Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378291.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1066368 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGTTA | 50 | 1.9819727E-6 | 31.498919 | 30 |
| GACCGTT | 60 | 8.193012E-6 | 26.249096 | 29 |
| TCGTATG | 60 | 8.193012E-6 | 26.249096 | 43 |
| GCGGTTC | 55 | 1.3679957E-4 | 24.545763 | 8 |
| CGTATGC | 55 | 1.3684313E-4 | 24.544611 | 44 |
| CGTTAAA | 55 | 1.3684313E-4 | 24.544611 | 32 |
| CCGTTAA | 55 | 1.3684313E-4 | 24.544611 | 31 |
| CTCGTAT | 65 | 1.524023E-5 | 24.229937 | 42 |
| AGACCGT | 65 | 1.524023E-5 | 24.229937 | 28 |
| TGCCGAG | 60 | 2.467922E-4 | 22.499224 | 23 |
| ATGCCGA | 70 | 6.9846335E-4 | 19.28505 | 22 |
| GGGGACG | 60 | 0.006511489 | 18.749353 | 30 |
| CGGTTCA | 75 | 0.0011104081 | 17.999382 | 9 |
| GAGACCG | 75 | 0.0011104081 | 17.999382 | 27 |
| TCTCGTA | 75 | 0.0011104081 | 17.999382 | 41 |
| ATCTCGT | 80 | 0.0017105925 | 16.87521 | 40 |
| AGCGGTT | 80 | 0.0017105925 | 16.87521 | 7 |
| GAGCGGT | 80 | 0.0017105925 | 16.87521 | 6 |
| CCCGCCA | 160 | 2.9572402E-7 | 15.47112 | 3 |
| CGCCCGC | 120 | 9.7228185E-5 | 15.005113 | 1 |