Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390611.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 263006 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCCAACG | 30 | 1.1286695E-4 | 37.549824 | 5 |
| CCCGGCT | 25 | 0.0021061695 | 35.993004 | 15 |
| CGGCTAA | 30 | 0.005145014 | 29.99417 | 17 |
| ACGAAGG | 30 | 0.005145014 | 29.99417 | 9 |
| CGTTTCC | 55 | 1.343324E-4 | 24.601488 | 1 |
| GTCAGGC | 50 | 0.0022625576 | 22.495626 | 6 |
| AACGAAG | 50 | 0.0022625576 | 22.495626 | 8 |
| CCAACGA | 50 | 0.0022625576 | 22.495626 | 6 |
| CAACGAA | 60 | 0.0065047564 | 18.746355 | 7 |
| CCACGCC | 60 | 0.0065047564 | 18.746355 | 10 |
| ACTAGAC | 110 | 8.569953E-4 | 14.3154 | 19 |
| GGCTAAT | 115 | 0.0011992257 | 13.692991 | 18 |
| GCACTCC | 125 | 0.0022468162 | 12.597551 | 16 |
| ATATCTT | 255 | 2.737579E-8 | 12.369353 | 3 |
| TGCACTC | 170 | 1.3725004E-4 | 11.90945 | 15 |
| GCTAATT | 180 | 2.3352691E-4 | 11.247813 | 19 |
| TACTAAA | 145 | 0.006810783 | 10.859959 | 9 |
| TATCTTC | 275 | 1.1208793E-5 | 9.831226 | 4 |
| AATATCT | 310 | 4.479398E-6 | 9.44982 | 2 |
| AAATATC | 390 | 7.9505844E-5 | 7.5171204 | 1 |