Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378673.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1188278 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGATA | 110 | 0.0 | 38.860985 | 30 |
| CGATATC | 110 | 0.0 | 38.860985 | 32 |
| GACCGAT | 115 | 0.0 | 37.171375 | 29 |
| CTCGTAT | 120 | 0.0 | 35.622566 | 42 |
| CCGATAT | 120 | 0.0 | 35.622566 | 31 |
| TCTCGTA | 125 | 0.0 | 34.197666 | 41 |
| TCGTATG | 125 | 0.0 | 34.197666 | 43 |
| CATCTCG | 135 | 0.0 | 33.33106 | 39 |
| AGAGCGG | 130 | 0.0 | 32.8976 | 5 |
| CGTATGC | 135 | 0.0 | 31.664505 | 44 |
| ATGCCGA | 145 | 0.0 | 31.032364 | 22 |
| GAGCGGT | 140 | 0.0 | 30.54777 | 6 |
| AATGCCG | 150 | 0.0 | 29.997953 | 21 |
| AAGAGCG | 155 | 0.0 | 29.043718 | 4 |
| GCGGTTC | 150 | 0.0 | 28.498055 | 8 |
| AGCGGTT | 150 | 0.0 | 28.498055 | 7 |
| ATCTCGT | 160 | 0.0 | 26.716927 | 40 |
| CGGTTCA | 165 | 0.0 | 25.907324 | 9 |
| GAGACCG | 165 | 0.0 | 25.907324 | 27 |
| AGACCGA | 170 | 0.0 | 25.145342 | 28 |