Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378409.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1076807 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGACCGC | 65 | 3.6743586E-10 | 34.614704 | 28 |
| CTCGTAT | 70 | 8.1490725E-10 | 32.142227 | 42 |
| GACCGCT | 70 | 8.1490725E-10 | 32.142227 | 29 |
| TCTCGTA | 75 | 1.7043931E-9 | 29.999413 | 41 |
| CGTATGC | 90 | 3.965397E-10 | 27.49946 | 44 |
| CGGTTCA | 90 | 3.965397E-10 | 27.49946 | 9 |
| AGATCGT | 45 | 0.0012256489 | 25.002993 | 3 |
| TATCTCG | 90 | 1.1910743E-8 | 24.99951 | 39 |
| GCGGTTC | 105 | 2.3665052E-9 | 23.570967 | 8 |
| ACCGCTG | 105 | 2.3665052E-9 | 23.570967 | 30 |
| ATCTCGT | 110 | 4.0527084E-9 | 22.49956 | 40 |
| TCGTATG | 110 | 4.0527084E-9 | 22.49956 | 43 |
| CGGAAGA | 120 | 1.0999429E-8 | 20.633217 | 1 |
| ATGCCGA | 120 | 1.105218E-8 | 20.624596 | 22 |
| CGCTGAT | 110 | 9.9847966E-8 | 20.454145 | 32 |
| CCGCTGA | 110 | 9.9847966E-8 | 20.454145 | 31 |
| GAGACCG | 110 | 9.9847966E-8 | 20.454145 | 27 |
| CCCCGAT | 55 | 0.0039368253 | 20.454145 | 24 |
| CCGAGAC | 110 | 9.9847966E-8 | 20.454145 | 25 |
| AGCGGTT | 135 | 1.9645086E-9 | 19.999607 | 7 |