Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6211746_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 121008875 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 37 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1795350 | 1.483651509031879 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 828105 | 0.6843341035936413 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 535142 | 0.4422336791413027 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 531674 | 0.43936777364470164 | No Hit |
| CCATCCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG | 182451 | 0.15077489151105652 | No Hit |
| CCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGA | 123720 | 0.10224043484413849 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAAGGTC | 876480 | 0.0 | 142.08124 | 2 |
| GATGTAC | 1296325 | 0.0 | 142.07852 | 2 |
| AGATGTA | 1304310 | 0.0 | 141.57501 | 1 |
| CTAAGGT | 879425 | 0.0 | 141.03607 | 1 |
| ATGAATC | 344330 | 0.0 | 140.44193 | 2 |
| GATAGAC | 214055 | 0.0 | 139.52118 | 1 |
| TATCAGC | 291330 | 0.0 | 139.23196 | 1 |
| TGGAACA | 459540 | 0.0 | 138.8235 | 1 |
| AAGGTCA | 283245 | 0.0 | 137.92943 | 3 |
| AGAGATC | 315805 | 0.0 | 137.84833 | 2 |
| ATCAGCA | 293775 | 0.0 | 137.30838 | 2 |
| AGCACCT | 346405 | 0.0 | 137.02094 | 1 |
| AAGGTCG | 237080 | 0.0 | 136.94179 | 3 |
| ATAGCGA | 97355 | 0.0 | 136.69502 | 1 |
| CCTAATC | 303025 | 0.0 | 136.66524 | 1 |
| AGTTAGC | 140455 | 0.0 | 136.19017 | 2 |
| GTGCGAA | 196300 | 0.0 | 136.0483 | 2 |
| GGAACAA | 466475 | 0.0 | 135.95766 | 2 |
| CTAATCC | 305650 | 0.0 | 135.76959 | 2 |
| AAGGTCT | 390475 | 0.0 | 135.53612 | 3 |