Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403967_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 205052838 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 39155234 | 19.095192430353 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 3553200 | 1.7328216642385608 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 1364077 | 0.6652319535318989 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 948950 | 0.4627831583584325 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 693918 | 0.3384093615909866 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 552850 | 0.2696134349527998 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 350843 | 0.17109882673264926 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTTGACCTCGGATCAGGTAG | 330192 | 0.16102776397564417 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCACTATAGGCCCCTTATATT | 266209 | 0.12982458696816476 | No Hit |
| AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA | 258415 | 0.12602361543515922 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCAAAAAAAAAAAAAAAAAAA | 254640 | 0.12418262652868037 | No Hit |
| CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT | 243542 | 0.1187703629832229 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 226026 | 0.11022817445716113 | No Hit |
| CAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGT | 221204 | 0.10787658544867348 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 28616985 | 0.0 | 72.088554 | 1 |
| AGTGGTA | 29630865 | 0.0 | 69.63302 | 5 |
| AGCAGTG | 29636525 | 0.0 | 69.5902 | 2 |
| GTATCAA | 29825825 | 0.0 | 69.09394 | 9 |
| CAGTGGT | 30206180 | 0.0 | 68.27822 | 4 |
| GGTATCA | 30291675 | 0.0 | 68.00948 | 8 |
| GCAGTGG | 30425595 | 0.0 | 67.76954 | 3 |
| TGGTATC | 30615505 | 0.0 | 67.37848 | 7 |
| GTGGTAT | 30644580 | 0.0 | 67.328964 | 6 |
| ATGGGCT | 977445 | 0.0 | 22.403381 | 25-29 |
| ATGGGGG | 1006780 | 0.0 | 21.96189 | 25-29 |
| ATGGGGC | 652705 | 0.0 | 21.73504 | 25-29 |
| ATGGGGT | 824600 | 0.0 | 21.16109 | 25-29 |
| CATGGGG | 3713065 | 0.0 | 20.825197 | 25-29 |
| TGGGCAT | 456305 | 0.0 | 20.416689 | 25-29 |
| CATGGGC | 3623760 | 0.0 | 20.170362 | 25-29 |
| TGGGCTT | 375815 | 0.0 | 19.375511 | 25-29 |
| ATGGGAT | 1223995 | 0.0 | 19.234407 | 25-29 |
| GGGCTAA | 123820 | 0.0 | 19.21483 | 25-29 |
| ATGGGCG | 597240 | 0.0 | 18.88529 | 25-29 |