Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6155077_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 132628945 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 7895127 | 5.952793336326395 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTCGGGGACGGGTGGCGTGTG | 2261500 | 1.7051330688033446 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 1036924 | 0.7818233041060533 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 590766 | 0.44542765532817896 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 565171 | 0.42612945462244306 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 543795 | 0.4100123091531792 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAACCCATCGGCTGGCACCAC | 362532 | 0.2733430474019076 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 331819 | 0.25018596053825204 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGTAAGTTAGAAAAAAAA | 247964 | 0.18696069700320697 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 203800 | 0.1536617817475665 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 196948 | 0.1484954886733058 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGGAAAAAAAAAAAAAAAA | 192561 | 0.14518776425462782 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACATGTCGCATATAGGACT | 145420 | 0.10964424093096721 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 142287 | 0.10728201147947004 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGTATCAACGCAGAGTACATG | 134346 | 0.10129463067055235 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 9162285 | 0.0 | 90.48794 | 1 |
| AGTGGTA | 9456265 | 0.0 | 87.823845 | 5 |
| AGCAGTG | 9445580 | 0.0 | 87.821655 | 2 |
| GTATCAA | 9455190 | 0.0 | 87.76602 | 9 |
| GGTATCA | 9516835 | 0.0 | 87.24579 | 8 |
| CAGTGGT | 9559325 | 0.0 | 86.99557 | 4 |
| GTGGTAT | 9544935 | 0.0 | 86.99174 | 6 |
| TGGTATC | 9560075 | 0.0 | 86.87914 | 7 |
| GCAGTGG | 9623500 | 0.0 | 86.21821 | 3 |
| CATGGGG | 1907500 | 0.0 | 24.834705 | 25-29 |
| ATGGGGG | 757750 | 0.0 | 23.53314 | 25-29 |
| ATGGGGC | 389550 | 0.0 | 23.128517 | 25-29 |
| ATGGGAG | 821300 | 0.0 | 23.07746 | 25-29 |
| ATGGGGT | 355385 | 0.0 | 22.533968 | 25-29 |
| ATGGGAT | 782180 | 0.0 | 21.945585 | 25-29 |
| ATGGGAC | 444970 | 0.0 | 21.648472 | 25-29 |
| ATGGGGA | 638550 | 0.0 | 21.480621 | 25-29 |
| CGCATAT | 29590 | 0.0 | 19.811096 | 35-39 |
| CATGGGT | 846430 | 0.0 | 19.707651 | 25-29 |
| TGGGAAC | 226725 | 0.0 | 19.575836 | 25-29 |