Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379320.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 451448 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TGTTTCG | 30 | 0.0051443577 | 29.999556 | 38 |
| GCCACCA | 260 | 1.7826096E-10 | 13.84595 | 6 |
| TACAAGT | 135 | 2.6466924E-4 | 13.333137 | 19 |
| ACTAGAC | 140 | 3.599351E-4 | 12.856954 | 19 |
| AACCAGC | 160 | 0.0011057575 | 11.249834 | 28 |
| GAGCCAC | 245 | 2.8796549E-6 | 11.021466 | 4 |
| CTAGACA | 220 | 1.3055344E-4 | 10.227122 | 20 |
| GCAGTGA | 260 | 6.6579545E-5 | 9.519091 | 41 |
| AGCCACC | 215 | 0.0012013302 | 9.418466 | 5 |
| ACCACAC | 195 | 0.0057095853 | 9.230633 | 9 |
| TATCTTC | 365 | 3.8599646E-6 | 8.630965 | 4 |
| CTGGTCT | 415 | 2.4527617E-6 | 8.135114 | 1 |
| AGTGAGC | 250 | 0.0047188466 | 8.09988 | 43 |
| CTCAGAA | 480 | 2.821016E-7 | 7.968632 | 35 |
| TGAGCCA | 400 | 1.3191238E-5 | 7.875756 | 3 |
| ATTCTCA | 515 | 1.0335498E-7 | 7.863962 | 32 |
| CCACCAC | 345 | 1.6391018E-4 | 7.8259716 | 7 |
| TAGACAG | 260 | 0.0067112115 | 7.7883472 | 21 |
| GCATTCT | 350 | 1.9362597E-4 | 7.7141714 | 30 |
| GCTAATT | 265 | 0.007958745 | 7.6413965 | 19 |