Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378393.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1042410 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 35 | 6.248598E-6 | 38.57065 | 42 |
| ACCGTTC | 50 | 1.981698E-6 | 31.499361 | 30 |
| TCTCGTA | 45 | 3.491019E-5 | 29.999392 | 41 |
| GACCGTT | 50 | 7.158758E-5 | 26.999453 | 29 |
| CGTTCAC | 50 | 7.158758E-5 | 26.999453 | 32 |
| GAGACCG | 55 | 1.3682713E-4 | 24.544958 | 27 |
| AGACCGT | 55 | 1.3682713E-4 | 24.544958 | 28 |
| CCGTTCA | 55 | 1.3682713E-4 | 24.544958 | 31 |
| GCGGTTC | 70 | 2.704106E-5 | 22.498465 | 8 |
| CGGTTCA | 75 | 4.6045265E-5 | 20.998568 | 9 |
| TCGTATG | 65 | 4.238446E-4 | 20.76881 | 43 |
| CGTGAGC | 165 | 1.8189894E-12 | 20.462965 | 1 |
| TACGGAG | 55 | 0.0039312914 | 20.459038 | 4 |
| GAGCGGT | 85 | 1.2031633E-4 | 18.531704 | 6 |
| ATCTCGT | 85 | 1.2044916E-4 | 18.529036 | 40 |
| AGCGGTT | 75 | 0.0011095657 | 18.001362 | 7 |
| CGTATGC | 75 | 0.0011102803 | 17.999634 | 44 |
| CGGGATT | 125 | 3.835121E-7 | 17.998774 | 14 |
| CGGAGGT | 140 | 1.2546861E-6 | 16.071104 | 33 |
| GCGGAGG | 155 | 2.0659536E-7 | 15.96742 | 32 |