Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026884_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 205533782 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 9330856 | 4.539816233226322 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 2352342 | 1.144503826626418 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 643518 | 0.31309597562896013 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGCCGGGCGCGGTGGCTCACG | 293392 | 0.14274636370968935 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGATCAAGTGAATAAGTGCA | 284778 | 0.13855532517763916 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 280399 | 0.13642477517394197 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGCCGGGCGCGGTGGCTCAC | 229556 | 0.11168772245917218 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 229399 | 0.11161133598952605 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 17354780 | 0.0 | 109.30931 | 1 |
| AGCAGTG | 17753120 | 0.0 | 106.839485 | 2 |
| AGTGGTA | 17765225 | 0.0 | 106.77702 | 5 |
| GTATCAA | 17797130 | 0.0 | 106.6432 | 9 |
| TGGTATC | 17820880 | 0.0 | 106.402504 | 7 |
| GGTATCA | 17828725 | 0.0 | 106.393326 | 8 |
| CAGTGGT | 17830260 | 0.0 | 106.38356 | 4 |
| GTGGTAT | 17838090 | 0.0 | 106.30287 | 6 |
| GCAGTGG | 18125140 | 0.0 | 104.62988 | 3 |
| CATGGGG | 2805850 | 0.0 | 25.26387 | 25-29 |
| ATGGGAT | 2518720 | 0.0 | 25.23688 | 25-29 |
| ATGGGAC | 1136150 | 0.0 | 24.836966 | 25-29 |
| CATGGGC | 1879965 | 0.0 | 24.443995 | 25-29 |
| ATGGGAG | 2391355 | 0.0 | 24.259806 | 25-29 |
| ATGGGGG | 968280 | 0.0 | 23.895521 | 25-29 |
| ATGGGCG | 303480 | 0.0 | 23.814571 | 25-29 |
| ATGGGGT | 668565 | 0.0 | 23.527826 | 25-29 |
| CATGGGT | 1151945 | 0.0 | 23.241995 | 25-29 |
| ATGGGCT | 655270 | 0.0 | 22.75787 | 25-29 |
| ACATGGG | 16390605 | 0.0 | 22.607311 | 20-24 |