Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390719.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 802506 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCGGA | 65 | 3.6925485E-10 | 34.604362 | 18 |
| CTCGTAT | 45 | 3.4971392E-5 | 29.990448 | 42 |
| TTGCGTC | 30 | 0.005154365 | 29.990446 | 16 |
| TCGGAAG | 70 | 2.8929207E-8 | 28.91936 | 20 |
| ATCGGAA | 80 | 3.4033292E-9 | 28.116043 | 19 |
| AGATCGG | 75 | 5.6521458E-8 | 26.991404 | 17 |
| CGTATGC | 50 | 7.171281E-5 | 26.991404 | 44 |
| TCTCGTA | 50 | 7.171281E-5 | 26.991404 | 41 |
| ACCGCCA | 75 | 1.7012899E-6 | 23.99236 | 30 |
| AGCTCCG | 80 | 2.9811308E-6 | 22.492836 | 35 |
| GACCGCC | 60 | 2.471932E-4 | 22.492834 | 29 |
| GCTCCGC | 60 | 2.471932E-4 | 22.492834 | 36 |
| CCGCCAT | 85 | 5.0429753E-6 | 21.169727 | 31 |
| ACGCCCG | 55 | 0.0039427844 | 20.448032 | 12 |
| CGACATA | 55 | 0.0039427844 | 20.448032 | 20 |
| GCGGTTC | 100 | 9.0756294E-7 | 20.243551 | 28 |
| CGCCCGG | 90 | 8.268882E-6 | 19.993631 | 13 |
| AGCGGTT | 105 | 1.4488705E-6 | 19.279573 | 27 |
| TCGTATG | 70 | 6.995935E-4 | 19.279573 | 43 |
| CAAGGCG | 60 | 0.0065208036 | 18.744028 | 13 |