Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026850_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 224998146 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 43 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 5088974 | 2.261784859329463 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1541674 | 0.6851940904437497 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 805801 | 0.3581367288244233 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 668696 | 0.29720067115575255 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 312312 | 0.1388064770987046 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 15880110 | 0.0 | 119.40278 | 1 |
| GGTATCA | 16009560 | 0.0 | 117.51305 | 8 |
| GTATCAA | 16073900 | 0.0 | 117.49459 | 9 |
| TGGTATC | 16039740 | 0.0 | 117.34615 | 7 |
| GTGGTAT | 16116600 | 0.0 | 117.2923 | 6 |
| AGTGGTA | 16127840 | 0.0 | 117.27601 | 5 |
| AGCAGTG | 16117685 | 0.0 | 117.23875 | 2 |
| CAGTGGT | 16164500 | 0.0 | 116.944305 | 4 |
| GCAGTGG | 16479905 | 0.0 | 114.66724 | 3 |
| GGTATAA | 176945 | 0.0 | 48.96402 | 8 |
| TGGTATA | 192055 | 0.0 | 45.142853 | 7 |
| TTGTATC | 206520 | 0.0 | 37.340054 | 7 |
| GTTGTAT | 208685 | 0.0 | 36.969925 | 6 |
| GCAGTTG | 212415 | 0.0 | 36.267513 | 3 |
| TGTATCA | 226840 | 0.0 | 34.01727 | 8 |
| CAGTTGT | 235135 | 0.0 | 32.894894 | 4 |
| GTATCGA | 48430 | 0.0 | 30.237244 | 9 |
| GTATAAA | 296915 | 0.0 | 29.366594 | 9 |
| GGTATCG | 50110 | 0.0 | 29.180372 | 8 |
| AGCAGTT | 284150 | 0.0 | 27.261292 | 2 |