Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391334.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 587034 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 35 | 2.8290914E-4 | 32.122715 | 42 |
| CCTGCGA | 30 | 0.0051631727 | 29.97865 | 34 |
| CGTATGC | 40 | 6.18515E-4 | 28.107376 | 44 |
| TCGTATG | 40 | 6.18515E-4 | 28.107376 | 43 |
| TCGTATA | 50 | 7.187279E-5 | 26.980782 | 9 |
| GATCGGA | 45 | 0.0012303268 | 24.984335 | 18 |
| TCTCGTA | 45 | 0.0012303268 | 24.984335 | 41 |
| ATCTTCG | 80 | 7.312595E-5 | 19.771166 | 5 |
| CGTATAA | 70 | 7.011409E-4 | 19.271988 | 10 |
| CTTCGTA | 60 | 0.006527163 | 18.739847 | 7 |
| AGCGCTC | 80 | 0.001715704 | 16.865864 | 7 |
| CGTGAGC | 85 | 0.002491635 | 15.949847 | 1 |
| GGAAACG | 115 | 0.001207021 | 13.6859045 | 9 |
| ACTAGAC | 215 | 4.0898158E-8 | 13.596127 | 19 |
| TATCTTC | 460 | 0.0 | 12.771436 | 4 |
| TCTTCGT | 125 | 0.0021787153 | 12.653546 | 6 |
| ACCACGC | 165 | 1.0481663E-4 | 12.263993 | 9 |
| GCCAAAC | 145 | 0.0068496712 | 10.855264 | 38 |
| GTAGTCC | 145 | 0.0068496712 | 10.855264 | 22 |
| GCACTCC | 220 | 1.3163062E-4 | 10.219994 | 16 |