Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378266.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1093338 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCAACGC | 30 | 0.005147816 | 29.999207 | 19 |
| CGGCTAA | 165 | 3.6379788E-12 | 20.454004 | 17 |
| CCGGCTA | 155 | 2.3646862E-11 | 20.322044 | 16 |
| AGCGCTC | 70 | 6.9801137E-4 | 19.28697 | 7 |
| ACGCCCG | 85 | 1.2046164E-4 | 18.528923 | 12 |
| ACCGCGC | 85 | 1.2046164E-4 | 18.528923 | 9 |
| CCCGGCT | 215 | 0.0 | 17.790228 | 15 |
| CGCGCCC | 90 | 1.8659489E-4 | 17.499538 | 11 |
| CGCCCGG | 135 | 8.583829E-7 | 16.666225 | 13 |
| GCCCGGC | 235 | 3.6379788E-11 | 15.318745 | 14 |
| CCCGGGT | 150 | 2.57393E-6 | 14.999604 | 45 |
| AGCCGAG | 120 | 9.75366E-5 | 14.999603 | 41 |
| CTCCCGG | 200 | 1.5734258E-8 | 14.624614 | 43 |
| CGCCACC | 155 | 3.6143174E-6 | 14.517074 | 5 |
| CACCGCG | 110 | 8.586616E-4 | 14.318459 | 8 |
| CGTGAGC | 175 | 8.1446524E-7 | 14.146365 | 1 |
| TCCCGGG | 235 | 9.0185495E-9 | 13.403902 | 44 |
| CACGCCC | 185 | 1.5279038E-6 | 13.378024 | 11 |
| GGCTAAT | 395 | 0.0 | 13.100919 | 18 |
| CCACGCC | 230 | 9.8358214E-8 | 12.717055 | 10 |