Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211801_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 54861871 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 699948 | 1.2758369104837857 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 490149 | 0.8934237769615987 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 114823 | 0.20929472128283777 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 94256 | 0.1718060253541116 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 74474 | 0.13574819568220703 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 68633 | 0.12510145707571657 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 2388615 | 0.0 | 128.09433 | 1 |
| GGTATCA | 2418915 | 0.0 | 124.914375 | 8 |
| AGCAGTG | 2443350 | 0.0 | 124.6995 | 2 |
| GTGGTAT | 2426870 | 0.0 | 124.560905 | 6 |
| AGTGGTA | 2429500 | 0.0 | 124.5329 | 5 |
| TGGTATC | 2422040 | 0.0 | 124.52792 | 7 |
| CAGTGGT | 2432755 | 0.0 | 124.40085 | 4 |
| GTATCAA | 2437470 | 0.0 | 124.27787 | 9 |
| GCAGTGG | 2467195 | 0.0 | 122.846886 | 3 |
| GTCGTAG | 5520 | 0.0 | 48.339848 | 1 |
| CGGATTG | 12130 | 0.0 | 41.425613 | 1 |
| CGAGTAA | 6250 | 0.0 | 40.486652 | 2 |
| CCTTACG | 8195 | 0.0 | 32.381622 | 3 |
| TGACTGG | 32610 | 0.0 | 31.305332 | 2 |
| GTGATAT | 38995 | 0.0 | 31.141666 | 6 |
| GTGACTG | 34075 | 0.0 | 30.216837 | 1 |
| AGTGATA | 42000 | 0.0 | 29.310577 | 5 |
| GTTAGCG | 4280 | 0.0 | 28.968018 | 3 |
| GACTGGA | 37870 | 0.0 | 26.918846 | 3 |
| CATGGGG | 895540 | 0.0 | 26.22154 | 25-29 |