Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026854_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 165352859 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 17335327 | 10.483838685849394 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 4283325 | 2.590414841269845 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 918094 | 0.5552332179511936 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 393109 | 0.23773946357951997 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 391597 | 0.23682505544098273 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 339112 | 0.20508384436219515 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC | 335645 | 0.20298711617680584 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 328721 | 0.19879970747890122 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 220900 | 0.13359309378497047 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 186997 | 0.11308966844050758 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAAGCAGTGGTATCAACGCAG | 172052 | 0.1040514213304289 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 17414500 | 0.0 | 75.02697 | 1 |
| AGTGGTA | 17901125 | 0.0 | 72.82239 | 5 |
| GTATCAA | 17992845 | 0.0 | 72.56929 | 9 |
| AGCAGTG | 17960930 | 0.0 | 72.559586 | 2 |
| GGTATCA | 18061755 | 0.0 | 72.09271 | 8 |
| CAGTGGT | 18083840 | 0.0 | 72.08616 | 4 |
| TGGTATC | 18118905 | 0.0 | 71.814026 | 7 |
| GTGGTAT | 18144190 | 0.0 | 71.80985 | 6 |
| GCAGTGG | 18456295 | 0.0 | 70.60732 | 3 |
| TTGTATC | 134020 | 0.0 | 28.235348 | 7 |
| GTTGTAT | 139210 | 0.0 | 27.161995 | 6 |
| TGTATCA | 142740 | 0.0 | 26.570974 | 8 |
| GCAGTTG | 143625 | 0.0 | 26.217836 | 3 |
| GGTATAA | 101035 | 0.0 | 24.021177 | 8 |
| CAGTTGT | 162140 | 0.0 | 23.50765 | 4 |
| ATGGGAT | 1362220 | 0.0 | 23.068026 | 25-29 |
| AAACCGC | 194740 | 0.0 | 22.432104 | 85-89 |
| CATGGGG | 1962945 | 0.0 | 22.338442 | 25-29 |
| GAAACCG | 198430 | 0.0 | 22.318283 | 85-89 |
| ACACTCG | 83430 | 0.0 | 22.21137 | 30-34 |