Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390729.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 517694 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGTATG | 30 | 2.1667965E-6 | 44.989086 | 43 |
| GACCGGG | 40 | 1.5615073E-5 | 33.741814 | 29 |
| ACCGGGA | 35 | 2.822264E-4 | 32.135063 | 30 |
| CGTATGC | 35 | 2.822264E-4 | 32.135063 | 44 |
| CTCGTAT | 35 | 2.822264E-4 | 32.135063 | 42 |
| GATCGGA | 40 | 6.1702763E-4 | 28.11818 | 18 |
| TCTCGTA | 40 | 6.1702763E-4 | 28.11818 | 41 |
| ATCTCGT | 45 | 0.0012273783 | 24.993937 | 40 |
| TATCTCG | 45 | 0.0012273783 | 24.993937 | 39 |
| CCGCTCT | 50 | 0.0022661332 | 22.494543 | 42 |
| ATCGGAA | 50 | 0.0022661332 | 22.494543 | 19 |
| AGATCGG | 55 | 0.003939191 | 20.449583 | 17 |
| CCGGGAC | 55 | 0.003939191 | 20.449583 | 31 |
| GAGACCG | 55 | 0.003939191 | 20.449583 | 27 |
| CGGGACA | 55 | 0.003939191 | 20.449583 | 32 |
| AAAAGCG | 60 | 0.006507628 | 18.749075 | 10 |
| TCGGAAG | 60 | 0.0065148915 | 18.745453 | 20 |
| GTATGCC | 60 | 0.0065148915 | 18.745453 | 45 |
| AGACCGG | 60 | 0.0065148915 | 18.745453 | 28 |
| CCGAGAC | 60 | 0.0065148915 | 18.745453 | 25 |