Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378422.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1015796 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGTACG | 40 | 3.458972E-7 | 39.37315 | 31 |
| TATCTCG | 50 | 1.981285E-6 | 31.500067 | 39 |
| GACCGTA | 55 | 4.165837E-6 | 28.635015 | 29 |
| CGTACGT | 55 | 4.165837E-6 | 28.635015 | 32 |
| ACGCCCG | 70 | 9.3095696E-7 | 25.713078 | 12 |
| CTCGTAT | 65 | 1.5240797E-5 | 24.229628 | 42 |
| CGTTATC | 70 | 2.7025464E-5 | 22.500051 | 36 |
| AGACCGT | 80 | 2.9754028E-6 | 22.498943 | 28 |
| CGGTTCA | 75 | 4.603625E-5 | 20.999012 | 9 |
| ACCGTAC | 75 | 4.603625E-5 | 20.999012 | 30 |
| AGAGCGG | 90 | 8.242529E-6 | 20.002012 | 5 |
| GAGACCG | 90 | 8.253057E-6 | 19.999058 | 27 |
| GAGCGGT | 80 | 7.556041E-5 | 19.689484 | 6 |
| CGCGCCC | 60 | 0.006511756 | 18.749117 | 11 |
| ACGTTAT | 85 | 1.2042458E-4 | 18.529453 | 35 |
| TCGTATG | 85 | 1.2047003E-4 | 18.52854 | 43 |
| CGCCCGG | 125 | 3.8340295E-7 | 17.999153 | 13 |
| ATCTCGT | 90 | 1.865377E-4 | 17.500038 | 40 |
| TCTCGTA | 90 | 1.8660794E-4 | 17.499176 | 41 |
| CACGCCC | 170 | 1.8299033E-9 | 17.205072 | 11 |