Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378262.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 811790 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGTATG | 40 | 6.166299E-4 | 28.123653 | 43 |
| CGGGTAG | 50 | 7.1581875E-5 | 26.998705 | 32 |
| CGGTTCA | 70 | 2.70273E-5 | 22.498922 | 9 |
| TATCTCG | 60 | 0.006508373 | 18.750257 | 39 |
| CGTATGC | 60 | 0.006510688 | 18.749102 | 44 |
| CCGCCAC | 110 | 2.2513723E-6 | 18.41161 | 4 |
| CCGGGTA | 75 | 0.0011101981 | 17.999138 | 31 |
| AATGCCG | 75 | 0.0011101981 | 17.999138 | 21 |
| CGGCTAA | 140 | 6.47251E-8 | 17.677725 | 17 |
| CCGGCTA | 115 | 3.4477143E-6 | 17.607853 | 16 |
| GCGGTTC | 80 | 0.0017108091 | 16.874191 | 8 |
| CCGAGAC | 85 | 0.0025651138 | 15.881592 | 25 |
| GAACCCG | 100 | 4.166679E-4 | 15.749245 | 21 |
| AAGAGCG | 115 | 6.7706496E-5 | 15.654316 | 4 |
| CGGAAGA | 105 | 6.0166215E-4 | 15.005752 | 1 |
| AGCGGTT | 90 | 0.00374924 | 15.002053 | 7 |
| GAGCGGT | 90 | 0.00374924 | 15.002053 | 6 |
| CCCGGCT | 135 | 1.5811305E-5 | 14.999281 | 15 |
| GAATCGC | 125 | 1.3802241E-4 | 14.399309 | 12 |
| TGCCGAG | 95 | 0.0053759217 | 14.2098465 | 23 |