Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379308.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 447047 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 30 | 2.162773E-6 | 44.999218 | 44 |
| GCGGTTC | 35 | 6.240469E-6 | 38.57076 | 8 |
| GAGCGGT | 35 | 6.240469E-6 | 38.57076 | 6 |
| AGCGGTT | 40 | 1.5586278E-5 | 33.749413 | 7 |
| CCGAGAC | 40 | 1.5586278E-5 | 33.749413 | 25 |
| TCGTATG | 40 | 1.5586278E-5 | 33.749413 | 43 |
| AGAGCGG | 40 | 1.5586278E-5 | 33.749413 | 5 |
| TGCGTCC | 30 | 0.0051443707 | 29.99948 | 16 |
| ATCTCGT | 45 | 3.486537E-5 | 29.999477 | 40 |
| ACCGAGT | 45 | 3.486537E-5 | 29.999477 | 30 |
| GACCGAG | 50 | 7.1496295E-5 | 26.999529 | 29 |
| AGACCGA | 50 | 7.1496295E-5 | 26.999529 | 28 |
| CGGTTCA | 60 | 8.178024E-6 | 26.249544 | 9 |
| AATGCCG | 55 | 1.3665378E-4 | 24.545029 | 21 |
| CCGAGTT | 55 | 1.3665378E-4 | 24.545029 | 31 |
| ATGCCGA | 55 | 1.3665378E-4 | 24.545029 | 22 |
| AAGAGCG | 60 | 2.4626625E-4 | 22.502127 | 4 |
| CTCGTAT | 60 | 2.464528E-4 | 22.499609 | 42 |
| CGAGTTG | 60 | 2.464528E-4 | 22.499609 | 32 |
| TCTCGTA | 60 | 2.464528E-4 | 22.499609 | 41 |