Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403964_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 162178149 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 36 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 2012737 | 1.241065465607207 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1097818 | 0.6769210320682597 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1035390 | 0.6384275602997541 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 185556 | 0.11441492034787004 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGTCACT | 1417280 | 0.0 | 143.1564 | 1 |
| GTCACTA | 1416090 | 0.0 | 142.79202 | 2 |
| GATAGAC | 287885 | 0.0 | 140.4515 | 1 |
| GCTAACG | 247085 | 0.0 | 140.43549 | 1 |
| CTAACGA | 237820 | 0.0 | 139.90681 | 2 |
| ACTTCGA | 253185 | 0.0 | 139.24556 | 2 |
| TCACTAT | 850365 | 0.0 | 138.70575 | 3 |
| ACGTATC | 188930 | 0.0 | 138.07823 | 1 |
| TCACTAG | 176720 | 0.0 | 137.98991 | 3 |
| ATAGACA | 292870 | 0.0 | 137.28459 | 2 |
| TATCAGC | 177555 | 0.0 | 137.07297 | 1 |
| AGTTAGC | 152755 | 0.0 | 137.05362 | 2 |
| CAATGGA | 541515 | 0.0 | 136.7458 | 1 |
| TCACTAA | 458330 | 0.0 | 136.25725 | 3 |
| TAACGAT | 131845 | 0.0 | 136.25436 | 3 |
| ATGAATC | 207190 | 0.0 | 136.23564 | 2 |
| AGAGTCA | 134700 | 0.0 | 136.0898 | 1 |
| ATCAGCA | 177875 | 0.0 | 135.95079 | 2 |
| ATGCCTA | 164630 | 0.0 | 135.67392 | 1 |
| CCGTCTA | 507265 | 0.0 | 135.2781 | 2 |