Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403972_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 56170599 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 760242 | 1.3534518298442928 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 225705 | 0.4018205324817704 | No Hit |
| ACCTCTGCTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG | 131332 | 0.23380914987216 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 126878 | 0.2258797346989303 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 99550 | 0.1772279480231286 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 87656 | 0.1560531693813698 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATGCCTA | 184370 | 0.0 | 142.24141 | 1 |
| ACGTATC | 109925 | 0.0 | 141.82468 | 1 |
| CATCAAG | 124625 | 0.0 | 141.38034 | 1 |
| AGAGTCA | 103605 | 0.0 | 141.31126 | 1 |
| ATCGCAT | 112500 | 0.0 | 141.002 | 3 |
| GAGTCAA | 103350 | 0.0 | 140.77647 | 2 |
| TGCCTAA | 185010 | 0.0 | 140.75719 | 2 |
| ATCCTGT | 225965 | 0.0 | 140.5213 | 1 |
| ACGTGAT | 130220 | 0.0 | 140.51726 | 2 |
| CAAGCTA | 151905 | 0.0 | 140.49236 | 2 |
| GATCGCA | 205675 | 0.0 | 140.4909 | 2 |
| AACGTGA | 130235 | 0.0 | 140.46245 | 1 |
| AGTCACT | 90580 | 0.0 | 140.41919 | 1 |
| AAGGTAC | 136825 | 0.0 | 140.24205 | 1 |
| GCTCGAT | 100990 | 0.0 | 139.96536 | 3 |
| AGCAGAT | 88805 | 0.0 | 139.89447 | 3 |
| ACAAGCT | 154450 | 0.0 | 139.85973 | 1 |
| GTCACTA | 90380 | 0.0 | 139.82071 | 2 |
| ACGCTTA | 80170 | 0.0 | 139.80101 | 2 |
| AAGACTA | 102695 | 0.0 | 139.72537 | 2 |