Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391223.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 724635 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGTATG | 60 | 6.4646883E-9 | 33.728832 | 43 |
| GACCGTT | 60 | 6.4683263E-9 | 33.726505 | 29 |
| CGTATGC | 65 | 1.4097168E-8 | 31.136454 | 44 |
| CTCGTAT | 65 | 1.4106263E-8 | 31.134308 | 42 |
| CCCCGAA | 30 | 0.005034199 | 30.135073 | 1 |
| TATCTCG | 75 | 5.671245E-8 | 26.981205 | 39 |
| TCTCGTA | 80 | 1.0590884E-7 | 25.296623 | 41 |
| TTCGTAT | 65 | 1.5309754E-5 | 24.213902 | 8 |
| TCGTATA | 65 | 1.5309754E-5 | 24.213902 | 9 |
| CTTCGTA | 75 | 1.7065122E-6 | 23.983294 | 7 |
| AGACCGT | 95 | 2.1283995E-8 | 23.66772 | 28 |
| ATCTCGT | 100 | 3.6639904E-8 | 22.485888 | 40 |
| CGTATAA | 70 | 2.7157817E-5 | 22.484337 | 10 |
| CCTTCGT | 105 | 5.8169462E-8 | 21.525053 | 1 |
| GATCGGA | 65 | 4.2561023E-4 | 20.754774 | 18 |
| GAGACCG | 100 | 9.1060974E-7 | 20.235903 | 27 |
| ACCGTTT | 100 | 9.1060974E-7 | 20.235903 | 30 |
| CGTTTCT | 110 | 2.268689E-6 | 18.396275 | 32 |
| CTTCGTT | 125 | 3.6520214E-7 | 18.081043 | 2 |
| GTATGCC | 125 | 3.8508733E-7 | 17.989952 | 45 |