Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390692.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 766784 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGAACT | 40 | 1.5627269E-5 | 33.741047 | 31 |
| GCGCACC | 30 | 0.005113564 | 30.039059 | 2 |
| CCACGAT | 30 | 0.0051528793 | 29.992044 | 30 |
| AGATCGG | 55 | 4.1690437E-6 | 28.630638 | 17 |
| GATCGGA | 55 | 4.1690437E-6 | 28.630638 | 18 |
| ACCGAAC | 50 | 7.1682734E-5 | 26.99284 | 30 |
| ATCTCGT | 60 | 8.203773E-6 | 26.243038 | 40 |
| TATCTCG | 55 | 1.3700864E-4 | 24.538946 | 39 |
| TCGGAAG | 65 | 1.5260232E-5 | 24.224342 | 20 |
| GAGACCG | 60 | 2.4698098E-4 | 22.4955 | 27 |
| GACCGAA | 60 | 2.4709004E-4 | 22.494034 | 29 |
| ATCGGAA | 75 | 4.6071604E-5 | 20.9958 | 19 |
| CTCGTAT | 65 | 4.2440483E-4 | 20.763723 | 42 |
| AGACCGA | 70 | 6.989969E-4 | 19.281857 | 28 |
| CGTATGC | 70 | 6.9930375E-4 | 19.2806 | 44 |
| TCTCGTA | 70 | 6.9930375E-4 | 19.2806 | 41 |
| TCGTATG | 70 | 6.9930375E-4 | 19.2806 | 43 |
| CGCCACC | 110 | 2.2219574E-6 | 18.43667 | 5 |
| GAGCGGT | 100 | 2.0487132E-5 | 17.9964 | 26 |
| GCGGTTC | 90 | 1.8675087E-4 | 17.4965 | 28 |