Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211768_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 73046048 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 267818 | 0.3666426963988524 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC | 96794 | 0.13251093337725814 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 94132 | 0.12886665682447324 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 82173 | 0.11249479232606806 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 77553 | 0.1061700148377637 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 5418200 | 0.0 | 139.62994 | 1 |
| AGCAGTG | 5527385 | 0.0 | 136.83087 | 2 |
| AGTGGTA | 5424330 | 0.0 | 136.61148 | 5 |
| CAGTGGT | 5456240 | 0.0 | 136.30705 | 4 |
| TGGTATC | 5427465 | 0.0 | 136.2873 | 7 |
| GTGGTAT | 5438990 | 0.0 | 136.22818 | 6 |
| GGTATCA | 5399745 | 0.0 | 135.69362 | 8 |
| GTATCAA | 5411250 | 0.0 | 135.35114 | 9 |
| GCAGTGG | 5676310 | 0.0 | 133.21349 | 3 |
| GTATCGA | 40615 | 0.0 | 129.93823 | 9 |
| GGTATCG | 40830 | 0.0 | 129.46552 | 8 |
| GTGGGAT | 121360 | 0.0 | 95.48623 | 6 |
| CAGTGGG | 129505 | 0.0 | 90.41835 | 4 |
| GGATCAA | 138325 | 0.0 | 80.70596 | 9 |
| AGTGGGA | 157650 | 0.0 | 73.58808 | 5 |
| AGTGGTC | 37440 | 0.0 | 69.72909 | 5 |
| GTGGTCT | 47730 | 0.0 | 54.847122 | 6 |
| GGGATCA | 204470 | 0.0 | 54.682465 | 8 |
| GTATCCA | 42315 | 0.0 | 52.444817 | 9 |
| TGGGATC | 237415 | 0.0 | 48.373474 | 7 |