Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379069.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 746546 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GGTCGAA | 25 | 0.0021071904 | 35.99807 | 42 |
| GACCGTT | 60 | 6.4283086E-9 | 33.74819 | 29 |
| AGACCGT | 65 | 1.4029865E-8 | 31.152178 | 28 |
| ACCGTTC | 65 | 1.4029865E-8 | 31.152178 | 30 |
| GAGACCG | 70 | 2.8849172E-8 | 28.927021 | 27 |
| CGTATGC | 60 | 8.189927E-6 | 26.248594 | 44 |
| CTCGTAT | 60 | 8.189927E-6 | 26.248594 | 42 |
| TCTCGTA | 60 | 8.189927E-6 | 26.248594 | 41 |
| ATCTCGT | 80 | 2.9738203E-6 | 22.498795 | 40 |
| CGTTCTC | 100 | 3.6421625E-8 | 22.498795 | 32 |
| CCGTTCT | 90 | 3.2854405E-7 | 22.498795 | 31 |
| TCGTATG | 75 | 4.6017587E-5 | 20.998875 | 43 |
| ATCGGAA | 55 | 0.0039364877 | 20.453447 | 19 |
| CCGAGAC | 105 | 1.4449233E-6 | 19.284681 | 25 |
| CGGAAGA | 110 | 2.2448949E-6 | 18.416739 | 1 |
| AGCGCTC | 100 | 2.0460166E-5 | 17.999035 | 7 |
| GAGCGGT | 115 | 3.436151E-6 | 17.613651 | 6 |
| GCGCTCC | 115 | 3.4471486E-6 | 17.607752 | 8 |
| CGCCACT | 90 | 1.865336E-4 | 17.499062 | 9 |
| GCGGTTC | 120 | 5.170845E-6 | 16.874096 | 8 |