Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390673.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 495383 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CACCCGG | 30 | 0.0051508453 | 29.992393 | 13 |
| GATCGGA | 40 | 6.17029E-4 | 28.117872 | 18 |
| ACCCGGC | 45 | 0.0012273814 | 24.993664 | 14 |
| TATCTCG | 50 | 0.0022661407 | 22.494295 | 39 |
| AGATCGG | 60 | 0.006514916 | 18.745245 | 17 |
| ATCGGAA | 60 | 0.006514916 | 18.745245 | 19 |
| TCGGAAG | 60 | 0.0065187146 | 18.743355 | 20 |
| CGTTGGA | 90 | 1.833692E-4 | 17.53628 | 5 |
| TCGTTGG | 105 | 3.051891E-5 | 17.178396 | 4 |
| GGTTGCA | 210 | 1.8480932E-9 | 14.996198 | 37 |
| GATACTA | 110 | 8.599234E-4 | 14.3131075 | 21 |
| CCCCTAC | 95 | 0.0053829444 | 14.20549 | 10 |
| CCCTACA | 115 | 0.0012033032 | 13.690798 | 11 |
| ATACTAC | 115 | 0.0012033032 | 13.690798 | 22 |
| GTTGCAG | 220 | 5.4937118E-8 | 13.292084 | 38 |
| TATCTTC | 515 | 0.0 | 13.133968 | 4 |
| TACAAGC | 120 | 0.0016572527 | 13.121672 | 14 |
| GAAGCAT | 460 | 0.0 | 12.223927 | 27 |
| ATATCTT | 535 | 0.0 | 12.221546 | 3 |
| AGGTTGC | 205 | 4.8238326E-6 | 12.07011 | 36 |