Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391336.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 781473 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCGGA | 50 | 1.987437E-6 | 31.48598 | 18 |
| TATCTCG | 45 | 3.498519E-5 | 29.988567 | 39 |
| GACGCTT | 30 | 0.0051558632 | 29.988564 | 42 |
| ATCGGAA | 55 | 4.1771436E-6 | 28.623615 | 19 |
| AGATCGG | 60 | 8.227766E-6 | 26.233278 | 17 |
| CTGCGAA | 45 | 0.0012303073 | 24.985674 | 33 |
| TCGGAAG | 65 | 1.5281998E-5 | 24.219984 | 20 |
| CGTATGC | 70 | 2.7068507E-5 | 22.494305 | 44 |
| CTCGTAT | 70 | 2.7095291E-5 | 22.491425 | 42 |
| ATCTCGT | 65 | 4.2474706E-4 | 20.761314 | 40 |
| TCTCGTA | 80 | 7.581219E-5 | 19.679996 | 41 |
| AGACCGG | 70 | 7.0077094E-4 | 19.274664 | 28 |
| ACCGGCT | 75 | 0.0011140675 | 17.989685 | 30 |
| GACCGGC | 75 | 0.0011140675 | 17.989685 | 29 |
| CGGCTTA | 75 | 0.0011140675 | 17.989685 | 32 |
| CGCCCGG | 90 | 1.87382E-4 | 17.488852 | 13 |
| CGCCACC | 155 | 1.0435542E-8 | 17.478714 | 5 |
| TCGTATG | 80 | 0.0017145505 | 16.868568 | 43 |
| GAGACCG | 80 | 0.0017174898 | 16.86425 | 27 |
| CGGGATT | 120 | 5.2002742E-6 | 16.86425 | 14 |