Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378294.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 949117 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGGCTA | 95 | 5.531001E-7 | 21.31524 | 16 |
| CGGCTAA | 95 | 1.3157296E-5 | 18.94688 | 17 |
| AATATCG | 60 | 0.006500752 | 18.754457 | 2 |
| ACGGGTT | 60 | 0.006510647 | 18.749517 | 13 |
| ACCACGC | 130 | 5.7815305E-7 | 17.307245 | 9 |
| CGCCCGG | 85 | 0.0025651632 | 15.881945 | 13 |
| CCTCGTG | 130 | 1.1062555E-5 | 15.576521 | 23 |
| CCTTCGT | 145 | 1.8014689E-6 | 15.522566 | 1 |
| GCCCGGC | 175 | 4.861431E-8 | 15.428174 | 14 |
| TCGTTGG | 205 | 1.3114914E-9 | 15.368697 | 4 |
| GCGTGAT | 105 | 6.0366665E-4 | 14.999613 | 14 |
| CGTTGGA | 170 | 5.8827027E-7 | 14.5592165 | 5 |
| TTCGTTG | 210 | 2.9791408E-8 | 13.931148 | 3 |
| CGGGATT | 115 | 0.0012017414 | 13.6953 | 14 |
| CGCCCGC | 100 | 0.0075326283 | 13.504633 | 1 |
| CCACGCC | 150 | 4.2700034E-5 | 13.499653 | 10 |
| ACCTCGT | 135 | 2.6517606E-4 | 13.33299 | 22 |
| ACTAGAC | 390 | 0.0 | 12.691981 | 19 |
| TCGTGAT | 160 | 7.8211786E-5 | 12.655924 | 25 |
| CCAACGA | 125 | 0.0022505627 | 12.600339 | 6 |