Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378708.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 981312 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGAT | 30 | 1.1399672E-4 | 37.49907 | 29 |
| GCGGTTC | 45 | 3.4909222E-5 | 29.999252 | 8 |
| GAGACCG | 45 | 3.4909222E-5 | 29.999252 | 27 |
| GAGCGGT | 50 | 7.156083E-5 | 27.000702 | 6 |
| GGAGCGC | 50 | 7.158566E-5 | 26.999327 | 41 |
| CGTATGC | 45 | 0.0012266049 | 24.999378 | 44 |
| ACCGATA | 45 | 0.0012266049 | 24.999378 | 30 |
| TCTCGTA | 45 | 0.0012266049 | 24.999378 | 41 |
| AAGAGCG | 55 | 1.3677617E-4 | 24.546093 | 4 |
| AGACCGA | 75 | 1.6975919E-6 | 23.999403 | 28 |
| GAGCGCT | 60 | 2.467568E-4 | 22.499441 | 42 |
| CTCGTAT | 50 | 0.002264704 | 22.49944 | 42 |
| CCGATAG | 50 | 0.002264704 | 22.49944 | 31 |
| GGGCGAC | 70 | 6.983647E-4 | 19.285233 | 28 |
| ACAGCCG | 60 | 0.0065107695 | 18.749535 | 19 |
| CGATAGT | 60 | 0.0065107695 | 18.749535 | 32 |
| AGAGCGG | 75 | 0.0011098719 | 18.00047 | 5 |
| AGCGGTT | 75 | 0.0011102515 | 17.999552 | 7 |
| CGGTTCA | 80 | 0.0017108897 | 16.87458 | 9 |
| GGCGAAA | 80 | 0.0017108897 | 16.87458 | 45 |