Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379029.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1168129 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 75 | 1.7043931E-9 | 29.999456 | 44 |
| ATCTCGT | 80 | 3.3960532E-9 | 28.12449 | 40 |
| TCGGATA | 40 | 6.166858E-4 | 28.12449 | 27 |
| TCGTATG | 80 | 3.3960532E-9 | 28.12449 | 43 |
| AGACCGC | 85 | 6.4828782E-9 | 26.47011 | 28 |
| TCACGAC | 45 | 0.0012266958 | 24.999548 | 28 |
| GACCGCC | 85 | 1.8940409E-7 | 23.8231 | 29 |
| ACGCCCG | 50 | 0.0022648696 | 22.499594 | 12 |
| CTCGTAT | 100 | 3.6452548E-8 | 22.499594 | 42 |
| AGCGGTT | 110 | 4.0545274E-9 | 22.499594 | 7 |
| TCTCGTA | 100 | 3.6452548E-8 | 22.499594 | 41 |
| GCGGTTC | 105 | 6.109258E-8 | 21.428185 | 8 |
| CCGCCAA | 105 | 6.109258E-8 | 21.428185 | 31 |
| ACCGCCA | 95 | 5.5328564E-7 | 21.315405 | 30 |
| CGGTTCA | 115 | 1.5957085E-7 | 19.564863 | 9 |
| CGGAAGA | 130 | 2.7661372E-8 | 19.042192 | 1 |
| GAGCGGT | 130 | 2.7703209E-8 | 19.039747 | 6 |
| GAGACCG | 120 | 2.4972178E-7 | 18.749662 | 27 |
| AATCTCG | 155 | 1.09030225E-8 | 17.419039 | 39 |
| CCACGCC | 195 | 3.45608E-11 | 17.30738 | 10 |