Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378701.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 956223 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 80 | 0.0 | 36.56237 | 44 |
| AGACCGC | 80 | 0.0 | 36.56046 | 28 |
| TCTCGTA | 105 | 0.0 | 29.999897 | 41 |
| CTCGTAT | 105 | 3.6379788E-12 | 27.857046 | 42 |
| GACCGCT | 105 | 3.6379788E-12 | 27.855589 | 29 |
| GAGACCG | 120 | 1.6370905E-11 | 24.37364 | 27 |
| GAGCGGT | 125 | 2.910383E-11 | 23.408487 | 6 |
| ACCGCTG | 125 | 2.910383E-11 | 23.398693 | 30 |
| GCGGTTC | 125 | 2.910383E-11 | 23.39747 | 8 |
| CGCTGAA | 135 | 3.6379788E-12 | 23.33203 | 32 |
| CGGAAGA | 140 | 5.456968E-12 | 22.512873 | 1 |
| GTATGCC | 135 | 8.367351E-11 | 21.66659 | 45 |
| ATCTCGT | 150 | 1.4551915E-11 | 20.999928 | 40 |
| AGAGCGG | 140 | 1.364242E-10 | 20.900436 | 5 |
| TCGTATG | 140 | 1.364242E-10 | 20.891691 | 43 |
| AGCGGTT | 140 | 1.364242E-10 | 20.890598 | 7 |
| AAGAGCG | 160 | 3.8198777E-11 | 19.694641 | 4 |
| CCGCTGA | 160 | 3.8198777E-11 | 19.686401 | 31 |
| CCGAAAA | 60 | 0.0065137777 | 18.747972 | 13 |
| CCGAGAC | 145 | 4.773028E-9 | 18.61965 | 25 |