Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6155073_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 133368170 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 12901719 | 9.67376173790193 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTCGGGGACGGGTGGCGTGTG | 3304617 | 2.4778153587921317 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 878008 | 0.6583339937857736 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 789523 | 0.5919875784454417 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAACCCATCGGCTGGCACCAC | 535803 | 0.40174728347850913 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAGTTGAGTGCTGAAAAA | 471063 | 0.35320496637241106 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 299016 | 0.22420342125111262 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGTAAGTTAGAAAAAAAA | 285419 | 0.2140083349722801 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 280419 | 0.21025931449760463 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTATCAACGCAGAGTACATGG | 280127 | 0.2100403717018836 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTATCAACGCAGAGTACATG | 256411 | 0.19225801778640286 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 171448 | 0.1285524124684323 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTGGTATCAACGCAGAGTACA | 165243 | 0.12389987805936005 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTAGGAGCCTCTCTCCCTAC | 150872 | 0.11312444341104778 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACATGTCGCATATAGGACT | 145258 | 0.10891504322208215 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 140190 | 0.10511503606895109 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCCGTAAGTTAGAAAAAAAAA | 136767 | 0.10254845665198825 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 11002340 | 0.0 | 69.64701 | 1 |
| AGCAGTG | 11296290 | 0.0 | 67.86163 | 2 |
| AGTGGTA | 11300330 | 0.0 | 67.7863 | 5 |
| GTATCAA | 11419570 | 0.0 | 67.0827 | 9 |
| CAGTGGT | 11431675 | 0.0 | 67.07918 | 4 |
| GCAGTGG | 11455040 | 0.0 | 66.93418 | 3 |
| GGTATCA | 11543845 | 0.0 | 66.38753 | 8 |
| GTGGTAT | 11549695 | 0.0 | 66.32274 | 6 |
| TGGTATC | 11571495 | 0.0 | 66.23959 | 7 |
| GACTGGA | 83170 | 0.0 | 26.078827 | 3 |
| TGACTGG | 88060 | 0.0 | 24.687902 | 2 |
| AGTTCAG | 94110 | 0.0 | 22.857845 | 9 |
| CATGGGG | 1606950 | 0.0 | 22.488085 | 25-29 |
| GTGACTG | 99685 | 0.0 | 21.881104 | 1 |
| ACTGGAG | 99330 | 0.0 | 21.817528 | 4 |
| ATGGGGC | 338835 | 0.0 | 21.72066 | 25-29 |
| CTGGAGT | 102135 | 0.0 | 21.202732 | 5 |
| TGGAGTT | 105365 | 0.0 | 20.627928 | 6 |
| ATGGGGG | 642175 | 0.0 | 20.602242 | 25-29 |
| ATGGGGT | 344955 | 0.0 | 19.993263 | 25-29 |