Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378130.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1374513 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATAG | 190 | 0.0 | 31.971643 | 32 |
| GACCGTA | 185 | 0.0 | 31.618452 | 29 |
| CGTATGC | 190 | 0.0 | 30.787508 | 44 |
| CTCGTAT | 195 | 0.0 | 29.998083 | 42 |
| GCGATTA | 45 | 3.4937264E-5 | 29.996994 | 20 |
| GCGCCTA | 30 | 0.00515013 | 29.996992 | 28 |
| GCGGTTC | 215 | 0.0 | 29.29939 | 8 |
| AGACCGT | 200 | 0.0 | 29.247066 | 28 |
| AGAGCGG | 210 | 0.0 | 28.942516 | 5 |
| TCTCGTA | 205 | 0.0 | 28.534763 | 41 |
| GAGACCG | 205 | 0.0 | 28.533726 | 27 |
| CCGTATA | 215 | 0.0 | 28.254011 | 31 |
| GAGCGGT | 220 | 0.0 | 27.626947 | 6 |
| ACCGTAT | 215 | 0.0 | 27.206577 | 30 |
| CGGTTCA | 245 | 0.0 | 26.629982 | 9 |
| ATCTCGT | 220 | 0.0 | 26.58921 | 40 |
| AGCGGTT | 240 | 0.0 | 26.247368 | 7 |
| TCGTATG | 225 | 0.0 | 25.998339 | 43 |
| CCGAGAC | 240 | 0.0 | 25.309961 | 25 |
| CGGAAGA | 245 | 0.0 | 24.815098 | 1 |