Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390778.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1097176 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TGTACGC | 25 | 0.0021082296 | 35.995953 | 19 |
| TATCTCG | 80 | 1.0004442E-10 | 30.928381 | 39 |
| CGATAGT | 40 | 6.176604E-4 | 28.11671 | 26 |
| TCGTATG | 85 | 6.504706E-9 | 26.461582 | 43 |
| CGAGACG | 90 | 1.19343895E-8 | 24.994911 | 32 |
| CTCGTAT | 100 | 1.3496901E-9 | 24.74158 | 42 |
| GAGACGT | 95 | 2.1198503E-8 | 23.67939 | 33 |
| CGTATGC | 95 | 2.1229425E-8 | 23.676151 | 44 |
| CGGTGTT | 50 | 0.002245692 | 22.532393 | 3 |
| ATCTCGT | 105 | 6.126356E-8 | 21.422256 | 40 |
| GACGTAT | 105 | 6.126356E-8 | 21.422256 | 35 |
| AGACGTA | 110 | 1.0014264E-7 | 20.448517 | 34 |
| GCGATAG | 55 | 0.0039431513 | 20.448517 | 25 |
| ACGTATC | 110 | 1.0014264E-7 | 20.448517 | 36 |
| TCTCGTA | 110 | 1.00189936E-7 | 20.447586 | 41 |
| GAGACCG | 130 | 2.7768692E-8 | 19.035452 | 27 |
| CCCGGCA | 60 | 0.006514539 | 18.74789 | 15 |
| GACCGAG | 120 | 2.501747E-7 | 18.746181 | 29 |
| CTTGCGA | 60 | 0.0065213996 | 18.744473 | 22 |
| AGACCGA | 125 | 3.8391954E-7 | 17.997154 | 28 |