Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211786_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 83397269 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 2128392 | 2.5521123479475087 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1049995 | 1.2590280384361268 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 226540 | 0.27163959050025965 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 133160 | 0.1596694970910858 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTAG | 97477 | 0.11688272430119984 | Illumina Single End PCR Primer 1 (100% over 22bp) |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 93969 | 0.11267635154815442 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CAATGGA | 605890 | 0.0 | 140.63837 | 1 |
| AGTCACT | 190635 | 0.0 | 138.8031 | 1 |
| GTCACTA | 190820 | 0.0 | 138.2653 | 2 |
| ATGCCTA | 107465 | 0.0 | 138.12997 | 1 |
| AAGACTA | 161675 | 0.0 | 137.55937 | 2 |
| GAGTCAA | 127465 | 0.0 | 137.53835 | 2 |
| AACATCG | 165550 | 0.0 | 137.34604 | 2 |
| CAAGACT | 162590 | 0.0 | 137.22194 | 1 |
| CTCAATG | 176885 | 0.0 | 137.20421 | 1 |
| AGAGTCA | 129030 | 0.0 | 137.1241 | 1 |
| TGCCTAA | 108150 | 0.0 | 137.08633 | 2 |
| CAAGCTA | 133545 | 0.0 | 136.98305 | 2 |
| GAACTTA | 104035 | 0.0 | 136.97668 | 2 |
| ACGCTTA | 125060 | 0.0 | 136.87154 | 2 |
| CGAACTT | 104645 | 0.0 | 136.85658 | 1 |
| AATGGAA | 622135 | 0.0 | 136.82571 | 2 |
| ACAAGCT | 135020 | 0.0 | 135.70839 | 1 |
| ACGTGAT | 130840 | 0.0 | 135.54301 | 2 |
| ACGTATC | 106900 | 0.0 | 135.15685 | 1 |
| AACGTGA | 131140 | 0.0 | 134.88484 | 1 |