Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378401.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 901555 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 85 | 0.0 | 37.057953 | 44 |
| TCGTATG | 90 | 0.0 | 34.99918 | 43 |
| TCTCGTA | 95 | 0.0 | 33.15712 | 41 |
| AGACCGT | 95 | 0.0 | 33.15712 | 28 |
| CTCGTAT | 100 | 0.0 | 31.499262 | 42 |
| GAGCGGT | 95 | 0.0 | 30.790462 | 6 |
| AGCGGTT | 105 | 0.0 | 30.000961 | 7 |
| GAGACCG | 105 | 0.0 | 29.999298 | 27 |
| CCGAGAC | 110 | 0.0 | 28.635693 | 25 |
| ATGCCGA | 120 | 0.0 | 28.124342 | 22 |
| GCGGTTC | 115 | 0.0 | 27.390663 | 8 |
| GACCGTG | 115 | 0.0 | 27.390663 | 29 |
| AATGCCG | 115 | 0.0 | 27.390663 | 21 |
| ATCTCGT | 135 | 0.0 | 24.999414 | 40 |
| AGAGCGG | 120 | 1.6370905E-11 | 24.37578 | 5 |
| CGTGTTC | 130 | 1.8189894E-12 | 24.230204 | 32 |
| CCGTGTT | 135 | 3.6379788E-12 | 23.332788 | 31 |
| AATCTCG | 135 | 3.6379788E-12 | 23.332788 | 39 |
| TGCCGAG | 135 | 3.6379788E-12 | 23.332788 | 23 |
| AAGAGCG | 130 | 5.0931703E-11 | 22.50197 | 4 |