Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379065.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 654830 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGTATG | 80 | 0.0 | 39.373196 | 43 |
| ATCTCGT | 80 | 0.0 | 36.56082 | 40 |
| CGTATGC | 85 | 0.0 | 34.41019 | 44 |
| CCGATCT | 85 | 0.0 | 34.41019 | 31 |
| TATCTCG | 85 | 0.0 | 34.41019 | 39 |
| CGATCTA | 85 | 0.0 | 34.41019 | 32 |
| GACCGAT | 90 | 0.0 | 32.498512 | 29 |
| CTCGTAT | 100 | 1.8189894E-12 | 29.248661 | 42 |
| CGGAAGA | 120 | 0.0 | 26.258823 | 1 |
| GCGGTTC | 105 | 8.367351E-11 | 25.713108 | 8 |
| ATGCCGA | 105 | 8.367351E-11 | 25.713108 | 22 |
| GAGCGGT | 115 | 9.094947E-12 | 25.44139 | 6 |
| ACCGATC | 115 | 9.094947E-12 | 25.433619 | 30 |
| AGCGGTT | 115 | 9.094947E-12 | 25.433619 | 7 |
| AGACCGA | 120 | 1.6370905E-11 | 24.373884 | 28 |
| AGAGCGG | 115 | 2.6375346E-10 | 23.484358 | 5 |
| CCGAGAC | 115 | 2.6557245E-10 | 23.477186 | 25 |
| TGCCGAG | 115 | 2.6557245E-10 | 23.477186 | 23 |
| CGGTTCA | 125 | 2.910383E-11 | 23.398928 | 9 |
| AATGCCG | 120 | 4.5110937E-10 | 22.49897 | 21 |