Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390684.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 851241 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACACCCG | 40 | 6.177069E-4 | 28.115456 | 12 |
| ATGCCCG | 65 | 1.5271564E-5 | 24.222548 | 12 |
| GATCGGA | 70 | 2.7090227E-5 | 22.492363 | 18 |
| CCGGCTA | 165 | 6.002665E-11 | 19.084429 | 16 |
| CGCCACC | 130 | 2.7028364E-8 | 19.079071 | 5 |
| AGATCGG | 85 | 1.2071123E-4 | 18.523123 | 17 |
| CGGCTAA | 175 | 1.4006218E-10 | 17.99389 | 17 |
| ATCGGAA | 95 | 2.825583E-4 | 16.57332 | 19 |
| TCGTATA | 110 | 4.6440597E-5 | 16.360004 | 9 |
| CCCGGCT | 225 | 1.8189894E-11 | 15.99457 | 15 |
| CCGCCAC | 115 | 6.663584E-5 | 15.683712 | 4 |
| CTTCGTA | 130 | 1.1080452E-5 | 15.573466 | 7 |
| TGCCCGG | 180 | 6.892515E-8 | 14.99491 | 13 |
| CGGTTCA | 105 | 6.0501415E-4 | 14.994909 | 29 |
| GCCCGGC | 230 | 4.2564352E-10 | 14.668933 | 14 |
| ATCTTCG | 140 | 2.18424E-5 | 14.495138 | 5 |
| CGGAAGA | 110 | 8.6072035E-4 | 14.313322 | 21 |
| TCGGAAG | 110 | 8.6072035E-4 | 14.313322 | 20 |
| CCGAGAC | 110 | 8.6072035E-4 | 14.313322 | 45 |
| CACCCGG | 95 | 0.005386613 | 14.205703 | 13 |