Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378679.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1208825 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGTA | 50 | 4.8839865E-8 | 35.996124 | 29 |
| GAGCGGT | 60 | 2.459057E-4 | 22.511547 | 6 |
| AGACCGT | 90 | 8.259503E-6 | 19.99785 | 28 |
| ACCGTAT | 80 | 7.5696655E-5 | 19.685383 | 30 |
| CATCTCG | 95 | 1.3166749E-5 | 18.946114 | 39 |
| CGTATGC | 85 | 1.20511744E-4 | 18.528187 | 44 |
| TCTCGTA | 85 | 1.20511744E-4 | 18.528187 | 41 |
| CGTATTG | 85 | 1.20549965E-4 | 18.52742 | 32 |
| AGCGGTT | 75 | 0.0011110698 | 17.998066 | 7 |
| CTCGTAT | 90 | 1.8667223E-4 | 17.498842 | 42 |
| GCTCCGC | 80 | 0.001711672 | 16.873884 | 36 |
| GCGGTTC | 85 | 0.0025671087 | 15.880645 | 8 |
| GAGACCG | 115 | 6.7892E-5 | 15.65049 | 27 |
| CGCCCGG | 160 | 2.9669536E-7 | 15.467086 | 13 |
| AGAGCGG | 105 | 6.0137163E-4 | 15.007699 | 5 |
| TCGTATG | 105 | 6.040211E-4 | 14.999007 | 43 |
| GCGCCCG | 125 | 1.3818081E-4 | 14.398452 | 12 |
| CCGTATT | 110 | 8.5957895E-4 | 14.316643 | 31 |
| CGCCTGG | 205 | 3.3676042E-7 | 13.169316 | 13 |
| AATGCCG | 120 | 0.0016578361 | 13.123589 | 21 |