Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378423.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1044365 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGATC | 55 | 1.1274824E-7 | 32.72748 | 30 |
| CTCGTAT | 50 | 1.9812906E-6 | 31.500202 | 42 |
| CGATCGT | 50 | 1.9812906E-6 | 31.500202 | 32 |
| GACCGAT | 60 | 2.418492E-7 | 30.000193 | 29 |
| GCGGTTC | 75 | 5.6403223E-8 | 26.998878 | 8 |
| GATCGTT | 60 | 8.190202E-6 | 26.250168 | 33 |
| TCTCGTA | 60 | 8.190202E-6 | 26.250168 | 41 |
| CGTATGC | 65 | 1.5229376E-5 | 24.232082 | 44 |
| CCGATCG | 65 | 1.5235024E-5 | 24.230923 | 31 |
| CGTTATC | 65 | 1.5235024E-5 | 24.230923 | 36 |
| TCGTATG | 65 | 1.5235024E-5 | 24.230923 | 43 |
| TATCTCG | 70 | 2.7025546E-5 | 22.500143 | 39 |
| GCGCCCG | 50 | 0.002265018 | 22.499067 | 12 |
| CGCCCGG | 70 | 2.7035545E-5 | 22.499065 | 13 |
| ACCGCGC | 65 | 4.2390605E-4 | 20.768368 | 9 |
| ATGCCGA | 90 | 8.24961E-6 | 20.000128 | 22 |
| ATCGTTA | 80 | 7.561779E-5 | 19.687626 | 34 |
| AGCGGTT | 105 | 1.4458838E-6 | 19.284914 | 7 |
| CCGCGCC | 70 | 6.984836E-4 | 19.284914 | 10 |
| CACCGCG | 70 | 6.984836E-4 | 19.284914 | 8 |