Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378157.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1239149 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 155 | 0.0 | 37.740376 | 42 |
| TCTCGTA | 165 | 0.0 | 35.453083 | 41 |
| TCGTATG | 165 | 0.0 | 35.453083 | 43 |
| CGTATGC | 170 | 0.0 | 34.410343 | 44 |
| GACCGAG | 180 | 0.0 | 32.498657 | 29 |
| ACCGAGT | 180 | 0.0 | 32.498657 | 30 |
| ATCTCGT | 205 | 0.0 | 31.827953 | 40 |
| CGAGTGA | 185 | 0.0 | 31.620317 | 32 |
| GAGACCG | 210 | 0.0 | 28.92621 | 27 |
| CCGAGTG | 220 | 0.0 | 27.612497 | 31 |
| CATCTCG | 235 | 0.0 | 26.807405 | 39 |
| CGGTTCA | 220 | 0.0 | 26.58874 | 9 |
| AGCGGTT | 220 | 0.0 | 26.58874 | 7 |
| GCGGTTC | 225 | 0.0 | 25.99788 | 8 |
| ATCGGAA | 70 | 9.315154E-7 | 25.712189 | 19 |
| AGACCGA | 235 | 0.0 | 24.892591 | 28 |
| AATGCCG | 260 | 0.0 | 24.22879 | 21 |
| GTATGCC | 250 | 0.0 | 23.399035 | 45 |
| CCGAGAC | 260 | 0.0 | 23.363478 | 25 |
| GAGCGGT | 255 | 0.0 | 22.94949 | 6 |