Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378302.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 856477 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 40 | 1.5593982E-5 | 33.75223 | 41 |
| GACCGTT | 45 | 3.4896308E-5 | 30.000233 | 29 |
| CGTATGC | 50 | 7.153083E-5 | 27.001787 | 44 |
| CTCGTAT | 50 | 7.153083E-5 | 27.001787 | 42 |
| GAGACCG | 55 | 1.3677328E-4 | 24.545645 | 27 |
| ATCTTCG | 85 | 5.0293984E-6 | 21.176636 | 5 |
| CGGTTCA | 65 | 4.2384613E-4 | 20.76818 | 9 |
| TGAGCCG | 170 | 3.6379788E-12 | 19.854256 | 45 |
| ACCGTTT | 70 | 6.981112E-4 | 19.285866 | 30 |
| CGTATAA | 110 | 2.255705E-6 | 18.40816 | 10 |
| CGGAAGA | 75 | 0.0011072451 | 18.006447 | 1 |
| GAGCGGT | 75 | 0.0011098515 | 18.00014 | 6 |
| AGACCGT | 75 | 0.0011098515 | 18.00014 | 28 |
| CTTCGTA | 100 | 2.0465366E-5 | 17.999088 | 7 |
| TCGTATG | 80 | 0.0017096077 | 16.876116 | 43 |
| AGAGCGG | 80 | 0.0017102758 | 16.875132 | 5 |
| GCGGTTC | 80 | 0.001710944 | 16.874146 | 8 |
| TCGCTTG | 125 | 7.6252763E-6 | 16.19918 | 15 |
| TCGTATA | 125 | 7.6252763E-6 | 16.19918 | 9 |
| ATCGCTT | 155 | 2.0654079E-7 | 15.966935 | 14 |