Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378173.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1199920 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGAGACG | 165 | 0.0 | 38.18115 | 32 |
| GAGACGT | 170 | 0.0 | 37.05817 | 33 |
| TCGTATG | 170 | 0.0 | 37.056625 | 43 |
| CGTATGC | 180 | 0.0 | 36.24936 | 44 |
| GACGTAT | 180 | 0.0 | 34.999382 | 35 |
| TCTCGTA | 180 | 0.0 | 34.999382 | 41 |
| CTCGTAT | 190 | 0.0 | 34.341503 | 42 |
| GACCGAG | 190 | 0.0 | 34.340073 | 29 |
| GAGACCG | 200 | 0.0 | 33.748 | 27 |
| AGACGTA | 205 | 0.0 | 31.828709 | 34 |
| AGATCGG | 95 | 0.0 | 30.786367 | 17 |
| ACCGAGA | 215 | 0.0 | 30.347038 | 30 |
| AGACCGA | 215 | 0.0 | 30.347038 | 28 |
| ATCTCGT | 210 | 0.0 | 29.999474 | 40 |
| GAGCGCC | 30 | 0.0051488387 | 29.998222 | 25 |
| GATCGGA | 100 | 1.8189894E-12 | 29.247047 | 18 |
| TATCTCG | 225 | 0.0 | 27.999506 | 39 |
| CGTATCT | 250 | 0.0 | 26.099543 | 37 |
| ACGTATC | 245 | 0.0 | 25.713833 | 36 |
| AGAGCGG | 250 | 0.0 | 25.209013 | 5 |