Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390745.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 406259 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CAGGCGG | 30 | 0.005149099 | 29.99319 | 18 |
| AGATCGG | 85 | 2.0372681E-10 | 29.111036 | 17 |
| CGTATGC | 65 | 4.875237E-7 | 27.682613 | 44 |
| CTCGTAT | 65 | 4.875237E-7 | 27.682613 | 42 |
| GATCGGA | 90 | 3.947207E-10 | 27.493755 | 18 |
| ATCGGAA | 90 | 3.947207E-10 | 27.493755 | 19 |
| TCGGAAG | 95 | 7.403287E-10 | 26.046717 | 20 |
| GACCGTG | 70 | 9.311116E-7 | 25.705282 | 29 |
| TATCTCG | 70 | 9.311116E-7 | 25.705282 | 39 |
| GAGACCG | 75 | 1.6964932E-6 | 23.99455 | 27 |
| TCTCGTA | 75 | 1.6983122E-6 | 23.991598 | 41 |
| ATCTCGT | 85 | 1.893768E-7 | 23.81519 | 40 |
| AGACCGT | 80 | 2.9759394E-6 | 22.492123 | 28 |
| TCGTATG | 80 | 2.9759394E-6 | 22.492123 | 43 |
| ACCGTGA | 80 | 2.9759394E-6 | 22.492123 | 30 |
| GAGATCG | 115 | 6.7630026E-9 | 21.514206 | 16 |
| CGAGATC | 130 | 1.2259989E-9 | 20.761961 | 15 |
| CCGAGAT | 120 | 1.1043085E-8 | 20.61778 | 14 |
| CCGTGAT | 95 | 1.3163819E-5 | 18.940735 | 31 |
| CGGAAGA | 135 | 4.2629836E-8 | 18.329172 | 21 |