Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211743_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 184202754 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 3027070 | 1.6433359079962506 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 2015635 | 1.0942480262808667 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 810344 | 0.4399195899101487 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 475068 | 0.2579049388154099 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 401895 | 0.21818077703659086 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 396217 | 0.21509830412198944 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 308758 | 0.1676185579722657 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 289229 | 0.15701665350779717 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 261216 | 0.14180895471302238 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 221114 | 0.12003837901359499 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 196982 | 0.1069375976865145 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 10544670 | 0.0 | 121.561455 | 1 |
| AGTGGTA | 10647090 | 0.0 | 119.607285 | 5 |
| GTATCAA | 10651985 | 0.0 | 119.4112 | 9 |
| AGCAGTG | 10650975 | 0.0 | 119.4053 | 2 |
| GGTATCA | 10566050 | 0.0 | 119.39946 | 8 |
| GTGGTAT | 10684745 | 0.0 | 119.174995 | 6 |
| CAGTGGT | 10693260 | 0.0 | 118.953926 | 4 |
| TGGTATC | 10613890 | 0.0 | 118.83776 | 7 |
| GCAGTGG | 10863035 | 0.0 | 116.99519 | 3 |
| GGTATAA | 165180 | 0.0 | 78.94555 | 8 |
| TGGTATA | 171735 | 0.0 | 75.91964 | 7 |
| GCAGTTG | 186870 | 0.0 | 55.26095 | 3 |
| GTTGTAT | 190025 | 0.0 | 54.514015 | 6 |
| TGTATCA | 189685 | 0.0 | 54.463726 | 8 |
| GTATAAA | 241570 | 0.0 | 54.154015 | 9 |
| TTGTATC | 196680 | 0.0 | 52.566944 | 7 |
| CAGTTGT | 212805 | 0.0 | 48.67747 | 4 |
| AGCAGTT | 219015 | 0.0 | 47.28509 | 2 |
| AGTTGTA | 239395 | 0.0 | 43.31599 | 5 |
| CATGGGG | 3538225 | 0.0 | 26.872438 | 25-29 |