Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378411.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 908012 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TATCTCG | 65 | 9.094947E-12 | 38.07576 | 39 |
| GACCGGC | 80 | 3.6379788E-12 | 33.748966 | 29 |
| ACCGGCT | 75 | 4.7293724E-11 | 32.998993 | 30 |
| CTCGTAT | 75 | 4.7293724E-11 | 32.998993 | 42 |
| AGACCGG | 75 | 4.7293724E-11 | 32.998993 | 28 |
| CGTATGC | 80 | 1.0004442E-10 | 30.936552 | 44 |
| CGGCTAT | 80 | 1.0004442E-10 | 30.936552 | 32 |
| TCTCGTA | 90 | 3.965397E-10 | 27.499159 | 41 |
| TCTCTCG | 45 | 0.0012265749 | 24.999235 | 13 |
| GAGCGGT | 100 | 1.3442332E-9 | 24.74924 | 6 |
| TGCCGAG | 110 | 1.5097612E-10 | 24.544703 | 23 |
| AAGAGCG | 105 | 2.3592293E-9 | 23.5772 | 4 |
| GCGGTTC | 105 | 2.3665052E-9 | 23.570707 | 8 |
| CGGTTCA | 105 | 2.3665052E-9 | 23.570707 | 9 |
| AGCGGTT | 105 | 2.3665052E-9 | 23.570707 | 7 |
| TCGTATG | 105 | 2.3665052E-9 | 23.570707 | 43 |
| CGGAAGA | 110 | 4.0254236E-9 | 22.51171 | 1 |
| ATCTCGT | 110 | 4.0508894E-9 | 22.499311 | 40 |
| AGAGCGG | 115 | 6.7666406E-9 | 21.52108 | 5 |
| GAGACCG | 120 | 1.1048542E-8 | 20.62437 | 27 |