Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378420.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1087250 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGGTTC | 60 | 6.4283086E-9 | 33.75152 | 8 |
| CCGGATC | 60 | 6.4337655E-9 | 33.748413 | 31 |
| CGGATCT | 60 | 6.4337655E-9 | 33.748413 | 32 |
| CGTATGC | 70 | 2.8860086E-8 | 28.928543 | 44 |
| ACCGGAT | 70 | 2.8872819E-8 | 28.927212 | 30 |
| CTCGTAT | 80 | 1.053686E-7 | 25.312473 | 42 |
| TCGTATG | 85 | 1.893477E-7 | 23.823505 | 43 |
| GACCGGA | 85 | 1.8943138E-7 | 23.822409 | 29 |
| TCTCGTA | 90 | 3.286641E-7 | 22.499977 | 41 |
| AGCGGTT | 95 | 5.528764E-7 | 21.31675 | 7 |
| ATGCCGA | 95 | 5.533657E-7 | 21.314787 | 22 |
| TATCTCG | 100 | 9.0540925E-7 | 20.249979 | 39 |
| CGGTTCA | 100 | 9.058076E-7 | 20.249046 | 9 |
| ACGCCAT | 80 | 7.562575E-5 | 19.687479 | 40 |
| ATCTCGT | 120 | 2.496381E-7 | 18.74998 | 40 |
| AGACCGG | 110 | 2.2567656E-6 | 18.408226 | 28 |
| CGGAAGA | 115 | 3.4377772E-6 | 17.614347 | 1 |
| GAGCGGT | 115 | 3.4468394E-6 | 17.609488 | 6 |
| CCGAGAC | 130 | 5.784714E-7 | 17.306877 | 25 |
| AATGCCG | 120 | 5.1748975E-6 | 16.874207 | 21 |