Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391356.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 782563 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 30 | 1.1429856E-4 | 37.481045 | 41 |
| ACCGTAT | 35 | 2.826876E-4 | 32.128662 | 30 |
| GACCGTA | 40 | 6.180316E-4 | 28.11258 | 29 |
| CGTATGC | 45 | 0.0012298241 | 24.987362 | 44 |
| TCGTATA | 55 | 1.3729543E-4 | 24.531479 | 9 |
| CCGTATT | 50 | 0.002269787 | 22.490063 | 31 |
| CTCGTAT | 50 | 0.00227063 | 22.488626 | 42 |
| ATCGGAA | 80 | 2.9858184E-6 | 22.488625 | 19 |
| CTTCGTA | 80 | 2.9874755E-6 | 22.48719 | 7 |
| CGTATAA | 60 | 2.476058E-4 | 22.48719 | 10 |
| AGACCGT | 55 | 0.003945512 | 20.445513 | 28 |
| ATCTCGT | 55 | 0.003946973 | 20.444206 | 40 |
| GATCGGA | 95 | 1.3206998E-5 | 18.93779 | 18 |
| GAGACCG | 60 | 0.006527708 | 18.740522 | 27 |
| AGAGCGG | 120 | 2.5074223E-7 | 18.740522 | 25 |
| AGCGGTT | 100 | 2.054194E-5 | 17.990902 | 27 |
| AGATCGG | 100 | 2.0553236E-5 | 17.989752 | 17 |
| GAGCGGT | 105 | 3.1238975E-5 | 17.134192 | 26 |
| CCGAGAC | 105 | 3.1238975E-5 | 17.134192 | 45 |
| CCCGCCA | 120 | 5.0103317E-6 | 16.930296 | 3 |