Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403968_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 91578731 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 6142783 | 6.707652456988075 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 927649 | 1.0129524507169685 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 315979 | 0.3450353554254863 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 263062 | 0.2872522878702043 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 209435 | 0.2286939311268683 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 207741 | 0.22684415664156776 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 184046 | 0.20097024493602123 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 149093 | 0.16280308579510674 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 138756 | 0.15151553039100313 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 133026 | 0.14525861905642698 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAATCTTAGTTCAACTTTAA | 123356 | 0.13469939870645292 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 92752 | 0.10128115883151952 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 8126790 | 0.0 | 100.29985 | 1 |
| AGCAGTG | 8362440 | 0.0 | 97.44899 | 2 |
| AGTGGTA | 8365585 | 0.0 | 97.43061 | 5 |
| GTATCAA | 8371195 | 0.0 | 97.37366 | 9 |
| GGTATCA | 8419545 | 0.0 | 96.77668 | 8 |
| CAGTGGT | 8455740 | 0.0 | 96.38638 | 4 |
| GTGGTAT | 8484490 | 0.0 | 96.06824 | 6 |
| TGGTATC | 8482375 | 0.0 | 96.049324 | 7 |
| GCAGTGG | 8578490 | 0.0 | 94.99392 | 3 |
| CATGGGG | 2111875 | 0.0 | 25.338923 | 25-29 |
| ATGGGGG | 696470 | 0.0 | 25.237415 | 25-29 |
| ATGGGGT | 503285 | 0.0 | 24.842678 | 25-29 |
| ATGGGGC | 456250 | 0.0 | 23.759064 | 25-29 |
| ATGGGAT | 732535 | 0.0 | 22.972328 | 25-29 |
| CATGGGC | 820310 | 0.0 | 22.616846 | 25-29 |
| ATGGGGA | 618945 | 0.0 | 22.409184 | 25-29 |
| ATGGGCT | 295125 | 0.0 | 22.270517 | 25-29 |
| ATGGGAG | 802640 | 0.0 | 22.263304 | 25-29 |
| CATGGGT | 530005 | 0.0 | 22.072315 | 25-29 |
| AAACCGC | 77900 | 0.0 | 21.387524 | 85-89 |