Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378381.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1139489 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGGTAT | 30 | 0.0051481477 | 29.998919 | 44 |
| CGCGCCC | 70 | 6.9871783E-4 | 19.28417 | 11 |
| GCGCCCG | 85 | 1.20516794E-4 | 18.527931 | 12 |
| CGCCCGG | 125 | 7.631839E-6 | 16.198704 | 13 |
| ATCTTCG | 115 | 6.774339E-5 | 15.654358 | 5 |
| CTTCGTA | 115 | 6.77688E-5 | 15.65367 | 7 |
| CGTTGGA | 180 | 6.859227E-8 | 15.002092 | 5 |
| TCGTTGG | 185 | 9.574251E-8 | 14.599193 | 4 |
| CTTCGTT | 170 | 5.8636397E-7 | 14.56405 | 2 |
| TTCGTAT | 125 | 1.3813742E-4 | 14.398849 | 8 |
| TCGTATA | 125 | 1.3813742E-4 | 14.398849 | 9 |
| CCTTCGT | 160 | 4.9937807E-6 | 14.071255 | 1 |
| CCCGCCA | 100 | 0.007535246 | 13.504253 | 3 |
| GGCGTGT | 100 | 0.00755496 | 13.49892 | 11 |
| CGTATAA | 135 | 2.653709E-4 | 13.332267 | 10 |
| TTCGTTG | 215 | 5.9715967E-7 | 12.562096 | 3 |
| TGAGCCG | 205 | 4.827636E-6 | 12.072735 | 45 |
| GGAAACG | 245 | 2.2409222E-7 | 11.937821 | 9 |
| CCGGCTA | 135 | 0.0040094424 | 11.665733 | 16 |
| CGTGAGC | 155 | 8.4480346E-4 | 11.620133 | 1 |