Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390761.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 950339 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGCCCG | 65 | 4.886151E-7 | 27.683048 | 12 |
| TCGGAAG | 85 | 6.501068E-9 | 26.461737 | 20 |
| AGATCGG | 80 | 1.05626896E-7 | 25.305367 | 17 |
| GATCGGA | 85 | 1.8980973E-7 | 23.816816 | 18 |
| CGCCCGG | 120 | 4.5292836E-10 | 22.493658 | 13 |
| CCGAGAC | 130 | 5.0931703E-11 | 22.492476 | 45 |
| ATCGGAA | 105 | 6.123264E-8 | 21.422533 | 19 |
| GCGGTTC | 130 | 1.2314558E-9 | 20.762285 | 28 |
| ATCTTCG | 125 | 1.724402E-8 | 19.841402 | 5 |
| CGTATAA | 95 | 1.3174435E-5 | 18.944023 | 10 |
| GCCCGGC | 200 | 1.8189894E-12 | 17.994926 | 14 |
| CGGTTCA | 125 | 3.8449616E-7 | 17.993982 | 29 |
| CCGGCTA | 180 | 2.0736479E-10 | 17.49507 | 16 |
| GAGCGGT | 120 | 5.1876887E-6 | 16.869356 | 26 |
| TCGTATA | 110 | 4.6431687E-5 | 16.360746 | 9 |
| CACGCCC | 140 | 1.2571381E-6 | 16.067745 | 11 |
| AAGAGCG | 130 | 1.1094997E-5 | 15.571714 | 24 |
| AGAGCGG | 130 | 1.1094997E-5 | 15.571714 | 25 |
| ACCACGC | 190 | 8.007191E-9 | 15.392019 | 9 |
| CGGCTAA | 190 | 8.018105E-9 | 15.390399 | 17 |