Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026835_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 200739060 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 12066741 | 6.011157469801842 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 2182257 | 1.0871112976218977 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 459365 | 0.22883687908073297 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTATCAACGCAGAGTACATGG | 322868 | 0.1608396492441481 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 289308 | 0.1441214280867909 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 233983 | 0.11656077297562317 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTGGTATCAACGCAGAGTACA | 214301 | 0.1067560045364365 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 14893530 | 0.0 | 75.31482 | 1 |
| AGTGGTA | 15141620 | 0.0 | 74.179924 | 5 |
| AGCAGTG | 15153300 | 0.0 | 74.076096 | 2 |
| CAGTGGT | 15166510 | 0.0 | 74.029366 | 4 |
| GTATCAA | 15256300 | 0.0 | 73.69515 | 9 |
| TGGTATC | 15225210 | 0.0 | 73.67167 | 7 |
| GTGGTAT | 15280575 | 0.0 | 73.48059 | 6 |
| GGTATCA | 15303170 | 0.0 | 73.365 | 8 |
| GCAGTGG | 15499325 | 0.0 | 72.401695 | 3 |
| ATGGGAT | 1329060 | 0.0 | 23.82973 | 25-29 |
| CATGGGG | 1606535 | 0.0 | 22.53318 | 25-29 |
| ATGGGAC | 637875 | 0.0 | 22.098194 | 25-29 |
| CATGGGC | 1053575 | 0.0 | 21.579855 | 25-29 |
| ATGGGCG | 157850 | 0.0 | 21.250473 | 25-29 |
| ATGGGGG | 496425 | 0.0 | 20.818594 | 25-29 |
| ATGGGCT | 394455 | 0.0 | 19.999166 | 25-29 |
| ATGGGAG | 1703335 | 0.0 | 19.595167 | 25-29 |
| TGGGATA | 378390 | 0.0 | 19.442947 | 25-29 |
| ATGGGGC | 309285 | 0.0 | 18.899292 | 25-29 |
| ATGGGGT | 486250 | 0.0 | 18.643908 | 25-29 |