Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378306.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 989382 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 45 | 0.0012264743 | 24.99986 | 41 |
| ACGCCCG | 55 | 1.3685363E-4 | 24.544075 | 12 |
| GACCGGA | 50 | 0.0022644629 | 22.499872 | 29 |
| ACCGGAA | 55 | 0.003936285 | 20.45443 | 30 |
| CTCGTAT | 55 | 0.003936285 | 20.45443 | 42 |
| CGGCTAA | 105 | 1.445931E-6 | 19.28463 | 17 |
| AGACCGG | 60 | 0.0065100826 | 18.749895 | 28 |
| TCGTATG | 60 | 0.0065100826 | 18.749895 | 43 |
| CTTCGTA | 85 | 1.2047445E-4 | 18.52837 | 7 |
| ATCTCGT | 100 | 2.0462661E-5 | 17.999899 | 40 |
| GTGCGAT | 75 | 0.0011104931 | 17.99899 | 14 |
| CCGAGAC | 90 | 1.865426E-4 | 17.499903 | 25 |
| CCGGCTA | 105 | 3.113215E-5 | 17.141893 | 16 |
| CGGAAAG | 80 | 0.0017106821 | 16.874905 | 32 |
| GGTGCGA | 80 | 0.0017112606 | 16.874052 | 13 |
| CGGTTCA | 90 | 0.0037548319 | 14.999157 | 9 |
| CACGCCC | 140 | 2.2305263E-5 | 14.463473 | 11 |
| TGGTGCG | 95 | 0.005377317 | 14.209728 | 12 |
| GCCCGGC | 225 | 4.8967195E-9 | 13.999214 | 14 |
| CGCCCGG | 130 | 1.9266183E-4 | 13.845376 | 13 |