Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378269.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1281188 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 60 | 2.4202745E-7 | 29.998697 | 44 |
| CTCGTAT | 85 | 1.8948049E-7 | 23.822495 | 42 |
| GCGGTTC | 85 | 1.8948049E-7 | 23.822495 | 8 |
| ACCGAGT | 85 | 1.8948049E-7 | 23.822495 | 30 |
| GAGCGGT | 80 | 2.972285E-6 | 22.502537 | 6 |
| AGCGGTT | 80 | 2.9753082E-6 | 22.4999 | 7 |
| TATCTCG | 80 | 2.9753082E-6 | 22.4999 | 39 |
| TCGTATG | 85 | 5.0348444E-6 | 21.17555 | 43 |
| GACCGAG | 110 | 9.990981E-8 | 20.453657 | 29 |
| TCTCGTA | 100 | 9.06035E-7 | 20.24912 | 41 |
| CGGTTCA | 115 | 3.4507175E-6 | 17.607931 | 9 |
| AGACCGA | 105 | 3.114032E-5 | 17.142115 | 28 |
| ATGCCGA | 120 | 5.1761726E-6 | 16.874268 | 22 |
| CCGAGAC | 110 | 4.639906E-5 | 16.362926 | 25 |
| TCGTATA | 140 | 1.2555374E-6 | 16.070732 | 9 |
| AATGCCG | 115 | 6.7859866E-5 | 15.651494 | 21 |
| ATCTTCG | 165 | 4.1955172E-7 | 15.001691 | 5 |
| CTTCGTA | 165 | 4.2010834E-7 | 14.999935 | 7 |
| CGCCACC | 230 | 4.2382453E-10 | 14.675568 | 5 |
| ATCTCGT | 125 | 1.380698E-4 | 14.399938 | 40 |