Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211766_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 57745465 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 285395 | 0.49422928709639796 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 110816 | 0.1919042473724993 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 101720 | 0.17615236105553916 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 99327 | 0.1720083126874119 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 94294 | 0.16329247673388725 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 93588 | 0.1620698699023378 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 73414 | 0.127133793103926 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 69597 | 0.12052375022003892 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 68548 | 0.11870715734993216 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 4176805 | 0.0 | 138.26476 | 1 |
| AGCAGTG | 4256795 | 0.0 | 135.6309 | 2 |
| AGTGGTA | 4177570 | 0.0 | 135.34135 | 5 |
| GTGGTAT | 4182460 | 0.0 | 135.16917 | 6 |
| CAGTGGT | 4199120 | 0.0 | 135.15826 | 4 |
| TGGTATC | 4179290 | 0.0 | 135.04152 | 7 |
| GGTATCA | 4152490 | 0.0 | 134.62708 | 8 |
| GTATCAA | 4162720 | 0.0 | 134.2402 | 9 |
| GCAGTGG | 4345950 | 0.0 | 132.82353 | 3 |
| GTATCGA | 31600 | 0.0 | 125.85967 | 9 |
| GGTATCG | 31790 | 0.0 | 125.65071 | 8 |
| GTGGGAT | 94280 | 0.0 | 95.38288 | 6 |
| CAGTGGG | 101975 | 0.0 | 89.22633 | 4 |
| GGATCAA | 109055 | 0.0 | 79.53712 | 9 |
| AGTGGGA | 133480 | 0.0 | 67.48434 | 5 |
| AGTGGTC | 32765 | 0.0 | 63.646194 | 5 |
| GGGATCA | 156510 | 0.0 | 55.50363 | 8 |
| GTATCCA | 32655 | 0.0 | 54.318962 | 9 |
| GTGGTCT | 39530 | 0.0 | 52.590214 | 6 |
| TGGGATC | 194700 | 0.0 | 45.828957 | 7 |