Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378290.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 864652 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTTCGCA | 30 | 0.005143199 | 30.00401 | 6 |
| ACGCCCA | 105 | 1.4452726E-6 | 19.284946 | 12 |
| CCCGCCA | 95 | 1.3130455E-5 | 18.950996 | 3 |
| CGCCACC | 155 | 5.329639E-10 | 18.87349 | 5 |
| CGTGAGC | 150 | 1.4184297E-7 | 16.50316 | 1 |
| CCGCCAC | 120 | 9.731808E-5 | 15.002873 | 4 |
| CGGCCTG | 90 | 0.0037539143 | 14.999402 | 10 |
| CACGCCC | 180 | 6.8677764E-8 | 14.999402 | 11 |
| ACCACGC | 190 | 1.3311546E-7 | 14.209961 | 9 |
| CACCACG | 210 | 2.9867806E-8 | 13.928018 | 8 |
| GCCACCA | 630 | 0.0 | 13.573242 | 6 |
| TGCCCGG | 100 | 0.007551017 | 13.499462 | 13 |
| GACTAGG | 100 | 0.007551017 | 13.499462 | 42 |
| CCACGCC | 205 | 3.3610922E-7 | 13.170207 | 10 |
| CAGCTAA | 385 | 0.0 | 12.272239 | 17 |
| CGCCCAG | 250 | 2.908091E-7 | 11.699533 | 13 |
| CCACCAC | 540 | 0.0 | 11.667551 | 7 |
| AGCTAAT | 415 | 1.8189894E-12 | 11.385089 | 18 |
| ACCAAGC | 165 | 0.0014325363 | 10.908656 | 9 |
| GCCCGGC | 150 | 0.008776718 | 10.499582 | 14 |