Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391347.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 718133 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGTAGG | 25 | 0.0021131223 | 35.977272 | 13 |
| CGTATAA | 60 | 2.476821E-4 | 22.485796 | 10 |
| CGGCTAA | 70 | 2.7143766E-5 | 22.485796 | 17 |
| GATCGGA | 55 | 0.0039479462 | 20.443056 | 18 |
| GCGCTCC | 55 | 0.003949539 | 20.441633 | 8 |
| CGCCCGG | 70 | 7.0096995E-4 | 19.273539 | 13 |
| ATCGGAA | 60 | 0.006529315 | 18.73947 | 19 |
| ACGCCCG | 60 | 0.0065319403 | 18.738163 | 12 |
| TCGTATA | 60 | 0.0065319403 | 18.738163 | 9 |
| CCGGCTA | 95 | 2.8311103E-4 | 16.56848 | 16 |
| CACGCCC | 155 | 2.0777225E-7 | 15.957663 | 11 |
| AGGCGGG | 100 | 4.1821634E-4 | 15.741153 | 19 |
| ACCACGC | 175 | 4.89199E-8 | 15.418831 | 9 |
| CGGGGTT | 150 | 2.466193E-6 | 15.059737 | 1 |
| CGGAGGT | 90 | 0.003766144 | 14.991574 | 33 |
| GGCGGGC | 110 | 8.619386E-4 | 14.31014 | 20 |
| CCCGGCT | 110 | 8.62393E-4 | 14.309143 | 15 |
| GACCTCG | 100 | 0.0075754914 | 13.492416 | 41 |
| CTTCGTA | 100 | 0.0075789816 | 13.491477 | 7 |
| ACTAGAC | 190 | 2.0712614E-6 | 13.018998 | 19 |