Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379066.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 737363 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGACCGC | 65 | 9.094947E-12 | 38.0752 | 28 |
| GCACGTC | 25 | 0.0021028828 | 36.013027 | 3 |
| TCGTATG | 85 | 5.456968E-12 | 31.76327 | 43 |
| CTCGTAT | 80 | 1.0004442E-10 | 30.936102 | 42 |
| TCTCGTA | 80 | 1.0004442E-10 | 30.936102 | 41 |
| CTACGAA | 30 | 0.005147215 | 29.998644 | 25 |
| ACAGCGC | 30 | 0.005147215 | 29.998644 | 7 |
| CGGAAGA | 105 | 3.6379788E-12 | 27.867222 | 1 |
| ATCTCGT | 105 | 3.6379788E-12 | 27.85588 | 40 |
| CGTATGC | 90 | 3.947207E-10 | 27.498758 | 44 |
| TCGTGCC | 60 | 8.171986E-6 | 26.255936 | 6 |
| GAGACCG | 95 | 7.403287E-10 | 26.051453 | 27 |
| GACCGCA | 100 | 1.3442332E-9 | 24.74888 | 29 |
| CGGTTCA | 110 | 1.5097612E-10 | 24.544346 | 9 |
| CCGAGAC | 110 | 1.5097612E-10 | 24.544346 | 25 |
| CGCAGGC | 95 | 2.1138476E-8 | 23.683138 | 32 |
| GCAGGCG | 95 | 2.1138476E-8 | 23.683138 | 33 |
| GGCGATC | 95 | 2.1138476E-8 | 23.683138 | 36 |
| ACCGCAG | 105 | 2.3646862E-9 | 23.570362 | 30 |
| GAGCGGT | 115 | 2.6375346E-10 | 23.48357 | 6 |