Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391227.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 624618 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGAA | 30 | 1.1430905E-4 | 37.478985 | 29 |
| ACCGAAA | 30 | 1.1430905E-4 | 37.478985 | 30 |
| ATCTCGT | 45 | 0.0012299397 | 24.98599 | 40 |
| CTCGTAT | 45 | 0.0012299397 | 24.98599 | 42 |
| GAGACCG | 50 | 0.002270845 | 22.487392 | 27 |
| TCTCGTA | 50 | 0.002270845 | 22.487392 | 41 |
| GCGCTCC | 50 | 0.002270845 | 22.487392 | 8 |
| CGCTCCA | 65 | 4.2512975E-4 | 20.757591 | 9 |
| CGTATGC | 55 | 0.00394735 | 20.443083 | 44 |
| AAAGCGC | 70 | 6.8146933E-4 | 19.353924 | 5 |
| AGCGCTC | 60 | 0.006528336 | 18.739492 | 7 |
| AAGCGCT | 75 | 0.0010834703 | 18.06366 | 6 |
| GTCCCTA | 80 | 0.0017160879 | 16.865543 | 38 |
| GTATGCC | 95 | 2.828838E-4 | 16.569658 | 45 |
| GATCTCG | 85 | 0.00257301 | 15.873453 | 39 |
| GAGACGG | 135 | 0.004020384 | 11.660129 | 41 |
| GCTAATT | 425 | 3.274181E-11 | 10.583149 | 19 |
| GTGCCAC | 200 | 5.9979927E-4 | 10.160809 | 4 |
| CTGGCTA | 230 | 2.0586459E-4 | 9.777127 | 16 |
| CCGTCTC | 190 | 0.0044809743 | 9.50719 | 3 |