Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378307.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 773792 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 55 | 1.12737325E-7 | 32.725723 | 42 |
| GACCGTT | 60 | 2.4168912E-7 | 30.000519 | 29 |
| CGTATGC | 65 | 4.86918E-7 | 27.692787 | 44 |
| AGCGGTT | 65 | 4.86918E-7 | 27.692787 | 7 |
| CGTTTCG | 65 | 4.86918E-7 | 27.692787 | 32 |
| TTTCGAA | 65 | 4.871945E-7 | 27.690996 | 34 |
| CGAATCT | 65 | 4.871945E-7 | 27.690996 | 37 |
| TCGTATG | 65 | 4.871945E-7 | 27.690996 | 43 |
| TTCGAAT | 65 | 4.871945E-7 | 27.690996 | 35 |
| TCGAATC | 65 | 4.871945E-7 | 27.690996 | 36 |
| GCGGTTC | 70 | 9.3047856E-7 | 25.713068 | 8 |
| GTTTCGA | 85 | 1.8928586E-7 | 23.8224 | 33 |
| GAGCGGT | 80 | 2.9705589E-6 | 22.501842 | 6 |
| AGACCGT | 80 | 2.972225E-6 | 22.500387 | 28 |
| TCTCGTA | 80 | 2.9738949E-6 | 22.498934 | 41 |
| GAGACCG | 85 | 5.0279505E-6 | 21.176834 | 27 |
| CGGTTCA | 85 | 5.0307663E-6 | 21.175467 | 9 |
| AATGCCG | 90 | 8.248906E-6 | 19.999052 | 21 |
| AAGAGCG | 100 | 2.0415186E-5 | 18.0038 | 4 |
| AGAGCGG | 100 | 2.0437905E-5 | 18.001474 | 5 |