Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026840_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 180235456 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 5060518 | 2.8077261335305743 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCAACCCATCTCTCCATCACG | 1692863 | 0.9392508208817694 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 1645782 | 0.9131288795918158 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 1269334 | 0.7042643152299622 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGATCAAGTGAATAAGTGCA | 953280 | 0.5289081411373354 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 914437 | 0.5073568876481218 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 867001 | 0.48103798178311824 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAATCTGGTTGATCCTGCCAG | 757653 | 0.4203684540293781 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 666716 | 0.3699138975185881 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACTCTTCTGGTCCCCACAGA | 545139 | 0.30245935627671394 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCCAAAAAGAAAGGAGTTCAA | 475339 | 0.26373223701334325 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTCAAGCTACAAAGGGCTAAT | 358105 | 0.1986873215445467 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGTGTGGGTGTTTGTGGTCAAG | 339437 | 0.1883297590458561 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGACACTCGCTTCTGGAACGTC | 275085 | 0.15262535247226827 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTCTTGCTTCAAC | 240275 | 0.13331172752158155 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGATCAAGTGAATAAGTGCAT | 235784 | 0.13081998693975064 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGCGTGTTTTTCGTGGTAATGG | 231599 | 0.12849802427331503 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 12072390 | 0.0 | 116.56705 | 1 |
| GTATCAA | 12384630 | 0.0 | 113.58866 | 9 |
| AGCAGTG | 12394770 | 0.0 | 113.496376 | 2 |
| GGTATCA | 12392175 | 0.0 | 113.483116 | 8 |
| GTGGTAT | 12394630 | 0.0 | 113.44048 | 6 |
| CAGTGGT | 12413870 | 0.0 | 113.31528 | 4 |
| AGTGGTA | 12428665 | 0.0 | 113.15752 | 5 |
| TGGTATC | 12427565 | 0.0 | 113.151024 | 7 |
| GCAGTGG | 12623205 | 0.0 | 111.4193 | 3 |
| CATGGGG | 3355335 | 0.0 | 26.417162 | 25-29 |
| ATGGGGG | 1391845 | 0.0 | 25.37417 | 25-29 |
| CATGGGC | 1605520 | 0.0 | 24.86597 | 25-29 |
| CGATTAC | 156400 | 0.0 | 24.632704 | 65-69 |
| ATGGGAC | 725270 | 0.0 | 24.49493 | 25-29 |
| CGCAGAT | 344815 | 0.0 | 24.357805 | 90-94 |
| ATGGGGT | 639705 | 0.0 | 24.35337 | 25-29 |
| GCGATTA | 161300 | 0.0 | 24.048656 | 65-69 |
| TCACGAT | 247865 | 0.0 | 23.879084 | 45-49 |
| ACATGGG | 11641525 | 0.0 | 23.863588 | 20-24 |
| ATGGGAG | 1438300 | 0.0 | 23.578945 | 25-29 |