FastQCFastQC Report
Sun 19 Mar 2023
SRR6155055_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6155055_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111099472
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCGAC2536050.0139.681632
ATAGCGA2782000.0139.645691
TATCAGC3128600.0139.560231
GATAGAC3328750.0139.459811
GCGAGTA3795150.0138.517621
AGTTAGC2606500.0137.312242
TCACGCA2614550.0137.140052
GGCTAAC3007800.0136.964162
CGAGTAA3129650.0136.221132
ATCAGCA2680700.0135.960982
TTCACGC3186300.0135.711871
ATCCGTC1801200.0135.1632
GTCGTAG1868050.0135.00411
AGGCTAA3328450.0134.20151
ATAGACA2963150.0133.811222
AGCACCT2894250.0133.78391
TAGGATG4111700.0133.215931
ACCTTAC3247000.0133.153922
CAGATTC2634050.0133.000532
ATGAATC2162600.0132.38782