Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378272.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1064848 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 35 | 6.247097E-6 | 38.57211 | 42 |
| CGTATGC | 40 | 1.5602704E-5 | 33.7506 | 44 |
| GAGCGGT | 40 | 1.5602704E-5 | 33.7506 | 6 |
| CGGTATG | 40 | 1.5602704E-5 | 33.7506 | 32 |
| AAGAGCG | 50 | 7.1570495E-5 | 27.000477 | 4 |
| ACCGGTA | 55 | 1.3679458E-4 | 24.54589 | 30 |
| TCGTATG | 55 | 1.3679458E-4 | 24.54589 | 43 |
| GACCGGT | 60 | 2.467048E-4 | 22.500399 | 29 |
| CCGGTAT | 60 | 2.467048E-4 | 22.500399 | 31 |
| AGACCGG | 75 | 4.6015964E-5 | 21.000372 | 28 |
| TCTCGTA | 65 | 4.237442E-4 | 20.769598 | 41 |
| ACCGTGC | 65 | 4.237442E-4 | 20.769598 | 2 |
| ATCTCGT | 80 | 7.5613E-5 | 19.687849 | 40 |
| AGCGGTT | 70 | 6.9821754E-4 | 19.286055 | 7 |
| AGAGCGG | 70 | 6.9821754E-4 | 19.286055 | 5 |
| GAGACCG | 85 | 1.2041718E-4 | 18.52974 | 27 |
| GCGGTTC | 80 | 0.0017110683 | 16.874506 | 8 |
| ATGCCGA | 85 | 0.0025654992 | 15.881889 | 22 |
| ACCACGC | 265 | 1.8189894E-12 | 15.282572 | 9 |
| CGTTGGA | 200 | 1.5723344E-8 | 14.625258 | 5 |