Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026841_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 184156353 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 4057128 | 2.2030888068249266 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1296083 | 0.7037948889007375 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 1111619 | 0.6036278314004188 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 606250 | 0.3292039563793925 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 552763 | 0.3001596149115746 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 457708 | 0.2485431496354622 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC | 434713 | 0.23605647750854405 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 433437 | 0.23536358802674595 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACACTCGCTTCTGGAACG | 204211 | 0.11089001094629627 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 187153 | 0.1016272297703463 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 11803615 | 0.0 | 118.585205 | 1 |
| GGTATCA | 12019905 | 0.0 | 116.25801 | 8 |
| GTATCAA | 12025840 | 0.0 | 116.24951 | 9 |
| GTGGTAT | 12032305 | 0.0 | 116.11396 | 6 |
| TGGTATC | 12045105 | 0.0 | 116.00437 | 7 |
| AGTGGTA | 12054505 | 0.0 | 115.94683 | 5 |
| AGCAGTG | 12080325 | 0.0 | 115.84205 | 2 |
| CAGTGGT | 12094240 | 0.0 | 115.70086 | 4 |
| GCAGTGG | 12458305 | 0.0 | 112.29726 | 3 |
| CATGGGG | 3106060 | 0.0 | 26.269707 | 25-29 |
| ATGGGGG | 1168090 | 0.0 | 25.208136 | 25-29 |
| ATGGGAC | 775780 | 0.0 | 24.612844 | 25-29 |
| CATGGGC | 1520700 | 0.0 | 24.530928 | 25-29 |
| ACATGGG | 11241980 | 0.0 | 24.446264 | 20-24 |
| TACATGG | 11846410 | 0.0 | 23.949097 | 20-24 |
| AGTACAT | 11876825 | 0.0 | 23.928116 | 20-24 |
| AGAGTAC | 11921265 | 0.0 | 23.919643 | 15-19 |
| GTACATG | 11882310 | 0.0 | 23.90597 | 20-24 |
| ATGGGGT | 633025 | 0.0 | 23.886284 | 25-29 |
| CAGAGTA | 11950890 | 0.0 | 23.862974 | 15-19 |