Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379313.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 342224 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGGGA | 35 | 6.235574E-6 | 38.571304 | 30 |
| CTCGTAT | 35 | 6.235574E-6 | 38.571304 | 42 |
| AGCGGTT | 35 | 6.235574E-6 | 38.571304 | 7 |
| ATGCCGA | 35 | 6.235574E-6 | 38.571304 | 22 |
| TATCTCG | 40 | 1.5574125E-5 | 33.749893 | 39 |
| GAGCGGT | 40 | 1.5574125E-5 | 33.749893 | 6 |
| TCTCGTA | 40 | 1.5574125E-5 | 33.749893 | 41 |
| CGTATGC | 45 | 3.483836E-5 | 29.9999 | 44 |
| CGGTTCA | 45 | 3.483836E-5 | 29.9999 | 9 |
| AATGCCG | 45 | 3.483836E-5 | 29.9999 | 21 |
| AGACCGG | 45 | 3.483836E-5 | 29.9999 | 28 |
| CCGAGAC | 45 | 3.483836E-5 | 29.9999 | 25 |
| TCGTATG | 45 | 3.483836E-5 | 29.9999 | 43 |
| TGCCGAG | 45 | 3.483836E-5 | 29.9999 | 23 |
| GTATGCC | 65 | 4.8567017E-7 | 27.692219 | 45 |
| GCGGTTC | 50 | 7.144123E-5 | 26.999912 | 8 |
| CGGGAGT | 50 | 7.144123E-5 | 26.999912 | 32 |
| AGAGCGG | 50 | 7.144123E-5 | 26.999912 | 5 |
| GACCGGG | 60 | 8.169802E-6 | 26.249914 | 29 |
| GAGACCG | 55 | 1.3654918E-4 | 24.545376 | 27 |