Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378680.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1347540 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGTATG | 70 | 8.1490725E-10 | 32.141453 | 43 |
| CGTATGC | 80 | 3.3978722E-9 | 28.123772 | 44 |
| CTCGTAT | 90 | 1.1919838E-8 | 24.998907 | 42 |
| GCGGTTC | 90 | 1.19289325E-8 | 24.997051 | 8 |
| GAGCGGT | 95 | 2.1071173E-8 | 23.693726 | 6 |
| TATCTCG | 105 | 6.110167E-8 | 21.428429 | 39 |
| AGAGCGG | 110 | 9.945143E-8 | 20.462763 | 5 |
| TCTCGTA | 110 | 9.991891E-8 | 20.45365 | 41 |
| ATCTCGT | 115 | 1.5959631E-7 | 19.565088 | 40 |
| AGCGGTT | 120 | 2.5005465E-7 | 18.747791 | 7 |
| ATGCCGA | 155 | 1.0921212E-8 | 17.417301 | 22 |
| CGGTTCA | 130 | 5.791553E-7 | 17.30565 | 9 |
| AATGCCG | 160 | 1.6165359E-8 | 16.87301 | 21 |
| TGCCGAG | 165 | 2.361412E-8 | 16.362314 | 23 |
| GACCGTG | 115 | 6.788576E-5 | 15.650908 | 29 |
| CGGAAGA | 150 | 2.5527115E-6 | 15.012157 | 1 |
| AGACCGT | 120 | 9.760856E-5 | 14.998789 | 28 |
| ACGCCCG | 120 | 9.763944E-5 | 14.998233 | 12 |
| CGCCCGG | 170 | 5.897655E-7 | 14.557106 | 13 |
| CGTGTTG | 140 | 2.2314496E-5 | 14.463654 | 32 |