Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391170.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1030364 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA | 4197 | 0.40733177789596686 | No Hit |
| TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA | 2913 | 0.2827156228284373 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAAGCCG | 470 | 0.0 | 43.562847 | 13 |
| CGTCATA | 485 | 0.0 | 42.215538 | 24 |
| CCGATGA | 490 | 0.0 | 41.784767 | 17 |
| CGATGAC | 490 | 0.0 | 41.784767 | 18 |
| AAGCCGA | 500 | 0.0 | 41.39906 | 14 |
| GATGACG | 495 | 0.0 | 41.362698 | 19 |
| TGACGTC | 505 | 0.0 | 40.98917 | 21 |
| AGCCGAT | 510 | 0.0 | 40.58732 | 15 |
| ATGACGT | 505 | 0.0 | 40.543633 | 20 |
| ACGTCAT | 505 | 0.0 | 40.543633 | 23 |
| TCCTCGG | 360 | 0.0 | 39.999092 | 11 |
| CCTCGGG | 355 | 0.0 | 39.92867 | 12 |
| CTCGGGG | 355 | 0.0 | 39.92867 | 13 |
| GCGGTCT | 440 | 0.0 | 39.88546 | 36 |
| GCCGATG | 515 | 0.0 | 39.756382 | 16 |
| GGCGGTC | 455 | 0.0 | 39.559544 | 35 |
| TCGGGGA | 455 | 0.0 | 39.06505 | 14 |
| AATTCGG | 465 | 0.0 | 38.708805 | 20 |
| TTCGGTA | 465 | 0.0 | 38.708805 | 22 |
| GAATTCG | 465 | 0.0 | 38.708805 | 19 |