Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379035.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 480469 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 30 | 2.163406E-6 | 44.998337 | 42 |
| TCTCGTA | 30 | 2.163406E-6 | 44.998337 | 41 |
| CCGACCG | 30 | 2.163406E-6 | 44.998337 | 31 |
| GACCGAC | 35 | 6.242286E-6 | 38.57 | 29 |
| ACCGACC | 35 | 6.242286E-6 | 38.57 | 30 |
| AAGCTCG | 25 | 0.002104122 | 36.006165 | 4 |
| CGCTGTA | 25 | 0.002106273 | 35.99867 | 45 |
| GAGCGGT | 40 | 1.5568583E-5 | 33.755775 | 6 |
| AGAGCGG | 40 | 1.5568583E-5 | 33.755775 | 5 |
| AGACCGA | 40 | 1.559079E-5 | 33.748753 | 28 |
| CCGAGAC | 50 | 1.9790168E-6 | 31.498837 | 25 |
| GCGGTTC | 45 | 3.4875404E-5 | 29.998892 | 8 |
| AGCGGTT | 45 | 3.4875404E-5 | 29.998892 | 7 |
| CGGAAGA | 50 | 7.131432E-5 | 27.010246 | 1 |
| CGGGGTT | 100 | 4.5474735E-11 | 27.010246 | 1 |
| ACCGGCA | 50 | 7.151677E-5 | 26.999002 | 34 |
| CGTATGC | 50 | 7.151677E-5 | 26.999002 | 44 |
| CGGTTCA | 50 | 7.151677E-5 | 26.999002 | 9 |
| CGACCGG | 50 | 7.151677E-5 | 26.999002 | 32 |
| AATGCCG | 50 | 7.151677E-5 | 26.999002 | 21 |