Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378752.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 603484 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 35 | 1.2108649E-7 | 44.99892 | 44 |
| CGGATCG | 45 | 8.692441E-7 | 34.99916 | 32 |
| CTCGTAT | 55 | 1.1264456E-7 | 32.72649 | 42 |
| GCGGTTC | 50 | 1.9799263E-6 | 31.499249 | 8 |
| GGATCGA | 50 | 1.9799263E-6 | 31.499249 | 33 |
| TCTCGTA | 50 | 1.9799263E-6 | 31.499249 | 41 |
| CGAATCT | 50 | 1.9799263E-6 | 31.499249 | 37 |
| TCGTATG | 60 | 2.4162728E-7 | 29.99928 | 43 |
| ACCGGAT | 55 | 4.1614057E-6 | 28.635677 | 30 |
| GATCGAA | 55 | 4.1614057E-6 | 28.635677 | 34 |
| CCGGATC | 55 | 4.1614057E-6 | 28.635677 | 31 |
| CGGTTCA | 60 | 8.1846465E-6 | 26.24937 | 9 |
| GACCGGA | 60 | 8.1846465E-6 | 26.24937 | 29 |
| AGACCGG | 60 | 8.1846465E-6 | 26.24937 | 28 |
| TCGAATC | 60 | 8.1846465E-6 | 26.24937 | 36 |
| AAGAGCG | 65 | 1.5214986E-5 | 24.232195 | 4 |
| ATCTCGT | 65 | 1.5224756E-5 | 24.230188 | 40 |
| GAGCGGT | 70 | 2.6990163E-5 | 22.501326 | 6 |
| AGCGGTT | 70 | 2.7007449E-5 | 22.49946 | 7 |
| CGAGGTT | 55 | 0.0039292886 | 20.45914 | 3 |