Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378378.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1145597 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCCGCCA | 60 | 0.0065119797 | 18.749252 | 18 |
| GAATCGC | 180 | 6.874325E-8 | 14.999403 | 12 |
| GTCAACC | 90 | 0.0037549045 | 14.999403 | 35 |
| CCTTCGT | 145 | 3.091486E-5 | 13.971669 | 1 |
| GATCACG | 150 | 4.2720785E-5 | 13.499464 | 13 |
| TCGCTTG | 200 | 2.4911606E-7 | 13.499463 | 15 |
| AGAATCG | 200 | 2.4911606E-7 | 13.499463 | 11 |
| TCACGAG | 120 | 0.0016568983 | 13.124477 | 15 |
| AATCGCT | 210 | 4.5084926E-7 | 12.856631 | 13 |
| CGGGGTT | 195 | 2.7447786E-6 | 12.6979 | 1 |
| CGTTGGA | 160 | 7.8153644E-5 | 12.657404 | 5 |
| TCGTTGG | 180 | 1.6886248E-5 | 12.503323 | 4 |
| ATCGCTT | 240 | 1.7131606E-7 | 12.187015 | 14 |
| CGGGATT | 130 | 0.0030223893 | 12.1149025 | 14 |
| CGTGTTA | 130 | 0.0030223893 | 12.1149025 | 10 |
| AGTGGCG | 160 | 0.0011082556 | 11.249552 | 10 |
| CGCTTGA | 240 | 2.2617933E-6 | 11.249552 | 16 |
| CTCACGC | 325 | 6.0990715E-9 | 11.076483 | 14 |
| TCGATCT | 185 | 3.0228336E-4 | 10.94551 | 11 |
| GCGATCT | 165 | 0.0014331512 | 10.908658 | 16 |