Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026834_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 188671843 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150-151 |
| %GC | 54 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 241172 | 0.12782617488927586 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CATCGGG | 1025300 | 0.0 | 137.73396 | 2 |
| ACATCGG | 1057215 | 0.0 | 137.29411 | 1 |
| ATGCCTA | 268970 | 0.0 | 135.83456 | 1 |
| ATCGGGC | 512780 | 0.0 | 135.458 | 3 |
| CTGGCAT | 383165 | 0.0 | 135.39505 | 1 |
| GACTAGT | 345430 | 0.0 | 135.36923 | 1 |
| AGGCTAA | 394725 | 0.0 | 134.4565 | 1 |
| GGCTAAC | 367760 | 0.0 | 134.3757 | 2 |
| TGGCATA | 358295 | 0.0 | 132.69412 | 2 |
| TGCCTAA | 249690 | 0.0 | 131.89954 | 2 |
| ACTAGTA | 325920 | 0.0 | 131.36656 | 2 |
| CGAACTT | 205300 | 0.0 | 131.35025 | 1 |
| ATCATTC | 336925 | 0.0 | 130.0675 | 1 |
| CATCGGT | 304295 | 0.0 | 128.7684 | 2 |
| ATCGGTC | 148970 | 0.0 | 126.83928 | 3 |
| AGTGGTC | 380230 | 0.0 | 126.73834 | 1 |
| GCTAACT | 139375 | 0.0 | 126.55016 | 3 |
| ATGAATC | 291785 | 0.0 | 126.43073 | 2 |
| GTGGTCA | 349660 | 0.0 | 124.630646 | 2 |
| AGTTAGC | 142580 | 0.0 | 124.24778 | 2 |