Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390742.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 685384 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGACCGC | 50 | 1.983335E-6 | 31.49336 | 28 |
| TGTCGTT | 30 | 0.005149295 | 29.995865 | 18 |
| CTCGTAT | 55 | 4.1709136E-6 | 28.62824 | 42 |
| TCTCGTA | 55 | 4.1709136E-6 | 28.62824 | 41 |
| CGCATAC | 60 | 8.198651E-6 | 26.244467 | 32 |
| GACCGCA | 60 | 8.198651E-6 | 26.244467 | 29 |
| GAGACCG | 60 | 8.198651E-6 | 26.244467 | 27 |
| CGTATGC | 60 | 8.203297E-6 | 26.242552 | 44 |
| CCGCATA | 65 | 1.5250724E-5 | 24.225662 | 31 |
| TCGTATG | 65 | 1.5259344E-5 | 24.223896 | 43 |
| ATCTCGT | 70 | 2.7038139E-5 | 22.496899 | 40 |
| TATCTCG | 70 | 2.7038139E-5 | 22.496899 | 39 |
| ACCGCAT | 75 | 4.606627E-5 | 20.995573 | 30 |
| CGTGAGC | 70 | 6.9210806E-4 | 19.309826 | 1 |
| CCGCCAC | 70 | 6.9860095E-4 | 19.283056 | 16 |
| GAGCGGT | 90 | 1.8444953E-4 | 17.52444 | 6 |
| AGAGCGG | 105 | 3.072425E-5 | 17.166798 | 5 |
| CCGAGAC | 110 | 4.644393E-5 | 16.358994 | 25 |
| AAGAGCG | 100 | 4.124577E-4 | 15.769691 | 4 |
| CGGAAGA | 105 | 5.9755135E-4 | 15.018754 | 1 |