Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR7403965_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 206099572 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 33 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 3658176 | 1.7749556510481255 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1653278 | 0.8021743975285888 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1090087 | 0.5289127917257392 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 767309 | 0.37230014237972314 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 370283 | 0.17966218775068585 | No Hit |
| GCTAACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 225060 | 0.10919964452910169 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCTAACG | 4132965 | 0.0 | 143.02826 | 1 |
| CTAACGA | 4135230 | 0.0 | 142.94673 | 2 |
| GATAGAC | 1143395 | 0.0 | 142.77817 | 1 |
| TAACGAT | 2230860 | 0.0 | 142.34157 | 3 |
| ATAGACA | 1161205 | 0.0 | 141.08926 | 2 |
| TAACGAA | 1418460 | 0.0 | 140.75882 | 3 |
| TAACGAG | 552400 | 0.0 | 140.36424 | 3 |
| AACGATT | 1362130 | 0.0 | 139.85936 | 4 |
| TAGACAT | 576075 | 0.0 | 139.85013 | 3 |
| AGTTAGC | 293865 | 0.0 | 139.78192 | 2 |
| TAGCGAC | 237000 | 0.0 | 138.69244 | 2 |
| CAGATTC | 513575 | 0.0 | 138.61682 | 2 |
| AACGATA | 674635 | 0.0 | 138.51521 | 4 |
| ATAGCGA | 238665 | 0.0 | 138.39563 | 1 |
| AGCACCT | 529775 | 0.0 | 138.19391 | 1 |
| AACGAAT | 854835 | 0.0 | 137.43346 | 4 |
| CGTGAGA | 292810 | 0.0 | 137.06915 | 2 |
| ACGATTA | 394255 | 0.0 | 136.39017 | 5 |
| ACGATAT | 409240 | 0.0 | 136.17097 | 5 |
| AACGATG | 268460 | 0.0 | 136.12822 | 4 |