Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378615.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 620828 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA | 2997 | 0.4827424020823803 | No Hit |
| TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA | 2341 | 0.3770770648231072 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGCCGAT | 325 | 0.0 | 44.303806 | 15 |
| TAAGCCG | 330 | 0.0 | 43.632538 | 13 |
| ATGACGT | 340 | 0.0 | 43.010933 | 20 |
| GACGTCA | 360 | 0.0 | 41.246384 | 22 |
| CCGATGA | 355 | 0.0 | 41.19357 | 17 |
| CGTCATA | 355 | 0.0 | 41.19357 | 24 |
| GCCGATG | 350 | 0.0 | 41.139248 | 16 |
| ACGTCAT | 365 | 0.0 | 40.681362 | 23 |
| TGACGTC | 360 | 0.0 | 40.62144 | 21 |
| GATGACG | 375 | 0.0 | 40.196476 | 19 |
| TTCCTCG | 255 | 0.0 | 39.7024 | 10 |
| CGATGAC | 380 | 0.0 | 39.07552 | 18 |
| TCGGGGA | 320 | 0.0 | 38.668484 | 14 |
| AATTCGG | 315 | 0.0 | 38.568047 | 20 |
| AAGCCGA | 375 | 0.0 | 38.396633 | 14 |
| CGGGGAA | 325 | 0.0 | 38.073586 | 15 |
| GGCGGTC | 320 | 0.0 | 37.96542 | 35 |
| TTCGGTA | 335 | 0.0 | 36.937057 | 22 |
| GCGGTCT | 330 | 0.0 | 36.814953 | 36 |
| TCGGTAT | 330 | 0.0 | 36.814953 | 23 |