Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390616.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 255938 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 40 | 1.55682E-5 | 33.746925 | 44 |
| TGCCCGG | 35 | 2.8157994E-4 | 32.139927 | 13 |
| ATCTCGT | 50 | 1.975075E-6 | 31.497128 | 40 |
| TCTCGTA | 45 | 3.4825265E-5 | 29.997265 | 41 |
| CGGACAT | 40 | 6.156228E-4 | 28.122437 | 32 |
| CCGGACA | 40 | 6.156228E-4 | 28.122437 | 31 |
| ACCGGAC | 50 | 7.141472E-5 | 26.997538 | 30 |
| GAGACCG | 50 | 7.141472E-5 | 26.997538 | 27 |
| CCGAGAC | 50 | 7.141472E-5 | 26.997538 | 25 |
| TCGTATG | 50 | 7.141472E-5 | 26.997538 | 43 |
| CTCGTAT | 55 | 1.3649923E-4 | 24.543217 | 42 |
| AGACCGG | 55 | 1.3649923E-4 | 24.543217 | 28 |
| GACCGGA | 60 | 2.4617635E-4 | 22.49795 | 29 |
| AGCGGTT | 65 | 4.228439E-4 | 20.767336 | 7 |
| GTATGCC | 65 | 4.228439E-4 | 20.767336 | 45 |
| CGAGACC | 65 | 4.228439E-4 | 20.767336 | 26 |
| GCGGTTC | 70 | 6.967459E-4 | 19.283957 | 8 |
| GAGCGGT | 70 | 6.967459E-4 | 19.283957 | 6 |
| TTATGGT | 60 | 0.006500415 | 18.748291 | 17 |
| GATCTCG | 90 | 1.8598328E-4 | 17.498404 | 39 |