Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026846_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 217705443 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 53 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1868102 | 0.8580869519187906 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCGCGTTGATAC | 876644 | 0.4026743603282349 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 583749 | 0.2681370717956739 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGATA | 501288 | 0.2302597459632647 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACT | 455856 | 0.2093911818272729 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 451538 | 0.20740776793531984 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 442378 | 0.2032002479607274 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 389257 | 0.17879984746178348 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGAT | 241293 | 0.11083461978486225 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACTGTGT | 2450375 | 0.0 | 138.56422 | 2 |
| CACTGTG | 4089285 | 0.0 | 138.49261 | 1 |
| ACTGTGG | 1982660 | 0.0 | 137.61003 | 2 |
| GTGTGAC | 852185 | 0.0 | 136.14423 | 5 |
| CTGTGTG | 1616800 | 0.0 | 136.14124 | 3 |
| TGTGACT | 648670 | 0.0 | 135.58113 | 6 |
| GACTAGT | 289895 | 0.0 | 134.25948 | 1 |
| TGTGTGC | 833650 | 0.0 | 133.9406 | 4 |
| CTGTGTC | 971975 | 0.0 | 133.6993 | 3 |
| CAAGCTA | 486405 | 0.0 | 133.63652 | 2 |
| CTGTGGC | 902095 | 0.0 | 133.33318 | 3 |
| AGAGTCA | 319465 | 0.0 | 133.12546 | 1 |
| ACAAGCT | 541870 | 0.0 | 132.52542 | 1 |
| TGTGTGA | 861740 | 0.0 | 132.26112 | 4 |
| GTGACTC | 340045 | 0.0 | 132.01369 | 7 |
| ACTAGTA | 269980 | 0.0 | 131.78853 | 2 |
| TGTGCCT | 599560 | 0.0 | 131.76491 | 6 |
| GTGTGCC | 870930 | 0.0 | 131.72266 | 5 |
| TGTGTCA | 390445 | 0.0 | 130.16861 | 4 |
| CCGAAGT | 378275 | 0.0 | 129.8621 | 1 |