Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026844_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 182682393 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 35 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 322696 | 0.17664318640713228 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTCGTAG | 1536515 | 0.0 | 142.16354 | 1 |
| TCGTAGA | 1373590 | 0.0 | 141.17834 | 2 |
| ACGTATC | 419625 | 0.0 | 138.2621 | 1 |
| GTTACCG | 653420 | 0.0 | 136.1092 | 1 |
| ATGCCTA | 351665 | 0.0 | 135.826 | 1 |
| ACGTGAT | 459365 | 0.0 | 135.11267 | 2 |
| ACTTCGA | 274370 | 0.0 | 134.87782 | 2 |
| CGTAGAG | 460840 | 0.0 | 134.84328 | 3 |
| AACGTGA | 471525 | 0.0 | 134.05125 | 1 |
| GATAGAC | 310820 | 0.0 | 133.92136 | 1 |
| ATCAGCA | 365965 | 0.0 | 133.53856 | 2 |
| TATCAGC | 407310 | 0.0 | 133.10522 | 1 |
| TACCGTC | 165200 | 0.0 | 132.40933 | 3 |
| CACTTCG | 308380 | 0.0 | 132.07727 | 1 |
| CTGGCAT | 313305 | 0.0 | 132.00081 | 1 |
| TGCCTAA | 333625 | 0.0 | 131.8305 | 2 |
| GCGAGTA | 287035 | 0.0 | 131.7363 | 1 |
| CGTAGAT | 552815 | 0.0 | 131.70894 | 3 |
| CGTAGAA | 429785 | 0.0 | 131.28188 | 3 |
| GCCACAT | 358645 | 0.0 | 129.9641 | 1 |