Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378277.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 680081 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 40 | 6.8102963E-9 | 44.99779 | 44 |
| TCGTATG | 40 | 6.8102963E-9 | 44.99779 | 43 |
| CTCGTAT | 50 | 4.875983E-8 | 35.998234 | 42 |
| TCTCGTA | 55 | 1.1270458E-7 | 32.72567 | 41 |
| CGGATAA | 50 | 1.980803E-6 | 31.498455 | 34 |
| AGAGCGG | 60 | 2.4128894E-7 | 30.005146 | 5 |
| CCGCGGA | 55 | 4.1632393E-6 | 28.63496 | 31 |
| GCGGTTC | 65 | 4.870544E-7 | 27.690952 | 8 |
| GCGGATA | 60 | 8.188239E-6 | 26.24871 | 33 |
| CGCGGAT | 65 | 1.5231402E-5 | 24.229584 | 32 |
| ACCGCGG | 65 | 1.5231402E-5 | 24.229584 | 30 |
| ATCTCGT | 75 | 1.6966715E-6 | 23.998823 | 40 |
| CGCCTGG | 75 | 1.6966715E-6 | 23.998823 | 13 |
| TGCCGAG | 75 | 1.6966715E-6 | 23.998823 | 23 |
| AGCGGTT | 80 | 2.969262E-6 | 22.502207 | 7 |
| AGACCGC | 70 | 2.7019194E-5 | 22.498898 | 28 |
| CGGTTCA | 85 | 5.0293584E-6 | 21.175432 | 9 |
| AATCTCG | 85 | 5.0293584E-6 | 21.175432 | 39 |
| ATGCCGA | 85 | 5.0293584E-6 | 21.175432 | 22 |
| GAGCGGT | 90 | 8.230898E-6 | 20.003431 | 6 |