Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR6026866_2.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 224472747 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 150 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC | 243871 | 0.10864169626792156 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCTAATC | 522710 | 0.0 | 133.67772 | 1 |
| AGTTAGC | 429365 | 0.0 | 131.87994 | 2 |
| AGAGTAG | 2056320 | 0.0 | 131.58772 | 1 |
| CTAATCC | 466055 | 0.0 | 130.4509 | 2 |
| AGTAGGC | 516995 | 0.0 | 129.58319 | 3 |
| CAGATTC | 529560 | 0.0 | 128.98509 | 2 |
| GTCGTAG | 392105 | 0.0 | 128.73901 | 1 |
| ATAGCGA | 321315 | 0.0 | 128.65677 | 1 |
| CTCTATC | 562160 | 0.0 | 128.5256 | 2 |
| ACGTATC | 245890 | 0.0 | 128.28215 | 1 |
| TATCAGC | 358250 | 0.0 | 128.18391 | 1 |
| AGTAGTC | 343580 | 0.0 | 127.45848 | 3 |
| TAGCGAC | 289620 | 0.0 | 127.22774 | 2 |
| TCGTAGA | 342330 | 0.0 | 127.13277 | 2 |
| CCTCTAT | 635715 | 0.0 | 126.73979 | 1 |
| GAGTAGG | 1342825 | 0.0 | 126.51828 | 2 |
| TCTATCG | 213970 | 0.0 | 124.29831 | 3 |
| CGAACTT | 252560 | 0.0 | 123.91318 | 1 |
| TAGGGAC | 436445 | 0.0 | 123.60322 | 5 |
| GAGTAGT | 910365 | 0.0 | 123.089485 | 2 |