Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026883_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 191415812 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 1580928 | 0.8259129606283518 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 494519 | 0.25834804075642404 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 276459 | 0.14442850729593856 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 263944 | 0.13789038493852326 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 247970 | 0.12954520183525903 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCAC | 245517 | 0.12826369850783276 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 226617 | 0.11838990605436503 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT | 223781 | 0.11690831476346374 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 213498 | 0.11153624027674369 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 13546875 | 0.0 | 135.67305 | 1 |
| TGGTATC | 13776010 | 0.0 | 133.36322 | 7 |
| GGTATCA | 13793175 | 0.0 | 133.24016 | 8 |
| GTGGTAT | 13791870 | 0.0 | 133.17938 | 6 |
| GTATCAA | 13817075 | 0.0 | 132.99478 | 9 |
| AGTGGTA | 13819065 | 0.0 | 132.95735 | 5 |
| AGCAGTG | 13835300 | 0.0 | 132.82706 | 2 |
| CAGTGGT | 13851120 | 0.0 | 132.67357 | 4 |
| GCAGTGG | 14123915 | 0.0 | 130.10222 | 3 |
| CAACGCA | 13745560 | 0.0 | 27.305857 | 10-14 |
| TCAACGC | 13763270 | 0.0 | 27.236563 | 10-14 |
| ATCAACG | 13755765 | 0.0 | 27.231125 | 10-14 |
| AACGCAG | 13827665 | 0.0 | 27.137037 | 10-14 |
| CGCAGAG | 13792055 | 0.0 | 27.129395 | 15-19 |
| AGAGTAC | 13754000 | 0.0 | 27.12799 | 15-19 |
| ACATGGG | 13536045 | 0.0 | 27.08512 | 20-24 |
| TACATGG | 13755200 | 0.0 | 27.070673 | 20-24 |
| CAGAGTA | 13827955 | 0.0 | 27.052092 | 15-19 |
| GTACATG | 13774950 | 0.0 | 27.045828 | 20-24 |
| GCAGAGT | 13816635 | 0.0 | 27.040613 | 15-19 |