Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391376.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 916686 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGATCG | 35 | 1.2170676E-7 | 44.97409 | 31 |
| GACGATC | 25 | 0.0020702053 | 36.129047 | 1 |
| ATCGTTA | 45 | 8.7366425E-7 | 34.979847 | 34 |
| CGATCGT | 45 | 8.7366425E-7 | 34.979847 | 32 |
| GACCGAT | 50 | 1.9899635E-6 | 31.481863 | 29 |
| AGACCGA | 50 | 1.9899635E-6 | 31.481863 | 28 |
| ACCGATC | 55 | 4.1824333E-6 | 28.619877 | 30 |
| CGTTATC | 55 | 4.1824333E-6 | 28.619877 | 36 |
| AGCGACA | 45 | 0.0012304896 | 24.985605 | 11 |
| CTCGTAT | 65 | 1.5294765E-5 | 24.21814 | 42 |
| GAGCGGT | 70 | 2.6285352E-5 | 22.580654 | 6 |
| GCGGTTC | 70 | 2.7108408E-5 | 22.490725 | 8 |
| TCTCGTA | 70 | 2.713127E-5 | 22.488272 | 41 |
| TCGTATG | 70 | 2.713127E-5 | 22.488272 | 43 |
| CGGAAGA | 85 | 4.876816E-6 | 21.25238 | 1 |
| TATCTCG | 85 | 5.05553E-6 | 21.164276 | 39 |
| CGGTTCA | 75 | 4.6198504E-5 | 20.989054 | 9 |
| CGTTGGA | 130 | 1.1732482E-9 | 20.843681 | 5 |
| AGAGCGG | 80 | 7.355717E-5 | 19.758072 | 5 |
| CGTATGC | 80 | 7.5912205E-5 | 19.677238 | 44 |