Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378768.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 558363 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGAGCGG | 55 | 1.12522685E-7 | 32.729618 | 5 |
| GACCGAA | 55 | 1.12611815E-7 | 32.726685 | 29 |
| AGACCGA | 55 | 1.12611815E-7 | 32.726685 | 28 |
| CCGAGAC | 55 | 1.12611815E-7 | 32.726685 | 25 |
| GAGCGGT | 60 | 2.4136898E-7 | 30.002151 | 6 |
| CGTATGC | 60 | 2.4155815E-7 | 29.999462 | 44 |
| AGCGGTT | 60 | 2.4155815E-7 | 29.999462 | 7 |
| TCTCGTA | 60 | 2.4155815E-7 | 29.999462 | 41 |
| CAAGCCG | 30 | 0.0051454683 | 29.999462 | 18 |
| ATCTCGT | 65 | 4.866597E-7 | 27.691813 | 40 |
| GAGACCG | 65 | 4.866597E-7 | 27.691813 | 27 |
| CCTTCGT | 70 | 9.28012E-7 | 25.718431 | 1 |
| CGGAAGA | 70 | 9.28012E-7 | 25.718431 | 1 |
| CTCGTAT | 70 | 9.2946357E-7 | 25.713823 | 42 |
| CGTATAA | 70 | 9.2946357E-7 | 25.713823 | 10 |
| GCGGTTC | 70 | 9.2946357E-7 | 25.713823 | 8 |
| AATGCCG | 70 | 9.2946357E-7 | 25.713823 | 21 |
| TCGTATA | 70 | 9.2946357E-7 | 25.713823 | 9 |
| ATGCCGA | 70 | 9.2946357E-7 | 25.713823 | 22 |
| TGCCGAG | 70 | 9.2946357E-7 | 25.713823 | 23 |