Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390665.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 981998 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAGAGCG | 30 | 0.0051504867 | 29.995724 | 7 |
| TGACGAA | 30 | 0.0051543354 | 29.99114 | 31 |
| GATCGGA | 60 | 8.205516E-6 | 26.243584 | 18 |
| ATCGGAA | 60 | 8.205516E-6 | 26.243584 | 19 |
| AGATCGG | 65 | 1.5263438E-5 | 24.224848 | 17 |
| TCGGAAG | 65 | 1.5269461E-5 | 24.223614 | 20 |
| GCGGTTC | 90 | 8.270323E-6 | 19.994093 | 28 |
| CGGAAGA | 90 | 1.8695454E-4 | 17.494831 | 21 |
| CCGAGAC | 105 | 3.1195745E-5 | 17.137794 | 45 |
| GAGCGGT | 110 | 4.6481502E-5 | 16.358803 | 26 |
| CTTCGTA | 85 | 0.0025672487 | 15.880089 | 7 |
| CTCGGGA | 190 | 1.3359386E-7 | 14.206329 | 35 |
| CTACTCG | 130 | 1.930509E-4 | 13.842065 | 32 |
| AGCGGTT | 135 | 2.6579664E-4 | 13.329394 | 27 |
| CGGTTCA | 120 | 0.0016597952 | 13.121123 | 29 |
| TCGTATA | 125 | 0.002253525 | 12.598203 | 9 |
| TGCCGAG | 155 | 8.511462E-4 | 11.609473 | 12 |
| ACCACGC | 180 | 2.346549E-4 | 11.248396 | 9 |
| TACTCGG | 160 | 0.0011103807 | 11.246677 | 33 |
| AGAGCGG | 140 | 0.005266802 | 11.246677 | 25 |