Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211752_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 63470696 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 1026315 | 1.6169903036828206 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 913535 | 1.4393020048180973 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 193355 | 0.3046366468078434 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 114280 | 0.18005159420341002 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 91309 | 0.14386008938676204 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 91195 | 0.14368047894102184 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 77666 | 0.12236513051629369 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 3140180 | 0.0 | 123.141464 | 1 |
| AGTGGTA | 3194325 | 0.0 | 120.61632 | 5 |
| GGTATCA | 3185755 | 0.0 | 120.540276 | 8 |
| GTGGTAT | 3197535 | 0.0 | 120.48639 | 6 |
| AGCAGTG | 3199745 | 0.0 | 120.44373 | 2 |
| TGGTATC | 3190970 | 0.0 | 120.28785 | 7 |
| GTATCAA | 3204725 | 0.0 | 120.187805 | 9 |
| CAGTGGT | 3212300 | 0.0 | 119.91509 | 4 |
| GCAGTGG | 3261765 | 0.0 | 118.08192 | 3 |
| GGTATAA | 35420 | 0.0 | 39.46153 | 8 |
| TGGTATA | 38190 | 0.0 | 36.637264 | 7 |
| CGGTCTG | 13010 | 0.0 | 29.984798 | 145 |
| CGCATAC | 5955 | 0.0 | 28.153856 | 1 |
| CATGGGG | 1002745 | 0.0 | 25.966127 | 25-29 |
| GCAGTTG | 47340 | 0.0 | 25.570112 | 3 |
| ATGGGGG | 330475 | 0.0 | 25.429396 | 25-29 |
| ACATGGG | 3050160 | 0.0 | 24.96729 | 20-24 |
| AGAGTAC | 3189075 | 0.0 | 24.758974 | 15-19 |
| TACATGG | 3157750 | 0.0 | 24.736109 | 20-24 |
| CAGAGTA | 3191660 | 0.0 | 24.732105 | 15-19 |