Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378379.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1095507 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGACAG | 100 | 2.0468859E-5 | 17.999598 | 30 |
| GGCGACA | 105 | 3.1128027E-5 | 17.142475 | 29 |
| CGACAGA | 120 | 5.1737516E-6 | 16.874624 | 31 |
| GGGCGAC | 105 | 6.0375605E-4 | 14.999665 | 28 |
| CTTCGTT | 150 | 4.2637213E-5 | 13.502164 | 2 |
| CGTGAGC | 200 | 3.6458605E-6 | 12.379808 | 1 |
| CCTTCGT | 150 | 6.427518E-4 | 12.004663 | 1 |
| CCGGGCG | 190 | 2.9353261E-5 | 11.846706 | 1 |
| CGAGGTC | 155 | 8.493373E-4 | 11.612645 | 12 |
| CGGGCGC | 200 | 4.9674338E-5 | 11.251803 | 2 |
| GGCGGAG | 245 | 2.896073E-6 | 11.020162 | 31 |
| ACGAGGT | 170 | 0.001837666 | 10.587998 | 11 |
| TCACGAG | 150 | 0.008778092 | 10.499766 | 9 |
| GTTAGCC | 150 | 0.008778092 | 10.499766 | 13 |
| CGCCACC | 185 | 0.003704728 | 9.729957 | 5 |
| AGAATCG | 210 | 9.7065035E-4 | 9.643083 | 5 |
| GAGCCGA | 210 | 9.7105623E-4 | 9.642642 | 40 |
| GGGCGCG | 190 | 0.004613745 | 9.47477 | 3 |
| AGGCGGA | 285 | 1.7555214E-5 | 9.473473 | 30 |
| GCCACCA | 785 | 0.0 | 9.458819 | 6 |