Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378380.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 837456 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCCGT | 25 | 0.0021069748 | 35.999332 | 45 |
| CGCTTAA | 70 | 8.1308826E-10 | 32.142258 | 32 |
| CCGCTTA | 75 | 1.7025741E-9 | 29.999441 | 31 |
| CGTATGC | 90 | 3.947207E-10 | 27.499489 | 44 |
| CTCGTAT | 90 | 3.947207E-10 | 27.499489 | 42 |
| ACCGCTT | 85 | 6.4774213E-9 | 26.470095 | 30 |
| GACCGCT | 90 | 1.1903467E-8 | 24.999537 | 29 |
| GCGGTTC | 100 | 1.3442332E-9 | 24.74954 | 8 |
| TCTCGTA | 100 | 1.3442332E-9 | 24.74954 | 41 |
| GAGCGGT | 110 | 1.5097612E-10 | 24.546465 | 6 |
| TCGTATG | 105 | 2.3646862E-9 | 23.57099 | 43 |
| AAGAGCG | 110 | 4.0472514E-9 | 22.500925 | 4 |
| ATCTCGT | 120 | 1.1035809E-8 | 20.625847 | 40 |
| CGTATAA | 80 | 7.5609496E-5 | 19.687134 | 10 |
| AGCGGTT | 140 | 3.081368E-9 | 19.286507 | 7 |
| CACGTGC | 70 | 6.979373E-4 | 19.286507 | 1 |
| AGAGCGG | 140 | 3.081368E-9 | 19.286507 | 5 |
| TTCGTAT | 85 | 1.2041173E-4 | 18.529066 | 8 |
| TCGTATA | 85 | 1.2041173E-4 | 18.529066 | 9 |
| CGGTTCA | 135 | 4.2689862E-8 | 18.332993 | 9 |