Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211778_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 123902168 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 2544075 | 2.053293369329906 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1071629 | 0.8648993131419621 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 263524 | 0.21268715814561048 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTCCGTTGATAC | 228662 | 0.1845504430560085 | No Hit |
| CATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT | 201434 | 0.16257504065627004 | No Hit |
| CTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTT | 185229 | 0.14949617346485816 | No Hit |
| ATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACC | 180827 | 0.14594337041786065 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 158897 | 0.12824392225324097 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 132053 | 0.10657844179126873 | No Hit |
| CTGAGCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 126365 | 0.1019877230881061 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGAGTCA | 356210 | 0.0 | 141.87656 | 1 |
| AGTCACT | 330580 | 0.0 | 141.47668 | 1 |
| GAGTCAA | 355585 | 0.0 | 141.05347 | 2 |
| CAATGGA | 941355 | 0.0 | 140.92676 | 1 |
| CAAGCTA | 286490 | 0.0 | 140.67632 | 2 |
| GTCACTA | 334205 | 0.0 | 140.245 | 2 |
| ATGCCTA | 188170 | 0.0 | 140.11633 | 1 |
| ACGTGAT | 192830 | 0.0 | 139.46347 | 2 |
| CTCAATG | 355480 | 0.0 | 139.18106 | 1 |
| ACAAGCT | 290340 | 0.0 | 139.09587 | 1 |
| AGTCAAT | 202005 | 0.0 | 138.9384 | 3 |
| AAGGTAC | 221115 | 0.0 | 138.77678 | 1 |
| AGCTGAA | 190615 | 0.0 | 138.3465 | 2 |
| TGCCTAA | 190495 | 0.0 | 138.27475 | 2 |
| ACTTCGA | 201050 | 0.0 | 138.10641 | 2 |
| GAGCTGA | 190445 | 0.0 | 137.93466 | 1 |
| AACGTGA | 196470 | 0.0 | 137.3859 | 1 |
| GACGGAT | 125145 | 0.0 | 137.31711 | 3 |
| AGGTACA | 223760 | 0.0 | 137.061 | 2 |
| CTGGCAT | 146465 | 0.0 | 136.65125 | 1 |