Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211749_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 96010485 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1990670 | 2.0733881304734583 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 846005 | 0.8811589692521602 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 172742 | 0.1799199327031834 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 106206 | 0.11061916831271086 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGAAGTA | 523265 | 0.0 | 140.91489 | 2 |
| CTGGCAT | 444575 | 0.0 | 140.45549 | 1 |
| GTCACTA | 367235 | 0.0 | 140.3637 | 2 |
| TGGCATA | 443495 | 0.0 | 140.28717 | 2 |
| AGCTGAA | 342085 | 0.0 | 140.11617 | 2 |
| AAGACTA | 298610 | 0.0 | 139.54588 | 2 |
| CAAGACT | 299675 | 0.0 | 139.39604 | 1 |
| GAGCTGA | 344850 | 0.0 | 139.33621 | 1 |
| CGAACTT | 203920 | 0.0 | 138.83348 | 1 |
| GAACTTA | 203580 | 0.0 | 138.70398 | 2 |
| CAAGCTA | 178785 | 0.0 | 138.64784 | 2 |
| GGCATAT | 215625 | 0.0 | 137.82396 | 3 |
| GAGTCAA | 136485 | 0.0 | 137.61174 | 2 |
| AGAGTCA | 137445 | 0.0 | 137.5909 | 1 |
| ACTTCGA | 136070 | 0.0 | 137.27469 | 2 |
| CAATGGA | 325485 | 0.0 | 137.2337 | 1 |
| AGTCACT | 377475 | 0.0 | 137.00478 | 1 |
| AGACTAT | 149790 | 0.0 | 136.98053 | 3 |
| CCGAAGT | 541245 | 0.0 | 136.476 | 1 |
| ACAAGCT | 182660 | 0.0 | 136.30832 | 1 |