Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026882_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 157002741 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 60 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 892081 | 0.5681945387182762 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 268415 | 0.1709619833962007 | No Hit |
| CAGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTT | 167927 | 0.10695800527457033 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TACGTGA | 1489555 | 0.0 | 142.79959 | 4 |
| CTACGTG | 2349365 | 0.0 | 142.5432 | 3 |
| ACGTGAC | 1522735 | 0.0 | 142.47478 | 5 |
| TCTACGT | 2808150 | 0.0 | 142.36517 | 2 |
| GGCTAAC | 750235 | 0.0 | 141.83217 | 2 |
| CTCTACG | 2821245 | 0.0 | 141.79279 | 1 |
| TACGTGC | 835770 | 0.0 | 141.22244 | 4 |
| CGTGACT | 897985 | 0.0 | 140.77185 | 6 |
| TAAGGTC | 396965 | 0.0 | 140.13092 | 2 |
| TGACTGG | 712955 | 0.0 | 139.9235 | 8 |
| GTGACTG | 727940 | 0.0 | 139.8998 | 7 |
| AGGCTAA | 757925 | 0.0 | 139.75198 | 1 |
| ACAGTGC | 657835 | 0.0 | 139.50882 | 2 |
| GACAGTG | 644865 | 0.0 | 139.35577 | 1 |
| ATAGCGA | 149230 | 0.0 | 139.1603 | 1 |
| ATGCCTA | 218485 | 0.0 | 138.7513 | 1 |
| GCTAACT | 276555 | 0.0 | 138.24312 | 3 |
| GAACAGG | 509105 | 0.0 | 138.13385 | 1 |
| GACTGGA | 501995 | 0.0 | 137.43898 | 9 |
| AACAGGC | 527870 | 0.0 | 136.92447 | 2 |