Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378775.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1186979 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TATGCCG | 120 | 0.0 | 35.623035 | 43 |
| ATGCCGT | 145 | 0.0 | 29.48113 | 44 |
| TGCCGTC | 160 | 0.0 | 26.717274 | 45 |
| TCTCGTA | 180 | 0.0 | 22.498758 | 38 |
| AGACCGT | 195 | 0.0 | 21.921865 | 25 |
| CTCGTAT | 200 | 0.0 | 21.37382 | 39 |
| GACCGTC | 205 | 0.0 | 20.852507 | 26 |
| ACCGTCT | 220 | 0.0 | 20.453415 | 27 |
| ATGCCGA | 330 | 0.0 | 19.771635 | 19 |
| AGATCGG | 115 | 1.5963815E-7 | 19.564137 | 25 |
| GAGACCG | 220 | 0.0 | 19.430744 | 24 |
| AATGCCG | 340 | 0.0 | 19.190117 | 18 |
| TCGTATG | 235 | 0.0 | 19.147879 | 40 |
| CGTATGC | 225 | 0.0 | 18.998951 | 41 |
| GATCGGA | 120 | 2.4982728E-7 | 18.748966 | 26 |
| GCGGTTC | 350 | 0.0 | 18.648897 | 5 |
| AGCGGTT | 360 | 0.0 | 18.130873 | 4 |
| TGCCGAG | 360 | 0.0 | 18.123999 | 20 |
| ATCTCGT | 225 | 0.0 | 17.999006 | 37 |
| GAGCGGT | 365 | 0.0 | 17.882504 | 3 |