Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390744.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 844897 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCGGA | 95 | 0.0 | 30.78417 | 18 |
| GTGCGCC | 40 | 6.1220233E-4 | 28.158485 | 2 |
| CCGAGAC | 120 | 0.0 | 26.243925 | 45 |
| TCGGAAG | 120 | 1.6370905E-11 | 24.369358 | 20 |
| AGATCGG | 125 | 2.910383E-11 | 23.39597 | 17 |
| ATCGGAA | 125 | 2.910383E-11 | 23.39597 | 19 |
| CGGAAGA | 125 | 2.910383E-11 | 23.394585 | 21 |
| AGAGCGG | 145 | 9.094947E-12 | 21.720396 | 25 |
| GCGGTTC | 150 | 1.4551915E-11 | 20.996382 | 28 |
| CGGTTCA | 150 | 1.4551915E-11 | 20.99514 | 29 |
| CGAGTAG | 100 | 8.936131E-7 | 20.276512 | 5 |
| CCGAGTA | 100 | 8.9513924E-7 | 20.27291 | 4 |
| CGAGATC | 180 | 0.0 | 19.996555 | 15 |
| TCCCGAG | 120 | 2.4636938E-7 | 18.772324 | 2 |
| AGCGGTT | 180 | 1.0913936E-11 | 18.74677 | 27 |
| GAGCGGT | 170 | 9.276846E-11 | 18.52622 | 26 |
| CCGAGAT | 170 | 9.276846E-11 | 18.52622 | 14 |
| GAGATCG | 160 | 8.1672624E-10 | 18.2781 | 16 |
| CGCCACC | 90 | 1.8463691E-4 | 17.522913 | 5 |
| AAGAGCG | 195 | 6.493792E-10 | 16.151062 | 24 |