Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391228.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 633865 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 45 | 3.502371E-5 | 29.982437 | 41 |
| CGCCCGG | 70 | 2.8983777E-8 | 28.911634 | 13 |
| CCGTTTG | 50 | 7.178137E-5 | 26.986319 | 31 |
| CTCGTAT | 50 | 7.181992E-5 | 26.98419 | 42 |
| TCGTATG | 50 | 7.181992E-5 | 26.98419 | 43 |
| CGTATGC | 55 | 1.3727027E-4 | 24.531084 | 44 |
| CGTATAA | 55 | 1.3727027E-4 | 24.531084 | 10 |
| AAACGGA | 65 | 1.5283369E-5 | 24.21849 | 22 |
| AGACCGT | 60 | 2.4742863E-4 | 22.488602 | 28 |
| ATCTCGT | 60 | 2.475608E-4 | 22.486828 | 40 |
| CATCTCG | 75 | 4.619248E-5 | 20.987705 | 39 |
| GACCGTT | 65 | 4.2498513E-4 | 20.758707 | 29 |
| ACGCCCG | 55 | 0.003947988 | 20.44257 | 12 |
| GAGACCG | 70 | 7.0025795E-4 | 19.275944 | 27 |
| CAAACGG | 60 | 0.0065264124 | 18.740501 | 21 |
| TCGTATA | 75 | 0.001113845 | 17.989462 | 9 |
| CGGAGGT | 90 | 1.8712475E-4 | 17.491135 | 33 |
| GAGCGGT | 80 | 0.0016707268 | 16.933243 | 6 |
| CGTTTGA | 80 | 0.0017155085 | 16.866451 | 32 |
| TGCCGAG | 80 | 0.0017155085 | 16.866451 | 23 |