Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379077.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 667197 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATTCGTC | 25 | 0.0021070796 | 35.9979 | 16 |
| CGGAAGG | 30 | 0.0051471954 | 29.998251 | 13 |
| GAGCGGT | 45 | 0.0012248253 | 25.004164 | 6 |
| ATCTCGT | 45 | 0.0012264322 | 24.99854 | 40 |
| CTCGTAT | 45 | 0.0012264322 | 24.99854 | 42 |
| GACCGAC | 45 | 0.0012264322 | 24.99854 | 29 |
| ACCGACA | 45 | 0.0012264322 | 24.99854 | 30 |
| TCGTATG | 45 | 0.0012264322 | 24.99854 | 43 |
| CCGACAT | 45 | 0.0012264322 | 24.99854 | 31 |
| CGACATC | 50 | 0.002264389 | 22.498688 | 32 |
| AGCGGTT | 50 | 0.002264389 | 22.498688 | 7 |
| CGGAAGA | 65 | 4.22021E-4 | 20.78048 | 1 |
| CGTATGC | 55 | 0.003936162 | 20.453352 | 44 |
| CGGTTCA | 55 | 0.003936162 | 20.453352 | 9 |
| AGACCGA | 55 | 0.003936162 | 20.453352 | 28 |
| AGAGCGG | 60 | 0.00649863 | 18.754528 | 5 |
| GCGGTTC | 60 | 0.00650989 | 18.748907 | 8 |
| TCTCGTA | 60 | 0.00650989 | 18.748907 | 41 |
| ATGCCGA | 60 | 0.00650989 | 18.748907 | 22 |
| ATGGCGT | 75 | 0.0011099939 | 17.998951 | 31 |