Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391217.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 817413 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAACGAC | 55 | 0.003953381 | 20.438612 | 41 |
| CGGGCGT | 85 | 0.0024824096 | 15.959798 | 1 |
| CCTTCGT | 115 | 6.5026616E-5 | 15.728495 | 1 |
| GCGCTCC | 90 | 0.003770652 | 14.989234 | 8 |
| CGTATAA | 90 | 0.0037721868 | 14.988317 | 11 |
| CGCTCCA | 95 | 0.0053999126 | 14.200327 | 9 |
| TCGTATA | 95 | 0.0053999126 | 14.200327 | 10 |
| CTTCGTT | 140 | 3.459366E-4 | 12.919836 | 2 |
| CGGGATT | 125 | 0.0022637625 | 12.590186 | 14 |
| GCTAGAC | 165 | 1.04919745E-4 | 12.263918 | 33 |
| GCCGAGG | 220 | 7.984054E-7 | 12.263167 | 44 |
| AGGCCGA | 240 | 1.7273669E-7 | 12.178006 | 42 |
| ACGGGAT | 135 | 0.0040287753 | 11.657578 | 13 |
| CTAGACA | 465 | 0.0 | 11.603858 | 20 |
| ACTAGAC | 295 | 1.7524144E-8 | 11.4317665 | 19 |
| CCGAGGC | 205 | 6.4438456E-5 | 10.96706 | 45 |
| TTCGTTG | 145 | 0.00657941 | 10.915034 | 3 |
| GACCTCG | 165 | 0.0014412557 | 10.900594 | 39 |
| AAACGGG | 190 | 3.8922485E-4 | 10.649593 | 11 |
| ACCTCGT | 175 | 0.0023522163 | 10.277703 | 40 |