Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211735_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 62564680 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 364599 | 0.5827553181763256 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 196824 | 0.31459283416777645 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 156812 | 0.2506398178652876 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 3420465 | 0.0 | 135.74864 | 1 |
| TGGTATC | 3420715 | 0.0 | 134.6239 | 7 |
| AGTGGTA | 3442125 | 0.0 | 134.60289 | 5 |
| GGTATCA | 3422300 | 0.0 | 134.37164 | 8 |
| GTGGTAT | 3451740 | 0.0 | 134.34097 | 6 |
| AGCAGTG | 3451100 | 0.0 | 134.30916 | 2 |
| CAGTGGT | 3455735 | 0.0 | 134.00958 | 4 |
| GTATCAA | 3453595 | 0.0 | 133.9952 | 9 |
| GCAGTGG | 3549295 | 0.0 | 130.61334 | 3 |
| GTTGTAT | 46165 | 0.0 | 64.40741 | 6 |
| TGGTATA | 48640 | 0.0 | 63.172215 | 7 |
| GGTATAA | 48835 | 0.0 | 62.654667 | 8 |
| TTGTATC | 48585 | 0.0 | 61.12523 | 7 |
| GCAGTTG | 49370 | 0.0 | 60.1098 | 3 |
| CAGTTGT | 50035 | 0.0 | 59.38441 | 4 |
| GTATCGA | 7545 | 0.0 | 55.235157 | 9 |
| GGTATCG | 7865 | 0.0 | 52.71294 | 8 |
| AGTTGTA | 59010 | 0.0 | 50.521706 | 5 |
| TGTATCA | 60105 | 0.0 | 49.373764 | 8 |
| AGCAGTT | 66965 | 0.0 | 44.49873 | 2 |