Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403966_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 154023676 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 4053364 | 2.6316499549069325 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 2055974 | 1.3348428328642148 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1551115 | 1.007062706385478 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 494951 | 0.32134734922181707 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 493050 | 0.3201131233876018 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 166859 | 0.1083333448034314 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAAGGTC | 881120 | 0.0 | 142.6617 | 2 |
| AACATCG | 904635 | 0.0 | 142.26958 | 2 |
| TAGGATG | 515875 | 0.0 | 140.75163 | 1 |
| CTAAGGT | 894960 | 0.0 | 140.589 | 1 |
| ACATCGA | 303560 | 0.0 | 140.22581 | 3 |
| GGCTAAC | 289745 | 0.0 | 139.82436 | 2 |
| ATAGCGA | 150565 | 0.0 | 139.79805 | 1 |
| GTCTGTC | 527590 | 0.0 | 139.44896 | 1 |
| AGGATGA | 518390 | 0.0 | 139.39088 | 2 |
| TCTGTCA | 528915 | 0.0 | 138.9362 | 2 |
| AAGGTCG | 226305 | 0.0 | 138.81395 | 3 |
| TAGCGAC | 151730 | 0.0 | 138.59402 | 2 |
| AGTTAGC | 109890 | 0.0 | 137.8353 | 2 |
| AAGGTCA | 297790 | 0.0 | 137.7768 | 3 |
| GATAGAC | 115065 | 0.0 | 137.7165 | 1 |
| ACATCGT | 329880 | 0.0 | 137.42142 | 3 |
| AGGCTAA | 296295 | 0.0 | 136.91405 | 1 |
| ATGCCTA | 259495 | 0.0 | 136.53468 | 1 |
| CTGTCAT | 269935 | 0.0 | 136.35117 | 3 |
| GAGCTGA | 191815 | 0.0 | 136.20378 | 1 |