Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378255.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1294266 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 55 | 1.3685164E-4 | 24.54497 | 44 |
| GCGGTTC | 55 | 1.3685164E-4 | 24.54497 | 8 |
| TCGTATG | 65 | 1.5241769E-5 | 24.230291 | 43 |
| CGGAACC | 60 | 2.4680715E-4 | 22.499556 | 32 |
| CTCGTAT | 60 | 2.4680715E-4 | 22.499556 | 42 |
| GACCGGA | 60 | 2.4680715E-4 | 22.499556 | 29 |
| AGACCGG | 70 | 2.7037457E-5 | 22.499556 | 28 |
| CGCCCGG | 150 | 0.0 | 22.498686 | 13 |
| TCTCGTA | 65 | 4.2391932E-4 | 20.76882 | 41 |
| ACGCCCG | 100 | 9.061805E-7 | 20.24882 | 12 |
| CCGGCTA | 220 | 0.0 | 19.430683 | 16 |
| CGGCTAA | 225 | 0.0 | 18.99889 | 17 |
| AGCGGTT | 75 | 0.0011104735 | 17.999643 | 7 |
| GAGACCG | 75 | 0.0011104735 | 17.999643 | 27 |
| CCTTCGT | 145 | 9.6340955E-8 | 17.074564 | 1 |
| CGGTTCA | 80 | 0.0017116708 | 16.874016 | 9 |
| GTCCGGC | 85 | 0.0025663986 | 15.881426 | 14 |
| CCGGAAC | 100 | 4.168172E-4 | 15.749689 | 31 |
| GCCCGGC | 295 | 0.0 | 15.2533455 | 14 |
| CCCGCCA | 165 | 4.192716E-7 | 15.002602 | 3 |