Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026843_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 184691864 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 3968151 | 2.1485250698428167 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 429194 | 0.23238381523941953 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 405718 | 0.21967291423297344 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 206171 | 0.11162971423581496 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 9931625 | 0.0 | 111.61572 | 1 |
| TGGTATC | 9919630 | 0.0 | 110.290726 | 7 |
| GTGGTAT | 10035945 | 0.0 | 110.09817 | 6 |
| GGTATCA | 9943185 | 0.0 | 110.052826 | 8 |
| GTATCAA | 10030900 | 0.0 | 109.98473 | 9 |
| AGTGGTA | 10068115 | 0.0 | 109.74689 | 5 |
| CAGTGGT | 10053325 | 0.0 | 109.681526 | 4 |
| AGCAGTG | 10035355 | 0.0 | 109.61057 | 2 |
| GCAGTGG | 10337270 | 0.0 | 106.603836 | 3 |
| GGTATAA | 182475 | 0.0 | 63.67929 | 8 |
| TGGTATA | 194775 | 0.0 | 59.680126 | 7 |
| GTTGTAT | 181435 | 0.0 | 53.386784 | 6 |
| TTGTATC | 188555 | 0.0 | 51.28689 | 7 |
| GCAGTTG | 201080 | 0.0 | 48.005356 | 3 |
| CAGTTGT | 209925 | 0.0 | 46.13547 | 4 |
| TGTATCA | 219345 | 0.0 | 44.126987 | 8 |
| GTATAAA | 274275 | 0.0 | 42.52847 | 9 |
| AGTTGTA | 244310 | 0.0 | 39.885887 | 5 |
| AGCAGTT | 271655 | 0.0 | 35.71138 | 2 |
| CATGGGG | 1861760 | 0.0 | 25.482477 | 25-29 |