Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378711.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 823375 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGTA | 45 | 1.927583E-8 | 39.999138 | 29 |
| CGTACTA | 45 | 1.927583E-8 | 39.999138 | 32 |
| ACCGTAC | 50 | 4.8770744E-8 | 35.99922 | 30 |
| GCGGTTC | 65 | 1.4028046E-8 | 31.153173 | 8 |
| CCGTACT | 60 | 2.418019E-7 | 29.999352 | 31 |
| CTCGTAT | 70 | 2.8847353E-8 | 28.927946 | 42 |
| TCTCGTA | 75 | 5.6363206E-8 | 26.999418 | 41 |
| CGGTTCA | 80 | 1.0532494E-7 | 25.311954 | 9 |
| AGCGGTT | 80 | 1.0532494E-7 | 25.311954 | 7 |
| CTGTCGG | 45 | 0.0012264134 | 24.999462 | 40 |
| CGTATGC | 75 | 1.6969898E-6 | 23.999483 | 44 |
| TCGTATG | 75 | 1.6969898E-6 | 23.999483 | 43 |
| GAGCGGT | 90 | 3.2814387E-7 | 22.502249 | 6 |
| CGCTATA | 50 | 0.002264353 | 22.499514 | 23 |
| CCGAGAC | 95 | 5.5289456E-7 | 21.315329 | 25 |
| GAGACCG | 85 | 5.0302897E-6 | 21.176012 | 27 |
| ATCTCGT | 100 | 9.050382E-7 | 20.249563 | 40 |
| CATCTCG | 90 | 8.24812E-6 | 19.999569 | 39 |
| AGACCGT | 90 | 8.24812E-6 | 19.999569 | 28 |
| AGAGCGG | 105 | 1.4431698E-6 | 19.287642 | 5 |