Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379235.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 860082 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGTAAC | 30 | 0.0051472955 | 29.999107 | 13 |
| GCGTGAT | 55 | 0.0039364216 | 20.453938 | 14 |
| CAAACGG | 60 | 0.0065103127 | 18.749441 | 21 |
| TCGTTGG | 175 | 1.382432E-10 | 18.003653 | 4 |
| TTCGTTG | 200 | 5.0931703E-11 | 16.878424 | 3 |
| CTTCGTT | 140 | 1.2511464E-6 | 16.07469 | 2 |
| CGTTGGA | 200 | 9.240466E-10 | 15.752279 | 5 |
| AACGGGA | 190 | 7.9890015E-9 | 15.3942795 | 12 |
| AAACGGG | 220 | 2.1645974E-10 | 15.340454 | 11 |
| CCCGCCA | 90 | 0.003747837 | 15.003042 | 3 |
| GAAACGG | 195 | 1.1257725E-8 | 14.999555 | 10 |
| CGGCTAA | 165 | 4.1976273E-7 | 14.999554 | 17 |
| CGGGATT | 185 | 9.605537E-8 | 14.594161 | 14 |
| CCTTCGT | 155 | 3.602645E-6 | 14.520762 | 1 |
| CCGGCTA | 155 | 3.615707E-6 | 14.5156975 | 16 |
| CGGAAGC | 125 | 1.3801613E-4 | 14.399571 | 25 |
| ACGGGAT | 190 | 1.3309545E-7 | 14.210104 | 13 |
| TCCCGGG | 100 | 0.0075475676 | 13.500383 | 44 |
| CCCGGGT | 100 | 0.0075475676 | 13.500383 | 45 |
| CCCGGCT | 180 | 1.6926002E-5 | 12.499628 | 15 |