Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026856_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 234062546 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG | 29306984 | 12.521005389730316 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGA | 3445628 | 1.4720971205704991 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCG | 963397 | 0.4115981033548187 | No Hit |
| AGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA | 659993 | 0.2819729218872976 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC | 495263 | 0.21159429753447181 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGAATTCTGGACATTAATTA | 324154 | 0.138490333263315 | No Hit |
| AAGCAGTGGTATCAACGCAGAGTACATGGGGGGAATTCTGGACATTAATT | 253601 | 0.10834753544892227 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGCAGT | 26949075 | 0.0 | 76.383606 | 1 |
| AGTGGTA | 27497430 | 0.0 | 74.84501 | 5 |
| AGCAGTG | 27524365 | 0.0 | 74.75659 | 2 |
| CAGTGGT | 27562655 | 0.0 | 74.661354 | 4 |
| GTATCAA | 27611205 | 0.0 | 74.56465 | 9 |
| GGTATCA | 27663460 | 0.0 | 74.37988 | 8 |
| TGGTATC | 27653335 | 0.0 | 74.377396 | 7 |
| GTGGTAT | 27664275 | 0.0 | 74.36324 | 6 |
| GCAGTGG | 27902410 | 0.0 | 73.74376 | 3 |
| ATGGGAT | 2332560 | 0.0 | 23.898617 | 25-29 |
| CATGGGG | 2729675 | 0.0 | 23.666529 | 25-29 |
| ATGGGAG | 2905505 | 0.0 | 23.376053 | 25-29 |
| ATGGGGG | 961310 | 0.0 | 23.363443 | 25-29 |
| ATGGGAC | 1176920 | 0.0 | 22.864916 | 25-29 |
| ATGGGGT | 567720 | 0.0 | 21.941023 | 25-29 |
| AAACCGC | 228420 | 0.0 | 21.643398 | 85-89 |
| ATGGGGC | 564710 | 0.0 | 21.513323 | 25-29 |
| GAAACCG | 237120 | 0.0 | 21.169325 | 85-89 |
| CATGGGT | 1095640 | 0.0 | 21.115234 | 25-29 |
| TGGGATG | 754305 | 0.0 | 20.83267 | 25-29 |