Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026853_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 157803568 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 1605496 | 1.0174015837208445 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 1373872 | 0.870621632585646 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 693102 | 0.43921820576325626 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 663675 | 0.42057033843493324 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC | 645496 | 0.40905032007894776 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 585365 | 0.3709453515018114 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 514836 | 0.3262511783003538 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 378344 | 0.23975630259513522 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 363596 | 0.2304105063074366 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACACTCGCTTCTGGAACG | 288390 | 0.18275252179342358 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCAC | 286132 | 0.1813216289253992 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACTCTTCTGGTCCCCACAG | 212116 | 0.13441774649860896 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 7672135 | 0.0 | 126.813515 | 1 |
| GGTATCA | 7771115 | 0.0 | 125.0652 | 8 |
| GTGGTAT | 7785175 | 0.0 | 124.92571 | 6 |
| TGGTATC | 7792915 | 0.0 | 124.66499 | 7 |
| GTATCAA | 7803625 | 0.0 | 124.60545 | 9 |
| CAGTGGT | 7820670 | 0.0 | 124.3964 | 4 |
| AGCAGTG | 7849785 | 0.0 | 123.92726 | 2 |
| AGTGGTA | 7855345 | 0.0 | 123.847534 | 5 |
| GCAGTGG | 8032635 | 0.0 | 121.11083 | 3 |
| CATGGGG | 2408250 | 0.0 | 26.378948 | 25-29 |
| ACATGGG | 7464845 | 0.0 | 25.91072 | 20-24 |
| CAACGCA | 7756800 | 0.0 | 25.575424 | 10-14 |
| AGAGTAC | 7746670 | 0.0 | 25.57521 | 15-19 |
| TACATGG | 7711250 | 0.0 | 25.57427 | 20-24 |
| GTACATG | 7730865 | 0.0 | 25.558979 | 20-24 |
| AGTACAT | 7741715 | 0.0 | 25.524162 | 20-24 |
| ATCAACG | 7765745 | 0.0 | 25.496517 | 10-14 |
| CAGAGTA | 7774230 | 0.0 | 25.495474 | 15-19 |
| TCAACGC | 7795545 | 0.0 | 25.42007 | 10-14 |
| GCAGAGT | 7790015 | 0.0 | 25.418028 | 15-19 |