Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379318.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 518746 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 30 | 0.0051453314 | 29.999231 | 42 |
| TCTCGTA | 30 | 0.0051453314 | 29.999231 | 41 |
| AGCGGTT | 40 | 6.158998E-4 | 28.12699 | 7 |
| GAGCGGT | 45 | 0.0012251418 | 25.00177 | 6 |
| TCCAACG | 70 | 2.6978267E-5 | 22.50159 | 5 |
| AGACCGG | 50 | 0.002263286 | 22.49942 | 28 |
| CCAACGA | 75 | 4.593878E-5 | 21.001484 | 6 |
| ACGAAAT | 65 | 4.2346475E-4 | 20.768696 | 9 |
| CAACGAA | 95 | 1.3127588E-5 | 18.948708 | 7 |
| CCTCCGC | 75 | 0.0011092984 | 17.999538 | 36 |
| ACCTCCG | 80 | 0.0017094306 | 16.874567 | 35 |
| CGTTTCC | 110 | 8.553813E-4 | 14.323337 | 1 |
| TACACTA | 100 | 0.007544964 | 13.499652 | 26 |
| AGGCCGA | 140 | 0.005250549 | 11.249711 | 42 |
| ACTAGAC | 185 | 3.0164074E-4 | 10.945665 | 19 |
| CATGAGC | 210 | 9.6584816E-4 | 9.646329 | 1 |
| TATCTTC | 330 | 9.849846E-7 | 9.546129 | 4 |
| CTCATGC | 240 | 0.0032673099 | 8.4372835 | 14 |
| GCACTCC | 245 | 0.003935947 | 8.265094 | 16 |
| GAAGCAT | 305 | 3.7682962E-4 | 8.114546 | 27 |