Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378181.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1152602 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGGT | 200 | 0.0 | 40.497032 | 29 |
| CGTATGC | 215 | 0.0 | 38.718094 | 44 |
| CTCGTAT | 220 | 0.0 | 37.838135 | 42 |
| TCTCGTA | 225 | 0.0 | 35.99736 | 41 |
| TCGTATG | 240 | 0.0 | 34.68496 | 43 |
| CCGGTGA | 245 | 0.0 | 33.977104 | 31 |
| CGGTGAT | 260 | 0.0 | 32.882206 | 32 |
| GCGGTTC | 255 | 0.0 | 32.644665 | 8 |
| GAGACCG | 250 | 0.0 | 32.39763 | 27 |
| CGGTTCA | 265 | 0.0 | 32.261787 | 9 |
| ACCGGTG | 260 | 0.0 | 32.016884 | 30 |
| AGACCGG | 255 | 0.0 | 31.762377 | 28 |
| ATCTCGT | 260 | 0.0 | 31.151564 | 40 |
| GTATGCC | 260 | 0.0 | 31.151564 | 45 |
| CGGAAGA | 280 | 0.0 | 30.557339 | 1 |
| AGAGCGG | 275 | 0.0 | 30.283648 | 5 |
| GAGCGGT | 280 | 0.0 | 29.742867 | 6 |
| AGCGGTT | 290 | 0.0 | 28.704792 | 7 |
| CCGAGAC | 300 | 0.0 | 27.747967 | 25 |
| GATCGGA | 75 | 5.6432327E-8 | 26.998022 | 18 |