Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378140.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1417773 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGTC | 170 | 0.0 | 34.411144 | 29 |
| CTCGTAT | 185 | 0.0 | 34.05344 | 42 |
| ACCGTCA | 190 | 0.0 | 33.1573 | 30 |
| CGTATGC | 195 | 0.0 | 32.307114 | 44 |
| TCTCGTA | 205 | 0.0 | 31.828695 | 41 |
| TCGTATG | 210 | 0.0 | 31.069773 | 43 |
| CCGTCAT | 210 | 0.0 | 29.99946 | 31 |
| ATCTCGT | 225 | 0.0 | 28.999475 | 40 |
| GATCGGA | 70 | 2.8896466E-8 | 28.92601 | 18 |
| AGAGCGG | 250 | 0.0 | 27.005228 | 5 |
| AGCGGTT | 245 | 0.0 | 26.630295 | 7 |
| AGACCGT | 220 | 0.0 | 26.59043 | 28 |
| CGTCATC | 240 | 0.0 | 26.249527 | 32 |
| GCGGTTC | 240 | 0.0 | 26.247675 | 8 |
| GAGCGGT | 260 | 0.0 | 25.101013 | 6 |
| AAGAGCG | 295 | 0.0 | 23.648645 | 4 |
| CGGAAGA | 280 | 0.0 | 23.318779 | 1 |
| CGGTTCA | 275 | 0.0 | 22.907063 | 9 |
| CTGTCGG | 50 | 0.0022660343 | 22.498009 | 13 |
| GTCGGCT | 70 | 2.7054184E-5 | 22.498009 | 15 |