Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391338.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 960868 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GGGCCGT | 25 | 0.0021135379 | 35.977062 | 26 |
| GATCGGA | 110 | 0.0 | 32.711525 | 18 |
| TCGGAAG | 120 | 0.0 | 29.985569 | 20 |
| ATCGGAA | 120 | 0.0 | 29.985569 | 19 |
| GACCGTG | 55 | 4.181322E-6 | 28.621096 | 29 |
| AGATCGG | 135 | 0.0 | 26.649675 | 17 |
| CATCTCG | 60 | 8.230345E-6 | 26.233276 | 39 |
| CGGAAGA | 155 | 0.0 | 23.214632 | 21 |
| CGGTTCA | 150 | 0.0 | 22.488005 | 29 |
| AGACCGT | 70 | 2.7135507E-5 | 22.488005 | 28 |
| TCGTATG | 80 | 2.98771E-6 | 22.488005 | 43 |
| GCGGTTC | 155 | 2.5465852E-11 | 20.311745 | 28 |
| CTCGTAT | 90 | 8.287037E-6 | 19.989338 | 42 |
| CCCGCCA | 125 | 1.6931153E-8 | 19.87322 | 3 |
| TCTCGTA | 80 | 7.592401E-5 | 19.677004 | 41 |
| ACGGGAT | 80 | 7.598477E-5 | 19.674955 | 13 |
| CCGAGAC | 195 | 0.0 | 19.604927 | 45 |
| AGAGCGG | 185 | 1.6370905E-11 | 18.231619 | 25 |
| CGCCACC | 150 | 6.9358066E-9 | 18.066563 | 5 |
| CCGCCAC | 140 | 6.2053005E-8 | 17.743946 | 4 |