Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211756_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 51394356 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 189351 | 0.3684276148921878 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 138124 | 0.26875324597899425 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 121934 | 0.23725173246649886 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 108150 | 0.21043166685462505 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 2688060 | 0.0 | 139.98505 | 1 |
| AGCAGTG | 2736050 | 0.0 | 136.911 | 2 |
| GTGGTAT | 2737690 | 0.0 | 136.7423 | 6 |
| TGGTATC | 2722855 | 0.0 | 136.69736 | 7 |
| AGTGGTA | 2741710 | 0.0 | 136.56667 | 5 |
| CAGTGGT | 2743695 | 0.0 | 136.43166 | 4 |
| GGTATCA | 2731825 | 0.0 | 136.29707 | 8 |
| GTATCAA | 2754325 | 0.0 | 135.7485 | 9 |
| GCAGTGG | 2791505 | 0.0 | 134.09464 | 3 |
| GGTATAA | 36335 | 0.0 | 50.538544 | 8 |
| TGGTATA | 36295 | 0.0 | 50.534317 | 7 |
| GTTGTAT | 39700 | 0.0 | 41.050507 | 6 |
| GCAGTTG | 40100 | 0.0 | 40.918392 | 3 |
| TTGTATC | 41505 | 0.0 | 39.108067 | 7 |
| CAGTTGT | 44140 | 0.0 | 37.134785 | 4 |
| TGTATCA | 44520 | 0.0 | 36.492146 | 8 |
| CACGCAG | 21375 | 0.0 | 33.310165 | 145 |
| CGGTCTG | 8420 | 0.0 | 31.947231 | 145 |
| AGCAGTT | 52585 | 0.0 | 31.485577 | 2 |
| GTATAAA | 61660 | 0.0 | 29.969467 | 9 |