Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378660.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1569759 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGTTG | 115 | 0.0 | 35.214226 | 30 |
| TCTCGTA | 135 | 0.0 | 34.99797 | 41 |
| CGTTGTA | 125 | 0.0 | 34.198013 | 32 |
| CTCGTAT | 140 | 0.0 | 33.74804 | 42 |
| CGTATGC | 140 | 0.0 | 32.14099 | 44 |
| CCGTTGT | 135 | 0.0 | 29.99826 | 31 |
| GACCGTT | 135 | 0.0 | 29.997305 | 29 |
| TCGTATG | 170 | 0.0 | 27.79162 | 43 |
| GAGCGGT | 180 | 0.0 | 25.012094 | 6 |
| AGACCGT | 165 | 0.0 | 24.543247 | 28 |
| GAGACCG | 175 | 0.0 | 24.426374 | 27 |
| CCGAGAC | 175 | 0.0 | 24.426374 | 25 |
| AGCGGTT | 190 | 0.0 | 23.681328 | 7 |
| CGGTTCA | 210 | 0.0 | 23.568558 | 9 |
| CGGAAGA | 210 | 0.0 | 22.519497 | 1 |
| AGAGCGG | 215 | 0.0 | 21.987375 | 5 |
| GCGGTTC | 205 | 0.0 | 21.948547 | 8 |
| AAGAGCG | 210 | 0.0 | 21.438936 | 4 |
| ATCTCGT | 225 | 0.0 | 19.998838 | 40 |
| CATCTCG | 240 | 0.0 | 19.686357 | 39 |