Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378716.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 791641 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGGTA | 45 | 3.8380676E-10 | 45.000126 | 30 |
| CCGGTAT | 50 | 1.0804797E-9 | 40.497555 | 31 |
| GACCGGT | 55 | 2.746674E-9 | 36.818287 | 29 |
| AGACCGG | 60 | 6.4264896E-9 | 33.750095 | 28 |
| ATCTCGT | 65 | 1.4024408E-8 | 31.15393 | 40 |
| CGGTATC | 65 | 1.4031684E-8 | 31.151964 | 32 |
| GCGGTTC | 70 | 2.8838258E-8 | 28.928654 | 8 |
| GAGACCG | 70 | 2.8838258E-8 | 28.928654 | 27 |
| CGTATGC | 70 | 2.8854629E-8 | 28.926826 | 44 |
| AGCGGTT | 75 | 5.6343197E-8 | 27.000076 | 7 |
| TATCTCG | 75 | 5.6343197E-8 | 27.000076 | 39 |
| CTCGTAT | 75 | 5.6377758E-8 | 26.99837 | 42 |
| CGGTTCA | 80 | 1.0535405E-7 | 25.310972 | 9 |
| TCTCGTA | 80 | 1.0535405E-7 | 25.310972 | 41 |
| GAGCGGT | 85 | 1.8897481E-7 | 23.826609 | 6 |
| CCGAGAC | 85 | 1.89204E-7 | 23.823597 | 25 |
| TTCACGC | 50 | 0.0022647858 | 22.498642 | 14 |
| TCGTATG | 90 | 3.286168E-7 | 22.498642 | 43 |
| ATGCCGA | 95 | 5.5304554E-7 | 21.314503 | 22 |
| AATGCCG | 100 | 9.0528556E-7 | 20.248777 | 21 |