Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211798_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 35466500 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 151 |
| %GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 1094436 | 3.0858302905558768 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 125974 | 0.355191518757137 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 119962 | 0.33824031127965826 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 97288 | 0.27430955972537463 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCTAAACCTAGCCCCAAACC | 35845 | 0.10106720426317792 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 2193650 | 0.0 | 110.59885 | 1 |
| AGTGGTA | 2219060 | 0.0 | 108.36453 | 5 |
| AGCAGTG | 2228985 | 0.0 | 108.35231 | 2 |
| TGGTATC | 2214715 | 0.0 | 108.27031 | 7 |
| GTGGTAT | 2221390 | 0.0 | 108.19039 | 6 |
| CAGTGGT | 2223170 | 0.0 | 108.163605 | 4 |
| GGTATCA | 2221025 | 0.0 | 108.11383 | 8 |
| GTATCAA | 2239690 | 0.0 | 107.66019 | 9 |
| GCAGTGG | 2275250 | 0.0 | 105.87835 | 3 |
| CGCTGTT | 7385 | 0.0 | 41.524803 | 145 |
| TGCGGCT | 7650 | 0.0 | 37.14859 | 145 |
| GCAGTTG | 21820 | 0.0 | 35.52452 | 3 |
| GTTGTAT | 24135 | 0.0 | 31.780386 | 6 |
| CAGTTGT | 24265 | 0.0 | 31.676037 | 4 |
| CCGCAAG | 17275 | 0.0 | 30.59336 | 145 |
| TTGTATC | 25780 | 0.0 | 29.555655 | 7 |
| TGGTATA | 24415 | 0.0 | 29.277971 | 7 |
| GGTATAA | 25850 | 0.0 | 27.961174 | 8 |
| ATGGGGT | 223480 | 0.0 | 25.90268 | 25-29 |
| ACGTATC | 3535 | 0.0 | 25.64144 | 1 |