Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391214.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 898790 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACACCCG | 60 | 0.0065332074 | 18.738155 | 12 |
| CGGCTAA | 180 | 6.918708E-8 | 14.990523 | 17 |
| CGGGTGT | 95 | 0.0052361093 | 14.266632 | 1 |
| AGTCTCG | 95 | 0.0052399943 | 14.265038 | 4 |
| CCGGCTA | 160 | 5.0561957E-6 | 14.053616 | 16 |
| ATCGTGC | 100 | 0.0073605203 | 13.551785 | 5 |
| CGCCACC | 150 | 6.242359E-4 | 12.046032 | 5 |
| CCTAGTG | 135 | 0.0040248795 | 11.659296 | 35 |
| GTCTCGC | 140 | 0.0051067984 | 11.293154 | 5 |
| ACGGGGT | 180 | 2.3543724E-4 | 11.2441435 | 44 |
| TGAGCCG | 220 | 1.0647444E-5 | 11.2441435 | 45 |
| ACTAGAC | 320 | 4.818503E-9 | 11.243518 | 19 |
| GACGGGG | 205 | 6.432207E-5 | 10.969286 | 43 |
| AGTGGCG | 170 | 0.0018464588 | 10.581546 | 10 |
| GCGATTC | 175 | 0.0023486451 | 10.279788 | 42 |
| GGCGGAG | 200 | 6.234686E-4 | 10.119166 | 31 |
| AGCGATT | 180 | 0.002966925 | 9.994239 | 41 |
| CGATTCT | 190 | 0.0046387375 | 9.468226 | 43 |
| CGCTTGA | 195 | 0.0057479413 | 9.224938 | 16 |
| AGACGGG | 245 | 3.8868847E-4 | 9.178382 | 42 |