Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379252.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 717067 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTGTACG | 20 | 7.0302223E-4 | 45.001675 | 41 |
| ATCTCGT | 50 | 4.875983E-8 | 35.998825 | 40 |
| TCGTATG | 65 | 1.4015313E-8 | 31.155005 | 43 |
| CGGTTCA | 65 | 1.4024408E-8 | 31.152832 | 9 |
| ACCGGGA | 60 | 2.417528E-7 | 29.999023 | 30 |
| GACCGGG | 60 | 2.417528E-7 | 29.999023 | 29 |
| AGACCGG | 60 | 2.417528E-7 | 29.999023 | 28 |
| GTGCGCC | 30 | 0.0051468015 | 29.999023 | 24 |
| CTCGTAT | 70 | 2.8820068E-8 | 28.92965 | 42 |
| GCGGTTC | 70 | 2.8840077E-8 | 28.927631 | 8 |
| AGAGCGG | 65 | 4.8675065E-7 | 27.693338 | 5 |
| GAGCGGT | 65 | 4.8704715E-7 | 27.691406 | 6 |
| CGTATGC | 75 | 5.6308636E-8 | 27.001003 | 44 |
| ACCGCGC | 50 | 7.156295E-5 | 26.99912 | 9 |
| CCGCGCC | 50 | 7.156295E-5 | 26.99912 | 10 |
| TCTCGTA | 70 | 9.2963455E-7 | 25.715242 | 41 |
| AGCGGTT | 70 | 9.3020026E-7 | 25.71345 | 7 |
| CACCGCG | 55 | 1.3678036E-4 | 24.544657 | 8 |
| AAGAGCG | 75 | 1.6935555E-6 | 24.00424 | 4 |
| AATGCCG | 75 | 1.6966424E-6 | 23.999218 | 21 |