Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390626.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 748033 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATAACG | 30 | 1.14145594E-4 | 37.4893 | 44 |
| GTCCGAT | 25 | 0.0021095902 | 35.989735 | 44 |
| TCGTATG | 50 | 4.8872607E-8 | 35.989735 | 43 |
| CTCGTAT | 50 | 1.9848085E-6 | 31.491016 | 42 |
| TCTCGTA | 50 | 1.9848085E-6 | 31.491016 | 41 |
| CGTATGC | 55 | 4.171634E-6 | 28.628197 | 44 |
| CACGTTA | 40 | 6.107115E-4 | 28.169703 | 1 |
| CGAGGTA | 60 | 8.204703E-6 | 26.242512 | 32 |
| AGACCGA | 65 | 1.52540415E-5 | 24.225477 | 28 |
| ATCTCGT | 65 | 1.5261941E-5 | 24.223858 | 40 |
| GATCGGA | 85 | 5.040769E-6 | 21.170431 | 18 |
| GAGACCG | 75 | 4.607621E-5 | 20.995413 | 27 |
| CACGCCC | 65 | 4.2406577E-4 | 20.766085 | 11 |
| GTACATC | 95 | 1.3173067E-5 | 18.94323 | 36 |
| CGGGTTT | 60 | 0.006516632 | 18.745905 | 14 |
| ATAACGA | 60 | 0.0065191477 | 18.74465 | 45 |
| ACCGAGG | 85 | 1.2057442E-4 | 18.525366 | 30 |
| CATCTCG | 85 | 1.2057442E-4 | 18.525366 | 39 |
| GACCGAG | 90 | 1.8676945E-4 | 17.496178 | 29 |
| CCTTCGT | 130 | 5.680613E-7 | 17.335201 | 1 |