Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379251.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 508901 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGGAGG | 30 | 0.0051454734 | 29.998953 | 20 |
| CGTATGC | 45 | 0.0012251628 | 25.001585 | 44 |
| CGTGAAG | 45 | 0.0012258649 | 24.999128 | 36 |
| CGGTTCA | 50 | 0.0022633483 | 22.499214 | 9 |
| CCGGGCG | 55 | 0.0039276527 | 20.459862 | 1 |
| TCGTATG | 55 | 0.0039321273 | 20.455841 | 43 |
| ACTAGAC | 130 | 2.7643182E-8 | 19.037796 | 19 |
| ATCTCGT | 75 | 0.0011093277 | 17.999372 | 40 |
| CCTTCGT | 85 | 0.002558091 | 15.886481 | 1 |
| CTTCGTT | 105 | 6.021279E-4 | 15.002424 | 2 |
| GCCGAGA | 105 | 6.030267E-4 | 14.999476 | 24 |
| TCGTTGG | 110 | 8.566275E-4 | 14.320496 | 4 |
| GAAACGG | 140 | 3.601371E-4 | 12.856693 | 10 |
| GCTAGAC | 125 | 0.0022491259 | 12.59956 | 33 |
| TTCGTTG | 130 | 0.0030138702 | 12.117343 | 3 |
| ATTGGCC | 150 | 6.439981E-4 | 11.999581 | 8 |
| CGTTGGA | 140 | 0.0052429945 | 11.251817 | 5 |
| CTAGACA | 260 | 4.817157E-7 | 11.249607 | 20 |
| GAAGCAT | 280 | 1.251934E-6 | 10.446063 | 27 |
| AACTAGA | 240 | 2.766625E-5 | 10.3121395 | 18 |