Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390740.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 825713 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGAAGC | 30 | 0.0051550027 | 29.98979 | 25 |
| ATCGGAA | 100 | 4.5474735E-11 | 26.994078 | 19 |
| CCGTCGT | 50 | 7.172601E-5 | 26.990808 | 31 |
| CGTCGTA | 50 | 7.172601E-5 | 26.990808 | 32 |
| GATCGGA | 105 | 8.54925E-11 | 25.708645 | 18 |
| ATGTTCG | 45 | 0.0012286985 | 24.991488 | 40 |
| AGACCGT | 55 | 1.3709116E-4 | 24.537098 | 28 |
| AGATCGG | 120 | 4.5292836E-10 | 22.495066 | 17 |
| GACCGTC | 60 | 2.472383E-4 | 22.492342 | 29 |
| TCGGAAG | 120 | 4.5292836E-10 | 22.492342 | 20 |
| CGAGATT | 50 | 0.0022685574 | 22.492342 | 44 |
| CGTATGC | 65 | 4.2465865E-4 | 20.76216 | 44 |
| CCGAGAC | 130 | 1.2314558E-9 | 20.76216 | 45 |
| GTCGTAT | 65 | 4.2465865E-4 | 20.76216 | 33 |
| ACCGTCG | 65 | 4.2465865E-4 | 20.76216 | 30 |
| GTCGTTT | 55 | 0.0038883754 | 20.497229 | 2 |
| TCTCGTA | 75 | 0.0011124022 | 17.993872 | 41 |
| CTCGTAT | 80 | 0.0017141951 | 16.869255 | 42 |
| GGATCGC | 80 | 0.0017141951 | 16.869255 | 43 |
| GAGACCG | 80 | 0.0017141951 | 16.869255 | 27 |