Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390779.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 874331 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGTACG | 40 | 1.5638789E-5 | 33.738205 | 32 |
| CCGTATC | 35 | 2.8256173E-4 | 32.131626 | 44 |
| AGATCGG | 90 | 1.2732926E-11 | 29.99123 | 17 |
| CCGGTAC | 55 | 4.1747808E-6 | 28.626356 | 31 |
| GATCGGA | 95 | 2.3646862E-11 | 28.412746 | 18 |
| GGTACGA | 50 | 7.173519E-5 | 26.990564 | 33 |
| CGAATCT | 50 | 7.173519E-5 | 26.990564 | 37 |
| GTACGAA | 50 | 7.173519E-5 | 26.990564 | 34 |
| ATCGGAA | 105 | 8.54925E-11 | 25.706768 | 19 |
| TTGCGAA | 45 | 0.0012288215 | 24.99126 | 20 |
| TCGGAAG | 100 | 3.655441E-8 | 22.492138 | 20 |
| CGTATGC | 60 | 2.472696E-4 | 22.492136 | 44 |
| CCGGCTA | 95 | 5.5441706E-7 | 21.309559 | 16 |
| ACCGGTA | 65 | 4.2471214E-4 | 20.76197 | 30 |
| TCGTATG | 65 | 4.2471214E-4 | 20.76197 | 43 |
| AAGCGGC | 90 | 8.114366E-6 | 20.0377 | 4 |
| AGACCGG | 70 | 6.9980795E-4 | 19.278975 | 28 |
| CCTTCGT | 60 | 0.006432492 | 18.788576 | 1 |
| TACGAAT | 85 | 1.2072534E-4 | 18.522936 | 35 |
| TCTCGTA | 75 | 0.0011125406 | 17.99371 | 41 |