Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379054.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 687539 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGAGAC | 50 | 1.0804797E-9 | 40.49843 | 25 |
| AGAGCGG | 65 | 9.094947E-12 | 38.08376 | 5 |
| GACCGGC | 60 | 1.546141E-10 | 37.498543 | 29 |
| TCTCGTA | 60 | 1.546141E-10 | 37.498543 | 41 |
| AGACCGG | 60 | 1.546141E-10 | 37.498543 | 28 |
| GAGCGGT | 65 | 3.6561687E-10 | 34.621597 | 6 |
| CCGCGAT | 65 | 3.6743586E-10 | 34.614044 | 35 |
| AGATCGC | 35 | 2.813836E-4 | 32.153305 | 3 |
| CTCGTAT | 70 | 8.1308826E-10 | 32.14161 | 42 |
| AGCGGTT | 70 | 8.1308826E-10 | 32.14161 | 7 |
| CGTATGC | 65 | 1.4024408E-8 | 31.15264 | 44 |
| GAGACCG | 65 | 1.4024408E-8 | 31.15264 | 27 |
| AAGAGCG | 75 | 1.6971171E-9 | 30.005383 | 4 |
| GCGGTTC | 75 | 1.7025741E-9 | 29.998835 | 8 |
| GCCGCGA | 75 | 1.7025741E-9 | 29.998835 | 34 |
| ACCGGCC | 85 | 2.0372681E-10 | 29.116518 | 30 |
| TCGTATG | 70 | 2.8838258E-8 | 28.927448 | 43 |
| CGGAAGA | 85 | 6.4501364E-9 | 26.479189 | 1 |
| CCGGCCG | 85 | 6.4737833E-9 | 26.469563 | 31 |
| ATGCCGA | 85 | 6.4737833E-9 | 26.469563 | 22 |