Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391386.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 750988 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATCTCGT | 40 | 1.5663896E-5 | 33.729374 | 40 |
| GATCGCG | 45 | 3.393842E-5 | 30.122068 | 4 |
| TCGTATG | 30 | 0.0051615397 | 29.981667 | 43 |
| AACGGGT | 55 | 4.1844323E-6 | 28.616957 | 12 |
| AGATCGC | 60 | 7.93246E-6 | 26.35681 | 3 |
| TCGCGCC | 45 | 0.0011974687 | 25.101723 | 6 |
| CGCGCCA | 45 | 0.0012310137 | 24.983057 | 7 |
| CACCGCG | 45 | 0.0012310137 | 24.983057 | 8 |
| GCGCCCG | 65 | 1.5308524E-5 | 24.21435 | 12 |
| CGCCCGG | 65 | 1.5308524E-5 | 24.21435 | 13 |
| ATCGCGC | 50 | 0.0022110823 | 22.59155 | 5 |
| TACGTGC | 50 | 0.0022719393 | 22.48625 | 39 |
| CGCCACT | 100 | 9.105388E-7 | 20.236279 | 9 |
| ACGGGTT | 80 | 7.598021E-5 | 19.674158 | 13 |
| CGTGAGC | 105 | 1.3890931E-6 | 19.364187 | 1 |
| CCTTCGT | 85 | 1.1668295E-4 | 18.604807 | 1 |
| CTTCGTT | 85 | 1.1668295E-4 | 18.604807 | 2 |
| TTCACCG | 85 | 1.1668295E-4 | 18.604807 | 5 |
| GCGCCAC | 85 | 1.2100066E-4 | 18.516855 | 8 |
| TCACCGT | 115 | 3.3145025E-6 | 17.680344 | 6 |