Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378431.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 977364 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCCCGTA | 30 | 0.0051473724 | 29.999422 | 27 |
| CGGACAA | 45 | 0.0012265615 | 24.999517 | 32 |
| CCGGACA | 45 | 0.0012265615 | 24.999517 | 31 |
| TCGTATG | 55 | 1.3677022E-4 | 24.546236 | 43 |
| CTCGTAT | 50 | 0.0022639502 | 22.500717 | 42 |
| TCTCGTA | 50 | 0.0022639502 | 22.500717 | 41 |
| ACCGGAC | 50 | 0.0022646233 | 22.499565 | 30 |
| ATCGCAC | 55 | 0.003931899 | 20.458336 | 5 |
| ACGCCAT | 55 | 0.0039377296 | 20.453104 | 17 |
| CGCCACC | 165 | 6.002665E-11 | 19.094448 | 5 |
| TCGCACC | 60 | 0.006502853 | 18.753475 | 6 |
| GACCGGA | 60 | 0.0065105413 | 18.74964 | 29 |
| GAGACCG | 75 | 0.0011102055 | 17.999651 | 27 |
| AGCGCTC | 75 | 0.0011102055 | 17.999651 | 7 |
| CGTATAA | 75 | 0.0011105868 | 17.998732 | 10 |
| CACGCCC | 110 | 4.6391713E-5 | 16.362484 | 11 |
| GAGCGGT | 85 | 0.0025616265 | 15.885298 | 6 |
| CCACGCC | 190 | 7.998096E-9 | 15.393652 | 10 |
| CGCTCCA | 105 | 6.0389424E-4 | 14.998942 | 9 |
| GCGCTCC | 90 | 0.003755146 | 14.998942 | 8 |