Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378759.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 772404 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGGAT | 40 | 3.4567347E-7 | 39.37432 | 30 |
| GACCGGA | 45 | 8.696188E-7 | 34.999397 | 29 |
| CGGATGT | 50 | 1.9807721E-6 | 31.499456 | 32 |
| TCGTATG | 50 | 1.9817744E-6 | 31.497417 | 43 |
| CGGGGAC | 30 | 0.0051385183 | 30.009197 | 5 |
| CGTATGC | 55 | 4.165271E-6 | 28.634014 | 44 |
| ATCTCGT | 60 | 8.188097E-6 | 26.249546 | 40 |
| CCGGATG | 60 | 8.188097E-6 | 26.249546 | 31 |
| CTCGTAT | 60 | 8.192215E-6 | 26.247849 | 42 |
| GAGCGGT | 65 | 1.5200621E-5 | 24.236626 | 6 |
| AGCGGTT | 65 | 1.5231144E-5 | 24.23035 | 7 |
| CGGAAGA | 70 | 2.6964697E-5 | 22.505438 | 1 |
| GCGGTTC | 70 | 2.7018708E-5 | 22.49961 | 8 |
| TCTCGTA | 70 | 2.7032225E-5 | 22.498154 | 41 |
| AGAGCGG | 80 | 7.541112E-5 | 19.693535 | 5 |
| AGACCGG | 80 | 7.559902E-5 | 19.68716 | 28 |
| CGCCACT | 110 | 2.2557997E-6 | 18.407581 | 9 |
| CCGAGAC | 75 | 0.0011099036 | 17.99969 | 25 |
| CGGTTCA | 90 | 1.8658469E-4 | 17.498566 | 9 |
| AATGCCG | 85 | 0.0025644389 | 15.882078 | 21 |