Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378394.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1009286 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 55 | 4.1638486E-6 | 28.63674 | 42 |
| GACCGTT | 55 | 1.3679187E-4 | 24.545778 | 29 |
| AACGGGT | 65 | 1.5239408E-5 | 24.229889 | 12 |
| CCGTTGA | 70 | 2.7022948E-5 | 22.5003 | 31 |
| AGACCGT | 60 | 2.466999E-4 | 22.500298 | 28 |
| ACCGTTG | 65 | 4.23736E-4 | 20.769505 | 30 |
| ACGCCCG | 55 | 0.0039370395 | 20.453802 | 12 |
| CGCCCGG | 100 | 9.0558206E-7 | 20.249264 | 13 |
| ATCTCGT | 90 | 8.248668E-6 | 20.000265 | 40 |
| CGTATGC | 70 | 6.98204E-4 | 19.28597 | 44 |
| CGTTGAC | 70 | 6.98204E-4 | 19.28597 | 32 |
| AGAGCGG | 70 | 6.98204E-4 | 19.28597 | 5 |
| CGTGAGC | 200 | 0.0 | 19.127148 | 1 |
| CCGGCTA | 95 | 1.31598445E-5 | 18.94668 | 16 |
| CATGCGC | 60 | 0.006505739 | 18.752106 | 1 |
| AGCGGTT | 75 | 0.0011099979 | 18.000237 | 7 |
| TCTCGTA | 75 | 0.0011099979 | 18.000237 | 41 |
| GAGACCG | 120 | 5.1711904E-6 | 16.875223 | 27 |
| CCTTCGT | 175 | 2.6848284E-9 | 16.716162 | 1 |
| GCCCGGC | 205 | 7.4578566E-11 | 16.462816 | 14 |