Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378396.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1115272 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGCTTA | 45 | 8.703755E-7 | 34.99787 | 31 |
| CGTATGC | 50 | 1.9824893E-6 | 31.498087 | 44 |
| TCTCGTA | 55 | 4.1667627E-6 | 28.634623 | 41 |
| AGACCGC | 55 | 4.1667627E-6 | 28.634623 | 28 |
| GCGGTTC | 60 | 8.192277E-6 | 26.249582 | 8 |
| CTCGTAT | 70 | 9.3120616E-7 | 25.712723 | 42 |
| GACCGCT | 65 | 1.52441535E-5 | 24.229298 | 29 |
| CGCTTAC | 65 | 1.52441535E-5 | 24.229298 | 32 |
| TCGTATG | 70 | 2.7041691E-5 | 22.498632 | 43 |
| AATGCCG | 85 | 5.034639E-6 | 21.175182 | 21 |
| ATGCGAT | 55 | 0.0039378516 | 20.453302 | 27 |
| AAGAGCG | 100 | 9.0169124E-7 | 20.25876 | 4 |
| GGCGCAA | 60 | 0.006512664 | 18.74886 | 13 |
| ATCTCGT | 85 | 1.2045478E-4 | 18.529116 | 40 |
| ACCGCTT | 85 | 1.2049619E-4 | 18.528284 | 30 |
| CCGAGAC | 100 | 2.0476165E-5 | 17.998907 | 25 |
| GAGCGGT | 90 | 1.8639241E-4 | 17.502075 | 6 |
| AGCGGTT | 90 | 1.8658425E-4 | 17.499722 | 7 |
| CGGCTAA | 130 | 5.785878E-7 | 17.306643 | 17 |
| ACGGGAT | 135 | 8.587285E-7 | 16.665655 | 13 |