Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378430.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1071270 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTCGTTA | 50 | 1.0822987E-9 | 40.49958 | 33 |
| ACCGTCG | 55 | 2.748493E-9 | 36.8178 | 30 |
| CTCGTAT | 60 | 6.4319465E-9 | 33.749653 | 42 |
| TCGTATG | 60 | 6.4319465E-9 | 33.749653 | 43 |
| CGTCGTT | 60 | 6.4319465E-9 | 33.749653 | 32 |
| CCGTCGT | 65 | 1.4035322E-8 | 31.153522 | 31 |
| TCGTTAA | 70 | 2.8861905E-8 | 28.92827 | 34 |
| CGTATGC | 70 | 2.8861905E-8 | 28.92827 | 44 |
| AGACCGT | 70 | 2.8861905E-8 | 28.92827 | 28 |
| CGTTAAT | 80 | 3.3960532E-9 | 28.12471 | 35 |
| AATGCCG | 75 | 5.6415956E-8 | 26.998459 | 21 |
| ATCTCGT | 80 | 1.05375875E-7 | 25.312239 | 40 |
| CGGTTCA | 90 | 1.19162E-8 | 24.998573 | 9 |
| GACCGTC | 85 | 1.8935862E-7 | 23.823282 | 29 |
| GAGACCG | 100 | 3.6441634E-8 | 22.499767 | 27 |
| CGAGGAC | 50 | 0.0022652608 | 22.498716 | 18 |
| GCGGTTC | 115 | 1.596054E-7 | 19.5641 | 8 |
| AAGAGCG | 105 | 1.4429406E-6 | 19.289116 | 4 |
| TGCCGAG | 105 | 1.4455254E-6 | 19.285513 | 23 |
| AGCGGTT | 105 | 1.4461712E-6 | 19.284615 | 7 |