Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378737.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 484601 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTCTCG | 20 | 7.009888E-4 | 45.02519 | 2 |
| TCTCGTA | 30 | 2.1637807E-6 | 44.99732 | 41 |
| GTAGACG | 40 | 3.4543154E-7 | 39.372654 | 33 |
| GCGGTTC | 45 | 8.6901673E-7 | 34.997913 | 8 |
| GAGACCG | 45 | 8.6901673E-7 | 34.997913 | 27 |
| CGTAGAC | 45 | 8.6901673E-7 | 34.997913 | 32 |
| CCGAGAC | 45 | 8.6901673E-7 | 34.997913 | 25 |
| GACGATC | 45 | 8.6901673E-7 | 34.997913 | 36 |
| ATCTCGT | 40 | 1.5593483E-5 | 33.74799 | 40 |
| CGGTTCA | 50 | 1.9794134E-6 | 31.498121 | 9 |
| CAGCGCG | 30 | 0.0051458557 | 29.99821 | 37 |
| CTCGTAT | 45 | 3.4881406E-5 | 29.99821 | 42 |
| CCGTAGA | 60 | 2.4153633E-7 | 29.99821 | 31 |
| GACCGTA | 55 | 4.160336E-6 | 28.634655 | 29 |
| AGACGAT | 55 | 4.160336E-6 | 28.634655 | 35 |
| AGACCGT | 55 | 4.160336E-6 | 28.634655 | 28 |
| CGTATGC | 50 | 7.152903E-5 | 26.99839 | 44 |
| TCGTATG | 50 | 7.152903E-5 | 26.99839 | 43 |
| CGGAAGA | 60 | 8.143303E-6 | 26.264696 | 1 |
| TAGACGA | 65 | 1.5220918E-5 | 24.229326 | 34 |