Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378252.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 2045008 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CACCGCG | 115 | 6.788055E-5 | 15.651792 | 8 |
| ACCGCGC | 120 | 9.760098E-5 | 14.999634 | 9 |
| CGTTGGA | 365 | 0.0 | 14.795244 | 5 |
| CCTTCGT | 325 | 0.0 | 14.542728 | 1 |
| TTCGTTG | 385 | 0.0 | 14.028375 | 3 |
| ACGGGAT | 245 | 1.0968506E-9 | 13.775174 | 13 |
| TCGTTGG | 380 | 0.0 | 13.620419 | 4 |
| AAAGCGC | 310 | 1.6370905E-11 | 13.065154 | 5 |
| CTTCGTT | 350 | 0.0 | 12.8593445 | 2 |
| CGGGATT | 265 | 3.5433914E-9 | 12.735538 | 14 |
| AAGCGCT | 335 | 6.366463E-11 | 12.090143 | 6 |
| TGAGCCG | 440 | 0.0 | 11.761364 | 45 |
| AGCGCTC | 195 | 3.8469057E-5 | 11.538462 | 7 |
| AAACGGG | 465 | 0.0 | 11.12876 | 11 |
| CTCCGTC | 230 | 1.7346298E-5 | 10.761396 | 5 |
| GAAACGG | 440 | 5.456968E-12 | 10.738373 | 10 |
| GACTCCG | 190 | 3.863569E-4 | 10.659719 | 3 |
| GCGCTCC | 215 | 1.03872764E-4 | 10.46486 | 8 |
| GTAGTCC | 495 | 0.0 | 10.45429 | 22 |
| GCCACCG | 280 | 1.2575765E-6 | 10.446939 | 6 |