Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026861_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 203514392 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 23969700 | 11.777889398603318 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 7318725 | 3.5961707317485434 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 971737 | 0.477478270922481 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 556736 | 0.27356099710137455 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 496303 | 0.24386629128420556 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 405961 | 0.19947532752376548 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 363533 | 0.1786276618707143 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCAC | 350446 | 0.17219715842012787 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 268289 | 0.13182802324859658 | No Hit |
| AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA | 268067 | 0.1317189400541265 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAAGCAGTGGTATCAACGCAG | 247586 | 0.12165527831564855 | No Hit |
| AGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTG | 211897 | 0.10411892639022796 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 23421500 | 0.0 | 65.14188 | 1 |
| AGTGGTA | 23820080 | 0.0 | 64.016815 | 5 |
| GTATCAA | 23848945 | 0.0 | 63.9517 | 9 |
| AGCAGTG | 23964630 | 0.0 | 63.642128 | 2 |
| CAGTGGT | 23969865 | 0.0 | 63.62554 | 4 |
| GGTATCA | 23965005 | 0.0 | 63.59997 | 8 |
| TGGTATC | 24000180 | 0.0 | 63.479996 | 7 |
| GTGGTAT | 24006520 | 0.0 | 63.470158 | 6 |
| GCAGTGG | 24393655 | 0.0 | 62.507084 | 3 |
| CATGGGG | 2491750 | 0.0 | 23.11096 | 25-29 |
| TAGCGAG | 107795 | 0.0 | 22.989012 | 130-134 |
| AAACCGC | 226780 | 0.0 | 22.469343 | 85-89 |
| ATGGGGG | 901025 | 0.0 | 22.433142 | 25-29 |
| GAAACCG | 233565 | 0.0 | 22.029701 | 85-89 |
| ATGGGGC | 528795 | 0.0 | 21.989 | 25-29 |
| ATGGGGT | 483745 | 0.0 | 21.53162 | 25-29 |
| ATAGCGA | 113645 | 0.0 | 21.265043 | 130-134 |
| CCCGTTC | 115055 | 0.0 | 20.987078 | 140-144 |
| ATGGGAT | 1385745 | 0.0 | 20.438002 | 25-29 |
| CCGTTCT | 121475 | 0.0 | 20.423782 | 140-144 |