Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378694.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 833455 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 100 | 0.0 | 33.747482 | 42 |
| TCGTATG | 110 | 0.0 | 30.679527 | 43 |
| GCGGTTC | 140 | 0.0 | 30.533434 | 8 |
| GAGCGGT | 135 | 0.0 | 30.010365 | 6 |
| ACCCGTG | 30 | 0.0051483344 | 29.997763 | 12 |
| ACCGGTT | 105 | 0.0 | 29.99776 | 30 |
| CCGGTTC | 105 | 0.0 | 29.99776 | 31 |
| CGGTTCA | 140 | 0.0 | 28.926413 | 9 |
| CGGTTCT | 110 | 0.0 | 28.634226 | 32 |
| AGCGGTT | 145 | 0.0 | 27.92895 | 7 |
| GACCGGT | 115 | 0.0 | 27.389261 | 29 |
| TCTCGTA | 115 | 0.0 | 27.389261 | 41 |
| AGAGCGG | 150 | 0.0 | 27.009327 | 5 |
| GTATGCC | 120 | 0.0 | 26.248041 | 45 |
| AGACCGG | 120 | 0.0 | 26.248041 | 28 |
| AATGCCG | 140 | 0.0 | 25.712366 | 21 |
| AAGAGCG | 165 | 0.0 | 24.553932 | 4 |
| CGTATGC | 130 | 1.8189894E-12 | 24.228962 | 44 |
| CGGAAGA | 160 | 0.0 | 23.925995 | 1 |
| ATGCCGA | 155 | 0.0 | 23.224072 | 22 |