Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026865_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 231553101 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 21637024 | 9.344303274953765 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 6787804 | 2.931424356091867 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 1106142 | 0.47770554366274715 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 523444 | 0.2260578665279892 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 519453 | 0.22433428779690584 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 292010 | 0.12610930224596734 | No Hit |
| AGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTA | 264722 | 0.11432453241038651 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAAGCAGTGGTATCAACGCAG | 245837 | 0.10616873578384943 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 24501620 | 0.0 | 75.38725 | 1 |
| AGTGGTA | 25023220 | 0.0 | 73.78995 | 5 |
| AGCAGTG | 25062000 | 0.0 | 73.687096 | 2 |
| CAGTGGT | 25101595 | 0.0 | 73.56746 | 4 |
| GTATCAA | 25170580 | 0.0 | 73.383 | 9 |
| TGGTATC | 25156380 | 0.0 | 73.33932 | 7 |
| GTGGTAT | 25169800 | 0.0 | 73.30325 | 6 |
| GGTATCA | 25212325 | 0.0 | 73.21977 | 8 |
| GCAGTGG | 25534385 | 0.0 | 72.30851 | 3 |
| CATGGGG | 2904675 | 0.0 | 23.265966 | 25-29 |
| ATGGGAT | 1924750 | 0.0 | 22.694803 | 25-29 |
| ATGGGGG | 974125 | 0.0 | 22.358007 | 25-29 |
| AAACCGC | 252710 | 0.0 | 22.078821 | 85-89 |
| ATGGGGC | 621940 | 0.0 | 21.94447 | 25-29 |
| ATGGGGT | 603815 | 0.0 | 21.921886 | 25-29 |
| ATGGGAC | 913160 | 0.0 | 21.908337 | 25-29 |
| CATGGGC | 1804530 | 0.0 | 21.776806 | 25-29 |
| CATGGGT | 1154190 | 0.0 | 21.592083 | 25-29 |
| GAAACCG | 262290 | 0.0 | 21.57183 | 85-89 |
| ATGGGCT | 621310 | 0.0 | 21.554174 | 25-29 |