Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379332.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 340743 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 40 | 3.449295E-7 | 39.3741 | 44 |
| GACCGGA | 40 | 3.449295E-7 | 39.3741 | 29 |
| ATCTCGT | 45 | 8.677598E-7 | 34.999203 | 40 |
| GAGACCG | 45 | 8.677598E-7 | 34.999203 | 27 |
| CGGAAAG | 50 | 1.9765666E-6 | 31.499279 | 32 |
| GCGGTTC | 50 | 1.9765666E-6 | 31.499279 | 8 |
| CCGGAAA | 50 | 1.9765666E-6 | 31.499279 | 31 |
| AATGCCG | 50 | 1.9765666E-6 | 31.499279 | 21 |
| AGACCGG | 50 | 1.9765666E-6 | 31.499279 | 28 |
| ATGCCGA | 50 | 1.9765666E-6 | 31.499279 | 22 |
| ACCGGAA | 55 | 4.154379E-6 | 28.635712 | 30 |
| CTCGTAT | 55 | 4.154379E-6 | 28.635712 | 42 |
| CGGTTCA | 55 | 4.154379E-6 | 28.635712 | 9 |
| TCTCGTA | 55 | 4.154379E-6 | 28.635712 | 41 |
| TCGTATG | 55 | 4.154379E-6 | 28.635712 | 43 |
| GAGCGGT | 60 | 8.170908E-6 | 26.249401 | 6 |
| AATCTCG | 60 | 8.170908E-6 | 26.249401 | 39 |
| AAGAGCG | 70 | 9.265332E-7 | 25.717472 | 4 |
| AGCGGTT | 65 | 1.51993445E-5 | 24.230219 | 7 |
| TGCCGAG | 65 | 1.51993445E-5 | 24.230219 | 23 |