Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379228.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 519328 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGGTTC | 50 | 7.152327E-5 | 26.999249 | 8 |
| CGGTTCA | 50 | 7.152327E-5 | 26.999249 | 9 |
| GACCGAG | 50 | 7.152327E-5 | 26.999249 | 29 |
| GAGCGGT | 50 | 7.152327E-5 | 26.999249 | 6 |
| AGACCGA | 45 | 0.0012258482 | 24.999304 | 28 |
| AAGAGCG | 55 | 1.3661574E-4 | 24.547134 | 4 |
| AGAGCGG | 55 | 1.3661574E-4 | 24.547134 | 5 |
| TCGTATA | 60 | 2.4654472E-4 | 22.499374 | 9 |
| CGAGAAC | 50 | 0.0022633171 | 22.499374 | 32 |
| ATGCCGA | 60 | 2.4654472E-4 | 22.499374 | 22 |
| CGTATAA | 65 | 4.234716E-4 | 20.768654 | 10 |
| GAGACCG | 55 | 0.003934311 | 20.453978 | 27 |
| CCGAGAC | 55 | 0.003934311 | 20.453978 | 25 |
| AGCGGTT | 70 | 6.9777214E-4 | 19.285177 | 7 |
| TGCCGAG | 70 | 6.9777214E-4 | 19.285177 | 23 |
| TCTTCGT | 90 | 1.8635899E-4 | 17.499512 | 6 |
| TTCGTAT | 80 | 0.001709459 | 16.87453 | 8 |
| CTTCGTA | 85 | 0.0025631024 | 15.88191 | 7 |
| CGGAAGA | 90 | 0.003741324 | 15.005362 | 1 |
| ATCTTCG | 105 | 6.025832E-4 | 15.001027 | 5 |