Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379225.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 728183 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 40 | 3.4532968E-7 | 39.378784 | 44 |
| TCTCGTA | 40 | 3.4570076E-7 | 39.37338 | 41 |
| GAGACCG | 50 | 1.9809377E-6 | 31.498701 | 27 |
| AGAGCGG | 55 | 4.1590665E-6 | 28.639116 | 5 |
| GCGGTTC | 55 | 4.1635158E-6 | 28.635183 | 8 |
| GAGCGGT | 55 | 4.1635158E-6 | 28.635183 | 6 |
| CTCGTAT | 60 | 8.188777E-6 | 26.248919 | 42 |
| AGCGGTT | 60 | 8.188777E-6 | 26.248919 | 7 |
| CGAGGTA | 60 | 8.188777E-6 | 26.248919 | 32 |
| TCGTATG | 60 | 8.188777E-6 | 26.248919 | 43 |
| ACCGAGG | 65 | 1.523241E-5 | 24.22977 | 30 |
| AATGCCG | 65 | 1.523241E-5 | 24.22977 | 21 |
| AGACCGA | 65 | 1.523241E-5 | 24.22977 | 28 |
| ACCGCGC | 60 | 2.4669917E-4 | 22.499073 | 9 |
| CACCGCG | 60 | 2.4669917E-4 | 22.499073 | 8 |
| GACCGAG | 75 | 4.6011173E-5 | 20.999136 | 29 |
| ATGCCGA | 75 | 4.6011173E-5 | 20.999136 | 22 |
| TGCCGAG | 75 | 4.6011173E-5 | 20.999136 | 23 |
| ATGCCCG | 55 | 0.003936113 | 20.453703 | 12 |
| AAGAGCG | 80 | 7.540602E-5 | 19.69345 | 4 |