Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391189.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1024729 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA | 4796 | 0.4680261805804266 | No Hit |
| TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA | 3282 | 0.3202798008058716 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCCGATG | 490 | 0.0 | 42.24458 | 16 |
| AGCCGAT | 500 | 0.0 | 41.84968 | 15 |
| TGACGTC | 525 | 0.0 | 41.57111 | 21 |
| CGTCATA | 530 | 0.0 | 40.75441 | 24 |
| CGATGAC | 520 | 0.0 | 40.672768 | 18 |
| ATGACGT | 540 | 0.0 | 40.41636 | 20 |
| CCGATGA | 525 | 0.0 | 40.285408 | 17 |
| TAAGCCG | 525 | 0.0 | 39.85684 | 13 |
| GATGACG | 550 | 0.0 | 38.863342 | 19 |
| ACGTCAT | 560 | 0.0 | 38.571136 | 23 |
| AAGCCGA | 550 | 0.0 | 38.045166 | 14 |
| GGCGGTC | 415 | 0.0 | 37.951523 | 35 |
| TCGGTAT | 415 | 0.0 | 37.951523 | 23 |
| GACGTCA | 575 | 0.0 | 37.56493 | 22 |
| AGATCGG | 120 | 0.0 | 37.499718 | 25 |
| TTCCTCG | 360 | 0.0 | 37.499714 | 10 |
| GCGGTCT | 435 | 0.0 | 36.20662 | 36 |
| ATTCGGT | 435 | 0.0 | 36.20662 | 21 |
| AGGCGGT | 435 | 0.0 | 36.20662 | 34 |
| TTCGGTA | 435 | 0.0 | 36.20662 | 22 |