Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211777_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 107474293 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 1853671 | 1.724757565979057 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 1315112 | 1.2236526180265266 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 856859 | 0.7972687943153067 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 556439 | 0.5177414844682905 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 400033 | 0.3722127299781353 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 265992 | 0.24749360295861633 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAGTTGAGTGCTGAAAAA | 180151 | 0.16762240994690703 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGAAAAAAAAAAAAAAAAAA | 159993 | 0.1488662967989936 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGAAAAAAAAAAAAAAAAA | 158864 | 0.14781581303354097 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 154416 | 0.1436771489159738 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC | 153610 | 0.14292720213567722 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCAAAAAAAAAAAAAAAAAA | 141894 | 0.13202599062456732 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAGAAAAAAAAAAAAAAAAAAA | 134639 | 0.12527553914683578 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 126852 | 0.11803008557590604 | No Hit |
| GTTTTGGCAATCCATTTCGGCAAAGAATTCACCCCTGAGGTGCAGGCTTC | 108616 | 0.10106230705793058 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 4998040 | 0.0 | 138.49438 | 1 |
| AGCAGTG | 5026765 | 0.0 | 137.4174 | 2 |
| GGTATCA | 5013905 | 0.0 | 137.20718 | 8 |
| GTGGTAT | 5035950 | 0.0 | 137.17058 | 6 |
| TGGTATC | 5029800 | 0.0 | 137.03055 | 7 |
| GTATCAA | 5035470 | 0.0 | 136.8892 | 9 |
| CAGTGGT | 5055195 | 0.0 | 136.65147 | 4 |
| AGTGGTA | 5062390 | 0.0 | 136.46881 | 5 |
| GCAGTGG | 5268810 | 0.0 | 131.07352 | 3 |
| GTATCGA | 13185 | 0.0 | 64.56819 | 9 |
| GGTATCG | 14390 | 0.0 | 59.111404 | 8 |
| GGTATAA | 37090 | 0.0 | 47.61374 | 8 |
| TGGTATA | 40275 | 0.0 | 44.11641 | 7 |
| TTGTATC | 49360 | 0.0 | 30.777096 | 7 |
| TGTATCA | 50860 | 0.0 | 29.82695 | 8 |
| GCAGTTG | 51550 | 0.0 | 29.680126 | 3 |
| GTTGTAT | 53085 | 0.0 | 28.685238 | 6 |
| CAACGCA | 5012335 | 0.0 | 27.786623 | 10-14 |
| ATCAACG | 5022210 | 0.0 | 27.693726 | 10-14 |
| CGCAGAG | 5025520 | 0.0 | 27.677696 | 15-19 |