Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391225.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 727330 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGATCCG | 25 | 0.0021124703 | 35.979595 | 38 |
| ATCGTGC | 55 | 0.0038531616 | 20.529041 | 5 |
| CGCCTGG | 70 | 7.006774E-4 | 19.274782 | 13 |
| GATCGTG | 60 | 0.0063730553 | 18.818289 | 4 |
| CGTGAGC | 145 | 4.693088E-4 | 12.460726 | 1 |
| CCGAGTA | 130 | 0.0029385185 | 12.15951 | 4 |
| GACGGGG | 185 | 3.0347356E-4 | 10.939742 | 43 |
| TCGTTGG | 145 | 0.0066386107 | 10.90163 | 4 |
| CGAGTAG | 145 | 0.0066386107 | 10.90163 | 5 |
| CGAACTC | 145 | 0.0068457867 | 10.856659 | 8 |
| ACTAGAC | 255 | 4.6993155E-6 | 10.582234 | 19 |
| GAAACGG | 170 | 0.0018447306 | 10.582233 | 10 |
| GTGTATT | 170 | 0.0018447306 | 10.582233 | 26 |
| GGAAACG | 170 | 0.0018447306 | 10.582233 | 9 |
| CGTTGGA | 150 | 0.008538569 | 10.538241 | 5 |
| AAACGGG | 175 | 0.0023475403 | 10.279884 | 11 |
| CTAGACA | 510 | 1.8189894E-12 | 10.141308 | 20 |
| CCACGCC | 200 | 6.2310975E-4 | 10.119262 | 10 |
| TTCGTTG | 180 | 0.0028640104 | 10.036421 | 3 |
| ACCACGC | 180 | 0.0029655334 | 9.994332 | 9 |