Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6155065_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 119339105 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 2176545 | 1.8238321797368933 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTCGGGGACGGGTGGCGTGTG | 1137353 | 0.9530430113415046 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 728516 | 0.6104587427566177 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 643547 | 0.5392591137666065 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAACCCATCGGCTGGCACCAC | 373709 | 0.3131488207490747 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCGGCGTCGCCAGGAGGAGC | 342477 | 0.2869780194848956 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 332668 | 0.27875858462320463 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGTAAGTTAGAAAAAAAA | 316492 | 0.26520393294385775 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 224452 | 0.18807917153392428 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCGGCGTCGCCAGGAGGAG | 207046 | 0.1734938434472087 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 198798 | 0.16658244587974746 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 177781 | 0.14897128648652092 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 165720 | 0.1388647920562166 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 146937 | 0.12312560916222726 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCCGTAAGTTAGAAAAAAAAA | 130199 | 0.10910003053902576 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 5019250 | 0.0 | 115.93344 | 1 |
| GTATCAA | 5108155 | 0.0 | 113.89571 | 9 |
| GTGGTAT | 5108870 | 0.0 | 113.85398 | 6 |
| GGTATCA | 5112105 | 0.0 | 113.82572 | 8 |
| AGCAGTG | 5119725 | 0.0 | 113.69546 | 2 |
| TGGTATC | 5127665 | 0.0 | 113.47948 | 7 |
| CAGTGGT | 5137185 | 0.0 | 113.28387 | 4 |
| AGTGGTA | 5158445 | 0.0 | 112.77817 | 5 |
| GCAGTGG | 5186220 | 0.0 | 112.215775 | 3 |
| CATGGGG | 1562610 | 0.0 | 26.204744 | 25-29 |
| GACTGGA | 91165 | 0.0 | 26.109102 | 3 |
| GTGACTG | 94070 | 0.0 | 25.53231 | 1 |
| TGACTGG | 95535 | 0.0 | 25.156115 | 2 |
| AGTTCAG | 98345 | 0.0 | 23.954151 | 9 |
| ATGGGGC | 396155 | 0.0 | 23.786161 | 25-29 |
| CAACGCA | 5079045 | 0.0 | 23.390644 | 10-14 |
| ATCAACG | 5097305 | 0.0 | 23.311514 | 10-14 |
| AGAGTAC | 5077895 | 0.0 | 23.288977 | 15-19 |
| CAGAGTA | 5084760 | 0.0 | 23.268068 | 15-19 |
| ATGGGGA | 509075 | 0.0 | 23.238338 | 25-29 |