Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391212.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1173098 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCGGA | 45 | 3.5031633E-5 | 29.984596 | 26 |
| AGCGGAT | 30 | 0.0051602423 | 29.984596 | 27 |
| AGATCGG | 50 | 7.183589E-5 | 26.986137 | 25 |
| ATGCCGA | 70 | 9.346113E-7 | 25.702179 | 19 |
| ATCGGAA | 55 | 1.3730033E-4 | 24.532852 | 27 |
| TCGGAAG | 80 | 2.988132E-6 | 22.48845 | 28 |
| AACGGGT | 55 | 0.0039492864 | 20.443172 | 12 |
| AATGCCG | 95 | 1.3212224E-5 | 18.938448 | 18 |
| TGCCGAG | 100 | 2.0550013E-5 | 17.991526 | 20 |
| AGAGCGG | 105 | 3.0236819E-5 | 17.200777 | 2 |
| CGGAAGA | 95 | 2.8304808E-4 | 16.570436 | 29 |
| TCGTATA | 95 | 2.831401E-4 | 16.56973 | 9 |
| GCGGTTC | 110 | 4.5055927E-5 | 16.418922 | 5 |
| AGCGCTC | 105 | 6.0625194E-4 | 14.99166 | 7 |
| CCGGCTA | 185 | 9.677751E-8 | 14.58648 | 16 |
| AGCGGTT | 140 | 2.1601536E-5 | 14.513156 | 4 |
| TCGCCAG | 95 | 0.0053959694 | 14.202625 | 16 |
| GGGGGGC | 95 | 0.0053959694 | 14.202625 | 37 |
| GCGCTCC | 115 | 0.0012068595 | 13.688037 | 8 |
| CGGTTCA | 135 | 2.5773616E-4 | 13.378383 | 6 |