Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391388.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1064428 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGTAGG | 25 | 0.0020751096 | 36.112167 | 2 |
| TCTCGTA | 40 | 1.5649384E-5 | 33.73587 | 41 |
| GACCGGC | 60 | 2.475131E-4 | 22.489525 | 29 |
| ATCTCGT | 65 | 4.2499398E-4 | 20.760534 | 40 |
| GAGACCG | 80 | 7.589444E-5 | 19.678331 | 27 |
| AGACCGG | 80 | 7.589444E-5 | 19.678331 | 28 |
| CCGAGAC | 85 | 1.2086422E-4 | 18.520784 | 25 |
| AAGAGCG | 75 | 0.0010872118 | 18.056086 | 4 |
| ATCTTCG | 100 | 1.9923544E-5 | 18.056084 | 5 |
| CTCGTAT | 75 | 0.001113273 | 17.992466 | 42 |
| CGGCCAA | 75 | 0.0011139751 | 17.990774 | 17 |
| GTGCCCG | 100 | 2.0554487E-5 | 17.990774 | 12 |
| CGTATGC | 80 | 0.0017155326 | 16.867935 | 44 |
| ACCGGCT | 80 | 0.001716072 | 16.867142 | 30 |
| ATGCCGA | 80 | 0.001716072 | 16.867142 | 22 |
| CGGAAGA | 95 | 2.750025E-4 | 16.632956 | 1 |
| CGTATAA | 95 | 2.830154E-4 | 16.57045 | 10 |
| TTCACCG | 110 | 4.5150795E-5 | 16.414621 | 5 |
| TCGTATA | 100 | 4.1829608E-4 | 15.741927 | 9 |
| CGTGAGC | 270 | 1.8189894E-12 | 15.048865 | 1 |