Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379287.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 315376 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGGTTC | 25 | 3.8848317E-5 | 44.99905 | 8 |
| AGCGGTT | 25 | 3.8848317E-5 | 44.99905 | 7 |
| AATGCCG | 25 | 3.8848317E-5 | 44.99905 | 21 |
| GAGCGGT | 25 | 3.8848317E-5 | 44.99905 | 6 |
| CTCGTAT | 30 | 1.138186E-4 | 37.499207 | 42 |
| GACCGTC | 30 | 1.138186E-4 | 37.499207 | 29 |
| CGGTTCA | 30 | 1.138186E-4 | 37.499207 | 9 |
| CCGAGAC | 30 | 1.138186E-4 | 37.499207 | 25 |
| CGAGGTG | 25 | 0.0021033757 | 36.004948 | 2 |
| CGTATGC | 35 | 2.816118E-4 | 32.142174 | 44 |
| TCTCGTA | 35 | 2.816118E-4 | 32.142174 | 41 |
| AGACCGT | 35 | 2.816118E-4 | 32.142174 | 28 |
| ATGCCGA | 35 | 2.816118E-4 | 32.142174 | 22 |
| GCGCTCC | 30 | 0.0051421938 | 29.999365 | 8 |
| CCGAGGT | 40 | 6.139792E-4 | 28.137789 | 1 |
| TCGTATG | 40 | 6.156906E-4 | 28.124405 | 43 |
| AGAGCGG | 40 | 6.156906E-4 | 28.124405 | 5 |
| CGCTCCA | 50 | 7.143243E-5 | 26.99943 | 9 |
| AAGAGCG | 45 | 0.0012236004 | 25.003435 | 4 |
| GAGACCG | 45 | 0.0012247324 | 24.99947 | 27 |