Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211740_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 81632636 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 418614 | 0.5128022571756717 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 400323 | 0.4903957774927175 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 294863 | 0.3612072504923154 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 237901 | 0.29142878590861626 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 204367 | 0.2503496273230721 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 160045 | 0.1960551659755297 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 158568 | 0.19424584059738068 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 129750 | 0.1589437832192507 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACTCTTCTGGTCCCCACAG | 109914 | 0.13464467814073772 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCTAAACCTAGCCCCAAACCC | 103337 | 0.12658785145686094 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT | 85355 | 0.10455989685301845 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 4448180 | 0.0 | 136.67548 | 1 |
| GTGGTAT | 4488870 | 0.0 | 135.44232 | 6 |
| GGTATCA | 4480805 | 0.0 | 135.43637 | 8 |
| TGGTATC | 4488645 | 0.0 | 135.18747 | 7 |
| GTATCAA | 4498065 | 0.0 | 134.95107 | 9 |
| AGCAGTG | 4512830 | 0.0 | 134.83067 | 2 |
| CAGTGGT | 4513900 | 0.0 | 134.74533 | 4 |
| AGTGGTA | 4515640 | 0.0 | 134.71555 | 5 |
| GCAGTGG | 4660110 | 0.0 | 130.52899 | 3 |
| CAACGCA | 4465350 | 0.0 | 27.696497 | 10-14 |
| TCAACGC | 4478310 | 0.0 | 27.587324 | 10-14 |
| CGCAGAG | 4481555 | 0.0 | 27.544773 | 15-19 |
| ATCAACG | 4474825 | 0.0 | 27.543648 | 10-14 |
| AGAGTAC | 4503095 | 0.0 | 27.459074 | 15-19 |
| ACATGGG | 4422565 | 0.0 | 27.452333 | 20-24 |
| AACGCAG | 4510920 | 0.0 | 27.449724 | 10-14 |
| TACATGG | 4488040 | 0.0 | 27.44695 | 20-24 |
| GTACATG | 4492695 | 0.0 | 27.444878 | 20-24 |
| GCAGAGT | 4510070 | 0.0 | 27.421553 | 15-19 |
| CAGAGTA | 4513795 | 0.0 | 27.409986 | 15-19 |