Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1391379.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1075311 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GGTTTCG | 50 | 0.0022118785 | 22.591242 | 1 |
| GATCGGA | 50 | 0.0022719945 | 22.487236 | 18 |
| ATCGGAA | 60 | 0.0065315925 | 18.739363 | 19 |
| GATCGAG | 60 | 0.006533346 | 18.738491 | 43 |
| CGGGATT | 145 | 4.8751233E-4 | 12.405597 | 14 |
| CCGGCTA | 180 | 2.358249E-4 | 11.242572 | 16 |
| ACTAGAC | 390 | 7.8216544E-11 | 10.95532 | 20 |
| ACGGGAT | 190 | 3.8901312E-4 | 10.650858 | 13 |
| CCTTCGT | 170 | 0.0017763864 | 10.631172 | 1 |
| CGGGGTT | 170 | 0.0017763864 | 10.631172 | 1 |
| CTTCGTT | 170 | 0.0017777694 | 10.630178 | 2 |
| TGAGCCG | 280 | 1.2654637E-6 | 10.440502 | 45 |
| TCTCGAA | 195 | 4.737853E-4 | 10.425753 | 5 |
| CTCGAAC | 180 | 0.002858377 | 10.039613 | 6 |
| CCGAGAT | 250 | 4.3751512E-5 | 9.893924 | 43 |
| GAATCGC | 205 | 7.8311434E-4 | 9.871527 | 12 |
| TCGCTTG | 255 | 5.439583E-5 | 9.699473 | 15 |
| CCCGGCT | 210 | 9.767173E-4 | 9.63649 | 15 |
| AGAATCG | 210 | 9.767173E-4 | 9.63649 | 11 |
| GAGCCGA | 235 | 2.561115E-4 | 9.568591 | 40 |