Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379075.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 954555 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGTCG | 65 | 0.0 | 41.536285 | 30 |
| GAGCGGT | 70 | 0.0 | 38.57749 | 6 |
| CTCGTAT | 65 | 9.094947E-12 | 38.07493 | 42 |
| CCGTCGG | 75 | 1.8189894E-12 | 35.998116 | 31 |
| GACCGTC | 80 | 3.6379788E-12 | 33.74823 | 29 |
| CGTCGGC | 80 | 3.6379788E-12 | 33.74823 | 32 |
| CGGTTCA | 85 | 5.456968E-12 | 31.76304 | 9 |
| AGACCGT | 85 | 5.456968E-12 | 31.76304 | 28 |
| GCGGTTC | 80 | 1.0004442E-10 | 30.9375 | 8 |
| CGTATGC | 80 | 1.0004442E-10 | 30.935879 | 44 |
| TCGTATG | 80 | 1.0004442E-10 | 30.935879 | 43 |
| AGAGCGG | 75 | 1.6989361E-9 | 30.006287 | 5 |
| ACGACCT | 30 | 0.005148145 | 29.99843 | 38 |
| CGGCAAT | 100 | 1.8189894E-12 | 29.248466 | 35 |
| AGCGGTT | 85 | 2.0372681E-10 | 29.117647 | 7 |
| TCTCGTA | 85 | 2.0372681E-10 | 29.116121 | 41 |
| CGGAAGA | 90 | 3.929017E-10 | 27.51153 | 1 |
| GAGACCG | 90 | 3.965397E-10 | 27.49856 | 27 |
| GTCGGCA | 100 | 4.5474735E-11 | 26.998585 | 33 |
| TCGGCAA | 115 | 9.094947E-12 | 25.433449 | 34 |