Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390656.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1145972 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGGT | 60 | 2.4227484E-7 | 29.994648 | 29 |
| GCGCAAC | 30 | 0.0051517445 | 29.994648 | 22 |
| GTGGTCG | 30 | 0.005152844 | 29.993338 | 20 |
| CGGTTTA | 70 | 9.3255403E-7 | 25.708576 | 32 |
| ATCGGAA | 85 | 1.8968967E-7 | 23.819279 | 19 |
| GATCGGA | 90 | 3.292589E-7 | 22.495985 | 18 |
| CGATCTG | 50 | 0.0022675293 | 22.495005 | 7 |
| CTCGTAT | 80 | 2.981611E-6 | 22.494022 | 42 |
| TCGTATG | 85 | 5.043783E-6 | 21.170843 | 43 |
| ACGAGAC | 55 | 0.0039406004 | 20.450897 | 35 |
| ACCGGTT | 90 | 8.263949E-6 | 19.996431 | 30 |
| AGATCGG | 105 | 1.4474281E-6 | 19.283115 | 17 |
| TTCGATC | 60 | 0.00646483 | 18.772867 | 5 |
| ATCTCGT | 100 | 2.050539E-5 | 17.996004 | 40 |
| CGTATGC | 100 | 2.0513087E-5 | 17.995218 | 44 |
| CCGGTTT | 110 | 4.6480563E-5 | 16.35929 | 31 |
| TCGGAAG | 125 | 7.642224E-6 | 16.196402 | 20 |
| GAGACCG | 115 | 6.7902845E-5 | 15.650065 | 27 |
| AGACCGG | 115 | 6.7902845E-5 | 15.650065 | 28 |
| CATCTCG | 115 | 6.7928166E-5 | 15.649381 | 39 |