Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378247.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1396392 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTTGCGT | 30 | 0.005148435 | 29.999043 | 34 |
| TGGCGGA | 45 | 0.0012269143 | 24.999205 | 36 |
| GATCGCA | 80 | 7.555928E-5 | 19.6904 | 4 |
| ATCGCAC | 70 | 6.980946E-4 | 19.28717 | 5 |
| ATTACGT | 60 | 0.006512379 | 18.749401 | 12 |
| ACCCGGC | 120 | 9.75719E-5 | 14.999521 | 14 |
| CTTCGTT | 170 | 5.8733167E-7 | 14.562531 | 2 |
| AGATCGC | 140 | 2.2267932E-5 | 14.466933 | 3 |
| CGTTGGA | 235 | 5.857146E-10 | 14.362789 | 5 |
| TCGTTGG | 240 | 8.021743E-10 | 14.064569 | 4 |
| CCTTCGT | 195 | 1.819335E-7 | 13.852658 | 1 |
| AAGATCG | 130 | 1.9224366E-4 | 13.849681 | 2 |
| ATCGCTT | 245 | 1.0968506E-9 | 13.775071 | 14 |
| TTCGTTG | 290 | 7.2759576E-11 | 13.192071 | 3 |
| CGGAGGT | 190 | 2.0629504E-6 | 13.025901 | 33 |
| ACTAGAC | 470 | 0.0 | 12.92512 | 19 |
| CGGGATT | 175 | 1.268352E-5 | 12.856733 | 14 |
| TCGCTTG | 215 | 5.999991E-7 | 12.55774 | 15 |
| GCCACCG | 310 | 3.6039637E-8 | 10.887919 | 6 |
| GAATCGC | 190 | 3.8691657E-4 | 10.657556 | 12 |