Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390679.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 962414 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATTGCGC | 40 | 6.106466E-4 | 28.171228 | 5 |
| TCTCGTA | 45 | 0.0012284258 | 24.992956 | 41 |
| TCGTATG | 55 | 1.3705951E-4 | 24.53854 | 43 |
| TTGCGCC | 50 | 0.0022428355 | 22.536983 | 6 |
| GACGGAA | 50 | 0.0022680543 | 22.493662 | 23 |
| GTACGTG | 55 | 0.00393895 | 20.451971 | 11 |
| CTAGACG | 55 | 0.003942508 | 20.448782 | 20 |
| CGCCCGG | 135 | 1.9663275E-9 | 19.996443 | 13 |
| CCTTCGT | 95 | 1.2998813E-5 | 18.973574 | 1 |
| TACGTGA | 60 | 0.006520341 | 18.744719 | 12 |
| AAAGCGC | 100 | 2.017363E-5 | 18.029587 | 5 |
| CCGGCTA | 155 | 1.0917574E-8 | 17.416258 | 16 |
| CGGCTAA | 155 | 1.0917574E-8 | 17.416258 | 17 |
| ACCACGC | 205 | 7.4578566E-11 | 16.46391 | 9 |
| AAGCGCT | 110 | 4.5714965E-5 | 16.390533 | 6 |
| ACGGAAG | 110 | 4.6474524E-5 | 16.359026 | 24 |
| CCACGCC | 200 | 9.276846E-10 | 15.750473 | 10 |
| GCCCGGC | 235 | 3.6379788E-11 | 15.316425 | 14 |
| GCGGAGG | 120 | 9.772969E-5 | 14.995774 | 32 |
| CACGCCC | 140 | 2.23187E-5 | 14.462464 | 11 |