Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391383.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 836470 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGGCTA | 90 | 1.1974407E-8 | 24.985321 | 16 |
| ATGCCCG | 45 | 0.0012304811 | 24.985321 | 12 |
| CGGCTAA | 100 | 3.6641723E-8 | 22.48679 | 17 |
| TCGTATA | 80 | 2.9883468E-6 | 22.486788 | 9 |
| CTTCGTA | 100 | 9.100022E-7 | 20.238111 | 7 |
| TTAGCCG | 70 | 7.0089404E-4 | 19.27439 | 26 |
| TTCGTAT | 100 | 2.0559131E-5 | 17.989431 | 8 |
| CCCGGCT | 130 | 5.813581E-7 | 17.297531 | 15 |
| CGTATAA | 105 | 3.126503E-5 | 17.132792 | 10 |
| TCTTCGT | 135 | 1.5266509E-5 | 15.055088 | 6 |
| ATCTTCG | 135 | 1.5266509E-5 | 15.055088 | 5 |
| CGTTGGA | 160 | 4.8351358E-6 | 14.114145 | 5 |
| CCTTCGT | 145 | 2.9953555E-5 | 14.017649 | 1 |
| TCGTTGG | 165 | 6.647304E-6 | 13.686444 | 4 |
| CTTCGTT | 155 | 5.6098295E-5 | 13.112496 | 2 |
| GCGTGGT | 155 | 5.6098295E-5 | 13.112496 | 4 |
| AACCCGG | 125 | 0.0022595641 | 12.593354 | 22 |
| TTCGTTG | 180 | 1.6294034E-5 | 12.545907 | 3 |
| CCGCCAC | 130 | 0.0029384862 | 12.159879 | 4 |
| AAACGGG | 185 | 2.2547641E-5 | 12.155022 | 11 |