Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390723.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 686243 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGTATA | 55 | 0.003936827 | 20.452858 | 9 |
| CCAACGA | 70 | 6.911806E-4 | 19.313679 | 6 |
| CCCTATA | 85 | 1.20565186E-4 | 18.525183 | 25 |
| CGTTGGA | 100 | 2.0193478E-5 | 18.0261 | 5 |
| TCCAACG | 75 | 0.0010988653 | 18.0261 | 5 |
| TGAGCCG | 130 | 5.788024E-7 | 17.303741 | 45 |
| GCAACTC | 100 | 4.1229074E-4 | 15.770535 | 3 |
| ATCTTCG | 90 | 0.0037158688 | 15.02175 | 5 |
| CCTTCGT | 120 | 9.6294105E-5 | 15.020654 | 1 |
| AAACGGG | 120 | 9.7559576E-5 | 14.997667 | 11 |
| CGGGATT | 90 | 0.0037575716 | 14.996575 | 14 |
| ACCACGC | 115 | 0.0012016625 | 13.694521 | 9 |
| TCTGTCG | 100 | 0.0074749473 | 13.519575 | 6 |
| CTTCGTA | 100 | 0.007551067 | 13.498885 | 7 |
| AACGGGA | 100 | 0.0075583505 | 13.496918 | 12 |
| TCGTTGG | 140 | 3.561522E-4 | 12.8748455 | 4 |
| GAAACGG | 140 | 3.6056698E-4 | 12.856081 | 10 |
| GGAAACG | 140 | 3.6056698E-4 | 12.856081 | 9 |
| CCACGCC | 125 | 0.0022513142 | 12.598959 | 10 |
| GTATGAT | 145 | 4.8534403E-4 | 12.410958 | 27 |