Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026862_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 200247135 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 3619626 | 1.807579419301055 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 2160999 | 1.0791660015510334 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC | 1285779 | 0.6420960779289052 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 1098283 | 0.5484637770223278 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 965707 | 0.48225758635697835 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 962821 | 0.4808163672354164 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 831513 | 0.41524339411897204 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 725542 | 0.36232328617335774 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACACTCGCTTCTGGAACG | 543928 | 0.2716283556316549 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACTCTTCTGGTCCCCACAG | 363930 | 0.18174042789675868 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGACACTCGCTTCTGGAACGT | 359297 | 0.17942678680521448 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTCTTGCTTCAAC | 249280 | 0.12448617554503338 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT | 213873 | 0.10680452431941162 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 10677145 | 0.0 | 120.2828 | 1 |
| GGTATCA | 10858690 | 0.0 | 118.112854 | 8 |
| GTGGTAT | 10870385 | 0.0 | 118.0731 | 6 |
| GTATCAA | 10879145 | 0.0 | 117.97434 | 9 |
| TGGTATC | 10896625 | 0.0 | 117.64427 | 7 |
| CAGTGGT | 10916165 | 0.0 | 117.620094 | 4 |
| AGCAGTG | 10917965 | 0.0 | 117.586945 | 2 |
| AGTGGTA | 10971475 | 0.0 | 117.028366 | 5 |
| GCAGTGG | 11249300 | 0.0 | 114.13439 | 3 |
| CATGGGG | 3026900 | 0.0 | 26.180922 | 25-29 |
| ACACTCG | 279660 | 0.0 | 25.757126 | 30-34 |
| ATGGGAC | 949210 | 0.0 | 25.176037 | 25-29 |
| CGCAGAT | 423195 | 0.0 | 25.00206 | 90-94 |
| ATGGGGG | 1150850 | 0.0 | 24.817678 | 25-29 |
| GAAACCG | 428470 | 0.0 | 24.582777 | 85-89 |
| ACATGGG | 10370965 | 0.0 | 24.551908 | 20-24 |
| TACATGG | 10717850 | 0.0 | 24.269938 | 20-24 |
| AGAGTAC | 10783035 | 0.0 | 24.257698 | 15-19 |
| GTACATG | 10762740 | 0.0 | 24.225285 | 20-24 |
| AGTACAT | 10772940 | 0.0 | 24.213 | 20-24 |