Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391221.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 850744 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAACGTC | 50 | 6.9683236E-5 | 27.105745 | 1 |
| ACGTCTT | 80 | 7.339581E-5 | 19.763437 | 3 |
| AACGTCT | 70 | 6.802843E-4 | 19.360104 | 2 |
| GATCGGA | 70 | 7.008177E-4 | 19.274757 | 18 |
| ACCACGC | 250 | 0.0 | 18.888151 | 9 |
| CGTCTTC | 125 | 3.678615E-7 | 18.06943 | 4 |
| ACGCCCA | 100 | 2.0566837E-5 | 17.988716 | 12 |
| AGATCGG | 75 | 0.0011145815 | 17.988714 | 17 |
| CCACGCC | 255 | 0.0 | 16.754196 | 10 |
| CGCCACC | 150 | 1.3604404E-7 | 16.563643 | 5 |
| CACCACG | 280 | 0.0 | 16.062298 | 8 |
| CACGCCC | 145 | 1.8192186E-6 | 15.507513 | 11 |
| CGCCCGC | 105 | 5.85817E-4 | 15.058746 | 1 |
| CCCGCCA | 155 | 3.472942E-6 | 14.572121 | 3 |
| CCGAGAC | 140 | 2.2418468E-5 | 14.455218 | 45 |
| GAAGCAT | 520 | 0.0 | 14.271572 | 27 |
| CGCCTGG | 175 | 8.2193037E-7 | 14.13399 | 13 |
| CCGCCAC | 160 | 4.8261663E-6 | 14.116741 | 4 |
| ATCGGAA | 100 | 0.0075773248 | 13.49233 | 19 |
| GCGGAGC | 135 | 2.6634563E-4 | 13.325758 | 32 |