Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379234.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 722783 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCCGTGT | 25 | 0.0021041448 | 36.00853 | 2 |
| TCGTATG | 35 | 2.8188652E-4 | 32.143795 | 43 |
| ATGCCGA | 35 | 2.8200098E-4 | 32.14157 | 22 |
| ACCGGGC | 30 | 0.0051470147 | 29.998802 | 20 |
| GCGGTTC | 40 | 6.1653514E-4 | 28.123877 | 8 |
| AGACCGT | 40 | 6.1653514E-4 | 28.123877 | 28 |
| ATCTCGT | 50 | 7.1567294E-5 | 26.998922 | 40 |
| AGAGCGG | 45 | 0.0012254108 | 25.00246 | 5 |
| GAGACCG | 50 | 0.002264328 | 22.499102 | 27 |
| TGCCGAG | 60 | 2.466947E-4 | 22.499102 | 23 |
| AGCGGTT | 55 | 0.0039360574 | 20.453728 | 7 |
| GAGCGGT | 55 | 0.0039360574 | 20.453728 | 6 |
| GACCGTG | 60 | 0.0065097143 | 18.74925 | 29 |
| CGGTTCA | 60 | 0.0065097143 | 18.74925 | 9 |
| CCGAGAC | 60 | 0.0065097143 | 18.74925 | 25 |
| CGTGAGC | 160 | 2.9482726E-7 | 15.473485 | 1 |
| CACCACG | 190 | 1.3301178E-7 | 14.209958 | 8 |
| ACCACGC | 160 | 5.0220297E-6 | 14.061938 | 9 |
| CGCCTGG | 115 | 0.0012013846 | 13.695106 | 13 |
| CCACGCC | 155 | 5.8061567E-5 | 13.063994 | 10 |