Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390693.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 933492 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GGACCGA | 25 | 0.0021095295 | 35.99087 | 22 |
| CAACCCG | 65 | 4.2446674E-4 | 20.763966 | 40 |
| GATCGGA | 70 | 6.9940474E-4 | 19.280825 | 18 |
| AAATCGA | 60 | 0.006517122 | 18.74625 | 11 |
| AACCCGC | 60 | 0.0065191374 | 18.745245 | 41 |
| CGGAAGC | 80 | 0.0017134247 | 16.87072 | 25 |
| AGCGCTC | 95 | 2.822946E-4 | 16.575632 | 7 |
| AGATCGG | 85 | 0.0025690228 | 15.878326 | 17 |
| ACGGAAG | 100 | 4.1740376E-4 | 15.746007 | 24 |
| CCTTCGT | 90 | 0.0037129077 | 15.0243635 | 1 |
| GCGCTCC | 105 | 6.0445204E-4 | 14.997001 | 8 |
| ATCGGAA | 90 | 0.0037595548 | 14.996197 | 19 |
| AAAGCGC | 140 | 2.1951859E-5 | 14.48778 | 5 |
| TCGGAAG | 95 | 0.005384061 | 14.2069235 | 20 |
| CGGTTCA | 130 | 1.9296646E-4 | 13.842643 | 29 |
| ATCTTCG | 115 | 0.0011868483 | 13.717897 | 5 |
| CCGAGAC | 100 | 0.007562291 | 13.496577 | 45 |
| AAGCGCT | 155 | 5.7197714E-5 | 13.085737 | 6 |
| CTACTCG | 210 | 4.5171873E-7 | 12.853883 | 32 |
| TCGTTGG | 150 | 6.3624757E-4 | 12.0188465 | 4 |