Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390639.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1278372 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CACCGCG | 40 | 6.175939E-4 | 28.117664 | 8 |
| CGTATGC | 70 | 9.330106E-7 | 25.707582 | 44 |
| AGATCGG | 130 | 1.8189894E-12 | 24.226345 | 17 |
| GATCGGA | 130 | 5.0931703E-11 | 22.495012 | 18 |
| AGACCGG | 80 | 2.9809198E-6 | 22.495012 | 28 |
| CCTCGGG | 65 | 4.2438152E-4 | 20.765438 | 15 |
| TCGTTCA | 55 | 0.0039418335 | 20.450012 | 18 |
| TCGGAAG | 145 | 2.2009772E-10 | 20.167152 | 20 |
| ATCGGAA | 145 | 2.2009772E-10 | 20.167152 | 19 |
| TCGTATG | 90 | 8.271056E-6 | 19.994785 | 43 |
| CTCGTAT | 95 | 1.3189821E-5 | 18.942429 | 42 |
| CCGGAAC | 110 | 2.2620134E-6 | 18.404291 | 31 |
| GACCGGA | 100 | 2.0508347E-5 | 17.99601 | 29 |
| ATCTCGT | 115 | 3.457868E-6 | 17.604105 | 40 |
| ACCGGAA | 115 | 3.457868E-6 | 17.604105 | 30 |
| CGCCCGC | 90 | 1.844037E-4 | 17.526972 | 1 |
| CCACCGC | 120 | 5.184942E-6 | 16.87126 | 7 |
| CGGAACT | 120 | 5.1868738E-6 | 16.8706 | 32 |
| GAGACCG | 110 | 4.6469813E-5 | 16.360008 | 27 |
| GCGGTTC | 180 | 3.921741E-9 | 16.246399 | 28 |