Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379322.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 417842 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGATC | 20 | 7.028863E-4 | 44.999043 | 30 |
| CTCGTAT | 25 | 0.0021057972 | 35.999233 | 42 |
| GAGACCG | 25 | 0.0021057972 | 35.999233 | 27 |
| AGAGCGG | 30 | 0.0051410776 | 30.002953 | 5 |
| CGTATGC | 30 | 0.0051440876 | 29.999361 | 44 |
| CCGATCA | 30 | 0.0051440876 | 29.999361 | 31 |
| GACCGAT | 30 | 0.0051440876 | 29.999361 | 29 |
| GAGCGGT | 30 | 0.0051440876 | 29.999361 | 6 |
| AGACCGA | 30 | 0.0051440876 | 29.999361 | 28 |
| CGATCAA | 30 | 0.0051440876 | 29.999361 | 32 |
| CCTTCGT | 70 | 2.6881551E-5 | 22.510298 | 1 |
| CGGGATT | 50 | 0.0022624962 | 22.49952 | 14 |
| ACGGGAT | 55 | 0.0039328947 | 20.454111 | 13 |
| ACCTCCG | 55 | 0.0039328947 | 20.454111 | 35 |
| CTTCGTT | 95 | 2.8118593E-4 | 16.580578 | 2 |
| TCGTTGG | 95 | 2.8118593E-4 | 16.580578 | 4 |
| CGTTGGA | 100 | 4.1560165E-4 | 15.75155 | 5 |
| GTTCAGC | 90 | 0.003749128 | 14.9996805 | 11 |
| GTCACAA | 105 | 6.0264417E-4 | 14.99968 | 39 |
| TTCGTTG | 125 | 0.0022457098 | 12.601239 | 3 |