Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378244.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1480654 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TGCCGTC | 185 | 0.0 | 34.056763 | 45 |
| TATGCCG | 190 | 0.0 | 33.160534 | 43 |
| ATGCCGT | 195 | 0.0 | 32.310265 | 44 |
| AGATCGG | 115 | 9.094947E-12 | 25.433369 | 25 |
| ATGCCGA | 395 | 0.0 | 23.922722 | 19 |
| ATCGGAA | 135 | 3.6379788E-12 | 23.332039 | 27 |
| AATGCCG | 405 | 0.0 | 23.332037 | 18 |
| GATCGGA | 140 | 5.456968E-12 | 22.498749 | 26 |
| GACCGAT | 280 | 0.0 | 21.695223 | 26 |
| CGATTAG | 295 | 0.0 | 21.354746 | 29 |
| GCGGTTC | 450 | 0.0 | 21.003088 | 5 |
| TGCCGAG | 455 | 0.0 | 20.76808 | 20 |
| GAGACCG | 295 | 0.0 | 20.592077 | 24 |
| GAGCGGT | 460 | 0.0 | 20.547888 | 3 |
| AGACCGA | 300 | 0.0 | 20.248877 | 25 |
| CCGATTA | 305 | 0.0 | 19.916925 | 28 |
| AGAGCGG | 485 | 0.0 | 19.48872 | 2 |
| AGCGGTT | 485 | 0.0 | 19.487404 | 4 |
| ACCGATT | 315 | 0.0 | 19.284643 | 27 |
| CGGTTCA | 500 | 0.0 | 18.902779 | 6 |