Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378418.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1011839 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGAT | 50 | 1.9814615E-6 | 31.49969 | 29 |
| AGACCGA | 50 | 1.9814615E-6 | 31.49969 | 28 |
| ACCGATG | 55 | 4.164609E-6 | 28.636082 | 30 |
| CGTATGC | 65 | 1.5236337E-5 | 24.230528 | 44 |
| TCTCGTA | 65 | 1.5236337E-5 | 24.230528 | 41 |
| GGGCGAC | 75 | 1.6974591E-6 | 23.999762 | 28 |
| CGGAAGA | 80 | 2.9693256E-6 | 22.504225 | 1 |
| CCGATGC | 70 | 2.7027869E-5 | 22.499777 | 31 |
| GAGACCG | 70 | 2.7027869E-5 | 22.499777 | 27 |
| GAGCGGT | 70 | 2.7027869E-5 | 22.499777 | 6 |
| AGCGGTT | 85 | 5.0316594E-6 | 21.17626 | 7 |
| ATGCCGA | 85 | 5.0316594E-6 | 21.17626 | 22 |
| GCGGTTC | 75 | 4.6022855E-5 | 20.99979 | 8 |
| TCGTATG | 75 | 4.6022855E-5 | 20.99979 | 43 |
| CGATGCT | 90 | 8.250348E-6 | 19.999804 | 32 |
| TATCTCG | 80 | 7.5624324E-5 | 19.687305 | 39 |
| CCGAGAC | 95 | 1.3156892E-5 | 18.947182 | 25 |
| CGGTTCA | 85 | 1.2043519E-4 | 18.529226 | 9 |
| AGAGCGG | 100 | 2.0464155E-5 | 17.999823 | 5 |
| TGCCGAG | 105 | 3.1120908E-5 | 17.142687 | 23 |