Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379259.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 624759 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 30 | 1.1393254E-4 | 37.500004 | 44 |
| CTCGTAT | 30 | 1.1393254E-4 | 37.500004 | 42 |
| TCTCGTA | 35 | 2.8189138E-4 | 32.142857 | 41 |
| ATCTCGT | 45 | 3.4883204E-5 | 30.0 | 40 |
| TATCTCG | 45 | 3.4883204E-5 | 30.0 | 39 |
| GAGACCG | 45 | 0.0012259281 | 25.0 | 27 |
| GCGGTTC | 50 | 0.0022634622 | 22.5 | 8 |
| CGGTTCA | 50 | 0.0022634622 | 22.5 | 9 |
| AGACCGG | 50 | 0.0022634622 | 22.5 | 28 |
| TCGTATG | 50 | 0.0022634622 | 22.5 | 43 |
| CACGCCC | 75 | 4.5983143E-5 | 21.000002 | 11 |
| CCGAGAC | 55 | 0.003934557 | 20.454546 | 25 |
| ATGCCGA | 55 | 0.003934557 | 20.454546 | 22 |
| GCCCGGC | 125 | 1.7635102E-8 | 19.8 | 14 |
| CGCCCGG | 80 | 7.555944E-5 | 19.6875 | 13 |
| ACCACGC | 130 | 2.7661372E-8 | 19.03846 | 9 |
| AGAGCGG | 60 | 0.006507247 | 18.750002 | 5 |
| CGGAAGA | 75 | 0.0011094522 | 18.000002 | 1 |
| AAGAGCG | 75 | 0.0011094522 | 18.000002 | 4 |
| CGGGAGT | 75 | 0.0011094522 | 18.000002 | 32 |