Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378249.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1301751 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGCGTA | 50 | 1.0822987E-9 | 40.500313 | 32 |
| GACCGGC | 65 | 1.4037141E-8 | 31.154085 | 29 |
| ACCGACA | 30 | 0.0051482795 | 29.99908 | 19 |
| ACCGGCG | 70 | 2.8865543E-8 | 28.928795 | 30 |
| GCGGTTC | 80 | 1.05394065E-7 | 25.312695 | 8 |
| CCGGCGT | 80 | 1.05394065E-7 | 25.312695 | 31 |
| GAGACCG | 85 | 1.8939136E-7 | 23.823713 | 27 |
| AGACCGG | 85 | 1.8939136E-7 | 23.823713 | 28 |
| GGCGTAA | 85 | 1.8946048E-7 | 23.822798 | 33 |
| TCTCGTA | 85 | 1.8946048E-7 | 23.822798 | 41 |
| GAGCGGT | 90 | 3.2873868E-7 | 22.500174 | 6 |
| ATCTCGT | 90 | 3.2886055E-7 | 22.49931 | 40 |
| TCGTATG | 90 | 3.2886055E-7 | 22.49931 | 43 |
| ATGCCGA | 90 | 3.2886055E-7 | 22.49931 | 22 |
| AATGCCG | 105 | 6.1114406E-8 | 21.427912 | 21 |
| AGCGGTT | 95 | 5.5324927E-7 | 21.315952 | 7 |
| GCGTAAA | 95 | 5.53453E-7 | 21.315134 | 34 |
| CTCGTAT | 100 | 9.059477E-7 | 20.249378 | 42 |
| CGGTTCA | 100 | 9.059477E-7 | 20.249378 | 9 |
| GTTTGCG | 60 | 0.006512104 | 18.749424 | 39 |