Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390669.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 869684 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGCCTA | 45 | 8.721854E-7 | 34.98708 | 31 |
| CGCCTAA | 50 | 1.986602E-6 | 31.488367 | 32 |
| CGTCTTG | 30 | 0.00515588 | 29.988922 | 32 |
| AGATCGG | 120 | 0.0 | 26.243322 | 17 |
| GATCGGA | 125 | 1.8189894E-12 | 25.193592 | 18 |
| ATCGGAA | 125 | 1.8189894E-12 | 25.193592 | 19 |
| TCGGAAG | 135 | 3.6379788E-12 | 23.324717 | 20 |
| GCGGTTC | 145 | 0.0 | 23.267265 | 28 |
| GACCGCC | 70 | 2.7097347E-5 | 22.491693 | 29 |
| AGACCGC | 70 | 2.7097347E-5 | 22.491693 | 28 |
| CGGTTCA | 155 | 1.8189894E-12 | 21.766153 | 29 |
| ACCGCCT | 75 | 4.61409E-5 | 20.992247 | 30 |
| TCGTATG | 75 | 4.61409E-5 | 20.992247 | 43 |
| AACGTCC | 55 | 0.0039389553 | 20.451696 | 8 |
| GAGCGGT | 165 | 3.6379788E-12 | 20.446993 | 26 |
| CGGAAGA | 155 | 2.3646862E-11 | 20.315077 | 21 |
| CGAGATC | 170 | 3.6379788E-12 | 19.847895 | 15 |
| CCGAGAC | 170 | 3.6379788E-12 | 19.845612 | 45 |
| CTCGTAT | 80 | 7.581786E-5 | 19.68023 | 42 |
| TCTCGTA | 80 | 7.581786E-5 | 19.68023 | 41 |