Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390715.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 862145 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGCGAT | 55 | 0.0039407494 | 20.450066 | 14 |
| ATCTTCG | 80 | 7.482259E-5 | 19.714058 | 5 |
| CTTCGTT | 95 | 1.3006584E-5 | 18.971825 | 2 |
| AAAGCGC | 75 | 0.0010999211 | 18.02428 | 5 |
| CGTATAA | 80 | 0.001710893 | 16.874239 | 10 |
| TCGTATA | 80 | 0.001710893 | 16.874239 | 9 |
| GCGGGTG | 80 | 0.0017128864 | 16.871304 | 37 |
| CGCCTGC | 100 | 4.1248483E-4 | 15.77033 | 1 |
| CTTCGTA | 115 | 6.781965E-5 | 15.651468 | 7 |
| TCTTCGT | 120 | 9.6362724E-5 | 15.020235 | 6 |
| GGATCGC | 90 | 0.0037193974 | 15.020234 | 6 |
| TCGTTGG | 135 | 1.563185E-5 | 15.017617 | 4 |
| CCGAGAC | 90 | 0.0037583825 | 14.996714 | 45 |
| CGTTGGA | 140 | 2.2005042E-5 | 14.483797 | 5 |
| CGGGATT | 125 | 1.3823916E-4 | 14.396845 | 14 |
| TTCGTTG | 160 | 4.9589908E-6 | 14.079834 | 3 |
| CCTTCGT | 130 | 1.9042898E-4 | 13.864027 | 1 |
| ACGGGAT | 145 | 4.8553012E-4 | 12.411074 | 13 |
| TGAGCCG | 200 | 3.6681631E-6 | 12.372289 | 45 |
| AGGCCGA | 240 | 1.7152524E-7 | 12.184831 | 42 |