Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379312.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 351150 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 25 | 3.8832193E-5 | 45.00399 | 42 |
| TCTCGTA | 25 | 3.8832193E-5 | 45.00399 | 41 |
| CGCAAGT | 25 | 3.8864873E-5 | 44.99758 | 32 |
| TCGTATG | 30 | 1.1377141E-4 | 37.503323 | 43 |
| GCGGTTC | 30 | 1.13866845E-4 | 37.497982 | 8 |
| AGACCGC | 30 | 1.13866845E-4 | 37.497982 | 28 |
| ATCTCGT | 35 | 2.81495E-4 | 32.145706 | 40 |
| ACCGCAA | 35 | 2.8173038E-4 | 32.14113 | 30 |
| GACCGCA | 35 | 2.8173038E-4 | 32.14113 | 29 |
| ATGCCGA | 35 | 2.8173038E-4 | 32.14113 | 22 |
| ACTGCGC | 30 | 0.005143801 | 29.998386 | 9 |
| CGTATGC | 40 | 6.1543577E-4 | 28.127491 | 44 |
| AAGAGCG | 40 | 6.1543577E-4 | 28.127491 | 4 |
| AGCGGTT | 40 | 6.159487E-4 | 28.123486 | 7 |
| GAGACCG | 40 | 6.159487E-4 | 28.123486 | 27 |
| CCGAGAC | 40 | 6.159487E-4 | 28.123486 | 25 |
| CGCCACC | 70 | 9.281066E-7 | 25.712902 | 5 |
| CGGTTCA | 45 | 0.0012252425 | 24.998657 | 9 |
| AATGCCG | 50 | 0.0022622088 | 22.49879 | 21 |
| CCGCAAG | 50 | 0.0022622088 | 22.49879 | 31 |