Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378670.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1053713 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGGTTA | 45 | 3.4930854E-5 | 29.996836 | 31 |
| GCGGTTC | 60 | 8.197412E-6 | 26.247232 | 8 |
| ACCGGTT | 60 | 2.4690817E-4 | 22.497627 | 30 |
| CGTATGC | 60 | 2.4690817E-4 | 22.497627 | 44 |
| AATGCCG | 60 | 2.4690817E-4 | 22.497627 | 21 |
| CTCGTAT | 75 | 4.604223E-5 | 20.998783 | 42 |
| CGGTTCA | 75 | 4.6059067E-5 | 20.997786 | 9 |
| CGGTTAC | 65 | 4.2409255E-4 | 20.76704 | 32 |
| GACCGGT | 65 | 4.2409255E-4 | 20.76704 | 29 |
| GAGCGGT | 70 | 6.958939E-4 | 19.295584 | 6 |
| TCTCGTA | 75 | 0.001110572 | 17.998957 | 41 |
| TATCTCG | 80 | 0.0017113821 | 16.874022 | 39 |
| ACCGCGC | 85 | 0.00256678 | 15.880679 | 9 |
| AGACCGG | 85 | 0.00256678 | 15.880679 | 28 |
| CCGAGAC | 85 | 0.00256678 | 15.880679 | 25 |
| TCGTATG | 100 | 4.1699744E-4 | 15.748339 | 43 |
| ATCTCGT | 90 | 0.0037550943 | 14.999129 | 40 |
| CGGAAGA | 110 | 8.5266854E-4 | 14.331634 | 1 |
| AGAGCGG | 95 | 0.005357406 | 14.217799 | 5 |
| GAGACCG | 95 | 0.0053793816 | 14.209028 | 27 |