Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211809_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 99142061 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 420442 | 0.4240803507201651 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 413774 | 0.41735464829604463 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGAT | 340018 | 0.34296039094849967 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCGCGTTGATAC | 307242 | 0.3099007594768481 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGGACTCTGCGTTGAT | 128366 | 0.12947683223974937 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 105609 | 0.10652290151603769 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGTATC | 216855 | 0.0 | 141.199 | 1 |
| ATGCCTA | 210510 | 0.0 | 141.03323 | 1 |
| ACGTGAT | 166110 | 0.0 | 140.50378 | 2 |
| CGAAGTA | 282715 | 0.0 | 140.4144 | 2 |
| CCGAAGT | 285510 | 0.0 | 140.06683 | 1 |
| CTCAATG | 290770 | 0.0 | 140.0096 | 1 |
| AGAGTCA | 185290 | 0.0 | 139.80452 | 1 |
| ACTTCGA | 117625 | 0.0 | 139.33998 | 2 |
| AACGTGA | 167215 | 0.0 | 138.75221 | 1 |
| AGTCACT | 145415 | 0.0 | 138.44 | 1 |
| CAATGGA | 536905 | 0.0 | 138.3364 | 1 |
| GAGTCAA | 185290 | 0.0 | 138.21637 | 2 |
| GTCACTA | 144195 | 0.0 | 138.19078 | 2 |
| ACGCTTA | 127760 | 0.0 | 138.10164 | 2 |
| TGCCTAA | 213315 | 0.0 | 137.97385 | 2 |
| ACTGTGT | 577010 | 0.0 | 137.37672 | 2 |
| AACATCG | 158510 | 0.0 | 136.45744 | 2 |
| CTGGCAT | 148840 | 0.0 | 136.3984 | 1 |
| GATCGCA | 210950 | 0.0 | 136.31114 | 2 |
| TGAGCCA | 224850 | 0.0 | 136.21326 | 2 |