Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379280.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 470425 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGCCCA | 75 | 0.0011094434 | 17.998682 | 12 |
| AGGCCGA | 105 | 3.1052256E-5 | 17.143425 | 42 |
| CCGAGGC | 95 | 2.8164886E-4 | 16.577734 | 45 |
| GAGGCCG | 120 | 9.7299344E-5 | 15.000496 | 41 |
| GCCGAGG | 105 | 6.030817E-4 | 14.998902 | 44 |
| GGCCGAG | 120 | 9.738757E-5 | 14.998901 | 43 |
| CACGCCC | 110 | 8.579817E-4 | 14.317134 | 11 |
| ACCACGC | 145 | 3.0988296E-5 | 13.964494 | 9 |
| CCACGCC | 165 | 1.0410845E-4 | 12.271829 | 10 |
| GCCACCA | 350 | 1.3460522E-10 | 11.571812 | 6 |
| TTAGTAG | 275 | 8.024472E-8 | 11.454925 | 35 |
| GTAGAGA | 340 | 1.020453E-9 | 11.250373 | 38 |
| CACCACG | 160 | 0.0011064499 | 11.249176 | 8 |
| AGTAGAG | 305 | 2.818524E-8 | 11.06594 | 37 |
| TAGTAGA | 290 | 1.6727427E-7 | 10.862429 | 36 |
| GCTAATT | 360 | 2.6302587E-9 | 10.624222 | 19 |
| TGCCACC | 205 | 7.756613E-4 | 9.879426 | 5 |
| GGATGGT | 195 | 0.005693118 | 9.234019 | 3 |
| TAGAGAC | 300 | 3.2016113E-5 | 9.000298 | 39 |
| CAGCTAA | 275 | 1.2289247E-4 | 8.999342 | 17 |