Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026873_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 202051976 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 343065 | 0.16979047015110607 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 214680 | 0.10624988888997552 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATCATTC | 1723135 | 0.0 | 139.50447 | 1 |
| ATAGCGA | 621100 | 0.0 | 138.26035 | 1 |
| TAGCGAC | 581600 | 0.0 | 138.05493 | 2 |
| TCATTCC | 1607975 | 0.0 | 137.29956 | 2 |
| CATTCCG | 506270 | 0.0 | 136.1074 | 3 |
| ACGCTTA | 440965 | 0.0 | 136.07858 | 2 |
| AGAGTCA | 689760 | 0.0 | 134.98311 | 1 |
| AGTGGTC | 971055 | 0.0 | 134.77855 | 1 |
| GTGGTCA | 889780 | 0.0 | 134.43462 | 2 |
| GAGTCAA | 622270 | 0.0 | 133.78058 | 2 |
| CGAGTAA | 415560 | 0.0 | 131.47238 | 2 |
| GCGAGTA | 478120 | 0.0 | 130.94469 | 1 |
| CATTCCT | 639525 | 0.0 | 127.58889 | 3 |
| GTCGTAG | 254170 | 0.0 | 127.0468 | 1 |
| CATTGGC | 359445 | 0.0 | 126.850365 | 2 |
| AACTCAC | 483470 | 0.0 | 125.605774 | 1 |
| TACCGTC | 131965 | 0.0 | 125.525085 | 3 |
| CCACTGT | 630060 | 0.0 | 125.01517 | 2 |
| TCGTAGA | 221640 | 0.0 | 124.03868 | 2 |
| TGGTCAG | 371125 | 0.0 | 123.527725 | 3 |