Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379326.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 484406 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCCTCCG | 30 | 0.005144526 | 29.999794 | 32 |
| CTCGTAT | 45 | 0.0012255795 | 24.999828 | 42 |
| AAGAGCG | 75 | 1.6943686E-6 | 23.999836 | 4 |
| AGCGGTT | 60 | 2.4647656E-4 | 22.499846 | 7 |
| TATCTCG | 60 | 2.4647656E-4 | 22.499846 | 39 |
| GAGCGGT | 60 | 2.4647656E-4 | 22.499846 | 6 |
| CGCCCGG | 50 | 0.0022628235 | 22.499844 | 13 |
| CGGAAGA | 75 | 4.5848603E-5 | 21.006361 | 1 |
| GCGGTTC | 55 | 0.0039334577 | 20.454405 | 8 |
| CGGTTCA | 55 | 0.0039334577 | 20.454405 | 9 |
| CGTATGC | 60 | 0.0065054432 | 18.74987 | 44 |
| GACCGTA | 60 | 0.0065054432 | 18.74987 | 29 |
| CACTGCG | 60 | 0.0065054432 | 18.74987 | 33 |
| CCGTAAA | 60 | 0.0065054432 | 18.74987 | 31 |
| CCGAGAC | 60 | 0.0065054432 | 18.74987 | 25 |
| GTAAGAC | 80 | 0.0017089956 | 16.874884 | 38 |
| AGAGCGG | 80 | 0.0017089956 | 16.874884 | 5 |
| ATCTCGT | 90 | 0.003749919 | 14.999897 | 40 |
| AGAGGGT | 90 | 0.003749919 | 14.999897 | 28 |
| GCCCGGC | 90 | 0.003749919 | 14.999897 | 14 |