Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378439.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1503403 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGCGGTT | 65 | 4.2377575E-4 | 20.770182 | 7 |
| CGTATGC | 65 | 4.2396606E-4 | 20.7688 | 44 |
| GCGGTTC | 65 | 4.2396606E-4 | 20.7688 | 8 |
| CTCGTAT | 70 | 6.985813E-4 | 19.285315 | 42 |
| GACCGGC | 70 | 6.985813E-4 | 19.285315 | 29 |
| CGGCTAA | 185 | 3.074092E-10 | 17.026108 | 17 |
| ATGCCGA | 80 | 0.0017117942 | 16.874088 | 22 |
| ACCCGGC | 135 | 8.59156E-7 | 16.66577 | 14 |
| GAGCGGT | 85 | 0.0025637357 | 15.884137 | 6 |
| TCTCGTA | 85 | 0.0025660126 | 15.882025 | 41 |
| CCGAGAC | 120 | 9.759821E-5 | 14.999191 | 25 |
| ACGGGAT | 170 | 5.894708E-7 | 14.558038 | 13 |
| ACCGGCA | 95 | 0.0053777713 | 14.210233 | 30 |
| AGACCGG | 95 | 0.0053777713 | 14.210233 | 28 |
| ATGACGA | 95 | 0.005378958 | 14.209759 | 20 |
| TCGTATG | 100 | 0.0075534726 | 13.499721 | 43 |
| CCGGCTA | 185 | 1.5294681E-6 | 13.377657 | 16 |
| CACCCGG | 155 | 5.8150552E-5 | 13.063811 | 13 |
| CGTTGGA | 300 | 1.2732926E-10 | 12.751432 | 5 |
| CGGGATT | 180 | 1.695013E-5 | 12.499326 | 14 |