Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390738.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 731772 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGCTA | 35 | 2.8249898E-4 | 32.131973 | 30 |
| CCGCTAC | 35 | 2.8249898E-4 | 32.131973 | 31 |
| CGTATGC | 40 | 6.176206E-4 | 28.115477 | 44 |
| CGCTACA | 50 | 7.171417E-5 | 26.990858 | 32 |
| AGACCGC | 45 | 0.0012280624 | 24.993242 | 28 |
| GACCGCT | 45 | 0.0012285517 | 24.991535 | 29 |
| GAGACCG | 55 | 0.003941358 | 20.449017 | 27 |
| CTTCGTA | 80 | 7.5659686E-5 | 19.68487 | 7 |
| TCGTTGG | 105 | 3.062716E-5 | 17.173428 | 4 |
| CCCGGGT | 85 | 0.0025697707 | 15.876974 | 31 |
| TGAGCCG | 135 | 1.5850603E-5 | 14.994922 | 39 |
| CGTTGGA | 125 | 1.356248E-4 | 14.428644 | 5 |
| TTCGTAT | 95 | 0.0053783082 | 14.208628 | 8 |
| AGCCGAG | 160 | 5.0377894E-6 | 14.057738 | 41 |
| CCGAGAT | 160 | 5.0377894E-6 | 14.057738 | 43 |
| TCTTCGT | 115 | 0.0011831592 | 13.722896 | 6 |
| GAGCCGA | 155 | 5.822637E-5 | 13.060092 | 40 |
| ATCTTCG | 125 | 0.0022168248 | 12.625064 | 5 |
| CGTGAGC | 130 | 0.0029781216 | 12.137821 | 1 |
| TTCGTTG | 130 | 0.0029796502 | 12.1369915 | 3 |