Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391359.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 537331 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCTTCGG | 40 | 1.5182266E-5 | 33.88096 | 1 |
| CGTATGC | 55 | 1.1308657E-7 | 32.710552 | 44 |
| CGGTCAT | 55 | 1.1317934E-7 | 32.707508 | 32 |
| ACCGGTC | 65 | 1.4088073E-8 | 31.135033 | 30 |
| GACCGGT | 65 | 1.4088073E-8 | 31.135033 | 29 |
| CTTCGGT | 30 | 0.005050631 | 30.113592 | 2 |
| TTCGGTG | 30 | 0.005050631 | 30.113592 | 3 |
| CTCGTAT | 60 | 2.4277324E-7 | 29.981884 | 42 |
| TCGTATG | 60 | 2.4277324E-7 | 29.981884 | 43 |
| CCGGTCA | 60 | 2.4277324E-7 | 29.981884 | 31 |
| TCTCGTA | 75 | 1.7037728E-6 | 23.98551 | 41 |
| AGACCGG | 75 | 1.7037728E-6 | 23.98551 | 28 |
| GTATGCC | 80 | 2.9830662E-6 | 22.488506 | 45 |
| GATCGGA | 60 | 2.4752354E-4 | 22.486414 | 18 |
| CCGAGAC | 80 | 2.9854782E-6 | 22.486414 | 25 |
| ATCGGAA | 65 | 4.2514794E-4 | 20.75669 | 19 |
| ATCTCGT | 95 | 1.3205612E-5 | 18.935928 | 40 |
| GAGACCG | 95 | 1.3205612E-5 | 18.935928 | 27 |
| TATCTCG | 95 | 1.3205612E-5 | 18.935928 | 39 |
| GCCGGGT | 60 | 0.0065288153 | 18.738678 | 8 |