Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390666.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 924239 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATCGGAA | 65 | 9.094947E-12 | 38.068043 | 19 |
| GATCGGA | 75 | 4.7293724E-11 | 32.992302 | 18 |
| AGACCGC | 35 | 2.823815E-4 | 32.13536 | 28 |
| ACGCCGG | 30 | 0.0051539796 | 29.99138 | 14 |
| ATTGCGC | 30 | 0.0051539796 | 29.99138 | 29 |
| CTCGTAT | 45 | 3.4982564E-5 | 29.989758 | 42 |
| AGATCGG | 85 | 2.0372681E-10 | 29.110855 | 17 |
| TCGGAAG | 85 | 2.0372681E-10 | 29.109282 | 20 |
| GACCGCT | 40 | 6.175592E-4 | 28.11692 | 29 |
| CGTATGC | 50 | 7.17356E-5 | 26.990782 | 44 |
| TATCTCG | 55 | 1.3705903E-4 | 24.5384 | 39 |
| AGCGGTT | 125 | 2.910383E-11 | 23.394543 | 27 |
| GACGGAA | 50 | 0.0022673476 | 22.494753 | 23 |
| GCGGTTC | 110 | 4.0618033E-9 | 22.494751 | 28 |
| GAGCGGT | 110 | 4.0618033E-9 | 22.494751 | 26 |
| TCTCGTA | 60 | 2.4718043E-4 | 22.493536 | 41 |
| TCGTATG | 60 | 2.4727097E-4 | 22.492317 | 43 |
| AGAGCGG | 115 | 6.7830115E-9 | 21.51672 | 25 |
| GCGGAGC | 75 | 4.6115812E-5 | 20.993965 | 32 |
| ATCTCGT | 65 | 4.2455902E-4 | 20.763262 | 40 |