Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211774_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 98907311 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 4451410 | 4.50058742371431 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 2688546 | 2.718247996854348 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 1159210 | 1.1720164953225753 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 1115692 | 1.1280177256057442 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 686916 | 0.6945047773060983 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 358664 | 0.36262637854950885 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGAAAAAAAAAAAAAAAAA | 321489 | 0.32504068379737877 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAGAAAAAAAAAAAAAAAAAAA | 257243 | 0.26008491930389255 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGAAAAAAAAAAAAAAAAAA | 237864 | 0.24049182774769803 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAAAAAAAAAAAAAAAAA | 213379 | 0.21573632711539395 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 152905 | 0.15459423419164636 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGAGAAAAAAAAAAAAAAA | 117097 | 0.11839064151688444 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAGAGAAAAAAAAAAAAAAAAA | 114764 | 0.11603186745214415 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTGGTAT | 4447510 | 0.0 | 140.85452 | 6 |
| GGTATCA | 4442620 | 0.0 | 140.84685 | 8 |
| AAGCAGT | 4460435 | 0.0 | 140.70369 | 1 |
| TGGTATC | 4457530 | 0.0 | 140.58167 | 7 |
| GTATCAA | 4461390 | 0.0 | 140.27267 | 9 |
| CAGTGGT | 4489655 | 0.0 | 139.81775 | 4 |
| AGCAGTG | 4492835 | 0.0 | 139.72632 | 2 |
| GCAGTGG | 4525770 | 0.0 | 138.65553 | 3 |
| AGTGGTA | 4568135 | 0.0 | 137.15753 | 5 |
| GGTATCG | 11210 | 0.0 | 65.832565 | 8 |
| GTATCGA | 11845 | 0.0 | 62.424904 | 9 |
| CAACGCA | 4438455 | 0.0 | 28.519407 | 10-14 |
| ATCAACG | 4439550 | 0.0 | 28.428268 | 10-14 |
| CGCAGAG | 4448915 | 0.0 | 28.39668 | 15-19 |
| TCAACGC | 4471525 | 0.0 | 28.312769 | 10-14 |
| GTACATG | 4425170 | 0.0 | 28.305182 | 20-24 |
| TACATGG | 4409365 | 0.0 | 28.298185 | 20-24 |
| CAGAGTA | 4450680 | 0.0 | 28.267906 | 15-19 |
| AGAGTAC | 4446035 | 0.0 | 28.235743 | 15-19 |
| AGTACAT | 4436595 | 0.0 | 28.223495 | 20-24 |