Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390708.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 907267 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGTG | 60 | 0.0065200115 | 18.744743 | 29 |
| ACGGGAT | 125 | 7.638948E-6 | 16.196348 | 13 |
| ACCGTGA | 85 | 0.00256941 | 15.877898 | 30 |
| TCGCTTG | 205 | 2.1816959E-8 | 14.265078 | 15 |
| ATGCCCG | 95 | 0.005384868 | 14.206541 | 12 |
| CGGGATT | 145 | 3.1095307E-5 | 13.96237 | 14 |
| CGCTTGA | 195 | 1.8324135E-7 | 13.843034 | 16 |
| CCGGCTA | 200 | 2.4948713E-7 | 13.496958 | 16 |
| GAGCCGA | 100 | 0.0075634234 | 13.496214 | 40 |
| ATCGCTT | 220 | 5.511538E-8 | 13.292459 | 14 |
| CGGCTCA | 215 | 6.010323E-7 | 12.554618 | 27 |
| AACGGGA | 165 | 1.0451648E-4 | 12.269285 | 12 |
| TCGTTGG | 190 | 2.9012914E-5 | 11.859699 | 4 |
| CGGCTAA | 190 | 2.9525108E-5 | 11.839437 | 17 |
| CTACTCG | 155 | 8.509309E-4 | 11.609647 | 32 |
| CGTTGGA | 195 | 3.7750695E-5 | 11.558157 | 5 |
| ACTAGAC | 375 | 3.8198777E-11 | 11.39743 | 19 |
| TTCGTTG | 200 | 4.9014205E-5 | 11.266092 | 3 |
| TCACCGT | 140 | 0.005254888 | 11.249945 | 8 |
| GTCAGTA | 140 | 0.0052635293 | 11.247464 | 19 |