Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403978_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 88502134 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 922488 | 1.0423341882355064 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTAATCCCAGCACTTTGGGA | 133073 | 0.1503613460891237 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCACGCCTGTAATCCCAGCAC | 120562 | 0.13622496379578825 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCATGCCTGTAATCCCAGCAC | 99198 | 0.1120854328778106 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 97957 | 0.11068320680267438 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCTTTGGGAGGCCGAGGCGGG | 97874 | 0.11058942375333006 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 5925335 | 0.0 | 135.19914 | 1 |
| AGCAGTG | 6027660 | 0.0 | 132.85294 | 2 |
| AGTGGTA | 6031445 | 0.0 | 132.80586 | 5 |
| TGGTATC | 6037800 | 0.0 | 132.64288 | 7 |
| GGTATCA | 6070350 | 0.0 | 132.2932 | 8 |
| GTGGTAT | 6054375 | 0.0 | 132.28836 | 6 |
| CAGTGGT | 6065690 | 0.0 | 132.03116 | 4 |
| GTATCAA | 6085545 | 0.0 | 132.01802 | 9 |
| GCAGTGG | 6267145 | 0.0 | 127.72992 | 3 |
| CGGTATC | 8065 | 0.0 | 69.09703 | 7 |
| AGCGGTA | 8135 | 0.0 | 68.59093 | 5 |
| GCGGTAT | 8225 | 0.0 | 67.75285 | 6 |
| AGGGGTA | 28140 | 0.0 | 38.122795 | 5 |
| CAGCGGT | 14920 | 0.0 | 37.736397 | 4 |
| AGCAGCG | 17595 | 0.0 | 32.191574 | 2 |
| AGGTATC | 23795 | 0.0 | 28.68438 | 7 |
| CAACGCA | 6048810 | 0.0 | 27.115255 | 10-14 |
| AACGCAG | 6056675 | 0.0 | 27.064354 | 10-14 |
| TCAACGC | 6056005 | 0.0 | 27.052034 | 10-14 |
| ATCAACG | 6050820 | 0.0 | 27.00539 | 10-14 |