Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379045.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1697502 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGATA | 75 | 4.7293724E-11 | 32.9992 | 30 |
| CCGATAA | 80 | 1.0004442E-10 | 30.93584 | 31 |
| CTCGTAT | 100 | 4.5474735E-11 | 26.998552 | 42 |
| GACCGAT | 95 | 7.421477E-10 | 26.052 | 29 |
| CGTATGC | 125 | 7.530616E-10 | 21.59884 | 44 |
| CGGTTCA | 115 | 6.7793735E-9 | 21.520584 | 9 |
| TCTCGTA | 115 | 6.7793735E-9 | 21.520584 | 41 |
| AAGAGCG | 130 | 1.2259989E-9 | 20.773623 | 4 |
| TCGTATG | 120 | 1.10685505E-8 | 20.623892 | 43 |
| CGATAAT | 120 | 1.10685505E-8 | 20.623892 | 32 |
| GAGCGGT | 145 | 2.1827873E-10 | 20.176086 | 6 |
| TATCTCG | 135 | 1.9681465E-9 | 19.998926 | 39 |
| GCGGTTC | 125 | 1.769331E-8 | 19.799519 | 8 |
| AGACCGA | 130 | 2.775414E-8 | 19.038 | 28 |
| TGCCGAG | 130 | 2.7763235E-8 | 19.03744 | 23 |
| CCGAGAC | 135 | 4.2769898E-8 | 18.332888 | 25 |
| CGGAAGA | 125 | 3.820296E-7 | 18.006989 | 1 |
| ATGCCGA | 140 | 6.485425E-8 | 17.677622 | 22 |
| CCTTCGT | 230 | 0.0 | 17.615534 | 1 |
| AGAGCGG | 155 | 1.0881195E-8 | 17.423038 | 5 |