Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390635.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1385010 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATTAGCG | 35 | 2.8241417E-4 | 32.136127 | 39 |
| TTAGCGA | 40 | 6.1782583E-4 | 28.116066 | 40 |
| CCGCAAT | 115 | 9.094947E-12 | 25.4267 | 31 |
| GACCGGG | 45 | 0.0012150537 | 25.040876 | 5 |
| ACGACAC | 55 | 1.3700107E-4 | 24.5412 | 36 |
| CGCAATG | 125 | 2.910383E-11 | 23.39341 | 32 |
| AGACCGC | 130 | 5.0931703E-11 | 22.495289 | 28 |
| TCTCGTA | 140 | 5.456968E-12 | 22.492851 | 41 |
| CGTATGC | 130 | 5.0931703E-11 | 22.49204 | 44 |
| CTCGTAT | 135 | 8.367351E-11 | 21.659 | 42 |
| AGATCGG | 120 | 1.1097654E-8 | 20.618448 | 17 |
| GTACTCG | 55 | 0.0039450144 | 20.44731 | 44 |
| TCGTATG | 145 | 2.2009772E-10 | 20.165277 | 43 |
| GACCGCA | 170 | 3.6379788E-12 | 19.848783 | 29 |
| GATCGGA | 125 | 1.774606E-8 | 19.79371 | 18 |
| ATCTCGT | 160 | 3.8198777E-11 | 19.681246 | 40 |
| GAGACCG | 150 | 3.45608E-10 | 19.495914 | 27 |
| CACCGCG | 70 | 6.9977075E-4 | 19.280283 | 8 |
| ACTCTCG | 60 | 0.0065217507 | 18.74472 | 22 |
| TGCGCCT | 60 | 0.0065217507 | 18.74472 | 16 |