Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403969_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 78231292 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 750865 | 0.959801354169122 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 623253 | 0.7966799270041456 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 447628 | 0.572185360303138 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 395219 | 0.5051929859473624 | No Hit |
| AACACCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 84337 | 0.10780468766897011 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATGCCTA | 261610 | 0.0 | 141.09665 | 1 |
| CGCATAC | 332865 | 0.0 | 141.09541 | 1 |
| AACGTGA | 246445 | 0.0 | 140.98466 | 1 |
| ACGTGAT | 246030 | 0.0 | 140.95349 | 2 |
| GCATACA | 334365 | 0.0 | 140.4448 | 2 |
| ACGTATC | 157395 | 0.0 | 140.29091 | 1 |
| GTCACTA | 144970 | 0.0 | 139.99196 | 2 |
| AACATCG | 266510 | 0.0 | 139.45589 | 2 |
| AGTCACT | 145995 | 0.0 | 139.29236 | 1 |
| CGAACTT | 227750 | 0.0 | 138.85571 | 1 |
| TGCCTAA | 265525 | 0.0 | 138.75299 | 2 |
| GATCGCA | 152735 | 0.0 | 138.53638 | 2 |
| ATCCTGT | 255220 | 0.0 | 138.19821 | 1 |
| GAGCTGA | 139990 | 0.0 | 138.08743 | 1 |
| CGACTGG | 194540 | 0.0 | 138.07455 | 1 |
| GAACTTA | 229145 | 0.0 | 137.83827 | 2 |
| CAAGCTA | 122595 | 0.0 | 137.82742 | 2 |
| AGATCGC | 154855 | 0.0 | 137.74838 | 1 |
| TCCTGTA | 256020 | 0.0 | 137.44452 | 2 |
| GACTGGA | 194530 | 0.0 | 137.17488 | 2 |