Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378751.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 593442 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 85 | 0.0 | 42.350643 | 42 |
| TCTCGTA | 85 | 0.0 | 42.350643 | 41 |
| CGGTACG | 80 | 0.0 | 42.18521 | 32 |
| CCGGTAC | 85 | 0.0 | 39.703728 | 31 |
| GTACGAA | 85 | 0.0 | 39.703728 | 34 |
| TCGTATG | 100 | 0.0 | 38.24792 | 43 |
| TACGAAT | 100 | 0.0 | 35.998043 | 35 |
| GGTACGA | 95 | 0.0 | 35.524387 | 33 |
| ACCGGTA | 95 | 0.0 | 35.524387 | 30 |
| ACGAATC | 95 | 0.0 | 35.524387 | 36 |
| AGAGCGG | 110 | 0.0 | 34.782562 | 5 |
| CGTATGC | 105 | 0.0 | 34.28385 | 44 |
| GACCGGT | 100 | 0.0 | 33.748165 | 29 |
| CGAATCT | 105 | 0.0 | 32.14111 | 37 |
| CGGAAGA | 115 | 0.0 | 31.313202 | 1 |
| GCGGTTC | 115 | 0.0 | 31.307924 | 8 |
| AGACCGG | 110 | 0.0 | 30.680151 | 28 |
| CATGCGC | 30 | 0.005138165 | 30.008486 | 1 |
| GAGCGGT | 120 | 0.0 | 30.005957 | 6 |
| ATCCGGG | 30 | 0.0051466417 | 29.998373 | 23 |