Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211781_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 119722735 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 31 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 2957170 | 2.4700154068481646 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1219320 | 1.0184531785044837 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 341280 | 0.285058639864851 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATAC | 200143 | 0.16717209141605394 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 142601 | 0.1191093738378095 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 125521 | 0.10484307763266518 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGAGTCA | 355995 | 0.0 | 140.70312 | 1 |
| ACACAGA | 808820 | 0.0 | 140.36707 | 1 |
| GTGTGAC | 626420 | 0.0 | 140.0312 | 5 |
| GAGTCAA | 356725 | 0.0 | 139.86629 | 2 |
| ATGCCTA | 287900 | 0.0 | 139.80191 | 1 |
| CACAGAA | 816175 | 0.0 | 139.39496 | 2 |
| CAAGCTA | 252415 | 0.0 | 139.34453 | 2 |
| CAATGGA | 651290 | 0.0 | 139.08307 | 1 |
| TGCCTAA | 290950 | 0.0 | 138.92851 | 2 |
| ACCGAGA | 182100 | 0.0 | 138.5101 | 2 |
| GTGACTG | 323085 | 0.0 | 137.96637 | 7 |
| AACGTGA | 184305 | 0.0 | 137.9605 | 1 |
| TGACTGG | 326735 | 0.0 | 137.64377 | 8 |
| CGAAGTA | 182785 | 0.0 | 137.61284 | 2 |
| ACGTGAT | 185615 | 0.0 | 137.5281 | 2 |
| CCGAAGT | 182715 | 0.0 | 137.4467 | 1 |
| ACAAGCT | 254370 | 0.0 | 137.08646 | 1 |
| GACGGAT | 154230 | 0.0 | 137.01587 | 3 |
| TGTGACT | 401345 | 0.0 | 136.85 | 6 |
| AACCGAG | 182915 | 0.0 | 136.81613 | 1 |