Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379227.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 664150 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATGCCGA | 35 | 2.819685E-4 | 32.141727 | 22 |
| GACCGGG | 50 | 1.9804975E-6 | 31.498894 | 29 |
| TGCCGAG | 50 | 7.155638E-5 | 26.999052 | 23 |
| ACCGGGT | 45 | 0.0012262607 | 24.999123 | 30 |
| CGTATGC | 45 | 0.0012262607 | 24.999123 | 44 |
| GCGGTTC | 45 | 0.0012262607 | 24.999123 | 8 |
| AGACCGG | 45 | 0.0012262607 | 24.999123 | 28 |
| AATGCCG | 50 | 0.0022640734 | 22.499208 | 21 |
| GAGACCG | 50 | 0.0022640734 | 22.499208 | 27 |
| GAGCGGT | 60 | 2.4665744E-4 | 22.499208 | 6 |
| TCGTATG | 50 | 0.0022640734 | 22.499208 | 43 |
| CGGGTTA | 55 | 0.003935616 | 20.453827 | 32 |
| CTCGTAT | 55 | 0.003935616 | 20.453827 | 42 |
| CGGTTCA | 55 | 0.003935616 | 20.453827 | 9 |
| AGCGGTT | 55 | 0.003935616 | 20.453827 | 7 |
| AGAGCGG | 60 | 0.0065061613 | 18.750753 | 5 |
| ATCTCGT | 60 | 0.00650899 | 18.749342 | 40 |
| TCTCGTA | 60 | 0.00650899 | 18.749342 | 41 |
| AAGAGCG | 75 | 0.0011070136 | 18.006145 | 4 |
| CCGCCAC | 95 | 2.8097813E-4 | 16.584606 | 4 |