Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211808_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 76691164 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 242386 | 0.3160546630900008 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 205654 | 0.2681586629719168 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCACGGACTCTGCGTTGATA | 126815 | 0.16535803264115276 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGGACTCTGCGTTGAT | 126669 | 0.16516765868881583 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 101950 | 0.1329357838407564 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 100247 | 0.1307151890405523 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 93195 | 0.12151986635644231 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGATA | 90863 | 0.11847909884377293 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCACGGACCCCGCGTTGATA | 90620 | 0.11816224356693816 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTCCCCACGGACCCCGCGTTGATA | 89143 | 0.11623633721350221 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 79193 | 0.1032622219686221 | Illumina Single End PCR Primer 1 (100% over 21bp) |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTGCGAA | 222600 | 0.0 | 140.8864 | 2 |
| CCTAATC | 416040 | 0.0 | 140.83186 | 1 |
| GCCACAT | 323410 | 0.0 | 140.6189 | 1 |
| TTCACGC | 274940 | 0.0 | 140.59323 | 1 |
| GTCTGTC | 182880 | 0.0 | 140.55043 | 1 |
| TATCAGC | 156105 | 0.0 | 140.4932 | 1 |
| TCACGCA | 259310 | 0.0 | 140.36633 | 2 |
| AAGTGTC | 169580 | 0.0 | 140.11746 | 3 |
| AACTCAC | 322620 | 0.0 | 139.94427 | 1 |
| TCAAGTG | 332665 | 0.0 | 139.93513 | 1 |
| CTAATCC | 379985 | 0.0 | 139.85205 | 2 |
| ATCAGCA | 150540 | 0.0 | 139.20361 | 2 |
| GGCTTCA | 247130 | 0.0 | 139.11227 | 2 |
| GGTGCGA | 239425 | 0.0 | 138.99309 | 1 |
| TGTTCTA | 329755 | 0.0 | 138.91812 | 2 |
| TCTGTCA | 177025 | 0.0 | 138.87495 | 2 |
| TGGAACA | 376900 | 0.0 | 138.83914 | 1 |
| TGGCTTC | 262395 | 0.0 | 138.72885 | 1 |
| GATGTAC | 122905 | 0.0 | 138.71568 | 2 |
| AGTGTCA | 73855 | 0.0 | 138.70041 | 4 |