Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390711.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 832851 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTAGACG | 25 | 0.0021101865 | 35.988136 | 20 |
| GATCGTT | 30 | 0.005105009 | 30.049648 | 1 |
| TCCGGCC | 50 | 0.0022676387 | 22.493937 | 13 |
| GATCGGA | 55 | 0.00394179 | 20.449034 | 18 |
| TAGACGG | 60 | 0.006521422 | 18.743822 | 21 |
| CCGAGAC | 60 | 0.006521422 | 18.743822 | 45 |
| CACCGCG | 75 | 0.0010976258 | 18.029787 | 1 |
| CGCTTTG | 75 | 0.0011123318 | 17.994068 | 45 |
| ACCACGC | 140 | 6.467417E-8 | 17.679113 | 9 |
| GCGGATC | 110 | 4.5675144E-5 | 16.391703 | 4 |
| CCGCACC | 100 | 4.1132414E-4 | 15.776065 | 3 |
| CGGCTAA | 130 | 1.1084887E-5 | 15.572724 | 17 |
| GCCCGGC | 150 | 2.5786503E-6 | 14.995957 | 14 |
| TGAGCCG | 155 | 3.6266374E-6 | 14.511346 | 45 |
| ACCGCAC | 95 | 0.0053157313 | 14.234043 | 2 |
| CACCACG | 190 | 1.3298086E-7 | 14.210962 | 8 |
| AGATCGG | 95 | 0.0053839856 | 14.2066965 | 17 |
| GGCGGAT | 115 | 0.0011863854 | 13.718317 | 3 |
| CGGATCA | 135 | 2.6057492E-4 | 13.360221 | 5 |
| CCACGCC | 170 | 9.392375E-6 | 13.235701 | 10 |