Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378303.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 937519 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGGT | 35 | 6.248174E-6 | 38.570423 | 29 |
| ATCGGTG | 25 | 0.0021071807 | 35.99906 | 23 |
| AGACCGG | 45 | 8.699426E-7 | 34.99909 | 28 |
| ACCGGTT | 45 | 3.4907862E-5 | 29.999218 | 30 |
| TCTCGTA | 45 | 3.4907862E-5 | 29.999218 | 41 |
| GCGTCAG | 30 | 0.0051474357 | 29.999218 | 22 |
| CGCCAAT | 30 | 0.0051474357 | 29.999218 | 19 |
| TCGTATG | 50 | 7.1582865E-5 | 26.999296 | 43 |
| CGTATGC | 60 | 8.1910985E-6 | 26.249315 | 44 |
| GCGGTTC | 65 | 4.238175E-4 | 20.768688 | 8 |
| CGGTTTA | 65 | 4.238175E-4 | 20.768688 | 32 |
| GATGTCG | 55 | 0.0039366 | 20.454012 | 25 |
| AGAGCGG | 80 | 7.559515E-5 | 19.688036 | 5 |
| ATGCCGA | 80 | 7.562614E-5 | 19.686987 | 22 |
| AGCGGTT | 70 | 6.98338E-4 | 19.285212 | 7 |
| CGATATT | 60 | 0.006510601 | 18.749512 | 11 |
| AAGAGCG | 85 | 1.2019205E-4 | 18.533873 | 4 |
| CGGAAGA | 75 | 0.0011082251 | 18.004332 | 1 |
| GAGCGGT | 75 | 0.0011098131 | 18.00049 | 6 |
| CTCGTAT | 75 | 0.0011102104 | 17.999529 | 42 |