Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378138.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1007036 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGACTA | 140 | 0.0 | 36.962406 | 31 |
| GCGCTGA | 25 | 0.0021075099 | 35.998173 | 39 |
| CGACTAC | 145 | 0.0 | 35.687843 | 32 |
| GACCGAC | 150 | 0.0 | 34.496536 | 29 |
| ACCGACT | 150 | 0.0 | 34.496536 | 30 |
| CGTATGC | 155 | 0.0 | 33.3854 | 44 |
| TCTCGTA | 155 | 0.0 | 33.3854 | 41 |
| ATCTCGT | 160 | 0.0 | 32.342106 | 40 |
| TATCTCG | 165 | 0.0 | 31.362045 | 39 |
| AGACCGA | 165 | 0.0 | 31.360487 | 28 |
| TCGTATG | 175 | 0.0 | 30.855574 | 43 |
| CTCGTAT | 170 | 0.0 | 30.439632 | 42 |
| CGGATAC | 30 | 0.005134501 | 30.014872 | 4 |
| GAGACCG | 190 | 0.0 | 27.234108 | 27 |
| GATCGGA | 75 | 5.6432327E-8 | 26.997288 | 18 |
| AGATCGG | 85 | 6.486516E-9 | 26.467932 | 17 |
| TTTCGCC | 70 | 9.265477E-7 | 25.727032 | 6 |
| CCGAGAC | 195 | 0.0 | 25.382067 | 25 |
| ATCGGAA | 80 | 1.0545409E-7 | 25.309958 | 19 |
| AAGAGCG | 205 | 0.0 | 25.256416 | 4 |