Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379336.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1886344 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGATAG | 190 | 0.0 | 35.525814 | 31 |
| CGATAGA | 190 | 0.0 | 35.525814 | 32 |
| ACCGATA | 195 | 0.0 | 34.614895 | 30 |
| GACCGAT | 205 | 0.0 | 32.926365 | 29 |
| CTCGTAT | 215 | 0.0 | 32.44226 | 42 |
| CGTATGC | 220 | 0.0 | 30.682198 | 44 |
| AGAGCGG | 235 | 0.0 | 30.640303 | 5 |
| AGCGGTT | 245 | 0.0 | 29.38734 | 7 |
| TCGTATG | 240 | 0.0 | 29.062859 | 43 |
| TCTCGTA | 235 | 0.0 | 28.722998 | 41 |
| GAGCGGT | 255 | 0.0 | 28.237139 | 6 |
| GCGGTTC | 255 | 0.0 | 28.234894 | 8 |
| TATCTCG | 245 | 0.0 | 27.55063 | 39 |
| ATCTCGT | 260 | 0.0 | 26.826542 | 40 |
| CGGTTCA | 280 | 0.0 | 26.517483 | 9 |
| AGACCGA | 265 | 0.0 | 26.320381 | 28 |
| AATGCCG | 285 | 0.0 | 25.262802 | 21 |
| CGGAAGA | 305 | 0.0 | 24.347145 | 1 |
| GAGACCG | 290 | 0.0 | 24.051386 | 27 |
| ATGCCGA | 305 | 0.0 | 23.606224 | 22 |