Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391182.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1034151 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA | 4111 | 0.39752415266242547 | No Hit |
| TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA | 2748 | 0.26572521807743743 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATGACG | 495 | 0.0 | 42.72571 | 19 |
| TAAGCCG | 500 | 0.0 | 41.848473 | 13 |
| GCCGATG | 495 | 0.0 | 41.816654 | 16 |
| CGATGAC | 505 | 0.0 | 41.43413 | 18 |
| CGTCATA | 505 | 0.0 | 41.43413 | 24 |
| AGCCGAT | 500 | 0.0 | 41.398487 | 15 |
| GACGTCA | 510 | 0.0 | 41.027916 | 22 |
| ATGACGT | 510 | 0.0 | 41.027916 | 20 |
| CCGATGA | 505 | 0.0 | 40.9886 | 17 |
| TGACGTC | 520 | 0.0 | 40.238914 | 21 |
| ACGTCAT | 535 | 0.0 | 39.951813 | 23 |
| CGGTATT | 465 | 0.0 | 38.22441 | 24 |
| ATTCGGT | 460 | 0.0 | 38.15078 | 21 |
| TCGGTAT | 460 | 0.0 | 38.15078 | 23 |
| GGCGGTC | 450 | 0.0 | 37.998615 | 35 |
| AATTCGG | 470 | 0.0 | 37.81777 | 20 |
| AAGCCGA | 560 | 0.0 | 37.364708 | 14 |
| TTCGGTA | 470 | 0.0 | 37.33906 | 22 |
| GAATTCG | 485 | 0.0 | 36.648144 | 19 |
| CGGGGAA | 485 | 0.0 | 36.184242 | 15 |