Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378374.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 548782 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 45 | 1.925946E-8 | 39.997974 | 42 |
| TCGTTGT | 25 | 0.0021066742 | 35.99818 | 41 |
| CGTATGC | 60 | 6.4228516E-9 | 33.748295 | 44 |
| TCTCGTA | 55 | 1.126391E-7 | 32.725616 | 41 |
| GAGCGGT | 65 | 1.39898475E-8 | 31.15795 | 6 |
| AGACCGA | 75 | 1.7007551E-9 | 29.998482 | 28 |
| AAGAGCG | 70 | 2.8716386E-8 | 28.93765 | 4 |
| AGCGGTT | 70 | 2.8767317E-8 | 28.932379 | 7 |
| GCGGTTC | 70 | 2.8792783E-8 | 28.929743 | 8 |
| CGGAAGA | 80 | 3.3724064E-9 | 28.136395 | 1 |
| ACCGAAC | 65 | 4.867725E-7 | 27.690907 | 30 |
| TCGTATG | 75 | 5.6306817E-8 | 26.998632 | 43 |
| CGAACAT | 70 | 9.2968E-7 | 25.712984 | 32 |
| GACCGAA | 70 | 9.2968E-7 | 25.712984 | 29 |
| CCGAACA | 70 | 9.2968E-7 | 25.712984 | 31 |
| AGAGCGG | 85 | 1.8874925E-7 | 23.826666 | 5 |
| AATGCCG | 120 | 4.5110937E-10 | 22.498863 | 21 |
| GAGACCG | 80 | 2.971361E-6 | 22.498863 | 27 |
| CCGAGAC | 80 | 2.971361E-6 | 22.498863 | 25 |
| CGGTTCA | 90 | 3.2820572E-7 | 22.498861 | 9 |