Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379222.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 504133 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGAAA | 20 | 7.030506E-4 | 44.998714 | 34 |
| CGACCGA | 20 | 7.030506E-4 | 44.998714 | 32 |
| CGTATGC | 35 | 2.8153398E-4 | 32.14831 | 44 |
| CTCGTAT | 35 | 2.8169792E-4 | 32.145126 | 42 |
| TCTCGTA | 30 | 0.005142775 | 30.002117 | 41 |
| ATCTCGT | 30 | 0.00514527 | 29.99914 | 40 |
| GACCGAC | 30 | 0.00514527 | 29.99914 | 29 |
| GACCGAA | 30 | 0.00514527 | 29.99914 | 33 |
| CCGACCG | 30 | 0.00514527 | 29.99914 | 31 |
| CCGAAAT | 30 | 0.00514527 | 29.99914 | 35 |
| TCGTATG | 50 | 0.0022619322 | 22.501587 | 43 |
| CGTTGGA | 85 | 0.0025612805 | 15.883472 | 5 |
| CGCCCGG | 85 | 0.0025629764 | 15.881898 | 13 |
| CGGCTAA | 115 | 0.0012003989 | 13.69526 | 17 |
| CCGGCTA | 125 | 0.002248969 | 12.599639 | 16 |
| TATCTTC | 435 | 0.0 | 11.89739 | 4 |
| GCCCGGC | 160 | 0.0011062766 | 11.249679 | 14 |
| CCCGGCT | 140 | 0.005250315 | 11.249678 | 15 |
| ATATCTT | 470 | 0.0 | 11.0114155 | 3 |
| GAAACTT | 370 | 3.5470293E-10 | 10.945632 | 39 |