Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026854_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 165352859 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 48 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 1194007 | 0.7220963745174797 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1068289 | 0.6460662406810879 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 520943 | 0.31504928499603385 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGATA | 384394 | 0.23246891666989564 | No Hit |
| AGATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 253548 | 0.15333753618375598 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGAT | 190830 | 0.11540774145308247 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 302315 | 0.0 | 138.02574 | 1 |
| ACTAGTA | 433510 | 0.0 | 136.90125 | 2 |
| CTCGGTA | 467340 | 0.0 | 136.61841 | 2 |
| TAGCGAC | 304270 | 0.0 | 136.52763 | 2 |
| ATGCCTA | 215730 | 0.0 | 135.82658 | 1 |
| GACTAGT | 437905 | 0.0 | 135.75424 | 1 |
| CTTCACA | 1220265 | 0.0 | 135.67767 | 2 |
| CTCAATG | 354825 | 0.0 | 134.10846 | 1 |
| AGATCTG | 450370 | 0.0 | 134.0612 | 2 |
| TCTTCAC | 1249140 | 0.0 | 133.7442 | 1 |
| TCGTAGA | 241760 | 0.0 | 133.06032 | 2 |
| ACGTGAT | 262935 | 0.0 | 132.51231 | 2 |
| GTCGTAG | 245520 | 0.0 | 132.31494 | 1 |
| TCCTGTA | 437065 | 0.0 | 132.29376 | 2 |
| AACGTGA | 262890 | 0.0 | 132.26683 | 1 |
| TCAATGA | 359370 | 0.0 | 131.45854 | 2 |
| ATCCTGT | 441790 | 0.0 | 131.19228 | 1 |
| TGCCTAA | 223135 | 0.0 | 130.87602 | 2 |
| CAGATCT | 459765 | 0.0 | 130.66345 | 1 |
| ACGTATC | 132765 | 0.0 | 130.60205 | 1 |