Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026837_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 222614606 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 626262 | 0.2813211636257147 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 360387 | 0.16188829945866176 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 345572 | 0.15523330037023716 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 338366 | 0.1519963160009366 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGATA | 287443 | 0.12912135693378538 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATGCCTA | 1164300 | 0.0 | 143.19852 | 1 |
| GCGAGTA | 2667985 | 0.0 | 142.81354 | 1 |
| CGAGTAA | 2591030 | 0.0 | 142.38649 | 2 |
| TGCCTAA | 1129145 | 0.0 | 142.07062 | 2 |
| AACGTGA | 909570 | 0.0 | 141.76645 | 1 |
| ACGTGAT | 908080 | 0.0 | 141.02113 | 2 |
| GCTGATC | 487750 | 0.0 | 140.35472 | 2 |
| ACGTATC | 283045 | 0.0 | 140.23967 | 1 |
| GCCTAAT | 363015 | 0.0 | 139.59836 | 3 |
| GCCTAAG | 460250 | 0.0 | 139.47266 | 3 |
| CGAACTT | 624120 | 0.0 | 139.34747 | 1 |
| AGAGTCA | 308430 | 0.0 | 139.25279 | 1 |
| GAACTTA | 605500 | 0.0 | 139.07043 | 2 |
| CGCTGAT | 491520 | 0.0 | 139.01663 | 1 |
| CAAGCTA | 217750 | 0.0 | 138.1488 | 2 |
| TATCAGC | 195655 | 0.0 | 138.09537 | 1 |
| AGCACCT | 335020 | 0.0 | 137.94398 | 1 |
| ATCAGCA | 188205 | 0.0 | 137.43524 | 2 |
| CTGATCA | 143060 | 0.0 | 137.4336 | 3 |
| GAGTCAA | 301150 | 0.0 | 137.06781 | 2 |