Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211806_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 99881094 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 407828 | 0.40831350926132226 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 341978 | 0.34238511644656194 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 232461 | 0.23273773913609716 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGAT | 107496 | 0.10762397135938458 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGGACTCTGCGTTGAT | 103985 | 0.10410879159973958 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGTGAT | 557575 | 0.0 | 141.78833 | 2 |
| AACGTGA | 543125 | 0.0 | 141.4675 | 1 |
| ACGTATC | 274585 | 0.0 | 139.84209 | 1 |
| ATGCCTA | 225125 | 0.0 | 139.44826 | 1 |
| AACATCG | 465230 | 0.0 | 139.23299 | 2 |
| CTCAATG | 322415 | 0.0 | 139.05737 | 1 |
| GTCACTA | 184315 | 0.0 | 138.26546 | 2 |
| AGTCACT | 185640 | 0.0 | 138.02538 | 1 |
| CGCATAC | 392990 | 0.0 | 137.8436 | 1 |
| TGCCTAA | 226510 | 0.0 | 137.74814 | 2 |
| CGAACTT | 155715 | 0.0 | 137.48795 | 1 |
| CGTGATG | 204450 | 0.0 | 137.32378 | 3 |
| CAAGCTA | 207340 | 0.0 | 137.04462 | 2 |
| ACGCTTA | 179005 | 0.0 | 136.30032 | 2 |
| CCGAAGT | 153345 | 0.0 | 135.7903 | 1 |
| ACAAGCT | 210490 | 0.0 | 135.6099 | 1 |
| CAAGACT | 194160 | 0.0 | 135.32887 | 1 |
| CGTGATT | 191515 | 0.0 | 134.79353 | 3 |
| TCAATGA | 329605 | 0.0 | 134.24318 | 2 |
| ACATCGA | 157490 | 0.0 | 133.72354 | 3 |