Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026879_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 204145115 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 6723059 | 3.293274492509899 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1950120 | 0.9552616529668123 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 649451 | 0.3181320307370568 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 615795 | 0.3016457190268795 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCAC | 480454 | 0.2353492514381253 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 279973 | 0.13714410947330286 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 277058 | 0.1357162036426882 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 15329645 | 0.0 | 113.227325 | 1 |
| AGCAGTG | 15696755 | 0.0 | 110.574715 | 2 |
| GTATCAA | 15703360 | 0.0 | 110.566505 | 9 |
| AGTGGTA | 15703255 | 0.0 | 110.557495 | 5 |
| GGTATCA | 15730450 | 0.0 | 110.28988 | 8 |
| TGGTATC | 15752275 | 0.0 | 110.130775 | 7 |
| GTGGTAT | 15773465 | 0.0 | 110.01185 | 6 |
| CAGTGGT | 15782070 | 0.0 | 110.0052 | 4 |
| GCAGTGG | 16036100 | 0.0 | 108.25264 | 3 |
| CATGGGG | 2988725 | 0.0 | 25.560644 | 25-29 |
| CATGGGT | 1539635 | 0.0 | 24.966026 | 25-29 |
| CATGGGC | 1962745 | 0.0 | 24.78221 | 25-29 |
| ATGGGAT | 1827090 | 0.0 | 24.458782 | 25-29 |
| ATGGGAC | 916830 | 0.0 | 24.41253 | 25-29 |
| ATGGGGG | 1008785 | 0.0 | 23.993374 | 25-29 |
| ATGGGCG | 316755 | 0.0 | 23.848162 | 25-29 |
| ATGGGAG | 1959060 | 0.0 | 23.63527 | 25-29 |
| ATGGGGT | 676305 | 0.0 | 23.618967 | 25-29 |
| ACATGGG | 14460330 | 0.0 | 23.426052 | 20-24 |
| TAGCGAG | 154720 | 0.0 | 23.25686 | 130-134 |