Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6155055_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 111099472 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 6528570 | 5.876328557169021 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTCGGGGACGGGTGGCGTGTG | 1772228 | 1.5951722974885068 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 612683 | 0.5514724678439515 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 423844 | 0.3814995628422069 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 382828 | 0.34458129557987455 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 243882 | 0.2195167948232913 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 235084 | 0.21159776528910956 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 223858 | 0.20149330682687674 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAACCCATCGGCTGGCACCAC | 214122 | 0.19272998885179218 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACATGTCGCATATAGGACT | 165907 | 0.14933194281967424 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGTAAGTTAGAAAAAAAA | 157772 | 0.14200967579755913 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGCCGGGCACGGTGGCTCA | 142512 | 0.1282742369828724 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 138878 | 0.12500329434508925 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 129740 | 0.11677823275343738 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTAGGAGCCTCTCTCCCTAC | 128767 | 0.11590244101250095 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 6582260 | 0.0 | 83.531654 | 1 |
| GTATCAA | 6752790 | 0.0 | 81.566345 | 9 |
| AGCAGTG | 6748765 | 0.0 | 81.48662 | 2 |
| AGTGGTA | 6753545 | 0.0 | 81.3588 | 5 |
| GGTATCA | 6783660 | 0.0 | 81.18593 | 8 |
| GTGGTAT | 6798380 | 0.0 | 81.04202 | 6 |
| TGGTATC | 6818625 | 0.0 | 80.81313 | 7 |
| CAGTGGT | 6812285 | 0.0 | 80.68466 | 4 |
| GCAGTGG | 6853930 | 0.0 | 80.19679 | 3 |
| CATGGGG | 1382475 | 0.0 | 24.882326 | 25-29 |
| ATGGGGG | 560200 | 0.0 | 23.79638 | 25-29 |
| ATGGGGC | 301500 | 0.0 | 22.103767 | 25-29 |
| GACTGGA | 79580 | 0.0 | 21.80862 | 3 |
| ATGGGGT | 277310 | 0.0 | 21.575384 | 25-29 |
| TGACTGG | 81920 | 0.0 | 21.308739 | 2 |
| GAAACCG | 95730 | 0.0 | 21.280437 | 85-89 |
| ATGGGAG | 509435 | 0.0 | 21.053759 | 25-29 |
| AGTTCAG | 82390 | 0.0 | 20.974915 | 9 |
| CGCATAT | 31650 | 0.0 | 20.900612 | 35-39 |
| ATGGGGA | 445230 | 0.0 | 20.780434 | 25-29 |