Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403968_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 91578731 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 570113 | 0.622538654745063 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 305905 | 0.3340349846079435 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 258916 | 0.28272503579461045 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 198828 | 0.21711154743998362 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATAGAC | 407700 | 0.0 | 142.57765 | 1 |
| GCGAGTA | 361970 | 0.0 | 142.24234 | 1 |
| ATAGCGA | 227395 | 0.0 | 142.14253 | 1 |
| ATCCGTC | 708680 | 0.0 | 141.88463 | 2 |
| TAGCGAC | 228605 | 0.0 | 141.623 | 2 |
| ATAGACA | 412785 | 0.0 | 140.65195 | 2 |
| AGAGATC | 435845 | 0.0 | 140.5582 | 2 |
| CGAGTAA | 367710 | 0.0 | 139.84196 | 2 |
| TATCAGC | 157635 | 0.0 | 138.74985 | 1 |
| TCGTAGA | 279550 | 0.0 | 138.63597 | 2 |
| GTGCGAA | 132230 | 0.0 | 138.22368 | 2 |
| ATCAGCA | 157700 | 0.0 | 138.18883 | 2 |
| GCCAAGA | 486195 | 0.0 | 138.17879 | 1 |
| AATCCGT | 731420 | 0.0 | 137.5173 | 1 |
| GGCTAAC | 208915 | 0.0 | 137.39073 | 2 |
| TAAGGTC | 222085 | 0.0 | 137.3807 | 2 |
| GAGATCA | 131485 | 0.0 | 137.23439 | 3 |
| ATGAATC | 158380 | 0.0 | 137.18184 | 2 |
| GTCGTAG | 284020 | 0.0 | 136.83475 | 1 |
| GCCACAT | 267610 | 0.0 | 136.77708 | 1 |