Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390672.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 870759 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GAGTCGA | 35 | 2.8231152E-4 | 32.13646 | 17 |
| AGATCGG | 65 | 1.4055331E-8 | 31.147644 | 17 |
| GCGGTTC | 80 | 3.4015102E-9 | 28.117785 | 28 |
| GATCGGA | 75 | 5.6466888E-8 | 26.994625 | 18 |
| ATCGGAA | 75 | 5.6466888E-8 | 26.994625 | 19 |
| AGAGCGG | 75 | 5.649963E-8 | 26.993074 | 25 |
| GAGCGGT | 85 | 6.495611E-9 | 26.463799 | 26 |
| AGCGGTT | 100 | 3.6516212E-8 | 22.494228 | 27 |
| CGGTTCA | 95 | 5.542206E-7 | 21.310322 | 29 |
| CCGAGAC | 100 | 9.072046E-7 | 20.244806 | 45 |
| AAGAGCG | 105 | 1.4482994E-6 | 19.280767 | 24 |
| CGGAAGA | 110 | 2.2602362E-6 | 18.40437 | 21 |
| TCGGAAG | 110 | 2.2602362E-6 | 18.40437 | 20 |
| CGGGATT | 120 | 9.764385E-5 | 14.997014 | 14 |
| GCCACCG | 110 | 8.4831496E-4 | 14.340861 | 6 |
| ATGCCGA | 145 | 3.106797E-5 | 13.963538 | 11 |
| CCGGCTA | 135 | 2.655259E-4 | 13.330679 | 16 |
| CGAGATC | 170 | 9.415842E-6 | 13.232659 | 15 |
| ACTAGAC | 325 | 1.8189894E-12 | 13.151227 | 19 |
| TGCCGAG | 160 | 7.836645E-5 | 12.653004 | 12 |