Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6155074_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 134912655 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 13066244 | 9.684965431893694 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTCGGGGACGGGTGGCGTGTG | 3295811 | 2.4429220520491572 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 582845 | 0.43201655174601666 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 575518 | 0.4265856305325842 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAACCCATCGGCTGGCACCAC | 520372 | 0.385710295301801 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAGTTGAGTGCTGAAAAA | 382484 | 0.2835049091577065 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTATCAACGCAGAGTACATGG | 351551 | 0.2605767412997691 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGTAAGTTAGAAAAAAAA | 333796 | 0.2474163746907212 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 328442 | 0.24344788114947408 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTATCAACGCAGAGTACATG | 302495 | 0.22421543775860017 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 254816 | 0.1888747945846889 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTGGTATCAACGCAGAGTACA | 219624 | 0.1627897694252626 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACATGTCGCATATAGGACT | 192987 | 0.14304588402029447 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCCGTAAGTTAGAAAAAAAAA | 183415 | 0.13595092321028002 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTGGTATCAACGCAGAGTAC | 160850 | 0.11922528690877814 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCGGCGTCGCCAGGAGGAGC | 160282 | 0.11880427377253823 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 155649 | 0.11537020007500408 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 11820345 | 0.0 | 76.18002 | 1 |
| AGCAGTG | 12074205 | 0.0 | 74.61061 | 2 |
| AGTGGTA | 12072705 | 0.0 | 74.603134 | 5 |
| GTATCAA | 12166155 | 0.0 | 74.00118 | 9 |
| CAGTGGT | 12201070 | 0.0 | 73.88209 | 4 |
| GCAGTGG | 12238385 | 0.0 | 73.64318 | 3 |
| GGTATCA | 12290185 | 0.0 | 73.280975 | 8 |
| GTGGTAT | 12297675 | 0.0 | 73.225136 | 6 |
| TGGTATC | 12311065 | 0.0 | 73.169525 | 7 |
| TGACTGG | 86375 | 0.0 | 22.768518 | 2 |
| ATGGGGC | 393425 | 0.0 | 22.326298 | 25-29 |
| GACTGGA | 87860 | 0.0 | 22.260746 | 3 |
| CATGGGG | 1822370 | 0.0 | 22.2248 | 25-29 |
| CGCATAT | 35890 | 0.0 | 21.351494 | 35-39 |
| ATGGGAC | 390750 | 0.0 | 20.9071 | 25-29 |
| ATGGGGG | 662865 | 0.0 | 20.548506 | 25-29 |
| ATGGGGT | 409095 | 0.0 | 20.168785 | 25-29 |
| GAAACCG | 84915 | 0.0 | 19.927187 | 85-89 |
| TACGCAC | 25275 | 0.0 | 19.827412 | 50-54 |
| AAACCGC | 84660 | 0.0 | 19.812016 | 85-89 |