Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211797_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 37819029 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 39 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 2373440 | 6.275782490343684 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 428924 | 1.1341486318963927 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 267999 | 0.7086353274696714 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAGTTGAGTGCTGAAAAA | 157610 | 0.41674787578496525 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 92831 | 0.24546108785606316 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 70900 | 0.187471761900603 | No Hit |
| GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTAC | 65240 | 0.17250575100698645 | No Hit |
| AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA | 64248 | 0.1698827328432996 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 53648 | 0.14185451456196826 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 53544 | 0.1415795207222269 | No Hit |
| CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGT | 51476 | 0.1361113739858313 | No Hit |
| CAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGT | 50041 | 0.13231698783170767 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 47818 | 0.12643899450723603 | No Hit |
| GCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG | 47424 | 0.12539719092206203 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 46276 | 0.1223616819987631 | No Hit |
| GGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGC | 45171 | 0.11943987245151112 | No Hit |
| GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT | 41348 | 0.10933120466948001 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAGAGATGTTGTTGAAAA | 38593 | 0.10204651208786984 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 2900745 | 0.0 | 77.14881 | 1 |
| CGACTGG | 9320 | 0.0 | 76.47756 | 1 |
| AGCAGTG | 2981310 | 0.0 | 74.7726 | 2 |
| CGAAGTA | 6105 | 0.0 | 74.58411 | 2 |
| AGTGGTA | 2997225 | 0.0 | 73.918785 | 5 |
| CAGTGGT | 3014785 | 0.0 | 73.4892 | 4 |
| GTATCAA | 3020055 | 0.0 | 73.46489 | 9 |
| GGTATCA | 3017850 | 0.0 | 73.31028 | 8 |
| GTGGTAT | 3028930 | 0.0 | 73.10507 | 6 |
| GCAGTGG | 3037505 | 0.0 | 72.98634 | 3 |
| TGGTATC | 3029035 | 0.0 | 72.93915 | 7 |
| CCGAAGT | 7300 | 0.0 | 63.371532 | 1 |
| ACGTATC | 5630 | 0.0 | 59.501785 | 1 |
| CGCATAC | 5180 | 0.0 | 59.491592 | 1 |
| AACCGAG | 8655 | 0.0 | 44.988716 | 1 |
| GACTAGT | 11155 | 0.0 | 44.39638 | 1 |
| ACCGAGA | 9425 | 0.0 | 40.69552 | 2 |
| CGCTCGA | 3410 | 0.0 | 39.761204 | 2 |
| ACGCTCG | 3665 | 0.0 | 36.996788 | 1 |
| CGTGATT | 6260 | 0.0 | 36.60033 | 3 |