Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390781.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 954588 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAAGTCG | 30 | 0.0051526893 | 29.993017 | 36 |
| CGCCCGG | 75 | 5.649781E-8 | 26.993715 | 13 |
| ACGCCCG | 80 | 2.9798957E-6 | 22.494762 | 12 |
| CGCAAAA | 50 | 0.0022673958 | 22.494762 | 39 |
| CTCGTAT | 75 | 4.6098437E-5 | 20.995111 | 42 |
| CCGGCTA | 110 | 9.998621E-8 | 20.450855 | 16 |
| CGGCTAA | 115 | 1.597673E-7 | 19.561687 | 17 |
| ACACCCG | 70 | 6.9932296E-4 | 19.281225 | 12 |
| CGCTCAC | 60 | 0.0065164915 | 18.746618 | 16 |
| TTCGGAG | 60 | 0.0065164915 | 18.746618 | 19 |
| TCTCGTA | 85 | 1.2063205E-4 | 18.525099 | 41 |
| GATCGGA | 110 | 2.2590575E-6 | 18.40577 | 18 |
| CACGCCC | 180 | 2.0736479E-10 | 17.499592 | 11 |
| GACCGAG | 95 | 2.8226088E-4 | 16.575956 | 29 |
| AGACCGA | 95 | 2.8226088E-4 | 16.575956 | 28 |
| CGTATGC | 95 | 2.823737E-4 | 16.575087 | 44 |
| TCGGAAG | 125 | 7.636521E-6 | 16.197077 | 20 |
| ACCACGC | 225 | 1.8189894E-11 | 15.999628 | 9 |
| CTTCGTA | 100 | 4.1668536E-4 | 15.749634 | 7 |
| CCGAGCT | 100 | 4.171839E-4 | 15.747158 | 31 |