Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211739_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 110015853 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 701277 | 0.6374326798156988 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 329369 | 0.29938321707145243 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 304413 | 0.27669921352152765 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 277483 | 0.25222092310641814 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 200067 | 0.18185288260229188 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 198056 | 0.18002496422038378 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCTAAACCTAGCCCCAAACCC | 163616 | 0.14872038487035136 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 146325 | 0.13300355904162287 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT | 110170 | 0.10014011344346892 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 5344735 | 0.0 | 133.3447 | 1 |
| GTGGTAT | 5376650 | 0.0 | 132.60884 | 6 |
| GGTATCA | 5378890 | 0.0 | 132.56433 | 8 |
| TGGTATC | 5393415 | 0.0 | 132.21198 | 7 |
| GTATCAA | 5406040 | 0.0 | 131.94356 | 9 |
| AGCAGTG | 5413790 | 0.0 | 131.65952 | 2 |
| CAGTGGT | 5418580 | 0.0 | 131.57881 | 4 |
| AGTGGTA | 5429230 | 0.0 | 131.31516 | 5 |
| GCAGTGG | 5516875 | 0.0 | 129.21414 | 3 |
| CAACGCA | 5353570 | 0.0 | 27.116453 | 10-14 |
| CATGGGG | 1953645 | 0.0 | 27.010073 | 25-29 |
| ACATGGG | 5270210 | 0.0 | 26.966215 | 20-24 |
| ATCAACG | 5373545 | 0.0 | 26.945621 | 10-14 |
| CGCAGAG | 5365785 | 0.0 | 26.93876 | 15-19 |
| TCAACGC | 5388360 | 0.0 | 26.938065 | 10-14 |
| TACATGG | 5377675 | 0.0 | 26.883228 | 20-24 |
| AGAGTAC | 5393105 | 0.0 | 26.842297 | 15-19 |
| GTACATG | 5392885 | 0.0 | 26.82817 | 20-24 |
| GCAGAGT | 5400195 | 0.0 | 26.816145 | 15-19 |
| CAGAGTA | 5405455 | 0.0 | 26.798756 | 15-19 |