Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390728.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 568115 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGCGCC | 35 | 2.8199845E-4 | 32.140152 | 10 |
| CGTATGC | 50 | 1.984672E-6 | 31.489035 | 44 |
| TCTCGTA | 50 | 1.984672E-6 | 31.489035 | 41 |
| ACCGCGC | 30 | 0.005147209 | 29.997477 | 9 |
| GATCGGA | 85 | 2.0372681E-10 | 29.107512 | 18 |
| CTCGTAT | 55 | 4.1713556E-6 | 28.626394 | 42 |
| GCGCCCG | 55 | 4.1713556E-6 | 28.626394 | 12 |
| TCGTATG | 55 | 4.1713556E-6 | 28.626394 | 43 |
| GACCGGC | 60 | 8.198564E-6 | 26.243172 | 29 |
| AGACCGG | 60 | 8.198564E-6 | 26.243172 | 28 |
| CCTTCGT | 90 | 1.1650627E-8 | 25.046406 | 1 |
| CGGCACA | 65 | 1.5250584E-5 | 24.224466 | 32 |
| ATCGGAA | 105 | 2.3701432E-9 | 23.563223 | 19 |
| CGCTCCA | 50 | 0.0022643164 | 22.498108 | 9 |
| ATCTCGT | 75 | 4.6097237E-5 | 20.99269 | 40 |
| TCGGAAG | 125 | 1.7696948E-8 | 19.793106 | 20 |
| CGTGAGC | 80 | 7.447457E-5 | 19.724045 | 1 |
| GAGACCG | 80 | 7.5695265E-5 | 19.682377 | 27 |
| GTATGCC | 80 | 7.57465E-5 | 19.680645 | 45 |
| CGCCCGG | 70 | 6.9938897E-4 | 19.279001 | 13 |