Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378299.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1095897 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 45 | 3.4919787E-5 | 29.998388 | 44 |
| ATCGTAG | 30 | 0.0051485086 | 29.998386 | 33 |
| GAGCGGT | 55 | 4.160531E-6 | 28.640053 | 6 |
| CTCGTAT | 60 | 2.4683052E-4 | 22.498789 | 42 |
| GGGCGAC | 75 | 4.6042886E-5 | 20.99887 | 28 |
| GCGGTTC | 80 | 7.560405E-5 | 19.688238 | 8 |
| GACCGAG | 70 | 6.985711E-4 | 19.284678 | 29 |
| TCTCGTA | 70 | 6.985711E-4 | 19.284678 | 41 |
| AGACCGA | 70 | 6.985711E-4 | 19.284678 | 28 |
| CCGAGAC | 70 | 6.985711E-4 | 19.284678 | 25 |
| TTGCGCC | 60 | 0.00650547 | 18.752415 | 6 |
| ATCTCGT | 85 | 1.2048723E-4 | 18.528416 | 40 |
| ACCGAGG | 85 | 1.2048723E-4 | 18.528416 | 30 |
| CGGTTCA | 100 | 2.0474394E-5 | 17.999033 | 9 |
| TCGTATG | 75 | 0.001110579 | 17.999033 | 43 |
| AGAGCGA | 115 | 3.4501372E-6 | 17.60775 | 35 |
| AGAGCGG | 80 | 0.0017093027 | 16.877174 | 5 |
| AGCGGTT | 80 | 0.0017103468 | 16.875633 | 7 |
| CGAGGAA | 80 | 0.0017113915 | 16.874092 | 32 |
| ATGCCGA | 80 | 0.0017113915 | 16.874092 | 22 |