Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391391.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 704779 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AATCGGT | 25 | 0.002111912 | 35.981377 | 42 |
| CTCGTAT | 40 | 1.5652464E-5 | 33.732544 | 42 |
| TCGTATG | 40 | 1.5652464E-5 | 33.732544 | 43 |
| CGTATGC | 45 | 3.501288E-5 | 29.984484 | 44 |
| TCTCGTA | 45 | 3.501288E-5 | 29.984484 | 41 |
| CGCGCCC | 40 | 6.187568E-4 | 28.106464 | 11 |
| AGACCGG | 50 | 7.186712E-5 | 26.982204 | 28 |
| GCTGCGG | 45 | 0.0011970815 | 25.10285 | 1 |
| ACCGCGC | 45 | 0.0012308044 | 24.983526 | 9 |
| CCGGCAC | 55 | 1.3736013E-4 | 24.529278 | 31 |
| GACCGGC | 55 | 1.3736013E-4 | 24.529278 | 29 |
| CGGCACA | 55 | 1.3736013E-4 | 24.529278 | 32 |
| ACCGGCA | 65 | 1.5304582E-5 | 24.2148 | 30 |
| GATCGGA | 60 | 2.4760328E-4 | 22.486767 | 18 |
| ATCTCGT | 65 | 4.250804E-4 | 20.758488 | 40 |
| AGATCGG | 65 | 4.2548773E-4 | 20.755543 | 17 |
| CCGCGCC | 55 | 0.0039501027 | 20.441065 | 10 |
| CACCGCG | 55 | 0.0039501027 | 20.441065 | 8 |
| GTATGCC | 85 | 0.0025727078 | 15.874139 | 45 |
| ATCGGAA | 85 | 0.0025739262 | 15.873013 | 19 |