Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026875_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 144273908 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 12793521 | 8.867522324272246 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 2954459 | 2.0478124152566797 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 1204733 | 0.8350317924430244 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC | 936735 | 0.649275404669845 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 919151 | 0.6370874766905185 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 800227 | 0.5546581575928476 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 621506 | 0.43078198172880994 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 584422 | 0.40507809631108077 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACACTCGCTTCTGGAACG | 410873 | 0.28478676823532084 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACTCTTCTGGTCCCCACAG | 272004 | 0.18853305061924294 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 231752 | 0.16063334196229023 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTCTTGCTTCAAC | 217765 | 0.15093858828583195 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACACTCGCTTCTGGAACGT | 206657 | 0.14323934442809994 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTCTTGCTTCAACA | 149097 | 0.10334301057402563 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 147847 | 0.1024766030459229 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 13347000 | 0.0 | 80.76952 | 1 |
| AGCAGTG | 13775875 | 0.0 | 78.25674 | 2 |
| AGTGGTA | 13743255 | 0.0 | 78.25461 | 5 |
| GTATCAA | 13746705 | 0.0 | 78.00908 | 9 |
| CAGTGGT | 13876335 | 0.0 | 77.49053 | 4 |
| GGTATCA | 13884040 | 0.0 | 77.34297 | 8 |
| GTGGTAT | 13940125 | 0.0 | 76.9691 | 6 |
| TGGTATC | 13972015 | 0.0 | 76.81218 | 7 |
| GCAGTGG | 14223135 | 0.0 | 75.57922 | 3 |
| ACACTCG | 197200 | 0.0 | 25.5378 | 30-34 |
| CATGGGG | 2202775 | 0.0 | 24.651054 | 25-29 |
| ATGGGGG | 847140 | 0.0 | 24.386585 | 25-29 |
| TGCCGAC | 157935 | 0.0 | 24.031385 | 80-84 |
| GGTCGGC | 158975 | 0.0 | 23.98455 | 115-119 |
| ACGTCAA | 153635 | 0.0 | 23.891123 | 95-99 |
| CTAGTCC | 209735 | 0.0 | 23.83498 | 70-74 |
| GTGATAT | 75225 | 0.0 | 23.735126 | 6 |
| CGCTTCT | 215865 | 0.0 | 23.684492 | 35-39 |
| GAAACCG | 248690 | 0.0 | 23.665806 | 85-89 |
| CGTACGG | 26770 | 0.0 | 23.408445 | 50-54 |