Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378748.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 733435 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 40 | 3.4572986E-7 | 39.37303 | 41 |
| GACCGAG | 45 | 8.697625E-7 | 34.99825 | 29 |
| AGACCGA | 50 | 1.9810996E-6 | 31.498425 | 28 |
| TCGTATG | 50 | 1.9810996E-6 | 31.498425 | 43 |
| CGTTGGA | 50 | 7.147403E-5 | 27.004171 | 5 |
| CGTATGC | 60 | 8.189441E-6 | 26.248688 | 44 |
| CTCGTAT | 60 | 8.189441E-6 | 26.248688 | 42 |
| CCGAGAC | 60 | 8.189441E-6 | 26.248688 | 25 |
| AGAGCGG | 70 | 9.287305E-7 | 25.718262 | 5 |
| ACCGAGT | 70 | 9.3038943E-7 | 25.713 | 30 |
| CGCCCGG | 55 | 1.3680074E-4 | 24.544228 | 13 |
| GAGCGGT | 80 | 2.9683324E-6 | 22.503477 | 6 |
| CGAGTAG | 70 | 2.7023138E-5 | 22.498875 | 32 |
| GCGGTTC | 70 | 2.7023138E-5 | 22.498875 | 8 |
| GCGCCCG | 50 | 0.0022644924 | 22.498875 | 12 |
| AGCGGTT | 70 | 2.7023138E-5 | 22.498875 | 7 |
| GAGACCG | 70 | 2.7023138E-5 | 22.498875 | 27 |
| ATCTCGT | 75 | 4.601488E-5 | 20.99895 | 40 |
| ATGCCGA | 75 | 4.601488E-5 | 20.99895 | 22 |
| TGCCGAG | 75 | 4.601488E-5 | 20.99895 | 23 |