Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211779_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 129224430 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 35 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 3658685 | 2.831264181238795 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1356428 | 1.0496683947454828 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1270474 | 0.9831531081235955 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 944135 | 0.7306164941102855 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 375936 | 0.29091712766695893 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATA | 338605 | 0.26202862724950693 | No Hit |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 160748 | 0.12439443532465184 | No Hit |
| GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC | 135016 | 0.10448179187170722 | No Hit |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 131002 | 0.10137556807176475 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 340130 | 0.0 | 141.41045 | 1 |
| GGCTAAC | 319895 | 0.0 | 140.5314 | 2 |
| GATAGAC | 231260 | 0.0 | 140.17096 | 1 |
| TAGCGAC | 343535 | 0.0 | 140.08893 | 2 |
| ATGAATC | 291415 | 0.0 | 139.97502 | 2 |
| GCGAGTA | 344320 | 0.0 | 139.30276 | 1 |
| CGAGTAA | 345520 | 0.0 | 139.20078 | 2 |
| TGGAACA | 495290 | 0.0 | 138.98827 | 1 |
| TATCAGC | 309415 | 0.0 | 138.85857 | 1 |
| ATCAGCA | 309915 | 0.0 | 138.7075 | 2 |
| CCGACAA | 380510 | 0.0 | 138.35718 | 1 |
| TCACGCA | 371550 | 0.0 | 137.78131 | 2 |
| AGTTAGC | 156650 | 0.0 | 137.634 | 2 |
| AGGCTAA | 324720 | 0.0 | 137.58662 | 1 |
| GATGTAC | 275995 | 0.0 | 137.18315 | 2 |
| ATAGACA | 238680 | 0.0 | 137.11594 | 2 |
| CAGTGAC | 276060 | 0.0 | 136.64545 | 5 |
| GGAACAA | 503745 | 0.0 | 136.40166 | 2 |
| CGACAAC | 389150 | 0.0 | 136.29932 | 2 |
| GCTAACT | 164945 | 0.0 | 136.19064 | 3 |