Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379324.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 524106 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGCCCG | 25 | 0.0021061744 | 35.99962 | 12 |
| CGCCCGG | 60 | 2.4652024E-4 | 22.49976 | 13 |
| CCCGGCT | 100 | 2.0433708E-5 | 17.99981 | 15 |
| CCACGCC | 125 | 7.6110664E-6 | 16.19983 | 10 |
| ACCACGC | 115 | 6.7718574E-5 | 15.652009 | 9 |
| CACCACG | 115 | 6.7718574E-5 | 15.652009 | 8 |
| CGTGAGC | 90 | 0.0037457994 | 15.002703 | 1 |
| CCGGCTA | 95 | 0.005371231 | 14.210376 | 16 |
| ATGCACC | 130 | 1.9215982E-4 | 13.847329 | 2 |
| GCCCGGC | 115 | 0.0012003465 | 13.695508 | 14 |
| CGGCTAA | 100 | 0.0075443457 | 13.499857 | 17 |
| AGGTTGC | 235 | 2.1929345E-5 | 10.531803 | 36 |
| GAGCCAC | 290 | 1.9609906E-6 | 10.087062 | 4 |
| GGCTAAT | 290 | 1.963388E-6 | 10.0861 | 18 |
| GCTAATT | 445 | 8.4946805E-10 | 9.60664 | 19 |
| CACTTGA | 290 | 2.1491687E-5 | 9.3102455 | 16 |
| GCCACCA | 370 | 4.7414505E-7 | 9.121525 | 6 |
| GTTGCAG | 255 | 5.753666E-4 | 8.823436 | 38 |
| TACAAGA | 205 | 0.0086109135 | 8.780395 | 26 |
| AGCCACC | 235 | 0.00270025 | 8.61693 | 5 |