Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026849_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 219289944 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 408376 | 0.18622650567141374 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 328781 | 0.14992981164699465 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGGACTCTGCGTTGAT | 235619 | 0.10744633141955658 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGCTTA | 878770 | 0.0 | 139.87836 | 2 |
| ACGTGAT | 530975 | 0.0 | 134.72441 | 2 |
| AACGTGA | 523210 | 0.0 | 133.85448 | 1 |
| AGAGATC | 985320 | 0.0 | 132.89934 | 2 |
| AACGCTT | 931355 | 0.0 | 132.42021 | 1 |
| ATGCCTA | 256980 | 0.0 | 131.83109 | 1 |
| ATGCGTC | 313735 | 0.0 | 131.642 | 3 |
| GCTGATC | 481815 | 0.0 | 131.63615 | 2 |
| AATGCGT | 657465 | 0.0 | 131.23866 | 2 |
| TAGCGAC | 286275 | 0.0 | 131.1862 | 2 |
| TATCAGC | 383285 | 0.0 | 130.63528 | 1 |
| CGCTTAA | 274285 | 0.0 | 130.60152 | 3 |
| ATAGCGA | 285480 | 0.0 | 130.40126 | 1 |
| CGCTTAT | 323045 | 0.0 | 129.85518 | 3 |
| ATCATTC | 513550 | 0.0 | 129.59265 | 1 |
| GAATGCG | 680535 | 0.0 | 129.5504 | 1 |
| CGCTTAG | 317840 | 0.0 | 128.68387 | 3 |
| AGCAGGA | 1821820 | 0.0 | 128.61044 | 1 |
| GCAGGAA | 1824070 | 0.0 | 128.31685 | 2 |
| CTGATCG | 185500 | 0.0 | 127.54045 | 3 |