Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026859_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 154519082 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 2661347 | 1.722341969388609 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 1087694 | 0.703922121411516 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1066999 | 0.690528953569631 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 504735 | 0.3266489765969487 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGATAAACTTCGCCTTAATTTT | 221072 | 0.14307100271279116 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 185190 | 0.1198492753147472 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 10495715 | 0.0 | 123.3215 | 1 |
| GTATCAA | 10709115 | 0.0 | 120.87138 | 9 |
| GGTATCA | 10697615 | 0.0 | 120.87001 | 8 |
| TGGTATC | 10698625 | 0.0 | 120.799446 | 7 |
| GTGGTAT | 10709715 | 0.0 | 120.70682 | 6 |
| AGTGGTA | 10728840 | 0.0 | 120.53292 | 5 |
| AGCAGTG | 10730340 | 0.0 | 120.51169 | 2 |
| CAGTGGT | 10766080 | 0.0 | 120.12791 | 4 |
| GCAGTGG | 10976005 | 0.0 | 117.794556 | 3 |
| CATGGGG | 2093030 | 0.0 | 25.912748 | 25-29 |
| ATGGGAT | 1646200 | 0.0 | 25.590601 | 25-29 |
| ACATGGG | 10041165 | 0.0 | 25.401386 | 20-24 |
| ATGGGAG | 1734945 | 0.0 | 25.128252 | 25-29 |
| CATGGGC | 1311285 | 0.0 | 24.951164 | 25-29 |
| CATGGGT | 905185 | 0.0 | 24.940119 | 25-29 |
| TACATGG | 10570345 | 0.0 | 24.814426 | 20-24 |
| ATGGGAC | 760525 | 0.0 | 24.80009 | 25-29 |
| AGAGTAC | 10639170 | 0.0 | 24.797205 | 15-19 |
| GTACATG | 10607655 | 0.0 | 24.775312 | 20-24 |
| AGTACAT | 10621730 | 0.0 | 24.762165 | 20-24 |