Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378261.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 557531 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGGGTT | 20 | 7.0308486E-4 | 44.9991 | 13 |
| CCGGTAA | 35 | 6.2433555E-6 | 38.570663 | 31 |
| ACCGGTA | 40 | 1.5593441E-5 | 33.749325 | 30 |
| GCGGTTC | 40 | 1.5593441E-5 | 33.749325 | 8 |
| GACCGGT | 40 | 1.5593441E-5 | 33.749325 | 29 |
| TCTCGTA | 40 | 1.5593441E-5 | 33.749325 | 41 |
| GAGCGGT | 50 | 1.979508E-6 | 31.499372 | 6 |
| CGTATGC | 45 | 3.488127E-5 | 29.999403 | 44 |
| CGGTAAG | 55 | 4.160527E-6 | 28.635792 | 32 |
| ATCTCGT | 50 | 7.15287E-5 | 26.999462 | 40 |
| CTCGTAT | 50 | 7.15287E-5 | 26.999462 | 42 |
| TCGTTGG | 70 | 9.287487E-7 | 25.71608 | 4 |
| CATCTCG | 55 | 1.3671539E-4 | 24.544964 | 39 |
| AGCGGTT | 55 | 1.3671539E-4 | 24.544964 | 7 |
| TCGTATG | 55 | 1.3671539E-4 | 24.544964 | 43 |
| AGAGCGG | 60 | 2.4641343E-4 | 22.50157 | 5 |
| TTCGTTG | 80 | 2.9683997E-6 | 22.501568 | 3 |
| CGGAAGA | 65 | 4.2247848E-4 | 20.77627 | 1 |
| CTTCGTT | 65 | 4.2273442E-4 | 20.774406 | 2 |
| CGGTTCA | 65 | 4.23503E-4 | 20.768816 | 9 |