Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379048.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1013713 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGTA | 55 | 4.164831E-6 | 28.635895 | 29 |
| CCGTATA | 55 | 4.164831E-6 | 28.635895 | 31 |
| CTCGTAT | 60 | 8.191346E-6 | 26.249567 | 42 |
| TCCCGGA | 45 | 0.0012265722 | 24.99959 | 44 |
| GCGGTTC | 65 | 1.5237149E-5 | 24.230371 | 8 |
| CGGTTCA | 65 | 1.5237149E-5 | 24.230371 | 9 |
| AGCGGTT | 80 | 2.9746043E-6 | 22.49963 | 7 |
| GAGACCG | 70 | 2.7029295E-5 | 22.49963 | 27 |
| TCTCGTA | 70 | 2.7029295E-5 | 22.49963 | 41 |
| CCGAGAC | 70 | 2.7029295E-5 | 22.49963 | 25 |
| ACCGTAT | 70 | 2.7029295E-5 | 22.49963 | 30 |
| CGTATGC | 75 | 4.602526E-5 | 20.999657 | 44 |
| AGACCGT | 75 | 4.602526E-5 | 20.999657 | 28 |
| AATCGCA | 55 | 0.003936596 | 20.45421 | 17 |
| CCCGCCA | 80 | 7.5513686E-5 | 19.691061 | 3 |
| GAGCGGT | 80 | 7.559964E-5 | 19.688147 | 6 |
| AGAGCGG | 80 | 7.559964E-5 | 19.688147 | 5 |
| TCGTATG | 80 | 7.5628304E-5 | 19.687176 | 43 |
| TATCTCG | 85 | 1.2044148E-4 | 18.529108 | 39 |
| CTTCGTA | 120 | 5.1726965E-6 | 16.874722 | 7 |