Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378283.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1083436 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATAC | 30 | 0.00514824 | 29.998678 | 32 |
| GAGCGGT | 40 | 6.16085E-4 | 28.12895 | 6 |
| GCGGTTC | 45 | 0.0012264946 | 25.000051 | 8 |
| AATGCCG | 45 | 0.0012268246 | 24.998898 | 21 |
| ATCTCGT | 70 | 2.703729E-5 | 22.499008 | 40 |
| TCTCGTA | 50 | 0.0022651074 | 22.499006 | 41 |
| ACCGCAA | 55 | 0.0039373995 | 20.453644 | 30 |
| CTTCGTT | 205 | 0.0 | 19.763435 | 2 |
| CGGTTCA | 60 | 0.0065119187 | 18.749174 | 9 |
| CGGGATT | 180 | 1.0913936E-11 | 18.749172 | 14 |
| GACCGCA | 85 | 1.2047674E-4 | 18.528595 | 29 |
| TTCGTTG | 270 | 0.0 | 18.337603 | 3 |
| TCGTATA | 140 | 6.478149E-8 | 17.677792 | 9 |
| TCGTTGG | 245 | 0.0 | 17.453043 | 4 |
| CGTTGGA | 235 | 0.0 | 17.236464 | 5 |
| ACGGGAT | 170 | 1.8299033E-9 | 17.205124 | 13 |
| CCTTCGT | 240 | 0.0 | 16.883606 | 1 |
| AACGGGA | 200 | 5.0931703E-11 | 16.874256 | 12 |
| CGTATAA | 150 | 1.4232137E-7 | 16.499271 | 10 |
| TTCGTAT | 165 | 4.199028E-7 | 15.0000305 | 8 |