Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378304.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1057819 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGCACGA | 35 | 2.8201044E-4 | 32.143093 | 36 |
| ACCGCAC | 60 | 0.006511661 | 18.749252 | 9 |
| TCGTATA | 80 | 0.0017111802 | 16.874327 | 9 |
| CGCCACC | 150 | 2.572835E-6 | 15.00011 | 5 |
| CGTGAGC | 245 | 6.91216E-11 | 14.69885 | 1 |
| CGGCTAA | 110 | 8.59014E-4 | 14.317611 | 17 |
| ACCACGC | 205 | 2.177876E-8 | 14.267723 | 9 |
| CCACGCC | 235 | 9.0185495E-9 | 13.40372 | 10 |
| CACCACG | 265 | 3.5361154E-9 | 12.735341 | 8 |
| TCGGCTC | 245 | 2.2391578E-7 | 11.938298 | 22 |
| CGCCTGG | 170 | 1.3780732E-4 | 11.911289 | 13 |
| CCACCGC | 160 | 0.001108134 | 11.249551 | 7 |
| GTGGTAG | 165 | 0.0014329962 | 10.908655 | 7 |
| CCTGTAC | 145 | 0.006806813 | 10.865744 | 1 |
| CGCTCCA | 145 | 0.006825975 | 10.861635 | 9 |
| GCCCGGC | 170 | 0.0018378451 | 10.587812 | 14 |
| TCCAACG | 260 | 5.893671E-6 | 10.384692 | 5 |
| AACGAAA | 220 | 1.3096559E-4 | 10.226865 | 8 |
| CCAACGA | 265 | 7.396484E-6 | 10.188755 | 6 |
| GCCACCG | 200 | 6.203239E-4 | 10.125074 | 6 |