Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391380.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 928475 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGACACA | 30 | 0.005053285 | 30.11265 | 1 |
| ATCTTCG | 90 | 1.8132306E-4 | 17.564764 | 5 |
| ACTAGAC | 280 | 0.0 | 15.25998 | 19 |
| TCGTATA | 90 | 0.0037688003 | 14.990648 | 9 |
| TTCGTAT | 110 | 8.623259E-4 | 14.310025 | 8 |
| AACGGGA | 135 | 2.665117E-4 | 13.32502 | 12 |
| CGGGATT | 125 | 0.002261521 | 12.592145 | 14 |
| ACGGGAT | 145 | 4.8725036E-4 | 12.406052 | 13 |
| CGTTGGA | 175 | 1.7428285E-4 | 11.614251 | 5 |
| CTTCGTA | 140 | 0.0052772146 | 11.243591 | 7 |
| GGCGGAG | 140 | 0.0052772146 | 11.243591 | 31 |
| TCGTTGG | 185 | 2.9189634E-4 | 10.986454 | 4 |
| AGGCGGA | 175 | 0.0023486444 | 10.279856 | 30 |
| CTAGACA | 465 | 1.8189894E-11 | 10.156049 | 20 |
| GCCACCA | 635 | 0.0 | 9.957975 | 6 |
| ACCATGC | 435 | 5.7298166E-10 | 9.821459 | 9 |
| AGCCACC | 460 | 1.4006218E-10 | 9.818811 | 5 |
| AAACGGG | 210 | 9.761228E-4 | 9.636845 | 11 |
| CGTGAGC | 190 | 0.004476415 | 9.509258 | 1 |
| TTCGTTG | 215 | 0.0011637146 | 9.453461 | 3 |