Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403961_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 90772425 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1014060 | 1.1171454326575498 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 661887 | 0.7291718823199886 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 406227 | 0.44752247171979814 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 130992 | 0.1443081420376287 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGTATC | 192715 | 0.0 | 140.67833 | 1 |
| ATGCCTA | 227080 | 0.0 | 140.48602 | 1 |
| CGTGAGA | 335955 | 0.0 | 140.41641 | 2 |
| CAAGCTA | 270905 | 0.0 | 140.40063 | 2 |
| ACGTGAT | 206735 | 0.0 | 140.28584 | 2 |
| GATCGCA | 285385 | 0.0 | 140.15193 | 2 |
| AGATCGC | 287290 | 0.0 | 139.59802 | 1 |
| CCGTGAG | 340325 | 0.0 | 139.31567 | 1 |
| AAGACTA | 254165 | 0.0 | 139.2796 | 2 |
| AACGTGA | 208490 | 0.0 | 139.0479 | 1 |
| GCTGATC | 236630 | 0.0 | 138.83228 | 2 |
| ACTTCGA | 132965 | 0.0 | 138.60858 | 2 |
| TGCCTAA | 230100 | 0.0 | 138.51347 | 2 |
| CGCATAC | 195640 | 0.0 | 138.50877 | 1 |
| ACGCTTA | 151670 | 0.0 | 138.45721 | 2 |
| CAAGACT | 256310 | 0.0 | 138.30263 | 1 |
| ACAAGCT | 275815 | 0.0 | 138.30244 | 1 |
| AGAGTCA | 145425 | 0.0 | 138.10233 | 1 |
| GCATACA | 195735 | 0.0 | 138.05382 | 2 |
| CTGTAGC | 201215 | 0.0 | 138.02899 | 1 |