Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379331.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 512453 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGTT | 60 | 3.6379788E-12 | 41.24732 | 29 |
| ATCTCGT | 65 | 9.094947E-12 | 38.081875 | 40 |
| CTCGTAT | 65 | 9.094947E-12 | 38.081875 | 42 |
| CCGCATA | 25 | 0.0021066943 | 35.997658 | 19 |
| TCTCGTA | 70 | 2.1827873E-11 | 35.361744 | 41 |
| TCGTATG | 70 | 2.1827873E-11 | 35.354843 | 43 |
| GCGGTTC | 80 | 1.8189894E-12 | 33.747803 | 8 |
| AGACCGT | 80 | 1.8189894E-12 | 33.747803 | 28 |
| CGTATGC | 75 | 4.7293724E-11 | 32.997852 | 44 |
| GTATGCC | 75 | 4.7293724E-11 | 32.997852 | 45 |
| CGTTTAC | 75 | 4.7293724E-11 | 32.997852 | 32 |
| GAGCGGT | 85 | 5.456968E-12 | 31.76574 | 6 |
| CCGAGAC | 85 | 5.456968E-12 | 31.76264 | 25 |
| CCGTTTA | 80 | 1.0004442E-10 | 30.935488 | 31 |
| CGGAAGA | 90 | 1.2732926E-11 | 30.012691 | 1 |
| CGGTTCA | 90 | 1.2732926E-11 | 29.998049 | 9 |
| ACCGTTT | 90 | 1.2732926E-11 | 29.998049 | 30 |
| AAGAGCG | 100 | 1.8189894E-12 | 29.250952 | 4 |
| AATGCCG | 100 | 1.8189894E-12 | 29.248095 | 21 |
| TACGATC | 85 | 2.0190782E-10 | 29.121435 | 36 |