Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6155057_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 117194745 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 6332204 | 5.403146702524929 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTCGGGGACGGGTGGCGTGTG | 1957142 | 1.6699912611269387 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 488363 | 0.41671066394657885 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 482492 | 0.4117010536607252 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 457608 | 0.3904680197051497 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 291064 | 0.24835925877051912 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 272056 | 0.232140101503698 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 264910 | 0.22604255847819799 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAACCCATCGGCTGGCACCAC | 251306 | 0.21443452946631694 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTAGGAGCCTCTCTCCCTAC | 245467 | 0.20945222415902692 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACATGTCGCATATAGGACT | 190924 | 0.1629117414778282 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGTAAGTTAGAAAAAAAA | 166844 | 0.1423647451086651 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCGGCGTCGCCAGGAGGAGC | 149297 | 0.12739223076939157 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 135536 | 0.11565023670643254 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 118838 | 0.10140215757967645 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 7043090 | 0.0 | 88.7813 | 1 |
| GTATCAA | 7227575 | 0.0 | 86.78321 | 9 |
| AGCAGTG | 7216380 | 0.0 | 86.72235 | 2 |
| AGTGGTA | 7230225 | 0.0 | 86.48046 | 5 |
| GGTATCA | 7265140 | 0.0 | 86.32894 | 8 |
| GTGGTAT | 7282905 | 0.0 | 86.135956 | 6 |
| CAGTGGT | 7274390 | 0.0 | 85.97653 | 4 |
| TGGTATC | 7304015 | 0.0 | 85.91274 | 7 |
| GCAGTGG | 7317395 | 0.0 | 85.473305 | 3 |
| GACTGGA | 81745 | 0.0 | 26.631807 | 3 |
| TGACTGG | 86875 | 0.0 | 25.274715 | 2 |
| CATGGGG | 1425230 | 0.0 | 25.14717 | 25-29 |
| AGTTCAG | 90580 | 0.0 | 24.18236 | 9 |
| ATGGGGC | 301375 | 0.0 | 22.654621 | 25-29 |
| ATGGGGG | 607835 | 0.0 | 22.368212 | 25-29 |
| ATGGGAG | 616150 | 0.0 | 22.17011 | 25-29 |
| ATGGGGT | 289665 | 0.0 | 21.833134 | 25-29 |
| ATGGGGA | 462100 | 0.0 | 21.584047 | 25-29 |
| ACTGGAG | 102780 | 0.0 | 21.3952 | 4 |
| CTGGAGT | 103325 | 0.0 | 21.207136 | 5 |