Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378735.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 787544 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGCGGTT | 40 | 1.5604426E-5 | 33.74843 | 7 |
| GAGCGGT | 45 | 3.4845252E-5 | 30.006224 | 6 |
| AGACCGG | 45 | 3.490573E-5 | 29.998602 | 28 |
| GACCGGA | 40 | 6.166085E-4 | 28.123692 | 29 |
| GCGGTTC | 50 | 7.157854E-5 | 26.998743 | 8 |
| ACCGGAC | 45 | 0.0012265448 | 24.998835 | 30 |
| CGCGCCC | 45 | 0.0012265448 | 24.998835 | 11 |
| CGTATGC | 50 | 0.0022645942 | 22.498953 | 44 |
| CCGGACT | 50 | 0.0022645942 | 22.498953 | 31 |
| TCGTATG | 50 | 0.0022645942 | 22.498953 | 43 |
| ATGCCGA | 60 | 2.467329E-4 | 22.498953 | 22 |
| AATGCCG | 65 | 4.2379298E-4 | 20.768263 | 21 |
| GAGACCG | 65 | 4.2379298E-4 | 20.768263 | 27 |
| TCACCGA | 55 | 0.0039365166 | 20.453592 | 12 |
| CGGACTA | 55 | 0.0039365166 | 20.453592 | 32 |
| CGGAAGA | 80 | 7.536046E-5 | 19.695337 | 1 |
| CTCGTAT | 60 | 0.006510467 | 18.749126 | 42 |
| TCTCGAT | 60 | 0.006510467 | 18.749126 | 29 |
| CTCGATC | 60 | 0.006510467 | 18.749126 | 30 |
| AGAGCGG | 75 | 0.0011082571 | 18.003735 | 5 |