Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390596.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 216160 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTTCGTT | 50 | 0.0022541233 | 22.507868 | 2 |
| ACTAGAC | 90 | 3.264995E-7 | 22.497456 | 19 |
| CCTAGCT | 55 | 0.0039289366 | 20.452232 | 15 |
| GAAACTT | 110 | 4.6140332E-5 | 16.361786 | 39 |
| TATCTTC | 140 | 1.2386754E-6 | 16.07705 | 4 |
| TAGACAG | 155 | 2.0460175E-7 | 15.965936 | 21 |
| CTAGACA | 165 | 4.1594467E-7 | 14.998304 | 20 |
| AAACTAG | 125 | 0.002243205 | 12.598577 | 17 |
| AAATATC | 235 | 1.2578312E-7 | 12.465587 | 1 |
| ATATCTT | 200 | 3.6092897E-6 | 12.379327 | 3 |
| AACTAGA | 150 | 6.4178195E-4 | 11.998643 | 18 |
| GACAGAA | 230 | 1.3395911E-6 | 11.737803 | 23 |
| CTGAGGC | 195 | 3.7516707E-5 | 11.555868 | 1 |
| GCTGGTC | 140 | 0.005237137 | 11.248728 | 22 |
| AGACAGA | 245 | 2.8641662E-6 | 11.019162 | 22 |
| GGCTGGT | 165 | 0.0014258849 | 10.907858 | 21 |
| GAACTCC | 145 | 0.006800045 | 10.86084 | 31 |
| TCACTTG | 145 | 0.006800045 | 10.86084 | 15 |
| AATATCT | 200 | 6.141361E-4 | 10.12854 | 2 |
| ACAGAAG | 230 | 2.0354084E-4 | 9.781503 | 24 |