Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391381.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1050474 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CACCGCG | 35 | 6.2703693E-6 | 38.551147 | 8 |
| ACCGCGC | 30 | 1.1440297E-4 | 37.476715 | 9 |
| CTTGCGC | 30 | 0.0051603103 | 29.984228 | 8 |
| GATCGGA | 105 | 8.54925E-11 | 25.69832 | 18 |
| GACCGTA | 45 | 0.0012302498 | 24.986858 | 44 |
| AGATCGG | 115 | 2.6739144E-10 | 23.463684 | 17 |
| CGGTTCA | 120 | 4.5474735E-10 | 22.48817 | 29 |
| AACGGTT | 50 | 0.0022720394 | 22.4871 | 36 |
| ATCGGAA | 120 | 4.5474735E-10 | 22.486029 | 19 |
| CCGAGAC | 135 | 8.367351E-11 | 21.655275 | 45 |
| AGCGGTT | 130 | 1.2350938E-9 | 20.758312 | 27 |
| GGGCGCC | 65 | 4.255695E-4 | 20.756334 | 14 |
| CCGCGCC | 65 | 4.255695E-4 | 20.756334 | 10 |
| TCGGAAG | 135 | 1.9790605E-9 | 19.987581 | 20 |
| GAGCGGT | 140 | 3.106834E-9 | 19.275574 | 26 |
| AGAGCGG | 140 | 3.108653E-9 | 19.274658 | 25 |
| CGTGAGC | 165 | 5.638867E-11 | 19.16114 | 1 |
| CCCCGAA | 60 | 0.006529925 | 18.740143 | 30 |
| ACGCCCG | 75 | 0.0011147731 | 17.988823 | 12 |
| GCGGTTC | 155 | 1.0968506E-8 | 17.410196 | 28 |