Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378661.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1776325 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 165 | 0.0 | 34.089096 | 42 |
| TCTCGTA | 160 | 0.0 | 33.748207 | 41 |
| CGCATTA | 170 | 0.0 | 31.76391 | 32 |
| CGTATGC | 180 | 0.0 | 31.248339 | 44 |
| TCGTATG | 205 | 0.0 | 29.632572 | 43 |
| AGACCGC | 205 | 0.0 | 26.340805 | 28 |
| GAGCGGT | 220 | 0.0 | 24.55175 | 6 |
| AGAGCGG | 225 | 0.0 | 24.006157 | 5 |
| ATCTCGT | 230 | 0.0 | 23.477674 | 40 |
| GCGGTTC | 230 | 0.0 | 23.47635 | 8 |
| AGCGGTT | 240 | 0.0 | 23.435595 | 7 |
| GACCGCA | 250 | 0.0 | 22.499437 | 29 |
| ACCGCAT | 240 | 0.0 | 22.499435 | 30 |
| CGGTTCA | 250 | 0.0 | 22.49817 | 9 |
| GAGACCG | 265 | 0.0 | 22.073675 | 27 |
| CCGCATT | 250 | 0.0 | 21.599459 | 31 |
| AAGAGCG | 260 | 0.0 | 20.774559 | 4 |
| CCGAGAC | 265 | 0.0 | 20.376274 | 25 |
| AATGCCG | 255 | 0.0 | 20.293037 | 21 |
| CATCTCG | 275 | 0.0 | 19.635872 | 39 |