Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390783.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 737162 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 35 | 2.8258443E-4 | 32.130356 | 42 |
| TCTCGTA | 35 | 2.8258443E-4 | 32.130356 | 41 |
| CACGTAG | 30 | 0.0050912118 | 30.065826 | 4 |
| CGTATGC | 40 | 6.1780674E-4 | 28.114063 | 44 |
| ATACGGA | 40 | 6.1780674E-4 | 28.114063 | 29 |
| TCGTATG | 45 | 0.0012289208 | 24.990276 | 43 |
| ATCTCGT | 50 | 0.0022689677 | 22.49125 | 40 |
| GACCGAG | 70 | 2.7094233E-5 | 22.49125 | 29 |
| GAGACCG | 50 | 0.0022689677 | 22.49125 | 27 |
| AGACCGA | 70 | 2.7094233E-5 | 22.49125 | 28 |
| ACCGAGA | 75 | 4.613564E-5 | 20.991833 | 30 |
| GACCTCG | 80 | 0.0017145155 | 16.868437 | 39 |
| GCGCCAC | 85 | 0.002526765 | 15.917203 | 4 |
| CGCCACC | 110 | 8.4289175E-4 | 14.352528 | 5 |
| GCCACCG | 95 | 0.0052888496 | 14.244614 | 6 |
| GGACCAC | 100 | 0.007567084 | 13.49475 | 42 |
| CCAACGA | 140 | 3.5315254E-4 | 12.887983 | 6 |
| CGAAATC | 125 | 0.0022533275 | 12.597664 | 10 |
| AACGAAA | 150 | 6.454185E-4 | 11.997775 | 8 |
| CAACGAA | 180 | 2.345972E-4 | 11.247914 | 7 |