Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378273.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1269836 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 70 | 8.1490725E-10 | 32.142605 | 44 |
| CTCGTAT | 70 | 2.886918E-8 | 28.928343 | 42 |
| TCTCGTA | 80 | 1.0540498E-7 | 25.312302 | 41 |
| ACGCCCG | 70 | 2.7042686E-5 | 22.498936 | 12 |
| GCGGTTC | 90 | 3.2890057E-7 | 22.498936 | 8 |
| ATGCCGA | 90 | 3.2890057E-7 | 22.498936 | 22 |
| AGCGGTT | 95 | 5.535185E-7 | 21.314783 | 7 |
| CGTTTGG | 65 | 4.2399194E-4 | 20.768251 | 31 |
| GACCGTG | 100 | 9.06055E-7 | 20.249044 | 29 |
| CGTATAA | 105 | 1.4464676E-6 | 19.284803 | 10 |
| CGGTTCA | 105 | 1.4464676E-6 | 19.284803 | 9 |
| AATGCCG | 105 | 1.4464676E-6 | 19.284803 | 21 |
| AGACCGT | 105 | 1.4464676E-6 | 19.284803 | 28 |
| GAGCGGT | 110 | 2.2539807E-6 | 18.411121 | 6 |
| TCGTATG | 110 | 2.2565273E-6 | 18.408947 | 43 |
| CGGAAGA | 115 | 3.4352724E-6 | 17.616186 | 1 |
| CCGAGAC | 115 | 3.4507957E-6 | 17.607862 | 25 |
| TCGTATA | 120 | 5.176289E-6 | 16.874203 | 9 |
| AGAGCGG | 125 | 7.619443E-6 | 16.201786 | 5 |
| GAGACCG | 125 | 7.6308515E-6 | 16.199234 | 27 |