Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390624.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1493008 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACTACG | 30 | 0.005155207 | 29.991114 | 35 |
| GACACGA | 50 | 0.0022692685 | 22.492582 | 17 |
| TCGGCTA | 50 | 0.0022692685 | 22.492582 | 28 |
| CCGAGAC | 135 | 1.9736035E-9 | 19.992737 | 45 |
| CCGCAGT | 60 | 0.0065250536 | 18.74319 | 21 |
| ATCGGAA | 145 | 4.796675E-9 | 18.613926 | 19 |
| AGATCGG | 150 | 7.2996045E-9 | 17.994066 | 17 |
| GATCGGA | 150 | 7.2996045E-9 | 17.994066 | 18 |
| TCGGAAG | 185 | 3.092282E-10 | 17.020844 | 20 |
| ACGCCCG | 80 | 0.0017145637 | 16.87 | 12 |
| ACCACGC | 205 | 7.4578566E-11 | 16.457436 | 9 |
| CACGCCC | 165 | 2.3692337E-8 | 16.35824 | 11 |
| CGACTTT | 85 | 0.0025712969 | 15.877117 | 17 |
| AGCGCTC | 100 | 4.1796142E-4 | 15.74428 | 7 |
| CGTGCCA | 120 | 9.577966E-5 | 15.0323105 | 3 |
| GGCGACA | 105 | 5.9405615E-4 | 15.03231 | 4 |
| AAAGCGC | 150 | 2.5178051E-6 | 15.03231 | 5 |
| CCGTGCC | 90 | 0.0037628664 | 14.995055 | 10 |
| GCGCCCG | 115 | 0.0012047639 | 13.691596 | 12 |
| GCGCTCC | 115 | 0.0012053732 | 13.690678 | 8 |