Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391370.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 971690 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 50 | 4.901267E-8 | 35.980198 | 41 |
| CTCGTAT | 70 | 2.9007424E-8 | 28.912659 | 42 |
| GATCGGA | 180 | 0.0 | 28.735666 | 18 |
| ATCGGAA | 175 | 0.0 | 28.27161 | 19 |
| AGATCGG | 185 | 0.0 | 26.740662 | 17 |
| CGTATGC | 70 | 9.3498056E-7 | 25.700142 | 44 |
| TCGGAAG | 200 | 0.0 | 24.737658 | 20 |
| TCGTATG | 75 | 1.7053408E-6 | 23.9868 | 43 |
| CCGAGAC | 245 | 0.0 | 23.864418 | 45 |
| CCGTTGC | 90 | 3.303321E-7 | 22.487625 | 31 |
| GACCGTT | 95 | 5.55925E-7 | 21.304064 | 29 |
| ATCTCGT | 85 | 5.0549206E-6 | 21.164822 | 40 |
| ACCGTTG | 85 | 5.0549206E-6 | 21.164822 | 30 |
| AGCGGTT | 255 | 0.0 | 21.163733 | 27 |
| CGGAAGA | 235 | 0.0 | 21.053326 | 21 |
| CCGCGCC | 75 | 4.619409E-5 | 20.98953 | 10 |
| GCGGTTC | 260 | 0.0 | 20.757807 | 28 |
| GGCGACA | 65 | 4.253344E-4 | 20.757807 | 29 |
| AGAGCGG | 260 | 0.0 | 20.756737 | 25 |
| AAGAGCG | 265 | 0.0 | 20.367197 | 24 |