Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391243.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 753957 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA | 4343 | 0.5760275453374663 | No Hit |
| TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA | 2839 | 0.37654667308613093 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGATGAC | 415 | 0.0 | 43.370747 | 18 |
| TGACGTC | 435 | 0.0 | 41.37669 | 21 |
| GATGACG | 440 | 0.0 | 40.906498 | 19 |
| CGTCATA | 440 | 0.0 | 40.906498 | 24 |
| CCGATGA | 440 | 0.0 | 40.903786 | 17 |
| AGCCGAT | 435 | 0.0 | 40.856773 | 15 |
| AAGCCGA | 435 | 0.0 | 40.856773 | 14 |
| GCCGATG | 435 | 0.0 | 40.3396 | 16 |
| TAAGCCG | 435 | 0.0 | 40.3396 | 13 |
| ATGACGT | 455 | 0.0 | 39.557934 | 20 |
| AATTCGG | 450 | 0.0 | 39.497494 | 20 |
| TCCTCGG | 395 | 0.0 | 39.314342 | 11 |
| TTCCTCG | 400 | 0.0 | 38.822914 | 10 |
| GACGTCA | 465 | 0.0 | 38.707222 | 22 |
| TTCGGTA | 460 | 0.0 | 38.638855 | 22 |
| TCGGTAT | 460 | 0.0 | 38.638855 | 23 |
| ACGTCAT | 470 | 0.0 | 38.29545 | 23 |
| GCGGTCT | 460 | 0.0 | 38.14723 | 36 |
| CGGTATT | 470 | 0.0 | 37.816753 | 24 |
| GGCGGTC | 470 | 0.0 | 37.335587 | 35 |