Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403970_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 96648813 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 484365 | 0.5011598021384909 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 454493 | 0.47025202471964145 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 368541 | 0.3813197374705471 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 360370 | 0.3728654173952452 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CAAGCTA | 600940 | 0.0 | 142.08177 | 2 |
| CTCAATG | 733500 | 0.0 | 141.72226 | 1 |
| AACGTGA | 292535 | 0.0 | 141.14676 | 1 |
| ACGTGAT | 293330 | 0.0 | 141.13667 | 2 |
| ACAAGCT | 605815 | 0.0 | 141.07314 | 1 |
| ACGTATC | 260080 | 0.0 | 141.0411 | 1 |
| GAGCTGA | 271215 | 0.0 | 140.08556 | 1 |
| ATGCCTA | 388520 | 0.0 | 139.87222 | 1 |
| AAGCTAG | 192475 | 0.0 | 139.75049 | 3 |
| TCAATGA | 744145 | 0.0 | 139.31042 | 2 |
| GATCGCA | 163415 | 0.0 | 139.0929 | 2 |
| AGAGTCA | 156750 | 0.0 | 138.8163 | 1 |
| AGCTGAA | 273030 | 0.0 | 138.44482 | 2 |
| AGATCGC | 164180 | 0.0 | 138.4104 | 1 |
| GAGTCAA | 157790 | 0.0 | 137.83647 | 2 |
| AAGCTAT | 230070 | 0.0 | 137.7905 | 3 |
| TGCCTAA | 394790 | 0.0 | 137.76387 | 2 |
| AGATCTG | 146610 | 0.0 | 137.553 | 2 |
| AACATCG | 179425 | 0.0 | 137.43616 | 2 |
| CGAACTT | 231205 | 0.0 | 137.17474 | 1 |