Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390772.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 666992 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGAT | 35 | 6.2553554E-6 | 38.56153 | 29 |
| CTCGTAT | 40 | 1.5623305E-5 | 33.74134 | 42 |
| TAGCGAT | 40 | 1.5623305E-5 | 33.74134 | 35 |
| TCGCCTG | 30 | 0.00510514 | 30.048618 | 5 |
| CTCGAGC | 30 | 0.00510514 | 30.048618 | 6 |
| ACCGATA | 45 | 3.4947858E-5 | 29.992304 | 30 |
| GATAGCG | 45 | 3.4947858E-5 | 29.992304 | 33 |
| CGTATGC | 50 | 7.166476E-5 | 26.993073 | 44 |
| CCGATAG | 50 | 7.166476E-5 | 26.993073 | 31 |
| ATAGCGA | 50 | 7.166476E-5 | 26.993073 | 34 |
| TCTCGTA | 50 | 7.166476E-5 | 26.993073 | 41 |
| AGACCGA | 50 | 7.166476E-5 | 26.993073 | 28 |
| CGATAGC | 60 | 2.4702892E-4 | 22.494226 | 32 |
| GATCGTG | 55 | 0.0039014856 | 20.48462 | 4 |
| CTACTCG | 80 | 7.57184E-5 | 19.682447 | 32 |
| ATCTCGT | 70 | 6.9913256E-4 | 19.280766 | 40 |
| CCGAGAC | 70 | 6.9913256E-4 | 19.280766 | 25 |
| TCGTATG | 70 | 6.9913256E-4 | 19.280766 | 43 |
| CGGAAGA | 75 | 0.0010981183 | 18.027819 | 1 |
| GAGACCG | 75 | 0.0011114711 | 17.995382 | 27 |