Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391235.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1006474 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA | 5187 | 0.515363536464926 | No Hit |
| TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA | 3863 | 0.3838151805213051 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTCATA | 525 | 0.0 | 42.850185 | 24 |
| GCCGATG | 540 | 0.0 | 42.076508 | 16 |
| GACGTCA | 530 | 0.0 | 42.021484 | 22 |
| CCTCGGG | 510 | 0.0 | 41.904964 | 12 |
| TTCGGTA | 565 | 0.0 | 41.807373 | 22 |
| TGACGTC | 540 | 0.0 | 41.65991 | 21 |
| CGATGAC | 540 | 0.0 | 41.65991 | 18 |
| TTCCTCG | 510 | 0.0 | 41.49684 | 10 |
| GGCGGTC | 570 | 0.0 | 41.44064 | 35 |
| TCGGTAT | 570 | 0.0 | 41.44064 | 23 |
| GCGGTCT | 575 | 0.0 | 41.080288 | 36 |
| AGCCGAT | 555 | 0.0 | 40.9393 | 15 |
| TAAGCCG | 560 | 0.0 | 40.573772 | 13 |
| ATGACGT | 550 | 0.0 | 40.493427 | 20 |
| ACGTCAT | 550 | 0.0 | 40.493427 | 23 |
| AGGCGGT | 585 | 0.0 | 40.37806 | 34 |
| CCGATGA | 560 | 0.0 | 40.17205 | 17 |
| CGGTCTC | 590 | 0.0 | 40.035873 | 37 |
| CGGTATT | 595 | 0.0 | 39.699436 | 24 |
| TCCTCGG | 540 | 0.0 | 39.60839 | 11 |