Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379245.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 739580 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 40 | 3.456189E-7 | 39.374702 | 42 |
| CGATCGG | 40 | 3.456189E-7 | 39.374702 | 32 |
| TCGTATG | 55 | 2.746674E-9 | 36.817905 | 43 |
| CCGATCG | 50 | 1.980472E-6 | 31.499763 | 31 |
| CGCGCCT | 30 | 0.0051462753 | 29.999773 | 11 |
| CGTATGC | 55 | 4.162541E-6 | 28.636148 | 44 |
| GACCGAT | 55 | 4.162541E-6 | 28.636148 | 29 |
| GCGGTTC | 60 | 8.186864E-6 | 26.249802 | 8 |
| GAGCGGT | 60 | 8.186864E-6 | 26.249802 | 6 |
| TCTCGTA | 60 | 8.186864E-6 | 26.249802 | 41 |
| AGAGCGG | 65 | 1.5220883E-5 | 24.232225 | 5 |
| ACCGATC | 65 | 1.5228858E-5 | 24.230585 | 30 |
| AGACCGA | 65 | 1.5228858E-5 | 24.230585 | 28 |
| GATCGGA | 70 | 2.7014661E-5 | 22.49983 | 33 |
| CGGTTCA | 75 | 4.60005E-5 | 20.999842 | 9 |
| AGCGGTT | 75 | 4.60005E-5 | 20.999842 | 7 |
| GAGACCG | 80 | 7.558781E-5 | 19.687351 | 27 |
| CCGAGAC | 80 | 7.558781E-5 | 19.687351 | 25 |
| CGCCTGG | 105 | 1.4442485E-6 | 19.28557 | 13 |
| GGCGGCT | 60 | 0.006508635 | 18.749859 | 39 |