Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211758_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 72718603 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 540968 | 0.74391968173536 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 207156 | 0.2848734594090043 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 156587 | 0.21533279455327273 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 3399530 | 0.0 | 139.94139 | 1 |
| TGGTATC | 3390165 | 0.0 | 139.39755 | 7 |
| AGTGGTA | 3407520 | 0.0 | 139.32526 | 5 |
| GTGGTAT | 3411230 | 0.0 | 139.12076 | 6 |
| GGTATCA | 3403300 | 0.0 | 138.93994 | 8 |
| AGCAGTG | 3414150 | 0.0 | 138.9388 | 2 |
| CAGTGGT | 3418770 | 0.0 | 138.79391 | 4 |
| GTATCAA | 3433085 | 0.0 | 138.24622 | 9 |
| GCAGTGG | 3522475 | 0.0 | 134.59702 | 3 |
| TGGTATA | 43660 | 0.0 | 56.282135 | 7 |
| GGTATAA | 44355 | 0.0 | 55.254158 | 8 |
| GTTGTAT | 38995 | 0.0 | 45.86281 | 6 |
| GCAGTTG | 40570 | 0.0 | 44.312706 | 3 |
| CAGTTGT | 41385 | 0.0 | 43.527363 | 4 |
| TTGTATC | 42125 | 0.0 | 42.574722 | 7 |
| GGTGCGA | 13735 | 0.0 | 34.099854 | 1 |
| AGTTGTA | 53315 | 0.0 | 33.828003 | 5 |
| TGCGAAT | 4905 | 0.0 | 33.493347 | 3 |
| TGTATCA | 54815 | 0.0 | 32.797226 | 8 |
| GTATAAA | 75120 | 0.0 | 32.74012 | 9 |