Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211750_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 58411209 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 137965 | 0.23619610407310693 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 113924 | 0.19503790787826358 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTAATCCCAGCACTTTGGGA | 97211 | 0.16642524896206137 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTATCAACGCAGAGTACATG | 71267 | 0.12200911643516915 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTATCAACGCAGAGTACATGG | 71207 | 0.12190639642469991 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 3853875 | 0.0 | 142.03685 | 1 |
| AGCAGTG | 3925780 | 0.0 | 139.12463 | 2 |
| AGTGGTA | 3928740 | 0.0 | 138.92696 | 5 |
| TGGTATC | 3926510 | 0.0 | 138.75604 | 7 |
| CAGTGGT | 3941060 | 0.0 | 138.46964 | 4 |
| GTGGTAT | 3941635 | 0.0 | 138.45074 | 6 |
| GGTATCA | 3950875 | 0.0 | 137.96124 | 8 |
| GTATCAA | 3969395 | 0.0 | 137.59116 | 9 |
| GCAGTGG | 4051680 | 0.0 | 134.69737 | 3 |
| GTTGTAT | 29635 | 0.0 | 37.184155 | 6 |
| GCAGTTG | 31475 | 0.0 | 35.317905 | 3 |
| TGGTATA | 33295 | 0.0 | 34.860332 | 7 |
| CAGTTGT | 33755 | 0.0 | 32.73664 | 4 |
| TTGTATC | 34000 | 0.0 | 32.580944 | 7 |
| GGTATAA | 36680 | 0.0 | 31.504908 | 8 |
| AGTTGTA | 37040 | 0.0 | 29.906912 | 5 |
| CAACGCA | 3946495 | 0.0 | 28.422884 | 10-14 |
| AACGCAG | 3954850 | 0.0 | 28.354002 | 10-14 |
| TCAACGC | 3952305 | 0.0 | 28.353552 | 10-14 |
| ATCAACG | 3946060 | 0.0 | 28.29892 | 10-14 |