Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379311.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 457148 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 30 | 1.1389117E-4 | 37.499634 | 44 |
| TATCTCG | 25 | 0.0021058843 | 35.99965 | 39 |
| AGAGCGG | 25 | 0.0021058843 | 35.99965 | 5 |
| CGGTTCA | 30 | 0.005144298 | 29.999706 | 9 |
| GACCGCT | 30 | 0.005144298 | 29.999706 | 29 |
| AGACCGC | 30 | 0.005144298 | 29.999706 | 28 |
| CCTCCGC | 55 | 0.0039331894 | 20.454346 | 36 |
| TCGTATG | 55 | 0.0039331894 | 20.454346 | 43 |
| TCGTTGG | 95 | 1.3131115E-5 | 18.947184 | 4 |
| TTCGTTG | 100 | 2.0424268E-5 | 17.999825 | 3 |
| CGTTGGA | 110 | 4.6280824E-5 | 16.363476 | 5 |
| AACGGGA | 100 | 4.160505E-4 | 15.749846 | 12 |
| TCGCTTG | 100 | 4.160505E-4 | 15.749846 | 15 |
| AATCGCT | 100 | 4.160505E-4 | 15.749846 | 13 |
| GAAACGG | 105 | 6.027449E-4 | 14.999854 | 10 |
| CGCTTGA | 105 | 6.027449E-4 | 14.999854 | 16 |
| AGAATCG | 120 | 9.732529E-5 | 14.999853 | 11 |
| GGTTGCA | 200 | 1.5650585E-8 | 14.624858 | 37 |
| AAACGGG | 125 | 1.377689E-4 | 14.39986 | 11 |
| GAATCGC | 110 | 8.5750414E-4 | 14.318042 | 12 |