Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378096.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1837237 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TATGCCG | 230 | 0.0 | 34.23534 | 43 |
| TCGGTAT | 200 | 0.0 | 33.746265 | 23 |
| AGCCGAT | 190 | 0.0 | 31.970146 | 15 |
| CGTCATA | 190 | 0.0 | 31.970146 | 24 |
| GAATTCG | 220 | 0.0 | 31.701036 | 19 |
| AATTCGG | 215 | 0.0 | 31.391872 | 20 |
| TAAGCCG | 195 | 0.0 | 31.150398 | 13 |
| TTCGGTA | 220 | 0.0 | 30.678423 | 22 |
| GCCGATG | 215 | 0.0 | 30.345478 | 16 |
| CGGTATT | 225 | 0.0 | 29.996677 | 24 |
| GGCGGTC | 230 | 0.0 | 29.344578 | 35 |
| ACGTCAT | 225 | 0.0 | 28.996788 | 23 |
| ATGCCGT | 270 | 0.0 | 28.3302 | 44 |
| GCGGTCT | 250 | 0.0 | 27.896914 | 36 |
| TCGGGGA | 250 | 0.0 | 27.896914 | 14 |
| ATTCGGT | 250 | 0.0 | 26.997013 | 21 |
| TGACGTC | 245 | 0.0 | 26.629705 | 21 |
| GATGACG | 250 | 0.0 | 26.097113 | 19 |
| TGCCGTC | 310 | 0.0 | 25.412865 | 45 |
| CGGTCTC | 275 | 0.0 | 25.360828 | 37 |