Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378659.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1170081 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 125 | 0.0 | 34.20046 | 44 |
| ACCGCTC | 140 | 0.0 | 32.14191 | 30 |
| AGACCGC | 140 | 0.0 | 32.14191 | 28 |
| TCTCGTA | 135 | 0.0 | 31.66709 | 41 |
| CGCTCTA | 145 | 0.0 | 31.034895 | 32 |
| CTCGTAT | 145 | 0.0 | 29.48315 | 42 |
| GACCGCT | 160 | 0.0 | 28.124172 | 29 |
| CCGCTCT | 165 | 0.0 | 27.27309 | 31 |
| GCGGTTC | 175 | 0.0 | 26.996899 | 8 |
| TCGTATG | 170 | 0.0 | 26.469807 | 43 |
| AGCGGTT | 190 | 0.0 | 24.865562 | 7 |
| ATCTCGT | 175 | 0.0 | 24.428896 | 40 |
| CCGAGAC | 185 | 0.0 | 24.323608 | 25 |
| GAGCGGT | 195 | 0.0 | 24.237307 | 6 |
| AGAGCGG | 205 | 0.0 | 24.152857 | 5 |
| GAGACCG | 205 | 0.0 | 24.14563 | 27 |
| CGGAAGA | 190 | 0.0 | 23.69465 | 1 |
| AAGAGCG | 205 | 0.0 | 23.054998 | 4 |
| CGGTTCA | 225 | 0.0 | 21.997473 | 9 |
| AATGCCG | 220 | 0.0 | 21.475721 | 21 |