Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378725.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 729072 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 55 | 1.1271368E-7 | 32.72598 | 44 |
| GCGGTTC | 55 | 1.1271368E-7 | 32.72598 | 8 |
| GATCGTT | 30 | 0.0051470357 | 29.998812 | 12 |
| GACCGTC | 60 | 2.4177643E-7 | 29.998812 | 29 |
| CGGTTCA | 70 | 2.8843715E-8 | 28.927423 | 9 |
| CGGAAGA | 65 | 4.8505535E-7 | 27.70451 | 1 |
| CGTCTGT | 65 | 4.8709626E-7 | 27.691212 | 32 |
| GAGACCG | 65 | 4.8709626E-7 | 27.691212 | 27 |
| AGAGCGG | 70 | 9.28625E-7 | 25.718557 | 5 |
| TCGTTGG | 140 | 0.0 | 24.111147 | 4 |
| GAGCGGT | 75 | 1.6937756E-6 | 24.003986 | 6 |
| CTCGTAT | 75 | 1.6968115E-6 | 23.999048 | 42 |
| CCGTCTG | 75 | 1.6968115E-6 | 23.999048 | 31 |
| AGCGGTT | 75 | 1.6968115E-6 | 23.999048 | 7 |
| TCTCGTA | 75 | 1.6968115E-6 | 23.999048 | 41 |
| AGACCGT | 75 | 1.6968115E-6 | 23.999048 | 28 |
| ACCGTCT | 75 | 1.6968115E-6 | 23.999048 | 30 |
| ATGCCGA | 90 | 3.2847856E-7 | 22.49911 | 22 |
| TGCCGAG | 80 | 2.9733E-6 | 22.49911 | 23 |
| CGTTGGA | 155 | 1.8189894E-12 | 21.777813 | 5 |