Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378407.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 895368 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGGTC | 100 | 0.0 | 33.749035 | 30 |
| GACCGGT | 100 | 0.0 | 33.749035 | 29 |
| CGTATGC | 105 | 0.0 | 32.14194 | 44 |
| TATCTCG | 105 | 0.0 | 32.14194 | 39 |
| CCGGTCA | 105 | 0.0 | 32.14194 | 31 |
| TCTCGTA | 110 | 0.0 | 30.680943 | 41 |
| CGGTTGT | 30 | 0.005147377 | 29.999144 | 26 |
| CTCGTAT | 115 | 0.0 | 29.346987 | 42 |
| ATCTCGT | 120 | 0.0 | 28.124197 | 40 |
| AGACCGG | 125 | 0.0 | 26.999231 | 28 |
| CGGTCAT | 130 | 0.0 | 25.960798 | 32 |
| GAGACCG | 140 | 0.0 | 25.713552 | 27 |
| TCGTATG | 135 | 0.0 | 24.999287 | 43 |
| AGAGCGG | 140 | 0.0 | 24.110495 | 5 |
| CCGAGAC | 140 | 0.0 | 24.106457 | 25 |
| CGGAAGA | 155 | 0.0 | 23.229036 | 1 |
| GGGTGCG | 50 | 0.0022616598 | 22.504385 | 3 |
| TGGCGCG | 60 | 2.467395E-4 | 22.499357 | 12 |
| GGCGCGA | 50 | 0.0022645977 | 22.499357 | 13 |
| GTATGCC | 155 | 1.8189894E-12 | 21.773573 | 45 |