Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026857_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 157101620 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 46 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 507357 | 0.3229482929584049 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 422798 | 0.2691238957306742 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 200348 | 0.12752764739154185 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGATA | 165173 | 0.10513768094816592 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATAGCGA | 1080615 | 0.0 | 142.19197 | 1 |
| TAGCGAC | 1082640 | 0.0 | 141.76866 | 2 |
| AGGCTAA | 807540 | 0.0 | 140.29971 | 1 |
| GGCTAAC | 811005 | 0.0 | 139.61049 | 2 |
| ACGCTTA | 437745 | 0.0 | 138.90266 | 2 |
| ACTTCGA | 398130 | 0.0 | 138.58516 | 2 |
| ACCTTAC | 750305 | 0.0 | 137.6623 | 2 |
| TATCAGC | 339815 | 0.0 | 137.1245 | 1 |
| ATGCCTA | 256360 | 0.0 | 137.01219 | 1 |
| GCTAACT | 305530 | 0.0 | 136.95871 | 3 |
| AGCGACT | 405995 | 0.0 | 136.3312 | 3 |
| CACCTTA | 760650 | 0.0 | 135.60822 | 1 |
| ATCAGCA | 341725 | 0.0 | 135.27301 | 2 |
| GATAGAC | 236130 | 0.0 | 134.97078 | 1 |
| CACTTCG | 413740 | 0.0 | 133.87143 | 1 |
| ATCATTC | 460915 | 0.0 | 133.59969 | 1 |
| GCCATGC | 459360 | 0.0 | 133.43822 | 2 |
| CATTGGC | 442445 | 0.0 | 133.42592 | 2 |
| AGCCATG | 460375 | 0.0 | 133.41238 | 1 |
| CAGATTC | 326470 | 0.0 | 132.50996 | 2 |