Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378663.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1238915 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGCGTT | 65 | 0.0 | 41.536633 | 31 |
| CGCGTTA | 65 | 0.0 | 41.536633 | 32 |
| ACCGCGT | 75 | 1.8189894E-12 | 35.996964 | 30 |
| GCGTTAT | 80 | 3.6379788E-12 | 33.748516 | 33 |
| CTCGTAT | 90 | 1.2732926E-11 | 29.998684 | 42 |
| CGTTATA | 95 | 2.3646862E-11 | 28.419806 | 34 |
| TCTCGTA | 105 | 8.54925E-11 | 25.713158 | 41 |
| GAGCGGT | 115 | 9.094947E-12 | 25.443935 | 6 |
| CGTATGC | 115 | 9.094947E-12 | 25.433666 | 44 |
| TCGTATG | 110 | 1.5279511E-10 | 24.544376 | 43 |
| GCGGTTC | 110 | 1.5279511E-10 | 24.543385 | 8 |
| AGCGGTT | 110 | 1.5279511E-10 | 24.543385 | 7 |
| AGACCGC | 120 | 1.6370905E-11 | 24.372946 | 28 |
| CGGTTCA | 120 | 4.5292836E-10 | 22.498102 | 9 |
| ATCTCGT | 135 | 8.367351E-11 | 21.665714 | 40 |
| GACCGCG | 125 | 7.530616E-10 | 21.59818 | 29 |
| CCGAGAC | 125 | 7.530616E-10 | 21.59818 | 25 |
| GAGACCG | 140 | 1.364242E-10 | 20.891096 | 27 |
| AATGCCG | 130 | 1.2296368E-9 | 20.767479 | 21 |
| AAGAGCG | 135 | 1.9554136E-9 | 20.007196 | 4 |