Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378731.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 780442 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGATCG | 30 | 2.1651758E-6 | 44.99827 | 31 |
| GACCGAT | 45 | 3.490338E-5 | 29.998848 | 29 |
| CGATCGA | 50 | 7.157378E-5 | 26.99896 | 32 |
| ATCTCGT | 55 | 1.36801E-4 | 24.54451 | 40 |
| AGACCGA | 55 | 1.36801E-4 | 24.54451 | 28 |
| CGTATGC | 50 | 0.0022644696 | 22.499134 | 44 |
| CTCGTAT | 50 | 0.0022644696 | 22.499134 | 42 |
| GATCGAG | 60 | 2.467167E-4 | 22.499134 | 33 |
| AGCGGTT | 60 | 2.467167E-4 | 22.499134 | 7 |
| TCTCGTA | 60 | 2.467167E-4 | 22.499134 | 41 |
| TCGAGAT | 60 | 2.467167E-4 | 22.499134 | 35 |
| GAGACCG | 75 | 4.601563E-5 | 20.999193 | 27 |
| GCGGTTC | 65 | 4.2376498E-4 | 20.768433 | 8 |
| ACCGATC | 65 | 4.2376498E-4 | 20.768433 | 30 |
| GAGCGGT | 70 | 6.976507E-4 | 19.287445 | 6 |
| TCGTATG | 60 | 0.0065101134 | 18.749279 | 43 |
| CGTGTTA | 60 | 0.0065101134 | 18.749279 | 10 |
| CGGTTCA | 75 | 0.0011100753 | 17.99931 | 9 |
| CCGAGAC | 75 | 0.0011100753 | 17.99931 | 25 |
| CCGCCAC | 105 | 3.1079584E-5 | 17.144396 | 4 |