Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378433.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 510573 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGTCAA | 40 | 3.4518234E-7 | 39.37697 | 32 |
| AAGAGCG | 45 | 8.6706314E-7 | 35.00861 | 4 |
| CTCGTAT | 45 | 8.6905857E-7 | 34.99832 | 42 |
| GACCGGT | 50 | 1.9779945E-6 | 31.501577 | 29 |
| GAGCGGT | 50 | 1.9779945E-6 | 31.501577 | 6 |
| CCGGTCA | 50 | 1.9779945E-6 | 31.501577 | 31 |
| CGGAAGA | 55 | 4.147856E-6 | 28.646214 | 1 |
| ACCGGTC | 55 | 4.1573585E-6 | 28.637796 | 30 |
| GAGACCG | 55 | 4.1573585E-6 | 28.637796 | 27 |
| CGTATGC | 55 | 4.160529E-6 | 28.634993 | 44 |
| CGGTTCA | 55 | 4.160529E-6 | 28.634993 | 9 |
| CCGAGAC | 55 | 4.160529E-6 | 28.634993 | 25 |
| TCGTATG | 55 | 4.160529E-6 | 28.634993 | 43 |
| AGAGCGG | 60 | 8.176716E-6 | 26.251312 | 5 |
| GCGGTTC | 60 | 8.1829385E-6 | 26.248743 | 8 |
| TCTCGTA | 65 | 1.5221607E-5 | 24.229609 | 41 |
| TGCCGAG | 65 | 1.5221607E-5 | 24.229609 | 23 |
| ATCTCGT | 70 | 2.7001914E-5 | 22.498924 | 40 |
| AATGCCG | 70 | 2.7001914E-5 | 22.498924 | 21 |
| ATGCCCG | 50 | 0.002263529 | 22.498922 | 12 |