Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391321.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 973256 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCCGTAA | 25 | 0.0021137754 | 35.976284 | 12 |
| TCTCGTA | 40 | 6.1855454E-4 | 28.109362 | 41 |
| GATCGGA | 65 | 4.8914444E-7 | 27.679754 | 18 |
| ATCGGAA | 70 | 9.3419476E-7 | 25.70263 | 19 |
| CTCGTAT | 45 | 0.0012304022 | 24.9861 | 42 |
| TCGTATG | 50 | 0.0022716923 | 22.48749 | 43 |
| CCGGCTA | 130 | 5.0931703E-11 | 22.48518 | 16 |
| CGGCTAA | 145 | 9.094947E-12 | 21.70983 | 17 |
| GACCGTT | 55 | 0.003946461 | 20.445272 | 29 |
| ACCGTTC | 55 | 0.003946461 | 20.445272 | 30 |
| TAAGCGA | 55 | 0.003946461 | 20.445272 | 31 |
| GCGGTTC | 90 | 8.281497E-6 | 19.990934 | 28 |
| AGATCGG | 90 | 8.2962215E-6 | 19.986826 | 17 |
| CGCCCGG | 105 | 1.4542511E-6 | 19.27301 | 13 |
| ATCCGCC | 60 | 0.006526857 | 18.741499 | 33 |
| TCGGAAG | 100 | 2.0541076E-5 | 17.99184 | 20 |
| CCTTCGT | 115 | 3.3290726E-6 | 17.673367 | 1 |
| AGACCGT | 80 | 0.0017157875 | 16.867352 | 28 |
| CCGTTCA | 80 | 0.0017157875 | 16.867352 | 31 |
| AGAGCGG | 110 | 4.6625733E-5 | 16.352856 | 25 |