Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403971_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 92003710 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 2825284 | 3.0708370347239256 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 1003976 | 1.0912342556620813 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC | 990355 | 1.0764294179006477 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACACTCGCTTCTGGAACG | 451363 | 0.4905921728591162 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACTCTTCTGGTCCCCACAG | 449094 | 0.4881259679636832 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 428489 | 0.4657301319696782 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 366928 | 0.39881869981112716 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 319177 | 0.3469175319125718 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 312116 | 0.33924284140280864 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 305287 | 0.3318203146373119 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 297992 | 0.3238912865579008 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACACTCGCTTCTGGAACGT | 294399 | 0.319986009259844 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 201085 | 0.21856183843021113 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 186913 | 0.20315811177614465 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 170216 | 0.18500993057779952 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAATCTTAGTTCAACTTTAA | 123527 | 0.13426306395687737 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTCTTGCTTCAAC | 115764 | 0.12582536073817024 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 101149 | 0.10994013176207784 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT | 96682 | 0.10508489277225885 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 5402555 | 0.0 | 115.05211 | 1 |
| AGCAGTG | 5549525 | 0.0 | 111.966736 | 2 |
| GTATCAA | 5564495 | 0.0 | 111.680916 | 9 |
| AGTGGTA | 5566410 | 0.0 | 111.65427 | 5 |
| GGTATCA | 5577750 | 0.0 | 111.35743 | 8 |
| CAGTGGT | 5603765 | 0.0 | 110.89303 | 4 |
| GTGGTAT | 5609375 | 0.0 | 110.80162 | 6 |
| TGGTATC | 5623735 | 0.0 | 110.429955 | 7 |
| GCAGTGG | 5794435 | 0.0 | 107.24562 | 3 |
| ACACTCG | 211705 | 0.0 | 26.877829 | 30-34 |
| CATGGGG | 1833175 | 0.0 | 26.194141 | 25-29 |
| GGTCGGC | 180675 | 0.0 | 26.042435 | 115-119 |
| CGCTTCT | 223580 | 0.0 | 25.998453 | 35-39 |
| CGTCAAG | 177065 | 0.0 | 25.950981 | 95-99 |
| ACGTCAA | 173905 | 0.0 | 25.900858 | 95-99 |
| ATGGGGG | 631030 | 0.0 | 25.83139 | 25-29 |
| TGCCGAC | 182625 | 0.0 | 25.820812 | 80-84 |
| CTGGCGA | 177450 | 0.0 | 25.793531 | 130-134 |
| CTGCCGA | 183375 | 0.0 | 25.523602 | 80-84 |
| AAGGTCG | 171885 | 0.0 | 25.411373 | 115-119 |