Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378280.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1217971 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATCGTGC | 90 | 3.2844946E-7 | 22.50197 | 5 |
| CTCGTAT | 55 | 0.003937483 | 20.453817 | 42 |
| CGGTGAT | 55 | 0.003937483 | 20.453817 | 18 |
| GACCGCT | 60 | 0.0065120505 | 18.749332 | 29 |
| AGATCGT | 115 | 3.440733E-6 | 17.613129 | 3 |
| GATCGTG | 105 | 3.1059488E-5 | 17.147173 | 4 |
| CGCTCCT | 80 | 0.0017113317 | 16.8744 | 32 |
| TCGTGCC | 110 | 4.634404E-5 | 16.365068 | 6 |
| ATCTCGT | 90 | 0.0037549816 | 14.999466 | 40 |
| CCTTCGT | 165 | 6.889317E-6 | 13.640358 | 1 |
| CGTGAGC | 205 | 3.351306E-7 | 13.17459 | 1 |
| TGAGCCG | 295 | 9.640644E-11 | 12.96564 | 45 |
| CGACAGA | 165 | 1.0433435E-4 | 12.27229 | 31 |
| GCGACAG | 130 | 0.003022482 | 12.114954 | 30 |
| CAACGAA | 155 | 8.4896665E-4 | 11.613443 | 7 |
| AACCCGG | 165 | 0.0014332146 | 10.908702 | 22 |
| CCAACGA | 145 | 0.00682051 | 10.86302 | 6 |
| ACCCGGG | 145 | 0.0068267565 | 10.861683 | 23 |
| ACCCGGC | 145 | 0.0068267565 | 10.861683 | 14 |
| GCTAGAC | 210 | 8.177044E-5 | 10.713903 | 18 |