Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211762_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 81812546 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 2109295 | 2.5782048146992027 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1548345 | 1.8925520298561544 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1092815 | 1.3357547875358873 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGATA | 429216 | 0.5246334712526853 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 269159 | 0.328994773002175 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGAT | 235128 | 0.2873984633114828 | No Hit |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 197721 | 0.24167564715563308 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 99720 | 0.1218883959435757 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 93187 | 0.11390306811867217 | No Hit |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 92723 | 0.11333591794099648 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 91400 | 0.11171880655077035 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGCTTA | 410660 | 0.0 | 141.4804 | 2 |
| ATGCCTA | 254675 | 0.0 | 140.834 | 1 |
| TGCCTAA | 253620 | 0.0 | 139.62329 | 2 |
| ACCTTAC | 307940 | 0.0 | 138.80339 | 2 |
| AGTTAGC | 120245 | 0.0 | 137.13681 | 2 |
| CACCTTA | 308855 | 0.0 | 136.8874 | 1 |
| GCCTAAT | 116375 | 0.0 | 136.2361 | 3 |
| AGAGTCA | 114570 | 0.0 | 136.18481 | 1 |
| AGTGGTC | 252350 | 0.0 | 135.66777 | 1 |
| CAAGCTA | 110425 | 0.0 | 135.21945 | 2 |
| GTGGTCA | 251265 | 0.0 | 135.02489 | 2 |
| GAGTCAA | 113905 | 0.0 | 134.95123 | 2 |
| CAATGGA | 331170 | 0.0 | 134.94836 | 1 |
| ATCGGTG | 357900 | 0.0 | 134.70064 | 3 |
| AACGCTT | 437835 | 0.0 | 134.42867 | 1 |
| CATCGGT | 354785 | 0.0 | 134.37634 | 2 |
| CGCTTAA | 130865 | 0.0 | 134.34119 | 3 |
| ATGAATC | 133135 | 0.0 | 134.26662 | 2 |
| CCTAATC | 125220 | 0.0 | 133.6429 | 1 |
| ACGTATC | 102010 | 0.0 | 133.00224 | 1 |