Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211761_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 83968590 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 660862 | 0.7870347709780525 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 313800 | 0.37371116985529945 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 113908 | 0.1356554873673596 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 112612 | 0.13411205309032817 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 4119460 | 0.0 | 140.94412 | 1 |
| TGGTATC | 4134610 | 0.0 | 139.95186 | 7 |
| AGTGGTA | 4146030 | 0.0 | 139.94319 | 5 |
| AGCAGTG | 4147065 | 0.0 | 139.79103 | 2 |
| GTGGTAT | 4150800 | 0.0 | 139.73572 | 6 |
| CAGTGGT | 4153910 | 0.0 | 139.60631 | 4 |
| GGTATCA | 4157355 | 0.0 | 139.27466 | 8 |
| GTATCAA | 4186830 | 0.0 | 138.60577 | 9 |
| GCAGTGG | 4282305 | 0.0 | 135.32372 | 3 |
| TGGTATA | 40810 | 0.0 | 43.22322 | 7 |
| TAGCGAC | 3405 | 0.0 | 43.169765 | 2 |
| GGTATAA | 43225 | 0.0 | 40.691723 | 8 |
| GTTGTAT | 35455 | 0.0 | 38.054825 | 6 |
| GCAGTTG | 38025 | 0.0 | 35.245975 | 3 |
| TTGTATC | 38630 | 0.0 | 35.020283 | 7 |
| CAGTTGT | 41650 | 0.0 | 32.602005 | 4 |
| CAACGCA | 4154065 | 0.0 | 28.275972 | 10-14 |
| ATCAACG | 4155350 | 0.0 | 28.207937 | 10-14 |
| TCAACGC | 4161095 | 0.0 | 28.191452 | 10-14 |
| CGCAGAG | 4153080 | 0.0 | 28.181438 | 15-19 |