Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391244.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 812836 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA | 4832 | 0.5944618594648859 | No Hit |
| TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA | 3755 | 0.46196280676544843 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTCGGTA | 420 | 0.0 | 43.385147 | 22 |
| TAAGCCG | 540 | 0.0 | 42.909042 | 13 |
| TCGGTAT | 425 | 0.0 | 42.874733 | 23 |
| CGTCATA | 540 | 0.0 | 42.49245 | 24 |
| CGGTATT | 430 | 0.0 | 42.376186 | 24 |
| GGCGGTC | 435 | 0.0 | 41.889107 | 35 |
| CGATGAC | 550 | 0.0 | 41.71986 | 18 |
| AGCCGAT | 545 | 0.0 | 41.68984 | 15 |
| GACGTCA | 555 | 0.0 | 41.344006 | 22 |
| CCGATGA | 560 | 0.0 | 40.97486 | 17 |
| AAGCCGA | 560 | 0.0 | 40.97486 | 14 |
| ATTCGGT | 445 | 0.0 | 40.947777 | 21 |
| GCCGATG | 555 | 0.0 | 40.93867 | 16 |
| TGACGTC | 565 | 0.0 | 40.61225 | 21 |
| ACGTCAT | 565 | 0.0 | 40.61225 | 23 |
| ATGACGT | 560 | 0.0 | 40.573147 | 20 |
| AGGCGGT | 455 | 0.0 | 40.542248 | 34 |
| GAATTCG | 450 | 0.0 | 40.4928 | 19 |
| TATGCCG | 90 | 0.0 | 39.992893 | 43 |
| CCTCGGG | 430 | 0.0 | 39.760372 | 12 |