Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378721.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 947703 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGGACA | 30 | 0.005147635 | 29.999016 | 43 |
| ATACGCC | 30 | 0.005147635 | 29.999016 | 17 |
| CGGAAGC | 90 | 1.8657092E-4 | 17.499426 | 25 |
| ACGGAAG | 80 | 0.0017109213 | 16.874447 | 24 |
| CGTTGGA | 110 | 4.6311558E-5 | 16.36569 | 5 |
| ACCACGC | 155 | 3.616764E-6 | 14.515653 | 9 |
| TCTTCGT | 135 | 2.6507283E-4 | 13.333599 | 7 |
| CCTTCGT | 125 | 0.0022471116 | 12.602911 | 1 |
| CGCCCAG | 125 | 0.002251569 | 12.599586 | 13 |
| GAGCCGA | 175 | 1.8043761E-4 | 11.571049 | 40 |
| ACTAGAC | 545 | 0.0 | 11.559254 | 19 |
| CCACGCC | 195 | 3.84312E-5 | 11.538082 | 10 |
| TCGTTGG | 160 | 0.0011064163 | 11.251412 | 4 |
| CGCCACC | 140 | 0.005250081 | 11.251411 | 5 |
| CACGCCC | 160 | 0.0011078826 | 11.249631 | 11 |
| GAACCCG | 180 | 2.3439965E-4 | 11.249631 | 15 |
| TAGACAG | 750 | 0.0 | 11.099636 | 21 |
| GAAGCAT | 695 | 0.0 | 11.006833 | 27 |
| TTCGTTG | 165 | 0.001428892 | 10.912187 | 3 |
| AGCCGAG | 165 | 0.001432673 | 10.908732 | 41 |