAACA | 178866 | 0.1035429853696979 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 9022755 | 0.0 | 137.22916 | 1 |
| AGCAGTG | 9288545 | 0.0 | 133.29886 | 2 |
| GTGGTAT | 9322605 | 0.0 | 132.76886 | 6 |
| CAGTGGT | 9334535 | 0.0 | 132.63774 | 4 |
| AGTGGTA | 9338730 | 0.0 | 132.56244 | 5 |
| GGTATCA | 9363290 | 0.0 | 132.29807 | 8 |
| TGGTATC | 9382955 | 0.0 | 131.98297 | 7 |
| GTATCAA | 9412275 | 0.0 | 131.73926 | 9 |
| GCAGTGG | 9495910 | 0.0 | 130.32492 | 3 |
| CAACGCA | 9344455 | 0.0 | 27.255276 | 10-14 |
| ATCAACG | 9357780 | 0.0 | 27.094238 | 10-14 |
| CGCAGAG | 9342645 | 0.0 | 27.084232 | 15-19 |
| AGAGTAC | 9410400 | 0.0 | 27.010525 | 15-19 |
| AACGCAG | 9429475 | 0.0 | 27.002645 | 10-14 |
| GCAGAGT | 9407040 | 0.0 | 26.932932 | 15-19 |
| CAGAGTA | 9439730 | 0.0 | 26.929272 | 15-19 |
| TCAACGC | 9447495 | 0.0 | 26.89832 | 10-14 |
| ACATGGG | 9253150 | 0.0 | 26.853983 | 20-24 |
| TACATGG | 9453520 | 0.0 | 26.814774 | 20-24 |
| GTACATG | 9458510 | 0.0 | 26.761412 | 20-24 |