Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390694.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 904262 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 35 | 2.8246667E-4 | 32.133614 | 44 |
| TTGATCG | 30 | 0.005153926 | 29.991375 | 38 |
| AGATCGG | 125 | 0.0 | 26.995222 | 17 |
| GATCGGA | 125 | 0.0 | 26.995222 | 18 |
| CCGAGAC | 135 | 0.0 | 24.992813 | 45 |
| CCGCTTA | 45 | 0.00122841 | 24.992811 | 31 |
| TCGTATG | 45 | 0.00122841 | 24.992811 | 43 |
| ATCGGAA | 145 | 0.0 | 23.271742 | 19 |
| ATCTCGT | 50 | 0.0022680257 | 22.49353 | 40 |
| AGACCGC | 50 | 0.0022680257 | 22.49353 | 28 |
| CGCTTAG | 60 | 2.4717502E-4 | 22.49353 | 32 |
| CCGCATC | 55 | 0.003902224 | 20.48491 | 1 |
| CCTTCGT | 125 | 1.7362254E-8 | 19.829393 | 1 |
| GCGGTTC | 175 | 7.2759576E-12 | 19.280169 | 28 |
| AGCGGTT | 175 | 7.2759576E-12 | 19.280169 | 27 |
| CGGCTAA | 130 | 2.7759597E-8 | 19.035091 | 17 |
| GACCGCT | 60 | 0.0065202625 | 18.74461 | 29 |
| GAGACCG | 60 | 0.0065202625 | 18.74461 | 27 |
| TATCTCG | 60 | 0.0065202625 | 18.74461 | 39 |
| TCGGAAG | 185 | 1.6370905E-11 | 18.237999 | 20 |