Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211734_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 62599902 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 2583167 | 4.126471316201101 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 451493 | 0.7212359533725787 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 396876 | 0.6339882129527934 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 189141 | 0.30214264552682524 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 127179 | 0.20316165990164012 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 118199 | 0.1888165895211785 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCAC | 89235 | 0.14254814648112388 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACAACCTTAGCCAAACCAT | 84172 | 0.13446027439467878 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 82681 | 0.13207848152861326 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGATAGGTTTGGTCCTAGCCTT | 81193 | 0.1297014810023185 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGTTCGTTTGTTCAACGAT | 77013 | 0.12302415425506576 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 69328 | 0.11074777720898031 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 66894 | 0.10685959220830729 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCGACTCTTAGCGGTGGATCA | 64597 | 0.1031902573904988 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 3216970 | 0.0 | 90.40218 | 1 |
| GTATCAA | 3254895 | 0.0 | 89.01613 | 9 |
| AGTGGTA | 3280765 | 0.0 | 88.88191 | 5 |
| AGCAGTG | 3285560 | 0.0 | 88.39109 | 2 |
| GGTATCA | 3287450 | 0.0 | 88.33896 | 8 |
| CAGTGGT | 3328780 | 0.0 | 87.55836 | 4 |
| GTGGTAT | 3319905 | 0.0 | 87.51654 | 6 |
| TGGTATC | 3314660 | 0.0 | 87.33377 | 7 |
| GCAGTGG | 3378990 | 0.0 | 86.240585 | 3 |
| GGTATAA | 34930 | 0.0 | 34.835136 | 8 |
| TGGTATA | 37540 | 0.0 | 32.489418 | 7 |
| AGCGGTA | 11045 | 0.0 | 26.596054 | 5 |
| CGGTATC | 11815 | 0.0 | 25.045567 | 7 |
| CATGGGG | 733730 | 0.0 | 24.941307 | 25-29 |
| GCGGTAT | 12040 | 0.0 | 24.398125 | 6 |
| ATGGGGG | 296925 | 0.0 | 23.917458 | 25-29 |
| CGTCGAT | 11865 | 0.0 | 22.4278 | 60-64 |
| ATGGGGC | 190695 | 0.0 | 22.161621 | 25-29 |
| ATGGGAG | 353225 | 0.0 | 21.218605 | 25-29 |
| ATGGGGT | 128915 | 0.0 | 21.185694 | 25-29 |