Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391344.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 777218 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCGGA | 70 | 2.8987415E-8 | 28.913021 | 18 |
| AGATCGG | 85 | 6.511982E-9 | 26.45636 | 17 |
| AGCGCTC | 85 | 1.9006802E-7 | 23.812256 | 7 |
| ATCGGAA | 95 | 5.55563E-7 | 21.304333 | 19 |
| CGCCCGG | 75 | 4.6192676E-5 | 20.988712 | 13 |
| ACGCCCG | 80 | 7.590275E-5 | 19.676918 | 12 |
| ATCTTCG | 105 | 1.3989848E-6 | 19.350039 | 5 |
| ACCACGC | 225 | 0.0 | 18.989786 | 9 |
| GCGCTCC | 95 | 1.3203133E-5 | 18.938402 | 8 |
| CGGCTAA | 135 | 4.2931788E-8 | 18.323477 | 17 |
| GCGGTTC | 115 | 3.4613477E-6 | 17.600363 | 28 |
| GAGCGGT | 115 | 3.4613477E-6 | 17.600363 | 26 |
| CCACGCC | 205 | 3.6379788E-12 | 17.551537 | 10 |
| CCGGCTA | 130 | 5.809252E-7 | 17.29839 | 16 |
| AGCGGTT | 120 | 5.192096E-6 | 16.867014 | 27 |
| AGAGCGG | 125 | 7.654124E-6 | 16.192335 | 25 |
| TCGGAAG | 125 | 7.658802E-6 | 16.191292 | 20 |
| GAAAGCG | 85 | 0.0025078135 | 15.935327 | 4 |
| TCGTATA | 85 | 0.002573377 | 15.873816 | 9 |
| CTTCGTA | 100 | 4.179899E-4 | 15.742546 | 7 |