Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390717.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 656454 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGATCGG | 55 | 4.1716285E-6 | 28.6273 | 17 |
| GATCGGA | 60 | 8.204694E-6 | 26.241693 | 18 |
| CTTCGTT | 75 | 1.6702779E-6 | 24.041845 | 2 |
| TCGGAAG | 80 | 2.9797084E-6 | 22.492878 | 20 |
| ATCGGAA | 70 | 2.707324E-5 | 22.492878 | 19 |
| CCTTCGT | 95 | 5.432448E-7 | 21.352955 | 1 |
| ACGGTGG | 95 | 1.3145611E-5 | 18.947144 | 7 |
| GGGCACG | 60 | 0.0064424598 | 18.782694 | 3 |
| CGGAAGC | 60 | 0.006519493 | 18.744066 | 25 |
| GCACGGT | 85 | 1.18538934E-4 | 18.56597 | 5 |
| AGAGCGG | 85 | 1.2063665E-4 | 18.523548 | 25 |
| CGTTGGA | 140 | 6.319351E-8 | 17.713453 | 5 |
| TCGTTGG | 130 | 5.6733734E-7 | 17.336546 | 4 |
| CACGGTG | 105 | 3.0569667E-5 | 17.17668 | 6 |
| GGCACGG | 95 | 2.7814714E-4 | 16.606586 | 4 |
| AAGAGCG | 95 | 2.8238547E-4 | 16.5737 | 24 |
| AGCGGTT | 95 | 2.8238547E-4 | 16.5737 | 27 |
| GAGCGGT | 95 | 2.8238547E-4 | 16.5737 | 26 |
| CGGGATT | 125 | 7.639112E-6 | 16.194872 | 14 |
| CGCCACC | 100 | 4.1016596E-4 | 15.7810755 | 5 |