Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390790.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 942629 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGAACTA | 65 | 1.5267015E-5 | 24.223942 | 32 |
| CTCGTAT | 75 | 4.611505E-5 | 20.994085 | 42 |
| GATCGGA | 75 | 4.611505E-5 | 20.994085 | 18 |
| CTGCTCG | 55 | 0.003942448 | 20.448784 | 16 |
| CCGCGCC | 80 | 7.568282E-5 | 19.685085 | 10 |
| CGTATGC | 80 | 7.577546E-5 | 19.681953 | 44 |
| CCGAACT | 95 | 1.3186207E-5 | 18.94203 | 31 |
| GTGCGAT | 60 | 0.0065202448 | 18.744719 | 18 |
| ACCGCGC | 85 | 1.20528166E-4 | 18.527138 | 9 |
| CACCGCG | 85 | 1.20528166E-4 | 18.527138 | 8 |
| ACCGAAC | 85 | 1.2067532E-4 | 18.52419 | 30 |
| ATCGGAA | 85 | 1.2067532E-4 | 18.52419 | 19 |
| CCGTGCC | 75 | 0.0010979475 | 18.029358 | 3 |
| TCTCGTA | 100 | 2.0509655E-5 | 17.994928 | 41 |
| AGATCGG | 95 | 2.8247436E-4 | 16.574278 | 17 |
| TCGGAAG | 95 | 2.8247436E-4 | 16.574278 | 20 |
| TCGTATG | 95 | 2.8247436E-4 | 16.574278 | 43 |
| ATCTCGT | 115 | 6.7967696E-5 | 15.647764 | 40 |
| CCGCCAC | 135 | 1.5559828E-5 | 15.025262 | 4 |
| CCGGCTA | 180 | 6.890332E-8 | 14.995774 | 16 |