Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378693.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1084684 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGAT | 125 | 0.0 | 37.797756 | 29 |
| CTCGTAT | 120 | 0.0 | 37.497772 | 42 |
| TCGTATG | 135 | 0.0 | 36.664486 | 43 |
| CGTATGC | 130 | 0.0 | 36.343994 | 44 |
| ACCGATT | 130 | 0.0 | 36.343994 | 30 |
| CGGTTCA | 135 | 0.0 | 34.996307 | 9 |
| CCGATTC | 140 | 0.0 | 33.747993 | 31 |
| TCTCGTA | 135 | 0.0 | 33.331352 | 41 |
| GAGCGGT | 145 | 0.0 | 32.600803 | 6 |
| AGCGGTT | 150 | 0.0 | 31.496675 | 7 |
| AGACCGA | 160 | 0.0 | 29.529497 | 28 |
| CCGAGAC | 160 | 0.0 | 29.529497 | 25 |
| GCGGTTC | 160 | 0.0 | 29.528135 | 8 |
| AATGCCG | 175 | 0.0 | 26.99715 | 21 |
| AGAGCGG | 180 | 0.0 | 26.261759 | 5 |
| TGCCGAG | 180 | 0.0 | 26.24723 | 23 |
| CGGAAGA | 185 | 0.0 | 24.343079 | 1 |
| CGATTCT | 215 | 0.0 | 24.068338 | 32 |
| ATCTCGT | 190 | 0.0 | 23.682802 | 40 |
| ATGCCGA | 200 | 0.0 | 23.622507 | 22 |