Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026869_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 182352349 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 49 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 1278276 | 0.7009923409322246 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCGCGTTGATAC | 497023 | 0.27256188512274115 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 361317 | 0.19814222409605484 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGATAC | 262339 | 0.14386378976670053 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGATA | 255800 | 0.1402778748959247 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 204344 | 0.11205997680896339 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCACGGACTCTGCGTTGAT | 199396 | 0.10934654864248555 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGGACTCTGCGTTGAT | 195601 | 0.10726541285190684 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCACGGACTCTGCGTTGATA | 185913 | 0.10195262140549667 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 184941 | 0.10141958741644727 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATAGAC | 2100140 | 0.0 | 141.35109 | 1 |
| ATGCCTA | 864065 | 0.0 | 139.64024 | 1 |
| ATAGACA | 1904875 | 0.0 | 139.55159 | 2 |
| TGCCTAA | 779580 | 0.0 | 137.49176 | 2 |
| TAGACAT | 693295 | 0.0 | 135.96852 | 3 |
| GATCTGG | 1798100 | 0.0 | 135.60359 | 1 |
| GCCTAAT | 325300 | 0.0 | 132.82092 | 3 |
| ATCTGGG | 1474485 | 0.0 | 132.34103 | 2 |
| TAGACAG | 707360 | 0.0 | 130.0176 | 3 |
| TAGACAA | 600925 | 0.0 | 128.60252 | 3 |
| ATAGACG | 245975 | 0.0 | 127.98464 | 2 |
| GCCTAAG | 250010 | 0.0 | 126.45743 | 3 |
| ATCTGGT | 433385 | 0.0 | 122.81547 | 2 |
| GTCGTAG | 190095 | 0.0 | 122.66202 | 1 |
| TCTGGGC | 675195 | 0.0 | 122.65321 | 3 |
| AGTGGTC | 354250 | 0.0 | 121.39313 | 1 |
| ATAGCGA | 146270 | 0.0 | 120.12236 | 1 |
| CGCATAC | 405595 | 0.0 | 118.69788 | 1 |
| AGCTGAA | 235470 | 0.0 | 117.556984 | 2 |
| TCGTAGA | 159355 | 0.0 | 117.29471 | 2 |