Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026840_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 180235456 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 47 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 252061 | 0.1398509514132447 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 247383 | 0.13725545766089442 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACTCTGCGTTGATA | 183576 | 0.10185343332224266 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGCATAC | 1139065 | 0.0 | 140.29254 | 1 |
| GCATACA | 1137145 | 0.0 | 139.45193 | 2 |
| ATAGCGA | 260875 | 0.0 | 136.00577 | 1 |
| TAGCGAC | 264470 | 0.0 | 134.51509 | 2 |
| GCTGATC | 390490 | 0.0 | 134.33893 | 2 |
| AGGCTAA | 340180 | 0.0 | 133.95712 | 1 |
| GTGCGAA | 395845 | 0.0 | 133.48793 | 2 |
| GGCTAAC | 343245 | 0.0 | 133.38908 | 2 |
| GGCTTCA | 706355 | 0.0 | 133.2766 | 2 |
| ATCATTC | 551670 | 0.0 | 132.40329 | 1 |
| CAGATTC | 693805 | 0.0 | 132.1582 | 2 |
| CATACAG | 393115 | 0.0 | 131.97224 | 3 |
| AGATTCG | 230365 | 0.0 | 131.0942 | 3 |
| CCTAATC | 433245 | 0.0 | 130.75006 | 1 |
| ACAGATT | 701305 | 0.0 | 130.62134 | 1 |
| CTAATCC | 431890 | 0.0 | 130.3718 | 2 |
| CATACAT | 450370 | 0.0 | 129.82721 | 3 |
| TGGCATA | 271540 | 0.0 | 129.51915 | 2 |
| ATGCCTA | 136450 | 0.0 | 128.35693 | 1 |
| ACGCTTA | 152760 | 0.0 | 127.25001 | 2 |