Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378428.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 853221 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGCTAT | 55 | 6.184564E-11 | 40.906586 | 31 |
| CGCTATT | 55 | 6.184564E-11 | 40.906586 | 32 |
| CTCGTAT | 75 | 1.7007551E-9 | 30.001678 | 42 |
| ACCGCTA | 70 | 2.8861905E-8 | 28.9268 | 30 |
| CGTATGC | 80 | 3.3905962E-9 | 28.126577 | 44 |
| TCGTATG | 85 | 6.4719643E-9 | 26.47207 | 43 |
| GACCGCT | 80 | 1.05375875E-7 | 25.310951 | 29 |
| GAGCGGT | 90 | 1.187982E-8 | 25.004332 | 6 |
| AGAGCGG | 95 | 2.1098458E-8 | 23.688313 | 5 |
| TCTCGTA | 100 | 3.639434E-8 | 22.50126 | 41 |
| AGACCGC | 90 | 3.286823E-7 | 22.498623 | 28 |
| GCGGTTC | 105 | 6.103437E-8 | 21.428514 | 8 |
| CCGAGAC | 95 | 5.531547E-7 | 21.314486 | 25 |
| CGGGATT | 95 | 5.531547E-7 | 21.314486 | 14 |
| AGCGGTT | 110 | 9.976793E-8 | 20.454493 | 7 |
| CGGTTCA | 110 | 9.9829776E-8 | 20.453293 | 9 |
| CGAGACC | 110 | 9.9829776E-8 | 20.453293 | 26 |
| CGGAAGA | 115 | 1.5902515E-7 | 19.569754 | 1 |
| AAGAGCG | 115 | 1.5902515E-7 | 19.569754 | 4 |
| TGCCGAG | 105 | 1.4455236E-6 | 19.284534 | 23 |