Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378182.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1128424 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 105 | 0.0 | 40.711117 | 44 |
| GCGGGTT | 25 | 0.0021001152 | 36.024334 | 1 |
| TCTCGTA | 140 | 0.0 | 33.747375 | 41 |
| TCGTATG | 130 | 0.0 | 32.882057 | 43 |
| CTCGTAT | 140 | 0.0 | 30.533339 | 42 |
| AGACCGA | 140 | 0.0 | 30.533339 | 28 |
| ATCTCGT | 170 | 0.0 | 29.117964 | 40 |
| AGAGCGG | 165 | 0.0 | 28.64556 | 5 |
| GACCGAG | 155 | 0.0 | 27.5785 | 29 |
| ACCGAGA | 165 | 0.0 | 27.270605 | 30 |
| GAGACCG | 160 | 0.0 | 25.31053 | 27 |
| GAGCGGT | 180 | 0.0 | 25.008028 | 6 |
| ATGCCGA | 205 | 0.0 | 24.144463 | 22 |
| AAGAGCG | 195 | 0.0 | 23.084335 | 4 |
| GCGGTTC | 195 | 0.0 | 23.07513 | 8 |
| GATCGGA | 50 | 0.0022656086 | 22.49825 | 18 |
| AGCGGTT | 200 | 0.0 | 22.49825 | 7 |
| AATGCCG | 205 | 0.0 | 21.949512 | 21 |
| TGCCGAG | 205 | 0.0 | 21.949512 | 23 |
| CGGTTCA | 215 | 0.0 | 20.928604 | 9 |