Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378289.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1166926 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTCGAT | 30 | 0.005148249 | 29.99886 | 24 |
| TCTCGTA | 45 | 3.4917975E-5 | 29.998857 | 41 |
| CGTATGC | 50 | 7.160346E-5 | 26.998972 | 44 |
| CTCGTAT | 50 | 7.160346E-5 | 26.998972 | 42 |
| AGACCGG | 60 | 8.194111E-6 | 26.249 | 28 |
| GCGGTTC | 55 | 1.3681762E-4 | 24.54557 | 8 |
| GACCGGG | 55 | 1.3685742E-4 | 24.54452 | 29 |
| GAGCGGT | 60 | 2.4667452E-4 | 22.501072 | 6 |
| AGAGCGG | 60 | 2.4667452E-4 | 22.501072 | 5 |
| CCGGGAT | 65 | 4.239373E-4 | 20.768442 | 31 |
| CGGTTCA | 65 | 4.239373E-4 | 20.768442 | 9 |
| AAGAGCG | 70 | 6.971259E-4 | 19.290766 | 4 |
| AGCGGTT | 70 | 6.983333E-4 | 19.285807 | 7 |
| CGGCTAA | 195 | 1.8189894E-12 | 18.460835 | 17 |
| ACGCCCG | 95 | 2.8202205E-4 | 16.578316 | 12 |
| ACCGGGA | 85 | 0.002565849 | 15.881747 | 30 |
| TCGTATG | 85 | 0.002565849 | 15.881747 | 43 |
| CCGGCTA | 215 | 1.5279511E-10 | 15.697076 | 16 |
| GGGCGAC | 90 | 0.0037463638 | 15.004572 | 3 |
| GAGACCG | 90 | 0.003754919 | 14.999429 | 27 |