Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6155050_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 118443991 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 534319 | 0.45111532926984876 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 289931 | 0.244783207279802 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 207567 | 0.17524485476008655 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGATAC | 131596 | 0.11110399007071621 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GAGCTGA | 907095 | 0.0 | 140.94121 | 1 |
| ATGCCTA | 347250 | 0.0 | 140.54689 | 1 |
| GTTACCG | 712745 | 0.0 | 140.44667 | 1 |
| AGCTGAA | 784940 | 0.0 | 139.85226 | 2 |
| TTACCGT | 435355 | 0.0 | 139.20383 | 2 |
| TACCGTC | 287440 | 0.0 | 138.83804 | 3 |
| TGCCTAA | 319625 | 0.0 | 136.79726 | 2 |
| CTCAATG | 197360 | 0.0 | 136.6937 | 1 |
| GCTGAAT | 305135 | 0.0 | 136.00111 | 3 |
| AACATCG | 280155 | 0.0 | 135.38437 | 2 |
| TTACCGG | 305475 | 0.0 | 135.22 | 2 |
| ACGTATC | 154270 | 0.0 | 134.8064 | 1 |
| GCTGAAG | 265285 | 0.0 | 133.6612 | 3 |
| GCCTAAT | 134340 | 0.0 | 133.6095 | 3 |
| ACTTCGA | 128790 | 0.0 | 133.12415 | 2 |
| ACTAGTA | 151760 | 0.0 | 133.10059 | 2 |
| CTGGCAT | 173550 | 0.0 | 132.77751 | 1 |
| CAAGCTA | 183245 | 0.0 | 132.76036 | 2 |
| GACTAGT | 176865 | 0.0 | 132.37227 | 1 |
| ACGCTTA | 164910 | 0.0 | 131.99216 | 2 |