Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391327.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 678453 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 45 | 1.9355866E-8 | 39.97812 | 41 |
| CGACTCT | 25 | 0.002068967 | 36.1321 | 1 |
| GATCGGA | 75 | 4.7293724E-11 | 32.981945 | 18 |
| AGATCGG | 75 | 4.7293724E-11 | 32.97952 | 17 |
| ATCGGAA | 80 | 1.0004442E-10 | 30.920576 | 19 |
| TCGGAAG | 90 | 1.2732926E-11 | 29.98359 | 20 |
| GACCGTC | 65 | 4.888625E-7 | 27.6792 | 29 |
| CTCGTAT | 65 | 4.891772E-7 | 27.67716 | 42 |
| TCGTATG | 65 | 4.891772E-7 | 27.67716 | 43 |
| CTTCGTA | 60 | 8.224633E-6 | 26.233706 | 7 |
| CGTATGC | 70 | 9.3366E-7 | 25.702112 | 44 |
| ACCGTCT | 70 | 9.3366E-7 | 25.702112 | 30 |
| CGGCTAA | 115 | 9.094947E-12 | 25.418993 | 17 |
| ATCTCGT | 80 | 1.0580516E-7 | 25.298653 | 40 |
| TTCGTAT | 45 | 0.0012304822 | 24.984482 | 8 |
| CCGGCTA | 120 | 1.6370905E-11 | 24.35987 | 16 |
| CCGCCAC | 65 | 1.4808091E-5 | 24.317884 | 4 |
| GAGCGGT | 115 | 6.7993824E-9 | 21.509966 | 26 |
| AGACCGT | 85 | 5.0478484E-6 | 21.166447 | 28 |
| CCCGCCA | 75 | 4.4735934E-5 | 21.075497 | 3 |