Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378383.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 993826 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 60 | 2.4179826E-7 | 30.000635 | 41 |
| AGCGGTT | 65 | 1.5232308E-5 | 24.231283 | 7 |
| GAGCGGT | 65 | 1.5232308E-5 | 24.231283 | 6 |
| CTCGTAT | 80 | 2.973533E-6 | 22.500479 | 42 |
| GACCGCT | 80 | 2.9748335E-6 | 22.499346 | 29 |
| AGACCGC | 80 | 2.9748335E-6 | 22.499346 | 28 |
| TATCTCG | 75 | 4.6010726E-5 | 21.000446 | 39 |
| AGAGCGG | 75 | 4.6010726E-5 | 21.000446 | 5 |
| ACCGCTT | 75 | 4.602857E-5 | 20.999392 | 30 |
| AACGGGT | 55 | 0.003936832 | 20.45395 | 12 |
| CGTATGC | 80 | 7.557525E-5 | 19.68891 | 44 |
| CCGCTTG | 80 | 7.5633725E-5 | 19.686928 | 31 |
| CGGAAGA | 105 | 1.4427842E-6 | 19.289036 | 1 |
| CCTTCGT | 130 | 2.7655915E-8 | 19.041739 | 1 |
| ATCTCGT | 115 | 3.447014E-6 | 17.60907 | 40 |
| AAGAGCG | 90 | 1.8636188E-4 | 17.502132 | 4 |
| GCGGTTC | 90 | 1.8657713E-4 | 17.49949 | 8 |
| CGGTTCA | 95 | 2.8194976E-4 | 16.578466 | 9 |
| TCGTATG | 100 | 4.1656592E-4 | 15.750335 | 43 |
| CGTTGGA | 160 | 2.9610783E-7 | 15.469079 | 5 |