Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026839_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 228698586 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 2434719 | 1.0645973123769117 | No Hit |
| CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 851763 | 0.37243911949678604 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCCGCGTTGATAC | 826067 | 0.36120337009866776 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACT | 785649 | 0.34353032685562823 | No Hit |
| ACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCACGTACT | 597134 | 0.26110087099532836 | No Hit |
| AACAACCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT | 479242 | 0.20955179845318328 | No Hit |
| CATGTACTCTGCGTTGATACCACTGCTTCGCATGTACTCTGCGTTGATAC | 397840 | 0.1739582246477029 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 297930 | 0.13027190294915073 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAGGGAC | 1794935 | 0.0 | 140.11304 | 5 |
| GAGTAGG | 3520905 | 0.0 | 138.47472 | 2 |
| TAGGGCC | 1107855 | 0.0 | 138.1779 | 5 |
| AGTAGGG | 2936390 | 0.0 | 137.53784 | 3 |
| AGGGCCT | 1253035 | 0.0 | 135.6254 | 6 |
| AGAGTAG | 4133670 | 0.0 | 134.79106 | 1 |
| GATAGAC | 632840 | 0.0 | 134.26608 | 1 |
| GGGACTG | 866710 | 0.0 | 131.89133 | 7 |
| TAGTGAC | 344845 | 0.0 | 131.55807 | 5 |
| GAGTAGT | 686340 | 0.0 | 130.55852 | 2 |
| ATAGACA | 623620 | 0.0 | 130.33295 | 2 |
| ATGCCTA | 265285 | 0.0 | 128.91762 | 1 |
| TGCCTAA | 252345 | 0.0 | 126.24129 | 2 |
| AGTGACT | 364755 | 0.0 | 126.240326 | 6 |
| AGTAGTG | 575450 | 0.0 | 125.391685 | 3 |
| TCACGCA | 345220 | 0.0 | 125.349174 | 2 |
| GGGCCTC | 831260 | 0.0 | 124.89737 | 7 |
| AGGGACT | 2219875 | 0.0 | 122.671715 | 6 |
| GTAGGGC | 1227565 | 0.0 | 122.29824 | 4 |
| TAGACAT | 240620 | 0.0 | 122.24725 | 3 |