Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211747_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 93277962 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1735571 | 1.8606442109016061 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1219591 | 1.3074803242377873 | No Hit |
| CTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTT | 301383 | 0.32310204204504384 | No Hit |
| CTGAGCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 277187 | 0.29716236724811806 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 203039 | 0.2176709220984052 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC | 97318 | 0.1043311816782618 | No Hit |
| CTGACCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 94237 | 0.10102815067936412 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGAACTT | 241880 | 0.0 | 140.0687 | 1 |
| ACGTATC | 234680 | 0.0 | 139.74055 | 1 |
| AGTCACT | 248990 | 0.0 | 139.55728 | 1 |
| GTCACTA | 249270 | 0.0 | 139.36589 | 2 |
| GAACTTA | 241865 | 0.0 | 139.33311 | 2 |
| AACATCG | 307185 | 0.0 | 139.23334 | 2 |
| CTCAATG | 293355 | 0.0 | 138.76642 | 1 |
| AAGACTA | 236505 | 0.0 | 138.67845 | 2 |
| ACGCTTA | 177925 | 0.0 | 138.50568 | 2 |
| CAAGACT | 237935 | 0.0 | 138.29843 | 1 |
| AGAGTCA | 162050 | 0.0 | 138.2192 | 1 |
| GAGTCAA | 161235 | 0.0 | 138.17455 | 2 |
| CCGAAGT | 183430 | 0.0 | 137.98395 | 1 |
| ACTTCGA | 142265 | 0.0 | 137.82341 | 2 |
| CGAAGTA | 184030 | 0.0 | 137.27637 | 2 |
| CAATGGA | 300585 | 0.0 | 136.52211 | 1 |
| AGACTAT | 116860 | 0.0 | 136.16255 | 3 |
| TGAGCCA | 215145 | 0.0 | 135.97423 | 2 |
| TCAATGA | 297785 | 0.0 | 135.80722 | 2 |
| AACGTGA | 145785 | 0.0 | 135.28732 | 1 |