Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378186.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 7249042 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGGTTC | 285 | 0.0 | 16.577082 | 8 |
| CTCGTAT | 325 | 0.0 | 15.922494 | 42 |
| GACCGAA | 285 | 0.0 | 15.788677 | 29 |
| CGTATGC | 305 | 0.0 | 15.491236 | 44 |
| CCGGCTA | 950 | 0.0 | 15.15619 | 16 |
| CGGCTAA | 985 | 0.0 | 14.617645 | 17 |
| ACCCGGC | 515 | 0.0 | 13.979012 | 14 |
| ATCTTCG | 830 | 0.0 | 13.559707 | 5 |
| GAGCGGT | 390 | 0.0 | 13.274604 | 6 |
| CTTCGTA | 825 | 0.0 | 13.089437 | 7 |
| TCGTATA | 725 | 0.0 | 12.722707 | 9 |
| CGCCCGG | 585 | 0.0 | 12.690879 | 13 |
| CGGTTCA | 375 | 0.0 | 12.598583 | 9 |
| CCCGCCA | 760 | 0.0 | 12.439848 | 3 |
| CCCGGCT | 1205 | 0.0 | 11.762162 | 15 |
| CGCGATC | 290 | 1.3551471E-8 | 11.636621 | 15 |
| CGCCACC | 1070 | 0.0 | 11.570105 | 5 |
| ACCACGC | 1420 | 0.0 | 11.5656 | 9 |
| AGCGCTC | 725 | 0.0 | 11.481467 | 7 |
| ACCGCGC | 355 | 1.7462298E-10 | 11.407167 | 9 |