Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026868_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 166735062 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 2033676 | 1.219705067192166 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 736810 | 0.4419046547030402 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 576473 | 0.3457419171979556 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 369699 | 0.22172840886939543 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 238883 | 0.14327100559089365 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCAC | 209207 | 0.12547270951325162 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT | 191574 | 0.11489724938597498 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 12076230 | 0.0 | 131.23064 | 1 |
| TGGTATC | 12244115 | 0.0 | 129.08054 | 7 |
| GGTATCA | 12259365 | 0.0 | 128.9373 | 8 |
| GTGGTAT | 12262530 | 0.0 | 128.93173 | 6 |
| GTATCAA | 12284570 | 0.0 | 128.80212 | 9 |
| AGTGGTA | 12286125 | 0.0 | 128.7456 | 5 |
| AGCAGTG | 12318205 | 0.0 | 128.56104 | 2 |
| CAGTGGT | 12323520 | 0.0 | 128.49992 | 4 |
| GCAGTGG | 12577520 | 0.0 | 125.8765 | 3 |
| ACATGGG | 11846330 | 0.0 | 26.491829 | 20-24 |
| CAACGCA | 12250875 | 0.0 | 26.38005 | 10-14 |
| ATCAACG | 12239440 | 0.0 | 26.325003 | 10-14 |
| TCAACGC | 12266765 | 0.0 | 26.312283 | 10-14 |
| AGAGTAC | 12259695 | 0.0 | 26.30635 | 15-19 |
| ATGGGAT | 2205280 | 0.0 | 26.301641 | 25-29 |
| TACATGG | 12208120 | 0.0 | 26.272503 | 20-24 |
| GTACATG | 12237610 | 0.0 | 26.248402 | 20-24 |
| AGTACAT | 12258860 | 0.0 | 26.244987 | 20-24 |
| CATGGGG | 2350900 | 0.0 | 26.235462 | 25-29 |
| CAGAGTA | 12295680 | 0.0 | 26.235275 | 15-19 |