Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211775_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 96402567 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 1343124 | 1.3932450574682311 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 238678 | 0.24758469346568335 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 191606 | 0.19875611818511016 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 189365 | 0.19643149129006077 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAGTTGAGTGCTGAAAAA | 117164 | 0.12153618274500927 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 112425 | 0.11662033854347469 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGGAAGACTCTGGGCATTC | 110857 | 0.11499382583868333 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 105024 | 0.10894315708418842 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTCCTTGCTATAGAAGACC | 102849 | 0.10668699309635604 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 4689750 | 0.0 | 139.61339 | 1 |
| GTGGTAT | 4697545 | 0.0 | 139.00993 | 6 |
| GGTATCA | 4669535 | 0.0 | 138.94603 | 8 |
| TGGTATC | 4687320 | 0.0 | 138.69243 | 7 |
| GTATCAA | 4694025 | 0.0 | 138.68025 | 9 |
| AGCAGTG | 4706095 | 0.0 | 138.63268 | 2 |
| CAGTGGT | 4725480 | 0.0 | 138.08937 | 4 |
| AGTGGTA | 4731985 | 0.0 | 137.97264 | 5 |
| GCAGTGG | 4791385 | 0.0 | 136.10616 | 3 |
| GGTATAA | 47710 | 0.0 | 65.404465 | 8 |
| TGGTATA | 51455 | 0.0 | 60.979866 | 7 |
| GGTATCG | 14365 | 0.0 | 58.314285 | 8 |
| GTATCGA | 14645 | 0.0 | 57.39571 | 9 |
| GCAGTTG | 63655 | 0.0 | 36.76623 | 3 |
| TGTATCA | 63620 | 0.0 | 36.41287 | 8 |
| TTGTATC | 64140 | 0.0 | 36.308403 | 7 |
| GTTGTAT | 69970 | 0.0 | 33.3757 | 6 |
| GTATAAA | 106090 | 0.0 | 29.664091 | 9 |
| CAACGCA | 4666090 | 0.0 | 28.164417 | 10-14 |
| TCAACGC | 4676115 | 0.0 | 28.093418 | 10-14 |