Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379249.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 586142 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 60 | 1.546141E-10 | 37.499004 | 41 |
| CGGAAGA | 55 | 2.73576E-9 | 36.829773 | 1 |
| ATGCCGA | 70 | 8.1308826E-10 | 32.142002 | 22 |
| CTCGTAT | 75 | 1.7007551E-9 | 29.999203 | 42 |
| GAGACCG | 75 | 1.7007551E-9 | 29.999203 | 27 |
| AGACCGT | 75 | 1.7007551E-9 | 29.999203 | 28 |
| CCGAGAC | 75 | 1.7007551E-9 | 29.999203 | 25 |
| TCGTATG | 75 | 1.7007551E-9 | 29.999203 | 43 |
| ATCTCGT | 80 | 3.3887773E-9 | 28.124252 | 40 |
| GCGGTTC | 80 | 3.3887773E-9 | 28.124252 | 8 |
| GACCGTG | 80 | 3.3887773E-9 | 28.124252 | 29 |
| GAGCGGT | 80 | 3.3887773E-9 | 28.124252 | 6 |
| AAGAGCG | 75 | 5.6166755E-8 | 27.006195 | 4 |
| AGCGGTT | 85 | 6.4701453E-9 | 26.469885 | 7 |
| CGTATGC | 95 | 7.403287E-10 | 26.051939 | 44 |
| AGAGCGG | 80 | 1.0513577E-7 | 25.313986 | 5 |
| ACCGTGG | 90 | 1.1888915E-8 | 24.999336 | 30 |
| CGGTTCA | 95 | 2.1114829E-8 | 23.683582 | 9 |
| GACTCCG | 60 | 2.4616814E-4 | 22.505163 | 3 |
| AATGCCG | 100 | 3.637615E-8 | 22.499403 | 21 |