Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6155076_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 115316269 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 11200772 | 9.713089139226314 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTCGGGGACGGGTGGCGTGTG | 2621609 | 2.273407753072552 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 625625 | 0.5425296928397848 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 609600 | 0.5286331280801324 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAACCCATCGGCTGGCACCAC | 566454 | 0.491217765638949 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAGTTGAGTGCTGAAAAA | 463596 | 0.40202133143936525 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGTAAGTTAGAAAAAAAA | 319902 | 0.27741272135677575 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 281868 | 0.2444303847534297 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 257969 | 0.2237056420894089 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 213875 | 0.1854681926970773 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTATCAACGCAGAGTACATGG | 169482 | 0.14697145638660924 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACATGTCGCATATAGGACT | 159894 | 0.1386569313996796 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTATCAACGCAGAGTACATG | 154149 | 0.1336749804140819 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCCGTAAGTTAGAAAAAAAAA | 133249 | 0.1155509115543792 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCGGCGTCGCCAGGAGGAGC | 126915 | 0.1100581913554626 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 124832 | 0.10825185473178985 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 116952 | 0.10141847374545217 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 9918405 | 0.0 | 73.78291 | 1 |
| AGCAGTG | 10150165 | 0.0 | 72.132484 | 2 |
| AGTGGTA | 10178745 | 0.0 | 72.025764 | 5 |
| GTATCAA | 10208865 | 0.0 | 71.79101 | 9 |
| CAGTGGT | 10296775 | 0.0 | 71.28005 | 4 |
| GGTATCA | 10316230 | 0.0 | 71.08412 | 8 |
| GCAGTGG | 10328325 | 0.0 | 70.91334 | 3 |
| GTGGTAT | 10366100 | 0.0 | 70.74295 | 6 |
| TGGTATC | 10375880 | 0.0 | 70.69335 | 7 |
| CATGGGG | 1462270 | 0.0 | 22.803324 | 25-29 |
| ATGGGGC | 294315 | 0.0 | 21.639141 | 25-29 |
| ATGGGAT | 614590 | 0.0 | 21.140047 | 25-29 |
| CGCATAT | 31170 | 0.0 | 20.710209 | 35-39 |
| ATGGGGT | 304385 | 0.0 | 20.609608 | 25-29 |
| ATGGGGG | 608555 | 0.0 | 20.378616 | 25-29 |
| ATGTCGC | 31275 | 0.0 | 19.90845 | 30-34 |
| TGGGAAC | 232255 | 0.0 | 19.716719 | 25-29 |
| ATGGGGA | 469980 | 0.0 | 19.568125 | 25-29 |
| TCGCATA | 33435 | 0.0 | 19.195253 | 35-39 |
| ATGGGAG | 758245 | 0.0 | 19.07118 | 25-29 |