Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378268.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1239102 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGATCGG | 75 | 4.7293724E-11 | 32.99941 | 32 |
| TCGTATG | 80 | 1.0004442E-10 | 30.936945 | 43 |
| CGCCGCT | 30 | 0.005145832 | 30.001883 | 6 |
| ACGCTGT | 30 | 0.005147863 | 29.999462 | 9 |
| CGTATGC | 85 | 2.0372681E-10 | 29.117125 | 44 |
| CCGATCG | 85 | 2.0372681E-10 | 29.117125 | 31 |
| TCTCGTA | 95 | 2.3646862E-11 | 28.420544 | 41 |
| GACCGAT | 90 | 3.965397E-10 | 27.499506 | 29 |
| TCGGAAT | 100 | 1.3460522E-9 | 24.749556 | 35 |
| GAGCGGT | 110 | 1.5097612E-10 | 24.546995 | 6 |
| GCGGTTC | 105 | 2.3683242E-9 | 23.571005 | 8 |
| ACCGATC | 105 | 2.3683242E-9 | 23.571005 | 30 |
| CTCGTAT | 110 | 4.0545274E-9 | 22.499598 | 42 |
| CGGTTCA | 110 | 4.0545274E-9 | 22.499598 | 9 |
| CGGAATC | 120 | 1.1055818E-8 | 20.62463 | 36 |
| GATCGGA | 120 | 1.1055818E-8 | 20.62463 | 33 |
| AGACCGA | 120 | 1.1055818E-8 | 20.62463 | 28 |
| ATCGGAA | 120 | 1.1055818E-8 | 20.62463 | 34 |
| AGCGGTT | 125 | 1.7671482E-8 | 19.800446 | 7 |
| ATCTCGT | 125 | 1.7680577E-8 | 19.799646 | 40 |