Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390782.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 886150 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACGCAC | 20 | 7.0392777E-4 | 44.991085 | 29 |
| ACCGCGC | 30 | 0.005145936 | 30.000826 | 9 |
| CACCGCG | 45 | 0.0012261358 | 25.000689 | 8 |
| ATCGGAA | 55 | 1.3696979E-4 | 24.540592 | 19 |
| TCGGAAG | 65 | 1.5255782E-5 | 24.22597 | 20 |
| CGTATGC | 50 | 0.0022668114 | 22.495543 | 44 |
| GACCGGT | 50 | 0.0022668114 | 22.495543 | 29 |
| GATCGGA | 70 | 6.9910544E-4 | 19.281895 | 18 |
| ACCGGTG | 60 | 0.006516797 | 18.746284 | 30 |
| AGATCGG | 75 | 0.0011114273 | 17.996433 | 17 |
| CCGGTGA | 75 | 0.0011114273 | 17.996433 | 31 |
| ACCCCGT | 90 | 1.84784E-4 | 17.521248 | 6 |
| GCCACCG | 180 | 2.0372681E-10 | 17.521248 | 6 |
| ATCTTCG | 105 | 5.979603E-4 | 15.018212 | 5 |
| ACGGGAT | 125 | 1.3822132E-4 | 14.397148 | 13 |
| CGGTTCA | 110 | 8.583814E-4 | 14.318577 | 9 |
| CCGAGAC | 110 | 8.598493E-4 | 14.315346 | 25 |
| GAGCGGT | 95 | 0.0053316327 | 14.22778 | 6 |
| AGAGCGG | 95 | 0.0053316327 | 14.22778 | 5 |
| AACCCCG | 100 | 0.0074888654 | 13.516392 | 5 |