Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6155079_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 117832473 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 41 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 3783522 | 3.2109332034472367 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTCGGGGACGGGTGGCGTGTG | 1298904 | 1.1023311035829657 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 888700 | 0.754206355322781 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 406742 | 0.3451866787180135 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 281960 | 0.23928887582627584 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAACCCATCGGCTGGCACCAC | 272729 | 0.23145487237631007 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 240225 | 0.20386994678453368 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGTAAGTTAGAAAAAAAA | 235303 | 0.19969283000620722 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAAAAAAAAAAAAAAAAAA | 193426 | 0.16415339089081155 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAA | 193277 | 0.16402694017972447 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCGGCGTCGCCAGGAGGAGC | 190148 | 0.16137147524689566 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTAGAATCTTAGTTCAACTTT | 160191 | 0.135948093018467 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 157177 | 0.13339022427204766 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 5941800 | 0.0 | 104.42618 | 1 |
| AGCAGTG | 6073420 | 0.0 | 102.196556 | 2 |
| GTATCAA | 6068600 | 0.0 | 102.072235 | 9 |
| AGTGGTA | 6070195 | 0.0 | 102.047195 | 5 |
| GGTATCA | 6094355 | 0.0 | 101.68093 | 8 |
| GTGGTAT | 6093800 | 0.0 | 101.671165 | 6 |
| TGGTATC | 6111105 | 0.0 | 101.424965 | 7 |
| CAGTGGT | 6130500 | 0.0 | 101.149895 | 4 |
| GCAGTGG | 6163055 | 0.0 | 100.7066 | 3 |
| TAGCGAC | 8015 | 0.0 | 30.825214 | 2 |
| CATGGGG | 1471175 | 0.0 | 25.656063 | 25-29 |
| ATGGGAG | 660600 | 0.0 | 23.84612 | 25-29 |
| ATGGGGG | 569040 | 0.0 | 23.118488 | 25-29 |
| ATGGGGA | 482285 | 0.0 | 22.98755 | 25-29 |
| ATGGGGC | 346445 | 0.0 | 22.922924 | 25-29 |
| ATGGGGT | 287090 | 0.0 | 22.565702 | 25-29 |
| ATGGGAT | 647890 | 0.0 | 21.71222 | 25-29 |
| ATGGGAC | 374940 | 0.0 | 21.486128 | 25-29 |
| CATGGGT | 596740 | 0.0 | 21.047075 | 25-29 |
| AGAGTAC | 6023040 | 0.0 | 20.915344 | 15-19 |