Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379082.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 586698 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAACGTA | 30 | 0.0051462287 | 29.998808 | 30 |
| CTCGTAT | 45 | 3.488909E-5 | 29.998806 | 42 |
| CGTCTAC | 50 | 7.154464E-5 | 26.998926 | 32 |
| CCGTCTA | 50 | 7.154464E-5 | 26.998926 | 31 |
| CCGAGAC | 50 | 7.154464E-5 | 26.998926 | 25 |
| AGAGCGG | 55 | 1.3650849E-4 | 24.550755 | 5 |
| GACCGTC | 55 | 1.3674567E-4 | 24.54448 | 29 |
| GAGCGGT | 70 | 2.6955786E-5 | 22.504858 | 6 |
| CGGAAGC | 50 | 0.0022638217 | 22.499105 | 25 |
| ATCTCGT | 60 | 2.4661754E-4 | 22.499105 | 40 |
| CGTATGC | 60 | 2.4661754E-4 | 22.499105 | 44 |
| ACCGTCT | 60 | 2.4661754E-4 | 22.499105 | 30 |
| CATCTCG | 75 | 4.599111E-5 | 20.999165 | 39 |
| AGCGGTT | 75 | 4.599111E-5 | 20.999165 | 7 |
| AGACCGT | 70 | 6.9797615E-4 | 19.284946 | 28 |
| GAGACCG | 60 | 0.0065082787 | 18.749254 | 27 |
| TCTCGTA | 75 | 0.001109639 | 17.999283 | 41 |
| GCGGTTC | 80 | 0.0017099523 | 16.874329 | 8 |
| CGGTTCA | 95 | 2.8172586E-4 | 16.578289 | 9 |
| CGGAAGA | 105 | 6.016844E-4 | 15.0045185 | 1 |