Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390747.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 857829 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGTATC | 35 | 2.8237305E-4 | 32.135197 | 32 |
| CTATCCG | 30 | 0.0051510725 | 29.994598 | 26 |
| CTCGTAG | 30 | 0.005152541 | 29.99285 | 43 |
| TCGTACC | 30 | 0.005152541 | 29.99285 | 35 |
| GCGAGTG | 40 | 6.1713543E-4 | 28.119936 | 9 |
| CCGGTAT | 45 | 0.001228006 | 24.994043 | 31 |
| CGTATGC | 55 | 1.370022E-4 | 24.539606 | 44 |
| GACCGGT | 50 | 0.0022672834 | 22.494638 | 29 |
| AGCGGTG | 65 | 4.198967E-4 | 20.797012 | 3 |
| CTCGTAT | 65 | 4.243844E-4 | 20.764282 | 42 |
| TTGCGTA | 55 | 0.0039398423 | 20.450863 | 26 |
| CTTCGTA | 115 | 1.5971818E-7 | 19.561693 | 7 |
| ATCTCGT | 70 | 6.992698E-4 | 19.281118 | 40 |
| TCTCGTA | 70 | 6.992698E-4 | 19.281118 | 41 |
| ACCGGTA | 60 | 0.0065181446 | 18.745531 | 30 |
| ACTAGAC | 280 | 0.0 | 18.479893 | 19 |
| TCGTATA | 100 | 2.0488229E-5 | 17.99676 | 9 |
| ATCTTCG | 115 | 3.4029272E-6 | 17.632248 | 5 |
| TATCTCG | 80 | 0.0017130974 | 16.870977 | 39 |
| TCGTATG | 80 | 0.0017130974 | 16.870977 | 43 |