Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403962_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 97072801 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 35 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 3071189 | 3.1637997135778537 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 636500 | 0.6556934521751361 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 547287 | 0.5637902629388433 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 278939 | 0.2873503155636768 | No Hit |
| GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC | 249217 | 0.25673205824152534 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 115581 | 0.11906630777039184 | No Hit |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 106976 | 0.11020182677122915 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 104591 | 0.10774490786559254 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGAGTA | 281340 | 0.0 | 140.1756 | 1 |
| AGAGATC | 318415 | 0.0 | 139.85355 | 2 |
| ATAGCGA | 106585 | 0.0 | 139.72597 | 1 |
| CGAGTAA | 282755 | 0.0 | 139.36334 | 2 |
| GATAGAC | 110615 | 0.0 | 139.06354 | 1 |
| ATCCGTC | 221540 | 0.0 | 138.76387 | 2 |
| TAGCGAC | 107015 | 0.0 | 138.74823 | 2 |
| AGTTAGC | 142380 | 0.0 | 138.47058 | 2 |
| GGATTGC | 233545 | 0.0 | 138.41656 | 2 |
| GTCGTAG | 148410 | 0.0 | 138.07053 | 1 |
| GTGCGAA | 158930 | 0.0 | 138.04547 | 2 |
| CGGATTG | 233560 | 0.0 | 137.96439 | 1 |
| GGCTAAC | 173695 | 0.0 | 137.84718 | 2 |
| TCACGCA | 218275 | 0.0 | 137.45178 | 2 |
| GAGATCT | 182785 | 0.0 | 137.37221 | 3 |
| AGCACCT | 291780 | 0.0 | 137.28563 | 1 |
| ATGAATC | 109615 | 0.0 | 136.72495 | 2 |
| ACCTTAC | 445525 | 0.0 | 136.63188 | 2 |
| GAGATCA | 102295 | 0.0 | 136.39618 | 3 |
| TAAGGTC | 167340 | 0.0 | 135.62556 | 2 |