Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379309.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 462389 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATCTCGT | 35 | 6.238335E-6 | 38.573097 | 40 |
| TCTCGTA | 35 | 6.238335E-6 | 38.573097 | 41 |
| ACCGGGT | 30 | 1.1385766E-4 | 37.50162 | 30 |
| CGTATGC | 30 | 1.1385766E-4 | 37.50162 | 44 |
| TCGTATG | 30 | 1.1385766E-4 | 37.50162 | 43 |
| TACGTGC | 25 | 0.0021064796 | 35.99766 | 6 |
| GACCGGG | 35 | 2.817071E-4 | 32.14425 | 29 |
| AGACCGG | 35 | 2.817071E-4 | 32.14425 | 28 |
| CCGAGAC | 35 | 2.817071E-4 | 32.14425 | 25 |
| GCGGTTC | 35 | 2.8188594E-4 | 32.14077 | 8 |
| CGGTTCA | 35 | 2.8188594E-4 | 32.14077 | 9 |
| AGAGCGG | 35 | 2.8188594E-4 | 32.14077 | 5 |
| TGCCGAG | 35 | 2.8188594E-4 | 32.14077 | 23 |
| CTCGTAT | 45 | 3.4853485E-5 | 30.001299 | 42 |
| GAGACCG | 40 | 6.158965E-4 | 28.126219 | 27 |
| AAGAGCG | 40 | 6.1628624E-4 | 28.123175 | 4 |
| GAGCGGT | 45 | 0.0012259093 | 24.998377 | 6 |
| AGCGGTT | 50 | 0.0022634317 | 22.498539 | 7 |
| AACGGGT | 50 | 0.0022634317 | 22.498539 | 12 |
| AATGCCG | 50 | 0.0022634317 | 22.498539 | 21 |