Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390716.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 987143 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GGACCGT | 30 | 0.005156297 | 29.988821 | 44 |
| ACGCCCG | 95 | 2.1231244E-8 | 23.675385 | 12 |
| GGATCGC | 50 | 0.0022692934 | 22.491617 | 12 |
| CCTTCGT | 145 | 2.1282176E-10 | 20.21302 | 1 |
| GCTAGAC | 160 | 3.8198777E-11 | 19.681162 | 33 |
| CGTTGGA | 165 | 5.820766E-11 | 19.130308 | 5 |
| TCGTTGG | 175 | 1.3460522E-10 | 18.035316 | 4 |
| CGCCCGG | 150 | 7.2814146E-9 | 17.996029 | 13 |
| CACGCCC | 170 | 1.8353603E-9 | 17.201216 | 11 |
| ATCTTCG | 105 | 3.057115E-5 | 17.178236 | 5 |
| CTTCGTT | 175 | 2.6175258E-9 | 16.74793 | 2 |
| CGGCTAA | 165 | 2.363231E-8 | 16.360025 | 17 |
| CGGGATT | 125 | 7.6399665E-6 | 16.196426 | 14 |
| TTCGTTG | 195 | 6.2937033E-10 | 16.185541 | 3 |
| TCGTATA | 85 | 0.0025685988 | 15.878849 | 9 |
| GACCGGG | 85 | 0.0025703358 | 15.87724 | 33 |
| CCGGCTA | 185 | 5.631591E-9 | 15.8073225 | 16 |
| CGCCACC | 260 | 1.0913936E-11 | 14.7418995 | 5 |
| GAAACGG | 220 | 3.5761332E-9 | 14.315022 | 10 |
| GGAAACG | 220 | 3.5761332E-9 | 14.315022 | 9 |