Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379078.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 802411 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTTGAT | 25 | 0.0021074177 | 35.99761 | 36 |
| GGACGAC | 25 | 0.0021074177 | 35.99761 | 28 |
| AACGGTT | 30 | 0.0051480173 | 29.998003 | 21 |
| GCGTTCT | 40 | 6.166906E-4 | 28.12313 | 40 |
| TCTCGTA | 40 | 6.166906E-4 | 28.12313 | 41 |
| GACCGAT | 50 | 7.15899E-5 | 26.998205 | 29 |
| CGTATGC | 45 | 0.0012267074 | 24.998339 | 44 |
| TATCTCG | 45 | 0.0012267074 | 24.998339 | 39 |
| CCGATTC | 50 | 0.0022648934 | 22.498505 | 31 |
| AGACCGA | 65 | 4.238595E-4 | 20.76785 | 28 |
| CTCGTAT | 55 | 0.0039370335 | 20.453186 | 42 |
| GCGGTTC | 55 | 0.0039370335 | 20.453186 | 8 |
| GAACGGT | 55 | 0.0039370335 | 20.453186 | 20 |
| TCGTATG | 55 | 0.0039370335 | 20.453186 | 43 |
| ATCTCGT | 75 | 0.0011103213 | 17.998804 | 40 |
| CCGGCTA | 80 | 0.0017109985 | 16.873878 | 16 |
| CGGAGGT | 80 | 0.0017109985 | 16.873878 | 27 |
| ATCTTCG | 110 | 4.62252E-5 | 16.368668 | 5 |
| CTTCGTA | 110 | 4.637348E-5 | 16.362549 | 7 |
| CGGCTAA | 85 | 0.002565397 | 15.881298 | 17 |