Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378387.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1310660 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGGACC | 25 | 0.0021071285 | 36.000305 | 45 |
| TCGTATG | 140 | 0.0 | 33.750286 | 43 |
| GCGGTTC | 140 | 0.0 | 33.749 | 8 |
| CGTATGC | 145 | 0.0 | 32.586483 | 44 |
| TCTCGTA | 140 | 0.0 | 32.14313 | 41 |
| CGTTGTA | 140 | 0.0 | 32.141903 | 32 |
| GACCGTT | 140 | 0.0 | 32.141903 | 29 |
| CTCGTAT | 155 | 0.0 | 30.48413 | 42 |
| ATCTCGT | 150 | 0.0 | 30.000254 | 40 |
| GCGAGTC | 30 | 0.005147306 | 30.000254 | 40 |
| CGGTTCA | 165 | 0.0 | 29.999111 | 9 |
| GAGCGGT | 160 | 0.0 | 29.5315 | 6 |
| CCGTTGT | 155 | 0.0 | 29.031399 | 31 |
| AGACCGT | 165 | 0.0 | 28.635515 | 28 |
| ACCGTTG | 160 | 0.0 | 28.124165 | 30 |
| CATCTCG | 165 | 0.0 | 27.272959 | 39 |
| GAGACCG | 175 | 0.0 | 26.999199 | 27 |
| AGCGGTT | 185 | 0.0 | 25.539783 | 7 |
| ATGCCGA | 185 | 0.0 | 25.539783 | 22 |
| AGAGCGG | 190 | 0.0 | 24.868633 | 5 |