Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379071.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 922361 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGACCCG | 25 | 0.002107055 | 35.999435 | 25 |
| GAGCGGT | 70 | 8.1308826E-10 | 32.144096 | 6 |
| TCTCGTA | 75 | 5.637412E-8 | 26.999577 | 41 |
| AGACCGC | 85 | 6.4792403E-9 | 26.470175 | 28 |
| CGTATGC | 80 | 1.0534859E-7 | 25.312105 | 44 |
| CTCGTAT | 80 | 1.0534859E-7 | 25.312105 | 42 |
| TTGCGCC | 45 | 0.0012260954 | 25.000965 | 6 |
| GCGGTTC | 90 | 1.1905286E-8 | 24.999609 | 8 |
| CGTGACT | 45 | 0.0012264829 | 24.999609 | 15 |
| AGCGGTT | 90 | 1.1905286E-8 | 24.999609 | 7 |
| CCGAGAC | 85 | 1.893095E-7 | 23.823156 | 25 |
| AGAGCGG | 100 | 3.6408892E-8 | 22.500868 | 5 |
| GACCGCA | 90 | 3.2859862E-7 | 22.499647 | 29 |
| CGGAAGA | 115 | 6.7484507E-9 | 21.526072 | 1 |
| CGGTTCA | 105 | 6.10562E-8 | 21.428236 | 9 |
| CCGCAGA | 95 | 5.53011E-7 | 21.315456 | 31 |
| TGCCGAG | 95 | 5.53011E-7 | 21.315456 | 23 |
| GACCCGC | 55 | 0.003936314 | 20.454226 | 26 |
| TCGTATG | 100 | 9.052292E-7 | 20.249683 | 43 |
| ACCGCAG | 105 | 1.4451525E-6 | 19.285412 | 30 |