Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378389.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1106239 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGAC | 35 | 2.820542E-4 | 32.142406 | 29 |
| CGACTTA | 35 | 2.820542E-4 | 32.142406 | 32 |
| CGTATGC | 50 | 0.0022647413 | 22.499685 | 44 |
| TCGTATG | 50 | 0.0022647413 | 22.499685 | 43 |
| CCGGCTA | 170 | 0.0 | 21.174257 | 16 |
| AGAGCGG | 55 | 0.0039336756 | 20.457031 | 5 |
| GCGCGCG | 55 | 0.003936767 | 20.454258 | 7 |
| TCTCGTA | 55 | 0.003936767 | 20.454258 | 41 |
| ACCGCGC | 55 | 0.003938829 | 20.452408 | 9 |
| ACACCCG | 70 | 6.9881533E-4 | 19.2837 | 12 |
| GAGCGGT | 60 | 0.0065057776 | 18.75228 | 6 |
| CTCGTAT | 60 | 0.0065108733 | 18.749737 | 42 |
| ACCGACT | 60 | 0.0065108733 | 18.749737 | 30 |
| AGCGGTT | 60 | 0.0065108733 | 18.749737 | 7 |
| GAGACCG | 60 | 0.0065108733 | 18.749737 | 27 |
| GACTCCG | 75 | 0.0011076004 | 18.006258 | 3 |
| CCGAGAC | 80 | 0.0017109506 | 16.874763 | 25 |
| CGGCTAA | 220 | 1.2732926E-11 | 16.361927 | 17 |
| AGCGAGG | 85 | 0.0025653245 | 15.882129 | 24 |
| CCCGGCT | 215 | 1.5279511E-10 | 15.696034 | 15 |