Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379286.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 494505 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGACAA | 30 | 2.1620126E-6 | 45.002934 | 31 |
| CGTATGC | 30 | 2.1635187E-6 | 44.998383 | 44 |
| ACCGACA | 35 | 6.2426134E-6 | 38.57004 | 30 |
| CCGAGAC | 35 | 6.2426134E-6 | 38.57004 | 25 |
| CGGAAGA | 40 | 1.5548476E-5 | 33.76244 | 1 |
| CGACAAC | 40 | 1.5580812E-5 | 33.752197 | 32 |
| AGACCGA | 40 | 1.5591602E-5 | 33.748787 | 28 |
| GCGGTTC | 45 | 3.4877194E-5 | 29.998922 | 8 |
| ACCGCGC | 30 | 0.00514536 | 29.998922 | 9 |
| GACCGAC | 45 | 3.4877194E-5 | 29.998922 | 29 |
| CGCGCCA | 45 | 3.4877194E-5 | 29.998922 | 7 |
| CACCGCG | 30 | 0.00514536 | 29.998922 | 8 |
| TCGCGCC | 45 | 3.4877194E-5 | 29.998922 | 6 |
| AGAGCGG | 45 | 3.4877194E-5 | 29.998922 | 5 |
| ACAACGA | 55 | 4.15652E-6 | 28.63823 | 34 |
| CAACGAT | 55 | 4.15652E-6 | 28.63823 | 35 |
| GATCGCG | 40 | 6.1624334E-4 | 28.123987 | 4 |
| CTCGTAT | 50 | 7.152041E-5 | 26.99903 | 42 |
| ATCGCGC | 50 | 7.152041E-5 | 26.99903 | 5 |
| AACGATC | 60 | 8.175077E-6 | 26.251713 | 36 |