Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378264.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 948251 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 45 | 1.9281288E-8 | 39.99911 | 42 |
| GACCGGC | 30 | 0.0051473705 | 29.99933 | 12 |
| TCTCGTA | 70 | 2.8856448E-8 | 28.927927 | 41 |
| CGTATGC | 70 | 9.306459E-7 | 25.713713 | 44 |
| AGACCGA | 70 | 9.306459E-7 | 25.713713 | 28 |
| GACCGAC | 75 | 1.6974536E-6 | 23.999466 | 29 |
| GCGGTTC | 80 | 2.9744187E-6 | 22.499498 | 8 |
| CGACAGG | 80 | 2.9744187E-6 | 22.499498 | 32 |
| TATCTCG | 80 | 2.9744187E-6 | 22.499498 | 39 |
| CCGAGAC | 80 | 2.9744187E-6 | 22.499498 | 25 |
| ACCGACA | 95 | 5.530801E-7 | 21.315313 | 30 |
| AGCGGTT | 95 | 5.530801E-7 | 21.315313 | 7 |
| CCGACAG | 90 | 8.250336E-6 | 19.999556 | 31 |
| AAGAGCG | 95 | 1.3132969E-5 | 18.950943 | 4 |
| GAGACCG | 95 | 1.31568795E-5 | 18.946945 | 27 |
| TCGTATG | 95 | 1.31568795E-5 | 18.946945 | 43 |
| GCGATCT | 85 | 1.2043644E-4 | 18.529 | 16 |
| ATGCCGA | 110 | 2.2556123E-6 | 18.408682 | 22 |
| CGGAAGA | 100 | 2.0408503E-5 | 18.005295 | 1 |
| AATGCCG | 100 | 2.0464136E-5 | 17.9996 | 21 |