Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026857_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 157101620 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 7313096 | 4.655009922876671 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1901470 | 1.2103439799029443 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 522653 | 0.33268466614157133 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT | 245865 | 0.1565006140611408 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 233027 | 0.148328833273648 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 209907 | 0.13361224410034728 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAA | 175713 | 0.11184671424775887 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 160907 | 0.10242224109464945 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 13190200 | 0.0 | 104.501755 | 1 |
| GTATCAA | 13480045 | 0.0 | 102.21826 | 9 |
| AGTGGTA | 13473935 | 0.0 | 102.15698 | 5 |
| GGTATCA | 13493855 | 0.0 | 101.92944 | 8 |
| AGCAGTG | 13517915 | 0.0 | 101.80652 | 2 |
| TGGTATC | 13512915 | 0.0 | 101.71679 | 7 |
| GTGGTAT | 13532275 | 0.0 | 101.65996 | 6 |
| CAGTGGT | 13565880 | 0.0 | 101.47279 | 4 |
| GCAGTGG | 13808000 | 0.0 | 99.66187 | 3 |
| ATGGGAT | 1679370 | 0.0 | 25.246822 | 25-29 |
| CATGGGG | 2042410 | 0.0 | 24.729021 | 25-29 |
| ATGGGAC | 858600 | 0.0 | 24.577682 | 25-29 |
| ATGGGAG | 1905065 | 0.0 | 24.353895 | 25-29 |
| TTGTATC | 111110 | 0.0 | 23.553694 | 7 |
| CATGGGC | 1229565 | 0.0 | 23.3623 | 25-29 |
| CATGGGT | 904670 | 0.0 | 23.335463 | 25-29 |
| ATGGGGG | 687120 | 0.0 | 23.196672 | 25-29 |
| GTTGTAT | 113990 | 0.0 | 22.958601 | 6 |
| ATGGGGT | 430805 | 0.0 | 22.707619 | 25-29 |
| ATGGGCG | 182510 | 0.0 | 22.327791 | 25-29 |