Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378399.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1010675 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGATATC | 50 | 4.8807124E-8 | 35.997704 | 32 |
| CCGATAT | 45 | 8.702882E-7 | 34.99777 | 31 |
| ACCGATA | 45 | 8.702882E-7 | 34.99777 | 30 |
| GACCGAT | 50 | 1.9822928E-6 | 31.497992 | 29 |
| CGCGTAA | 30 | 0.005148574 | 29.998087 | 22 |
| TCTCGTA | 75 | 5.6385034E-8 | 26.999613 | 41 |
| GCGGTTC | 65 | 1.5236836E-5 | 24.230423 | 8 |
| GAGCGGT | 75 | 4.5971734E-5 | 21.002815 | 6 |
| AGACCGA | 75 | 4.60419E-5 | 20.998661 | 28 |
| CGTATGC | 65 | 4.2381528E-4 | 20.768934 | 44 |
| CTCGTAT | 65 | 4.2381528E-4 | 20.768934 | 42 |
| CATCTCG | 65 | 4.2381528E-4 | 20.768934 | 39 |
| CGGTTCA | 80 | 7.565551E-5 | 19.686245 | 9 |
| ATGCCGA | 80 | 7.565551E-5 | 19.686245 | 22 |
| CTTCGTT | 175 | 7.2759576E-12 | 19.294031 | 2 |
| ACGGGAT | 145 | 4.774847E-9 | 18.619503 | 13 |
| CGGAAGA | 85 | 1.1998296E-4 | 18.538319 | 1 |
| AGCGGTT | 85 | 1.2039339E-4 | 18.530064 | 7 |
| ATCTCGT | 100 | 2.0464897E-5 | 17.999743 | 40 |
| CCGAGAC | 90 | 1.8663058E-4 | 17.498884 | 25 |