Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378285.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1034615 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTAACGT | 30 | 0.0051477 | 29.999193 | 38 |
| ACCGGGA | 65 | 4.238604E-4 | 20.768673 | 30 |
| AAAGCGC | 80 | 0.0017093371 | 16.876995 | 5 |
| CGGATCA | 80 | 0.0017115498 | 16.873732 | 11 |
| AGATCGC | 85 | 0.0025604325 | 15.886534 | 3 |
| ACTAGAC | 440 | 0.0 | 13.805779 | 19 |
| GAACCCG | 150 | 4.2727166E-5 | 13.498986 | 21 |
| GAGATCG | 155 | 5.786502E-5 | 13.06985 | 2 |
| ACGCCCA | 125 | 0.0022525268 | 12.599051 | 12 |
| TAGACAG | 650 | 0.0 | 12.460602 | 21 |
| ACCACGC | 200 | 4.978747E-5 | 11.249154 | 9 |
| AGGCCGA | 165 | 0.0014327938 | 10.908798 | 42 |
| ACGGTGG | 145 | 0.006820238 | 10.862827 | 7 |
| CTAGACA | 705 | 0.0 | 10.850247 | 20 |
| ACTCGGG | 210 | 8.1735794E-5 | 10.713998 | 34 |
| AACCCGG | 190 | 3.8671622E-4 | 10.657609 | 22 |
| ACCCGGG | 195 | 4.91465E-4 | 10.384336 | 23 |
| AACTAGA | 650 | 0.0 | 10.383835 | 18 |
| TACTCGG | 175 | 0.002338465 | 10.285439 | 33 |
| CACGCCC | 175 | 0.002339404 | 10.284941 | 11 |