Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390759.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 712169 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCACGC | 120 | 1.10685505E-8 | 20.619402 | 9 |
| CGTATAA | 60 | 0.0064342185 | 18.787123 | 4 |
| TCGTTGG | 145 | 9.436735E-8 | 17.102758 | 4 |
| CGGGATT | 120 | 5.180904E-6 | 16.870419 | 14 |
| GGCGGAG | 135 | 8.601801E-7 | 16.66097 | 31 |
| CTTCGTT | 95 | 2.7752714E-4 | 16.61177 | 2 |
| CCTTCGT | 110 | 4.5556968E-5 | 16.396032 | 1 |
| CCACGCC | 185 | 5.6261342E-9 | 15.806519 | 10 |
| CGTTGGA | 170 | 5.7438956E-7 | 14.588675 | 5 |
| ACTAGAC | 270 | 2.1827873E-11 | 14.16282 | 19 |
| TTCGTTG | 160 | 4.9179325E-6 | 14.090341 | 3 |
| ACGGGAT | 130 | 1.9289464E-4 | 13.842395 | 13 |
| AAACGGG | 215 | 4.0756277E-8 | 13.600958 | 11 |
| GCTAATT | 465 | 0.0 | 13.544709 | 19 |
| CGCCACC | 150 | 4.1846793E-5 | 13.527679 | 5 |
| GCCCGGC | 135 | 2.6558238E-4 | 13.329713 | 14 |
| GAAACGG | 220 | 5.5082637E-8 | 13.291844 | 10 |
| CACGCCC | 125 | 0.0022546551 | 12.596579 | 11 |
| GGAAACG | 200 | 3.6677757E-6 | 12.371641 | 9 |
| AGGCGGA | 130 | 0.0030272976 | 12.111245 | 30 |