Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6155049_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 119643132 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 38 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 272209 | 0.22751744747036545 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 174318 | 0.14569829215102795 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGATA | 124354 | 0.10393743286493036 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 319610 | 0.0 | 139.67746 | 1 |
| TATCAGC | 324030 | 0.0 | 139.65442 | 1 |
| TAGCGAC | 295175 | 0.0 | 139.53525 | 2 |
| AGTTAGC | 327655 | 0.0 | 138.94855 | 2 |
| TCACGCA | 286705 | 0.0 | 137.32127 | 2 |
| GCCACAT | 411760 | 0.0 | 137.10081 | 1 |
| ATCAGCA | 290910 | 0.0 | 136.58427 | 2 |
| ATCATTC | 363780 | 0.0 | 135.26851 | 1 |
| TTCACGC | 341225 | 0.0 | 135.15018 | 1 |
| GGCTAAC | 247225 | 0.0 | 135.1231 | 2 |
| GTCTGTC | 288625 | 0.0 | 134.86967 | 1 |
| GAGTTAG | 368775 | 0.0 | 133.76279 | 1 |
| GTCGTAG | 172915 | 0.0 | 133.68825 | 1 |
| ATGAATC | 281660 | 0.0 | 133.4949 | 2 |
| ATCCGTC | 165415 | 0.0 | 133.00574 | 2 |
| TAAGGTC | 201610 | 0.0 | 131.78944 | 2 |
| CCTAATC | 202765 | 0.0 | 131.56802 | 1 |
| AGGCTAA | 280130 | 0.0 | 131.17973 | 1 |
| TCGTAGA | 149745 | 0.0 | 130.86746 | 2 |
| GCGAGTA | 193560 | 0.0 | 130.72583 | 1 |