Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390610.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 225818 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGAGGT | 45 | 0.0012241711 | 24.997662 | 33 |
| AGGTTGC | 90 | 8.209774E-6 | 19.998129 | 36 |
| GGTTGCA | 95 | 1.30925455E-5 | 18.945597 | 37 |
| TTGCAGT | 115 | 3.426947E-6 | 17.60705 | 39 |
| GTTGCAG | 115 | 3.426947E-6 | 17.60705 | 38 |
| AAGCATT | 220 | 0.0 | 17.384739 | 28 |
| GAAGCAT | 215 | 9.094947E-12 | 16.74262 | 27 |
| GCATTCT | 190 | 4.4201443E-10 | 16.577396 | 30 |
| TAATCTT | 110 | 4.6147274E-5 | 16.362108 | 19 |
| AGCATTC | 210 | 1.05501385E-10 | 16.069925 | 29 |
| AGAAGCA | 230 | 4.1654857E-10 | 14.672542 | 26 |
| TATCTTC | 240 | 7.8216544E-10 | 14.070533 | 4 |
| ACTAGAC | 100 | 0.007531012 | 13.498738 | 19 |
| GAGAATC | 150 | 4.244558E-5 | 13.498738 | 10 |
| GAGCCAC | 120 | 0.0016421609 | 13.132498 | 4 |
| GGAGGTT | 120 | 0.0016504043 | 13.123774 | 34 |
| CACTTGA | 125 | 0.0022434117 | 12.598822 | 16 |
| ATATCTT | 295 | 1.690023E-8 | 11.447212 | 3 |
| CTGGTCT | 145 | 0.0067226253 | 10.877914 | 1 |
| CAGAAGC | 230 | 1.7185592E-5 | 10.759864 | 25 |