Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378296.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1156652 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 80 | 1.0004442E-10 | 30.93658 | 42 |
| GTCGATG | 30 | 0.005148022 | 29.999107 | 35 |
| GACCGTA | 85 | 2.0372681E-10 | 29.11804 | 29 |
| AGCGGTT | 95 | 2.3646862E-11 | 28.421436 | 7 |
| CGGAAGA | 90 | 3.947207E-10 | 27.509886 | 1 |
| TCTCGTA | 90 | 3.965397E-10 | 27.499182 | 41 |
| CGTATGC | 100 | 4.5474735E-11 | 26.999195 | 44 |
| ATGCCGA | 100 | 4.5474735E-11 | 26.999195 | 22 |
| TCGTATG | 95 | 7.421477E-10 | 26.051857 | 43 |
| GAGACCG | 100 | 1.3442332E-9 | 24.750334 | 27 |
| AGACCGT | 100 | 1.3442332E-9 | 24.750334 | 28 |
| CGTAAAC | 100 | 1.3442332E-9 | 24.750334 | 32 |
| GCGGTTC | 110 | 1.5279511E-10 | 24.545786 | 8 |
| AAGAGCG | 115 | 2.6557245E-10 | 23.480606 | 4 |
| CGGTTCA | 120 | 4.5110937E-10 | 22.49933 | 9 |
| AATGCCG | 120 | 4.5110937E-10 | 22.49933 | 21 |
| GAGCGGT | 130 | 1.2278178E-9 | 20.769508 | 6 |
| CCGAGAC | 130 | 1.2278178E-9 | 20.76861 | 25 |
| TGCCGAG | 130 | 1.2278178E-9 | 20.76861 | 23 |
| CCGGCTA | 135 | 1.9645086E-9 | 19.999405 | 16 |