Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379282.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 498708 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGGTTC | 45 | 3.488249E-5 | 29.99833 | 8 |
| TGGCGCG | 30 | 0.0051458995 | 29.99833 | 12 |
| GAGCGGT | 45 | 3.488249E-5 | 29.99833 | 6 |
| ACCGGCT | 45 | 0.001225979 | 24.998608 | 30 |
| CGTATGC | 45 | 0.001225979 | 24.998608 | 44 |
| GACCGGC | 45 | 0.001225979 | 24.998608 | 29 |
| AGACCGG | 45 | 0.001225979 | 24.998608 | 28 |
| TCGTATG | 45 | 0.001225979 | 24.998608 | 43 |
| CGGTTCA | 55 | 1.3672031E-4 | 24.544086 | 9 |
| AGCGGTT | 65 | 4.2351882E-4 | 20.768072 | 7 |
| TCTCGTA | 55 | 0.003932446 | 20.455458 | 41 |
| CGGAAGA | 70 | 6.964382E-4 | 19.290442 | 1 |
| AAGAGCG | 70 | 6.97379E-4 | 19.286575 | 4 |
| AGAGCGG | 70 | 6.97379E-4 | 19.286575 | 5 |
| ATGCCGA | 70 | 6.9784984E-4 | 19.28464 | 22 |
| CCGGCTG | 60 | 0.006507542 | 18.748955 | 31 |
| GTATGCC | 60 | 0.006507542 | 18.748955 | 45 |
| AATGCCG | 75 | 0.0011094399 | 17.998999 | 21 |
| TGCCGAG | 80 | 0.0017096493 | 16.87406 | 23 |
| CCGAGAC | 105 | 6.0309184E-4 | 14.999165 | 25 |