Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390768.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1081749 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTACGAC | 30 | 0.005154836 | 29.990818 | 32 |
| GACCGGT | 40 | 6.176958E-4 | 28.11639 | 29 |
| CGTTGGA | 160 | 0.0 | 23.952076 | 5 |
| GATCGGA | 70 | 2.7092025E-5 | 22.493113 | 18 |
| ATCGGAA | 70 | 2.7092025E-5 | 22.493113 | 19 |
| ACCGGTG | 50 | 0.0022685567 | 22.49311 | 30 |
| TCTCGTA | 50 | 0.0022685567 | 22.49311 | 41 |
| TTCGTTG | 150 | 1.4551915E-11 | 21.038305 | 3 |
| TCGGAAG | 75 | 4.6131783E-5 | 20.993572 | 20 |
| CGTATGC | 55 | 0.0039433753 | 20.448286 | 44 |
| CTCGTAT | 55 | 0.0039433753 | 20.448286 | 42 |
| AGACCGG | 55 | 0.0039433753 | 20.448286 | 28 |
| TCGTTGG | 155 | 2.3646862E-11 | 20.358707 | 4 |
| TCGTATG | 60 | 0.0065217693 | 18.74426 | 43 |
| ACGGGAT | 125 | 3.8450344E-7 | 17.99449 | 13 |
| GGAAACG | 205 | 3.6379788E-12 | 17.558846 | 9 |
| CGGGATT | 130 | 5.800375E-7 | 17.302393 | 14 |
| AGCGGTT | 105 | 3.1203363E-5 | 17.13761 | 27 |
| AGATCGG | 95 | 2.8257526E-4 | 16.573872 | 17 |
| GCGGTTC | 115 | 6.7996705E-5 | 15.647383 | 28 |