Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391335.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 956980 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGAC | 40 | 6.1863585E-4 | 28.108671 | 29 |
| AGATCGG | 60 | 8.230021E-6 | 26.23339 | 17 |
| CGTATGC | 45 | 0.0012305633 | 24.985487 | 44 |
| CGACTTA | 45 | 0.0012305633 | 24.985487 | 32 |
| GATCGGA | 70 | 2.7145325E-5 | 22.486937 | 18 |
| TCGGAAG | 85 | 5.056125E-6 | 21.164175 | 20 |
| ATCGGAA | 75 | 4.6222332E-5 | 20.987808 | 19 |
| CTCGTAT | 65 | 4.2541555E-4 | 20.757174 | 42 |
| AAAGCGC | 120 | 1.05646905E-8 | 20.704987 | 5 |
| GCGGATC | 80 | 7.5920805E-5 | 19.6771 | 24 |
| ACCGACT | 60 | 0.006531578 | 18.739115 | 30 |
| TCGTATG | 75 | 0.0011143722 | 17.98955 | 43 |
| AAGCGCT | 140 | 6.1923856E-8 | 17.747131 | 6 |
| GGCGGAT | 90 | 1.8735658E-4 | 17.489841 | 23 |
| CGGATCA | 80 | 0.0017172217 | 16.865204 | 25 |
| GGGCGGA | 80 | 0.0017172217 | 16.865204 | 22 |
| TCTCGTA | 80 | 0.0017172217 | 16.865204 | 41 |
| AGCGCTC | 120 | 5.202526E-6 | 16.864323 | 7 |
| ACGCCCG | 85 | 0.0025755982 | 15.872302 | 12 |
| GCCACCG | 165 | 4.017529E-7 | 15.058171 | 6 |