Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211764_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 79665234 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 2407313 | 3.0217861407398865 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 832266 | 1.0447041428385186 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 646318 | 0.8112924139531179 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 541535 | 0.6797632703871804 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGATA | 377877 | 0.47433112416389817 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 367332 | 0.4610944844522769 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGAT | 141985 | 0.17822705447648593 | No Hit |
| GTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC | 130779 | 0.1641606927307839 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATAC | 99208 | 0.12453110976866019 | No Hit |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 96893 | 0.12162519977032893 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTAGATCGGAAGAGCGTCGTGTA | 90008 | 0.1129827849372789 | Illumina Single End PCR Primer 1 (100% over 21bp) |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TATCAGC | 226445 | 0.0 | 140.1672 | 1 |
| GTCGTAG | 249675 | 0.0 | 139.5691 | 1 |
| ATAGCGA | 149580 | 0.0 | 139.55373 | 1 |
| AGTTAGC | 172685 | 0.0 | 139.46104 | 2 |
| TCGTAGA | 247825 | 0.0 | 138.9435 | 2 |
| TAGCGAC | 151610 | 0.0 | 138.27467 | 2 |
| TGGTCAG | 379685 | 0.0 | 137.78912 | 1 |
| GATAGAC | 140150 | 0.0 | 137.59271 | 1 |
| ATCAGCA | 227620 | 0.0 | 137.4794 | 2 |
| GGCTAAC | 152985 | 0.0 | 137.31433 | 2 |
| GGTCAGT | 350920 | 0.0 | 136.32985 | 2 |
| TAGGATG | 217165 | 0.0 | 135.97293 | 1 |
| CAGTGAC | 283135 | 0.0 | 135.91042 | 5 |
| TCTGTCA | 221140 | 0.0 | 135.82846 | 2 |
| AGGCTAA | 153095 | 0.0 | 135.75221 | 1 |
| TCAGTGA | 244420 | 0.0 | 135.72887 | 4 |
| GTCAGTG | 341175 | 0.0 | 135.67233 | 3 |
| TCACGCA | 134065 | 0.0 | 135.64651 | 2 |
| ATAGACA | 142915 | 0.0 | 135.32928 | 2 |
| AGGATGA | 214095 | 0.0 | 135.25243 | 2 |