Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378718.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 894633 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 45 | 8.6983346E-7 | 34.999348 | 44 |
| CGTCTAG | 45 | 8.6983346E-7 | 34.999348 | 32 |
| TCTCGTA | 50 | 1.9812578E-6 | 31.499413 | 41 |
| CTCGTAT | 55 | 4.164185E-6 | 28.63583 | 42 |
| GATCGGA | 40 | 6.1657385E-4 | 28.124475 | 18 |
| ATCGGAA | 40 | 6.1657385E-4 | 28.124475 | 19 |
| GACCGTC | 60 | 8.19008E-6 | 26.249512 | 29 |
| GAGACCG | 60 | 8.19008E-6 | 26.249512 | 27 |
| AGACCGT | 65 | 1.5234806E-5 | 24.230318 | 28 |
| TCGTATG | 65 | 1.5234806E-5 | 24.230318 | 43 |
| ATCTCGT | 75 | 4.60183E-5 | 20.999609 | 40 |
| CCGTCTA | 75 | 4.60183E-5 | 20.999609 | 31 |
| TATCTCG | 75 | 4.60183E-5 | 20.999609 | 39 |
| AGATCGG | 55 | 0.003936291 | 20.454165 | 17 |
| GCGGTTC | 90 | 8.249221E-6 | 19.999628 | 8 |
| AGCGGTT | 125 | 3.8316284E-7 | 17.999662 | 7 |
| ACCGTCT | 90 | 1.8653595E-4 | 17.499674 | 30 |
| AAGAGCG | 105 | 3.11018E-5 | 17.143496 | 4 |
| GAGCGGT | 105 | 3.11018E-5 | 17.143496 | 6 |
| AGAGCGG | 105 | 3.11018E-5 | 17.143496 | 5 |