Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026856_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 234062546 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 42 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 699837 | 0.2989957222801464 | No Hit |
| CCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATA | 278958 | 0.11918096456149802 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGAACTT | 794935 | 0.0 | 137.3128 | 1 |
| CTCGGTA | 547145 | 0.0 | 135.95651 | 2 |
| CCGAAGT | 689750 | 0.0 | 135.93384 | 1 |
| CGCATAC | 533305 | 0.0 | 135.32114 | 1 |
| ACTTCGA | 371190 | 0.0 | 134.61256 | 2 |
| CGAAGTA | 644750 | 0.0 | 133.6868 | 2 |
| GTCACTA | 386490 | 0.0 | 133.00206 | 2 |
| GAACTTA | 758795 | 0.0 | 132.48521 | 2 |
| CACTTCG | 428695 | 0.0 | 131.25656 | 1 |
| AGTCACT | 426020 | 0.0 | 131.21034 | 1 |
| TCCTGTA | 518485 | 0.0 | 129.82527 | 2 |
| GGCTAAC | 379870 | 0.0 | 129.35318 | 2 |
| CCGTGAG | 449985 | 0.0 | 128.23218 | 1 |
| GCTCGGT | 656180 | 0.0 | 128.01035 | 1 |
| ACGCTTA | 187965 | 0.0 | 127.53721 | 2 |
| ATCCTGT | 583885 | 0.0 | 127.1193 | 1 |
| CGACTGG | 505900 | 0.0 | 126.50807 | 1 |
| AGGCTAA | 415100 | 0.0 | 126.169815 | 1 |
| CAAGACT | 390550 | 0.0 | 125.92649 | 1 |
| GCATACA | 529525 | 0.0 | 125.68813 | 2 |