Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378733.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 852394 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGTATG | 70 | 0.0 | 38.569668 | 43 |
| CGTATGC | 75 | 4.7293724E-11 | 32.998493 | 44 |
| CTCGTAT | 75 | 4.7293724E-11 | 32.998493 | 42 |
| CGAGTGA | 80 | 1.0004442E-10 | 30.936089 | 32 |
| GCGGTTC | 95 | 0.0 | 30.788069 | 8 |
| TCTCGTA | 85 | 2.0372681E-10 | 29.11632 | 41 |
| AGCGGTT | 95 | 2.3646862E-11 | 28.419756 | 7 |
| CGGTTCA | 95 | 7.421477E-10 | 26.051443 | 9 |
| GACCGAG | 95 | 7.421477E-10 | 26.051443 | 29 |
| GAGCGGT | 105 | 2.3592293E-9 | 23.575886 | 6 |
| CATCTCG | 105 | 2.3665052E-9 | 23.570353 | 39 |
| AATGCCG | 115 | 2.6557245E-10 | 23.477188 | 21 |
| GAGACCG | 110 | 4.0508894E-9 | 22.498974 | 27 |
| AGACCGA | 110 | 4.0508894E-9 | 22.498974 | 28 |
| ATCTCGT | 115 | 6.7666406E-9 | 21.520756 | 40 |
| ACCGAGT | 115 | 6.7666406E-9 | 21.520756 | 30 |
| ATGCCGA | 115 | 6.7666406E-9 | 21.520756 | 22 |
| TGCCGAG | 115 | 6.7666406E-9 | 21.520756 | 23 |
| GTATGCC | 120 | 1.1048542E-8 | 20.624058 | 45 |
| CCGAGAC | 120 | 1.1048542E-8 | 20.624058 | 25 |