Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378260.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 670700 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGCTA | 35 | 2.8191874E-4 | 32.14275 | 30 |
| CGCTAAG | 35 | 2.8191874E-4 | 32.14275 | 32 |
| CCGCTAA | 45 | 3.4887777E-5 | 29.9999 | 31 |
| TCGTATG | 40 | 6.163565E-4 | 28.124907 | 43 |
| GAGCGGT | 45 | 0.0012260457 | 24.999918 | 6 |
| AGACCGC | 45 | 0.0012260457 | 24.999918 | 28 |
| TCTCGTA | 50 | 0.002263678 | 22.499924 | 41 |
| GCGGTTC | 55 | 0.0039349296 | 20.454477 | 8 |
| GACCGCT | 55 | 0.0039349296 | 20.454477 | 29 |
| CCGGCTA | 80 | 7.557197E-5 | 19.687435 | 16 |
| GTATGCC | 70 | 6.979474E-4 | 19.28565 | 45 |
| CTCGTAT | 60 | 0.0065078596 | 18.749939 | 42 |
| AGCGGTT | 60 | 0.0065078596 | 18.749939 | 7 |
| CCGAGAC | 60 | 0.0065078596 | 18.749939 | 25 |
| GCCACCG | 85 | 1.20352226E-4 | 18.529352 | 6 |
| CCACCGC | 80 | 0.0017098803 | 16.874945 | 7 |
| CGTGAGC | 125 | 7.6115157E-6 | 16.201155 | 1 |
| CGGCTAA | 85 | 0.0025637276 | 15.882301 | 17 |
| GCCCGGC | 115 | 0.0012008944 | 13.695606 | 14 |
| ATCTCGG | 140 | 3.6030673E-4 | 12.8571005 | 19 |