Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026877_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 187397518 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 1959335 | 1.0455501337002766 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 620674 | 0.3312071614523731 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 334333 | 0.17840844615668816 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 303877 | 0.16215636324489632 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 278282 | 0.14849823144402585 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 190993 | 0.1019186390718366 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT | 188810 | 0.10075373570315908 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 13409700 | 0.0 | 134.646 | 1 |
| TGGTATC | 13664905 | 0.0 | 131.99289 | 7 |
| GTGGTAT | 13680295 | 0.0 | 131.84645 | 6 |
| AGTGGTA | 13690440 | 0.0 | 131.77893 | 5 |
| GGTATCA | 13697230 | 0.0 | 131.69662 | 8 |
| CAGTGGT | 13716280 | 0.0 | 131.55371 | 4 |
| AGCAGTG | 13719390 | 0.0 | 131.54056 | 2 |
| GTATCAA | 13730560 | 0.0 | 131.43686 | 9 |
| GCAGTGG | 13986120 | 0.0 | 128.99498 | 3 |
| CAACGCA | 13650215 | 0.0 | 26.952751 | 10-14 |
| TCAACGC | 13667555 | 0.0 | 26.887646 | 10-14 |
| ATCAACG | 13665270 | 0.0 | 26.869926 | 10-14 |
| AGAGTAC | 13679720 | 0.0 | 26.83992 | 15-19 |
| AACGCAG | 13719470 | 0.0 | 26.809504 | 10-14 |
| ACATGGG | 13295895 | 0.0 | 26.797482 | 20-24 |
| CGCAGAG | 13695650 | 0.0 | 26.796875 | 15-19 |
| CAGAGTA | 13728715 | 0.0 | 26.756584 | 15-19 |
| GCAGAGT | 13711200 | 0.0 | 26.753513 | 15-19 |
| TACATGG | 13672570 | 0.0 | 26.735222 | 20-24 |
| GTACATG | 13695700 | 0.0 | 26.718174 | 20-24 |