Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390709.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 606120 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCGGA | 55 | 1.3708748E-4 | 24.535645 | 18 |
| CTTCGTT | 70 | 2.6555555E-5 | 22.548674 | 2 |
| AGATCGG | 60 | 2.4723218E-4 | 22.491007 | 17 |
| ATCGGAA | 70 | 6.9970527E-4 | 19.278008 | 19 |
| GTGGCGA | 60 | 0.0065220604 | 18.742506 | 36 |
| TCTCGAT | 100 | 2.043815E-5 | 18.00023 | 9 |
| CTACTCG | 115 | 3.4563745E-6 | 17.601658 | 32 |
| TCGGAAG | 80 | 0.0017141636 | 16.868258 | 20 |
| TACTCGG | 120 | 5.1846637E-6 | 16.868256 | 33 |
| CGTTGGA | 90 | 0.0036895094 | 15.037422 | 5 |
| TCGTTGG | 90 | 0.003697642 | 15.032448 | 4 |
| CGGAAGA | 90 | 0.0037611837 | 14.994005 | 21 |
| CTCGATC | 125 | 1.3785964E-4 | 14.400185 | 10 |
| CCGAGAC | 110 | 8.60609E-4 | 14.312459 | 45 |
| ATCGCTT | 95 | 0.0053716744 | 14.210709 | 8 |
| GCGGTTC | 95 | 0.0053863972 | 14.204847 | 28 |
| GCTACTC | 290 | 5.456968E-12 | 13.959935 | 31 |
| TCGCTTG | 100 | 0.0075449636 | 13.500173 | 9 |
| CGGTTCA | 100 | 0.007565583 | 13.494605 | 29 |
| AGCGGTT | 100 | 0.007565583 | 13.494605 | 27 |