Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026874_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 221463314 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 13783702 | 6.223921132147422 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 2359117 | 1.0652405391170117 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 572120 | 0.2583362407373711 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 378998 | 0.17113353591376312 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 293600 | 0.13257274746642686 | No Hit |
| AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA | 250907 | 0.11329506249509118 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 15159250 | 0.0 | 66.44046 | 1 |
| AGCAGTG | 15400355 | 0.0 | 65.32105 | 2 |
| CAGTGGT | 15423740 | 0.0 | 65.17935 | 4 |
| AGTGGTA | 15395340 | 0.0 | 65.12512 | 5 |
| GTATCAA | 15472525 | 0.0 | 64.93187 | 9 |
| TGGTATC | 15441410 | 0.0 | 64.779045 | 7 |
| GGTATCA | 15483990 | 0.0 | 64.67707 | 8 |
| GTGGTAT | 15500425 | 0.0 | 64.673706 | 6 |
| GCAGTGG | 15782135 | 0.0 | 63.698055 | 3 |
| CATGGGG | 1666205 | 0.0 | 22.662289 | 25-29 |
| CATGGGC | 1069775 | 0.0 | 20.987753 | 25-29 |
| ATGGGAT | 1064070 | 0.0 | 20.8816 | 25-29 |
| GTTGTAT | 169155 | 0.0 | 20.761618 | 6 |
| ATGGGGG | 533100 | 0.0 | 20.731031 | 25-29 |
| ATGGGCG | 157095 | 0.0 | 20.440071 | 25-29 |
| TTGTATC | 174135 | 0.0 | 20.163773 | 7 |
| ATGGGAC | 542030 | 0.0 | 19.97586 | 25-29 |
| AAACCGC | 152210 | 0.0 | 19.54657 | 85-89 |
| GGTATAA | 143735 | 0.0 | 19.504667 | 8 |
| ATGGGCT | 436455 | 0.0 | 19.297316 | 25-29 |