Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211736_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 86719651 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 405614 | 0.4677302033883877 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 228093 | 0.2630234293724268 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 212086 | 0.2445650986302978 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 163121 | 0.18810154113742916 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGAGTCA | 318180 | 0.0 | 138.95343 | 1 |
| CTCAATG | 389620 | 0.0 | 138.59798 | 1 |
| GAGTCAA | 319335 | 0.0 | 138.1482 | 2 |
| ACGTATC | 179940 | 0.0 | 138.07541 | 1 |
| ATGCCTA | 288760 | 0.0 | 138.06827 | 1 |
| AGATCGC | 384905 | 0.0 | 137.99863 | 1 |
| GATCGCA | 384960 | 0.0 | 137.64597 | 2 |
| GAGCTGA | 285790 | 0.0 | 137.3487 | 1 |
| ACTTCGA | 157360 | 0.0 | 137.22649 | 2 |
| ACGTGAT | 157810 | 0.0 | 137.19801 | 2 |
| TGCCTAA | 292470 | 0.0 | 136.11237 | 2 |
| AGCTGAA | 287310 | 0.0 | 135.80406 | 2 |
| GACTAGT | 163615 | 0.0 | 135.61807 | 1 |
| GTCACTA | 148845 | 0.0 | 135.2957 | 2 |
| AACGTGA | 158505 | 0.0 | 135.08946 | 1 |
| CTAAGTG | 341885 | 0.0 | 134.04758 | 3 |
| ACTAGTA | 164950 | 0.0 | 133.59383 | 2 |
| TAAGTGC | 130675 | 0.0 | 133.56447 | 4 |
| CTAAGTC | 179390 | 0.0 | 132.98509 | 3 |
| TCAATGA | 403450 | 0.0 | 132.80489 | 2 |