Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026852_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 158298575 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150-151 |
| %GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 362996 | 0.22931097137166268 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 243729 | 0.15396790527015167 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATGCCTA | 356760 | 0.0 | 138.86171 | 1 |
| TGCCTAA | 339540 | 0.0 | 136.4108 | 2 |
| ACGCTTA | 310875 | 0.0 | 136.10495 | 2 |
| CTCAATG | 223845 | 0.0 | 131.93779 | 1 |
| GCCTAAT | 147805 | 0.0 | 127.71389 | 3 |
| ATGAATC | 266845 | 0.0 | 126.90648 | 2 |
| AACGCTT | 361235 | 0.0 | 125.15788 | 1 |
| GCCACAT | 280805 | 0.0 | 124.63215 | 1 |
| CAGATTC | 165265 | 0.0 | 124.4381 | 2 |
| CGAACTT | 118715 | 0.0 | 124.40405 | 1 |
| ATAGCGA | 183650 | 0.0 | 123.03772 | 1 |
| CTGGCAT | 139290 | 0.0 | 122.52601 | 1 |
| CGTGATG | 464350 | 0.0 | 122.46841 | 1 |
| CAAGCTA | 167680 | 0.0 | 121.86854 | 2 |
| ACGTATC | 109750 | 0.0 | 121.75215 | 1 |
| TAGCGAC | 171020 | 0.0 | 121.03399 | 2 |
| TCAATGA | 219715 | 0.0 | 120.53696 | 2 |
| AGAGATC | 346340 | 0.0 | 120.2401 | 2 |
| GCCTAAG | 114650 | 0.0 | 120.0289 | 3 |
| CGCTTAA | 111955 | 0.0 | 119.43382 | 3 |