Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378426.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1073548 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGCAATT | 65 | 1.4037141E-8 | 31.152973 | 32 |
| CGGGTCC | 30 | 0.0051478134 | 29.99916 | 23 |
| TCTCGTA | 70 | 2.8865543E-8 | 28.927765 | 41 |
| CTCGTAT | 65 | 4.874073E-7 | 27.691532 | 42 |
| AGACCGC | 65 | 4.874073E-7 | 27.691532 | 28 |
| TCGTATG | 70 | 9.308842E-7 | 25.713568 | 43 |
| CCGCAAT | 70 | 9.308842E-7 | 25.713568 | 31 |
| CGTATGC | 75 | 1.6978847E-6 | 23.99933 | 44 |
| AGCGGTT | 75 | 1.6978847E-6 | 23.99933 | 7 |
| GCGGTTC | 80 | 2.9751718E-6 | 22.49937 | 8 |
| ACCGCAA | 80 | 2.9751718E-6 | 22.49937 | 30 |
| GACCGCA | 85 | 5.0329163E-6 | 21.175879 | 29 |
| ATCTCGT | 95 | 1.3160166E-5 | 18.946838 | 40 |
| GAGACCG | 100 | 2.046923E-5 | 17.999496 | 27 |
| AAGAGCG | 115 | 3.4415007E-6 | 17.612305 | 4 |
| TGAGCCG | 195 | 3.45608E-11 | 17.307209 | 45 |
| CCGAGAC | 105 | 3.11286E-5 | 17.142378 | 25 |
| CGGTTCA | 110 | 4.638167E-5 | 16.363178 | 9 |
| CTTCGTT | 155 | 2.0608422E-7 | 15.971014 | 2 |
| TCGTTGG | 185 | 5.6024874E-9 | 15.814053 | 4 |