Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378675.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1348512 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 90 | 0.0 | 34.998703 | 42 |
| GCGGTTC | 110 | 0.0 | 30.678406 | 8 |
| CGTATGC | 105 | 0.0 | 29.998886 | 44 |
| ACCGCTT | 110 | 0.0 | 28.63424 | 30 |
| CCGCTTA | 120 | 0.0 | 26.249027 | 31 |
| TCGTATG | 125 | 1.8189894E-12 | 25.199064 | 43 |
| CGCTTAG | 125 | 1.8189894E-12 | 25.199064 | 32 |
| GACCGCT | 125 | 1.8189894E-12 | 25.198132 | 29 |
| AGACCGC | 135 | 0.0 | 24.998146 | 28 |
| TCTCGTA | 130 | 1.8189894E-12 | 24.229872 | 41 |
| TATCTCG | 135 | 3.6379788E-12 | 23.332468 | 39 |
| AGAGCGG | 145 | 9.094947E-12 | 21.733004 | 5 |
| AGCGGTT | 145 | 9.094947E-12 | 21.721722 | 7 |
| TGCCGAG | 150 | 1.4551915E-11 | 20.998444 | 23 |
| GAGCGGT | 165 | 6.002665E-11 | 19.098698 | 6 |
| CGGTTCA | 165 | 6.002665E-11 | 19.088785 | 9 |
| ATGCCGA | 165 | 6.002665E-11 | 19.088785 | 22 |
| ACGCCCG | 95 | 1.3173709E-5 | 18.945261 | 12 |
| ATCTCGT | 170 | 9.276846E-11 | 18.528725 | 40 |
| AATGCCG | 170 | 9.276846E-11 | 18.527351 | 21 |