Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211738_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 115072334 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 947692 | 0.8235619866717921 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 495244 | 0.43037625360062653 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 415287 | 0.36089213242168183 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 255605 | 0.2221255023818323 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 247025 | 0.21466932268880545 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 230010 | 0.19988297100152677 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 178427 | 0.155056383926305 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCTAAACCTAGCCCCAAACCC | 123998 | 0.10775656988064569 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 122301 | 0.10628184529567289 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 5480355 | 0.0 | 132.48256 | 1 |
| GTGGTAT | 5531280 | 0.0 | 131.31587 | 6 |
| GGTATCA | 5532170 | 0.0 | 131.30475 | 8 |
| TGGTATC | 5542015 | 0.0 | 131.0797 | 7 |
| AGCAGTG | 5552220 | 0.0 | 130.78171 | 2 |
| GTATCAA | 5556595 | 0.0 | 130.76169 | 9 |
| CAGTGGT | 5563625 | 0.0 | 130.55547 | 4 |
| AGTGGTA | 5588610 | 0.0 | 129.95848 | 5 |
| GCAGTGG | 5795960 | 0.0 | 125.317764 | 3 |
| CATGGGG | 2091445 | 0.0 | 27.115742 | 25-29 |
| CAACGCA | 5510610 | 0.0 | 26.832838 | 10-14 |
| ATCAACG | 5522775 | 0.0 | 26.7045 | 10-14 |
| TCAACGC | 5536640 | 0.0 | 26.701618 | 10-14 |
| CGCAGAG | 5517705 | 0.0 | 26.688602 | 15-19 |
| ACATGGG | 5436500 | 0.0 | 26.671608 | 20-24 |
| TACATGG | 5527250 | 0.0 | 26.640882 | 20-24 |
| AGAGTAC | 5542520 | 0.0 | 26.602684 | 15-19 |
| GTACATG | 5538915 | 0.0 | 26.598263 | 20-24 |
| GCAGAGT | 5548790 | 0.0 | 26.58069 | 15-19 |
| CAGAGTA | 5558895 | 0.0 | 26.540476 | 15-19 |