Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026871_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 211217899 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 10038896 | 4.752862350931727 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 3098529 | 1.4669822087379063 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 1194294 | 0.5654321937933868 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 512389 | 0.24258786893813386 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 407785 | 0.19306365697729055 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 242922 | 0.11501013936323645 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 231701 | 0.10969761610970291 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 14522865 | 0.0 | 93.04629 | 1 |
| GTATCAA | 14884085 | 0.0 | 90.77391 | 9 |
| AGCAGTG | 14881690 | 0.0 | 90.62405 | 2 |
| AGTGGTA | 14899700 | 0.0 | 90.535675 | 5 |
| GGTATCA | 14903115 | 0.0 | 90.44622 | 8 |
| CAGTGGT | 14939395 | 0.0 | 90.28263 | 4 |
| GTGGTAT | 14960835 | 0.0 | 90.13005 | 6 |
| TGGTATC | 14952845 | 0.0 | 90.10181 | 7 |
| GCAGTGG | 15198695 | 0.0 | 88.72182 | 3 |
| CATGGGG | 2137525 | 0.0 | 24.704575 | 25-29 |
| ATGGGAG | 1889780 | 0.0 | 23.073753 | 25-29 |
| ATGGGAC | 800520 | 0.0 | 22.76964 | 25-29 |
| ATGGGGG | 754090 | 0.0 | 22.633436 | 25-29 |
| AAACCGC | 259625 | 0.0 | 22.434834 | 85-89 |
| GAAACCG | 263820 | 0.0 | 22.260944 | 85-89 |
| ATGGGAT | 1626310 | 0.0 | 22.025366 | 25-29 |
| ATGGGGT | 484410 | 0.0 | 21.842115 | 25-29 |
| CATGGGT | 941640 | 0.0 | 21.837187 | 25-29 |
| CGCAGAT | 274755 | 0.0 | 21.553127 | 90-94 |
| CATGGGC | 1108235 | 0.0 | 21.277817 | 25-29 |