Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026876_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 148137730 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150-151 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 6333331 | 4.275299074719182 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 882281 | 0.5955815577840973 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 254713 | 0.1719433664873898 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 207433 | 0.14002712205729087 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 7743740 | 0.0 | 79.768845 | 1 |
| AGTGGTA | 7873250 | 0.0 | 78.87988 | 5 |
| GTGGTAT | 7883565 | 0.0 | 78.74659 | 6 |
| GTATCAA | 7889600 | 0.0 | 78.696526 | 9 |
| TGGTATC | 7856415 | 0.0 | 78.69068 | 7 |
| GGTATCA | 7863925 | 0.0 | 78.62969 | 8 |
| CAGTGGT | 7901390 | 0.0 | 78.49584 | 4 |
| AGCAGTG | 7857930 | 0.0 | 78.43356 | 2 |
| GCAGTGG | 8070230 | 0.0 | 76.80711 | 3 |
| ACGCAGT | 108490 | 0.0 | 39.380367 | 1 |
| GGTATAA | 97010 | 0.0 | 30.1916 | 8 |
| TGGTATA | 109940 | 0.0 | 26.73287 | 7 |
| CGTGGGA | 68020 | 0.0 | 24.930628 | 145 |
| CGCAGTG | 183565 | 0.0 | 23.546005 | 2 |
| ATGGGAT | 793955 | 0.0 | 22.466482 | 25-29 |
| CATGGGG | 898040 | 0.0 | 22.016506 | 25-29 |
| CCGCAAG | 44240 | 0.0 | 21.83465 | 145 |
| ATGGGAC | 390635 | 0.0 | 21.221094 | 25-29 |
| ATGGGCG | 99980 | 0.0 | 20.720083 | 25-29 |
| CATGGGC | 659985 | 0.0 | 20.624538 | 25-29 |