Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378139.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1251166 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 200 | 0.0 | 37.12108 | 41 |
| CTCGTAT | 205 | 0.0 | 36.215683 | 42 |
| GACCGTG | 200 | 0.0 | 35.996197 | 29 |
| AGACCGT | 205 | 0.0 | 35.118237 | 28 |
| CGTATGC | 215 | 0.0 | 34.53123 | 44 |
| TATCTCG | 225 | 0.0 | 33.996407 | 39 |
| TCGTATG | 225 | 0.0 | 33.996407 | 43 |
| CGTGTAC | 220 | 0.0 | 33.746433 | 32 |
| GCGGTTC | 230 | 0.0 | 33.257355 | 8 |
| AGAGCGG | 235 | 0.0 | 32.57188 | 5 |
| CCGTGTA | 235 | 0.0 | 31.592405 | 31 |
| AAGAGCG | 260 | 0.0 | 31.17173 | 4 |
| ATCTCGT | 245 | 0.0 | 30.302917 | 40 |
| GAGACCG | 245 | 0.0 | 30.302917 | 27 |
| CCGCTAG | 30 | 0.0051500904 | 29.99683 | 41 |
| CGGTTCA | 265 | 0.0 | 29.713842 | 9 |
| GAGCGGT | 265 | 0.0 | 28.884499 | 6 |
| AGCGGTT | 285 | 0.0 | 26.83927 | 7 |
| CCGAGAC | 270 | 0.0 | 26.66385 | 25 |
| ACCGTGT | 290 | 0.0 | 25.600744 | 30 |