Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403962_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 97072801 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 11178320 | 11.515398633650223 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 739469 | 0.7617674491539602 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 527501 | 0.5434076224914948 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 524278 | 0.5400874339661837 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 291572 | 0.3003642596034702 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 212135 | 0.21853186249359385 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 187891 | 0.19355679249432597 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 105578 | 0.10876167053220191 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 7904295 | 0.0 | 70.30196 | 1 |
| AGTGGTA | 8239545 | 0.0 | 67.513885 | 5 |
| AGCAGTG | 8267690 | 0.0 | 67.266136 | 2 |
| GTATCAA | 8299290 | 0.0 | 67.04797 | 9 |
| CAGTGGT | 8397865 | 0.0 | 66.23431 | 4 |
| GGTATCA | 8408085 | 0.0 | 66.17066 | 8 |
| GCAGTGG | 8484200 | 0.0 | 65.546524 | 3 |
| GTGGTAT | 8582690 | 0.0 | 64.82047 | 6 |
| TGGTATC | 8587785 | 0.0 | 64.78402 | 7 |
| GAAACCG | 115775 | 0.0 | 23.089277 | 85-89 |
| GATAAGT | 118210 | 0.0 | 22.872242 | 95-99 |
| AAACCGC | 115965 | 0.0 | 22.794409 | 85-89 |
| CGCAGAT | 125100 | 0.0 | 21.77952 | 90-94 |
| ATGGGGG | 452885 | 0.0 | 21.759743 | 25-29 |
| CTACTTA | 126420 | 0.0 | 21.71089 | 135-139 |
| CGACCTA | 28995 | 0.0 | 21.6678 | 45-49 |
| ATGGGGC | 392415 | 0.0 | 21.537624 | 25-29 |
| TACGCAC | 29345 | 0.0 | 21.507607 | 50-54 |
| CGATAGG | 12575 | 0.0 | 21.276117 | 35-39 |
| ATACAAC | 127295 | 0.0 | 21.205023 | 130-134 |