Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211780_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 139217999 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 3753178 | 2.6958999748301222 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1711522 | 1.2293827035971117 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 299584 | 0.21519056598421588 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATAC | 264379 | 0.18990288748511605 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 215685 | 0.15492608825673468 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 212935 | 0.15295076895912002 | No Hit |
| CTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTT | 188347 | 0.1352892595446656 | No Hit |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 171694 | 0.12332744417623759 | No Hit |
| CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT | 153738 | 0.1104296866097034 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATGCCTA | 278360 | 0.0 | 140.72752 | 1 |
| AGTCACT | 253780 | 0.0 | 140.18251 | 1 |
| GCGTGAC | 440170 | 0.0 | 140.06523 | 5 |
| AGAGTCA | 210440 | 0.0 | 140.05069 | 1 |
| ACGTGAT | 233795 | 0.0 | 139.96487 | 2 |
| CTCAATG | 442020 | 0.0 | 139.8025 | 1 |
| TGCCTAA | 280700 | 0.0 | 139.4437 | 2 |
| AACGTGA | 235450 | 0.0 | 139.43707 | 1 |
| CAAGCTA | 230485 | 0.0 | 139.38837 | 2 |
| GAACTTA | 282395 | 0.0 | 139.36397 | 2 |
| CGAACTT | 281995 | 0.0 | 139.31207 | 1 |
| GAGTCAA | 209620 | 0.0 | 139.31068 | 2 |
| CAATGGA | 591825 | 0.0 | 139.30705 | 1 |
| GTCACTA | 256080 | 0.0 | 138.95232 | 2 |
| CGACTGG | 208235 | 0.0 | 138.23979 | 1 |
| GGCGTGA | 491605 | 0.0 | 138.10274 | 4 |
| TCAATGA | 449365 | 0.0 | 137.75838 | 2 |
| ACAAGCT | 234610 | 0.0 | 137.3321 | 1 |
| AAGACTA | 197980 | 0.0 | 136.95848 | 2 |
| AAGGTAC | 200720 | 0.0 | 136.80722 | 1 |