Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378276.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 602286 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGCACCA | 30 | 0.005145661 | 29.999613 | 7 |
| ATCGCAC | 30 | 0.005145661 | 29.999613 | 5 |
| CACGCCC | 85 | 1.204118E-4 | 18.527634 | 11 |
| CACCACG | 135 | 8.5668944E-7 | 16.66645 | 8 |
| ACCACGC | 125 | 1.379851E-4 | 14.398619 | 9 |
| GTTAGCC | 100 | 0.0075503266 | 13.498705 | 17 |
| CCACGCC | 140 | 3.6049352E-4 | 12.855909 | 10 |
| CGCCACC | 125 | 0.0022495831 | 12.599837 | 5 |
| GGGCCTT | 135 | 0.0040036845 | 11.666515 | 27 |
| GCCACCA | 425 | 0.0 | 11.646908 | 6 |
| CCCGGCT | 140 | 0.00524522 | 11.251723 | 41 |
| AGCCACC | 235 | 2.1944841E-5 | 10.531779 | 5 |
| CCACCAC | 445 | 8.0035534E-11 | 10.112228 | 7 |
| GCTCATG | 270 | 1.0078168E-4 | 9.165788 | 13 |
| GCTAATT | 420 | 3.2923708E-8 | 9.106269 | 19 |
| AGTGAGC | 340 | 1.4814346E-5 | 8.603544 | 37 |
| GAGCCAC | 295 | 2.6298082E-4 | 8.390419 | 4 |
| TAGTAGA | 270 | 0.0010152856 | 8.333918 | 36 |
| TGAACCC | 270 | 0.0010169584 | 8.332534 | 14 |
| TTGCAGT | 380 | 6.6627726E-6 | 8.289367 | 33 |