Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391367.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1028082 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 25 | 0.0021119753 | 35.982723 | 41 |
| GATCGGA | 65 | 4.895119E-7 | 27.67767 | 18 |
| ATCGGAA | 70 | 9.3489507E-7 | 25.700695 | 19 |
| TCGGAAG | 65 | 1.5297986E-5 | 24.217962 | 20 |
| AGATCGG | 75 | 1.706625E-6 | 23.984982 | 17 |
| ATGCCCG | 85 | 5.0587078E-6 | 21.16322 | 12 |
| ATCTCGT | 70 | 7.005375E-4 | 19.276459 | 40 |
| CGGTTCA | 90 | 1.873688E-4 | 17.489899 | 29 |
| CCGAGAC | 105 | 3.124752E-5 | 17.13463 | 45 |
| CCGGCTA | 175 | 2.7102942E-9 | 16.703825 | 16 |
| AAGAGCG | 110 | 4.6577843E-5 | 16.354988 | 24 |
| GAGCGGT | 100 | 4.1863945E-4 | 15.740144 | 26 |
| CGGGATT | 130 | 1.112746E-5 | 15.567174 | 14 |
| TCGTTGG | 135 | 1.5273687E-5 | 15.055047 | 4 |
| CGGCTAA | 195 | 1.1355951E-8 | 14.990614 | 17 |
| AGCGGTT | 105 | 6.064828E-4 | 14.990613 | 27 |
| CCCGGCT | 225 | 3.074092E-10 | 14.990613 | 15 |
| CGCCCGG | 90 | 0.0037692243 | 14.990613 | 13 |
| AGAGCGG | 105 | 6.064828E-4 | 14.990613 | 25 |
| ACCACGC | 185 | 9.682117E-8 | 14.585462 | 9 |