Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391333.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 738194 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 40 | 6.1827374E-4 | 28.110435 | 42 |
| TCTCGTA | 50 | 7.180257E-5 | 26.98602 | 41 |
| CGGTTCT | 45 | 0.0012298465 | 24.987055 | 16 |
| TCGTATA | 85 | 1.9012259E-7 | 23.811193 | 9 |
| CGTATGC | 60 | 2.4738754E-4 | 22.489872 | 44 |
| GACCGTT | 50 | 0.0022706718 | 22.48835 | 29 |
| CCGTTGT | 50 | 0.0022706718 | 22.48835 | 31 |
| ATCTCGT | 65 | 4.2510833E-4 | 20.758478 | 40 |
| GCGGTTC | 65 | 4.2510833E-4 | 20.758478 | 8 |
| CGTATAA | 110 | 1.00266334E-7 | 20.443954 | 10 |
| AAGACGG | 55 | 0.003947046 | 20.443954 | 8 |
| CATCTCG | 55 | 0.003947046 | 20.443954 | 39 |
| CTTCGTA | 100 | 9.0909816E-7 | 20.239515 | 7 |
| AGCGGTT | 70 | 7.0046E-4 | 19.275728 | 7 |
| TCGTATG | 70 | 7.0046E-4 | 19.275728 | 43 |
| CGTTGTA | 60 | 0.0065278304 | 18.740292 | 32 |
| TTCGTAT | 120 | 2.5072586E-7 | 18.740292 | 8 |
| TCGTTGG | 150 | 6.9576345E-9 | 18.060411 | 4 |
| CGGTTCA | 75 | 0.0011135752 | 17.99068 | 9 |
| CCTTCGT | 140 | 6.223672E-8 | 17.737904 | 1 |