Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390680.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 264798 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCCGCCA | 20 | 6.992545E-4 | 45.04027 | 3 |
| ACCACGC | 40 | 3.4410368E-7 | 39.380455 | 9 |
| CACCACG | 35 | 6.224158E-6 | 38.57677 | 8 |
| GGTGGCG | 50 | 7.131223E-5 | 27.00374 | 8 |
| TTCGTTG | 45 | 0.0012176916 | 25.022375 | 3 |
| CTCCGCC | 55 | 1.366539E-4 | 24.539583 | 37 |
| CCACGCC | 65 | 1.5163721E-5 | 24.234129 | 10 |
| CGTTGGA | 50 | 0.0022433826 | 22.528654 | 5 |
| CCTTCGT | 50 | 0.0022483205 | 22.520136 | 1 |
| GGCTAAT | 90 | 3.2687603E-7 | 22.498869 | 18 |
| CGCCTCC | 60 | 2.464544E-4 | 22.49462 | 40 |
| CTTCGTT | 55 | 0.0039083497 | 20.47285 | 2 |
| TCGTTGG | 60 | 0.0064640883 | 18.76678 | 4 |
| ACGCCCA | 60 | 0.006506555 | 18.745516 | 12 |
| CCTCCCG | 60 | 0.006506555 | 18.745516 | 42 |
| CGGAGGT | 60 | 0.006506555 | 18.745516 | 33 |
| GCTAATT | 200 | 1.8189894E-12 | 17.999092 | 19 |
| CACGCCC | 95 | 2.8061154E-4 | 16.581245 | 11 |
| AGGTTGC | 110 | 4.62534E-5 | 16.359722 | 36 |
| GTTGCAG | 125 | 7.599054E-6 | 16.196125 | 38 |