Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6155061_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 108212639 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 5503689 | 5.085994622125424 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTCGGGGACGGGTGGCGTGTG | 2237051 | 2.0672733062170305 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 773098 | 0.7144248649180435 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAACCCATCGGCTGGCACCAC | 399791 | 0.36944945035487026 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 345183 | 0.31898584415818565 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 326596 | 0.30180947717207046 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGTAAGTTAGAAAAAAAA | 236794 | 0.21882286781676213 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 182606 | 0.16874738633811526 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 176028 | 0.1626686139684663 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 159528 | 0.1474208571884103 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTATCAACGCAGAGTACATG | 146592 | 0.13546661587284642 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCCGTAAGTTAGAAAAAAAAA | 141512 | 0.13077215499753223 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 139435 | 0.1288527858561882 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTATCAACGCAGAGTACATGG | 129273 | 0.11946201589261675 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 117836 | 0.10889301017785917 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCGGCGTCGCCAGGAGGAGC | 113043 | 0.10446376785987077 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 6178375 | 0.0 | 89.34464 | 1 |
| AGCAGTG | 6318795 | 0.0 | 87.466545 | 2 |
| AGTGGTA | 6325575 | 0.0 | 87.33024 | 5 |
| GTATCAA | 6350220 | 0.0 | 87.020226 | 9 |
| CAGTGGT | 6365815 | 0.0 | 86.80806 | 4 |
| GTGGTAT | 6366925 | 0.0 | 86.719986 | 6 |
| GGTATCA | 6375565 | 0.0 | 86.65881 | 8 |
| TGGTATC | 6380355 | 0.0 | 86.56307 | 7 |
| GCAGTGG | 6398045 | 0.0 | 86.335724 | 3 |
| CATGGGG | 1214925 | 0.0 | 24.507984 | 25-29 |
| GACTGGA | 80570 | 0.0 | 23.168682 | 3 |
| AGTTCAG | 81070 | 0.0 | 22.770473 | 9 |
| TGACTGG | 83675 | 0.0 | 22.481146 | 2 |
| ATGGGGC | 283665 | 0.0 | 22.35398 | 25-29 |
| ATGGGAG | 564465 | 0.0 | 22.064886 | 25-29 |
| ATGGGGG | 496515 | 0.0 | 21.516787 | 25-29 |
| ATGGGAC | 282810 | 0.0 | 20.997429 | 25-29 |
| ATGGGGT | 252435 | 0.0 | 20.78879 | 25-29 |
| ATGGGGA | 404135 | 0.0 | 20.470284 | 25-29 |
| GAAACCG | 82355 | 0.0 | 20.341805 | 85-89 |