Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211759_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 68209834 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 1045829 | 1.5332525219164146 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 406880 | 0.5965122272545041 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 209772 | 0.30753923253940185 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 78454 | 0.11501860567495296 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTGGTAT | 2410695 | 0.0 | 131.75095 | 6 |
| AAGCAGT | 2426590 | 0.0 | 131.67735 | 1 |
| TGGTATC | 2392590 | 0.0 | 131.50952 | 7 |
| AGTGGTA | 2418550 | 0.0 | 131.3421 | 5 |
| GGTATCA | 2398040 | 0.0 | 131.337 | 8 |
| CAGTGGT | 2422840 | 0.0 | 131.03288 | 4 |
| AGCAGTG | 2429755 | 0.0 | 130.72192 | 2 |
| GTATCAA | 2426245 | 0.0 | 130.64572 | 9 |
| GCAGTGG | 2489485 | 0.0 | 127.57483 | 3 |
| GGTATAA | 41795 | 0.0 | 73.38865 | 8 |
| TGGTATA | 44420 | 0.0 | 69.035545 | 7 |
| GCAGTTG | 43320 | 0.0 | 46.57892 | 3 |
| GTATAAA | 68850 | 0.0 | 44.905643 | 9 |
| GTTGTAT | 45770 | 0.0 | 44.32092 | 6 |
| TTGTATC | 46125 | 0.0 | 43.854244 | 7 |
| TGTATCA | 48735 | 0.0 | 41.6238 | 8 |
| CAGTTGT | 54195 | 0.0 | 37.484047 | 4 |
| AGCAGTT | 58745 | 0.0 | 34.703804 | 2 |
| AGTTGTA | 69680 | 0.0 | 29.226276 | 5 |
| CATGGGG | 921940 | 0.0 | 26.748957 | 25-29 |