Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390721.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 672821 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGATCGG | 80 | 2.9782823E-6 | 22.494278 | 17 |
| GTGTGCG | 55 | 0.003942366 | 20.447823 | 31 |
| GATCGGA | 90 | 8.261042E-6 | 19.994913 | 18 |
| ATCGGAA | 90 | 8.261042E-6 | 19.994913 | 19 |
| CCTTCGT | 95 | 1.2939365E-5 | 18.98205 | 1 |
| CTTCGTT | 85 | 1.18673895E-4 | 18.56333 | 2 |
| CCGAGAC | 100 | 2.0503749E-5 | 17.994085 | 45 |
| TCGGAAG | 105 | 3.1181065E-5 | 17.137222 | 20 |
| GAGCCGA | 120 | 5.1828683E-6 | 16.869455 | 40 |
| GCCACCG | 115 | 6.662256E-5 | 15.683161 | 6 |
| GAACCCG | 145 | 1.8108021E-6 | 15.513293 | 15 |
| AACCCGG | 150 | 2.5764566E-6 | 14.996185 | 16 |
| ACCCGGG | 150 | 2.5764566E-6 | 14.996185 | 17 |
| CGGGATT | 90 | 0.003758121 | 14.996184 | 14 |
| AGCCGAG | 150 | 2.5784484E-6 | 14.995071 | 41 |
| CGGAAGA | 120 | 9.769923E-5 | 14.99507 | 21 |
| AGCGGTT | 120 | 9.769923E-5 | 14.99507 | 27 |
| TGAGCCG | 145 | 3.1102067E-5 | 13.960928 | 39 |
| GCGGTTC | 130 | 1.929632E-4 | 13.841604 | 28 |
| GACCCAC | 100 | 0.0075631645 | 13.4955635 | 23 |