Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378256.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1073252 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 35 | 2.820511E-4 | 32.142357 | 41 |
| CTCGTAT | 40 | 6.166437E-4 | 28.124563 | 42 |
| CGTATGC | 55 | 0.0039367243 | 20.45423 | 44 |
| CCGAGAC | 95 | 2.8194705E-4 | 16.57869 | 25 |
| AGATCGC | 85 | 0.002565282 | 15.882107 | 27 |
| CGGAAGA | 90 | 0.0037459566 | 15.00466 | 1 |
| GAATCGC | 125 | 1.3804997E-4 | 14.3997755 | 12 |
| CGTGAAC | 95 | 0.0053762603 | 14.210305 | 18 |
| AACGGGT | 95 | 0.0053762603 | 14.210305 | 12 |
| AATGCCG | 100 | 0.007551362 | 13.499791 | 21 |
| AGAATCG | 150 | 4.2706124E-5 | 13.499791 | 11 |
| AACCCGG | 185 | 1.5276419E-6 | 13.378171 | 22 |
| GAACCCG | 210 | 4.5062734E-7 | 12.856943 | 21 |
| ACCCGGG | 210 | 4.5062734E-7 | 12.856943 | 23 |
| CCGTGTT | 125 | 0.002251613 | 12.599803 | 11 |
| CGGAGGT | 135 | 0.0040072524 | 11.666486 | 33 |
| CCTTCGT | 155 | 8.469451E-4 | 11.61651 | 1 |
| CGTGAGC | 195 | 3.8307637E-5 | 11.5420475 | 1 |
| AAACGGG | 280 | 1.0360782E-7 | 11.2498255 | 11 |
| CGGCTAA | 160 | 0.0011079314 | 11.2498255 | 41 |