Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391224.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 871502 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTACCGC | 25 | 0.0021129306 | 35.978794 | 15 |
| ATCTTCG | 150 | 3.2923708E-10 | 19.564844 | 5 |
| TCGTATA | 140 | 3.105015E-9 | 19.27546 | 9 |
| CTTCGTA | 155 | 5.366019E-10 | 18.860935 | 7 |
| ACTAGAC | 370 | 0.0 | 18.84241 | 19 |
| TTCGTAT | 150 | 7.3050614E-9 | 17.99043 | 8 |
| CGTATAA | 160 | 1.6223566E-8 | 16.866028 | 10 |
| ACCACGC | 155 | 2.0768675E-7 | 15.959252 | 9 |
| CTCGTGA | 160 | 2.9746116E-7 | 15.4623 | 42 |
| TCTTCGT | 205 | 1.2551027E-9 | 15.41695 | 6 |
| AGTTCGA | 120 | 9.4665214E-5 | 15.051613 | 1 |
| CGGCTAA | 105 | 6.0618226E-4 | 14.991164 | 17 |
| TCGTGAT | 180 | 1.1266475E-6 | 13.7442665 | 43 |
| CCGGGCG | 155 | 5.6225246E-5 | 13.109469 | 1 |
| ACCTCGT | 155 | 5.829407E-5 | 13.059069 | 40 |
| GTTCGAG | 125 | 0.0021962775 | 12.64117 | 2 |
| TTCGAGA | 125 | 0.0021962775 | 12.64117 | 3 |
| CCTTCGT | 145 | 4.7081654E-4 | 12.456508 | 1 |
| CACCACG | 200 | 3.6811434E-6 | 12.368421 | 8 |
| TCTCGAT | 130 | 0.0030312422 | 12.109639 | 27 |