Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391200.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 999879 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTTCGAT | 50 | 0.002271128 | 22.488523 | 11 |
| CGGGATT | 135 | 8.6255204E-7 | 16.658165 | 14 |
| CGTATAA | 110 | 4.6568442E-5 | 16.35529 | 10 |
| TCGTATA | 115 | 6.810708E-5 | 15.64419 | 9 |
| ATCTTCG | 110 | 8.3975674E-4 | 14.360429 | 5 |
| CCCGCCA | 110 | 8.3975674E-4 | 14.360429 | 3 |
| CGCCCGG | 110 | 8.620189E-4 | 14.310878 | 13 |
| TTCGTAT | 130 | 1.9340866E-4 | 13.83909 | 8 |
| CCGCCAC | 100 | 0.0074043805 | 13.539834 | 4 |
| CTCCGCC | 200 | 2.501347E-7 | 13.494464 | 37 |
| CGTTGGA | 185 | 1.4772904E-6 | 13.417853 | 5 |
| TCGTTGG | 190 | 1.9934869E-6 | 13.064752 | 4 |
| CTTCGTA | 140 | 3.6212904E-4 | 12.850585 | 7 |
| CCGGCTA | 175 | 1.2737522E-5 | 12.850585 | 16 |
| CCTTCGT | 145 | 4.7246847E-4 | 12.451671 | 1 |
| GCCCGGC | 235 | 1.3097815E-7 | 12.440458 | 14 |
| CCTCCGC | 165 | 1.0466372E-4 | 12.267694 | 36 |
| GCCACCG | 150 | 6.289937E-4 | 12.035408 | 6 |
| TCTTCGT | 170 | 1.3401044E-4 | 11.946911 | 6 |
| AATCGCT | 190 | 2.9618353E-5 | 11.836065 | 13 |