Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378254.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1056471 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGCCCG | 70 | 2.7031429E-5 | 22.499552 | 12 |
| CTTCGTA | 130 | 5.7826946E-7 | 17.307346 | 7 |
| ATCTTCG | 145 | 1.8078736E-6 | 15.517666 | 5 |
| TTCGTAT | 105 | 6.037204E-4 | 14.999701 | 8 |
| TCGTATA | 105 | 6.037204E-4 | 14.999701 | 9 |
| CGGCTAA | 145 | 3.104472E-5 | 13.965238 | 17 |
| CGTATAA | 130 | 1.926222E-4 | 13.845878 | 10 |
| CGCCACT | 120 | 0.0016565021 | 13.124739 | 9 |
| CCGGCTA | 155 | 5.8100166E-5 | 13.064255 | 16 |
| GCGATCT | 125 | 0.002251647 | 12.599748 | 16 |
| CACGCCC | 240 | 1.7122329E-7 | 12.187257 | 11 |
| GCCCGGC | 240 | 1.7122329E-7 | 12.187257 | 14 |
| ACCACGC | 260 | 3.7034624E-8 | 12.115143 | 9 |
| TCGCTTG | 205 | 4.8258316E-6 | 12.072929 | 15 |
| GTGGCGC | 150 | 6.449291E-4 | 11.999761 | 11 |
| CGCCCGG | 150 | 6.449291E-4 | 11.999761 | 13 |
| CCACGCC | 270 | 6.258597E-8 | 11.666433 | 10 |
| CCCGGGT | 155 | 8.492769E-4 | 11.612671 | 45 |
| AGTGGCG | 195 | 3.8435894E-5 | 11.538231 | 10 |
| CACCACG | 320 | 4.780304E-9 | 11.249775 | 8 |