Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379274.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 673726 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGACCGG | 35 | 6.2449326E-6 | 38.570984 | 28 |
| CCGCATA | 30 | 1.1394976E-4 | 37.49957 | 15 |
| GCGGTTC | 40 | 1.5597356E-5 | 33.749607 | 8 |
| ATGCCGA | 40 | 1.5597356E-5 | 33.749607 | 22 |
| CGCATAT | 30 | 0.0051460536 | 29.999657 | 16 |
| ATCTCGT | 45 | 3.4889974E-5 | 29.999653 | 40 |
| CGTATGC | 45 | 3.4889974E-5 | 29.999653 | 44 |
| GACCGGA | 45 | 3.4889974E-5 | 29.999653 | 29 |
| GCCGCAT | 40 | 6.163891E-4 | 28.124674 | 14 |
| TCGTATG | 50 | 7.154637E-5 | 26.999691 | 43 |
| CGGAAGA | 55 | 1.3654237E-4 | 24.550636 | 1 |
| CGGAAAG | 55 | 1.3674892E-4 | 24.54517 | 32 |
| GAGACCG | 55 | 1.3674892E-4 | 24.54517 | 27 |
| TCTCGTA | 55 | 1.3674892E-4 | 24.54517 | 41 |
| CTCGTAT | 65 | 1.5226713E-5 | 24.230488 | 42 |
| ACCGGAA | 60 | 2.466231E-4 | 22.499743 | 30 |
| CCGGAAA | 65 | 4.2360526E-4 | 20.76899 | 31 |
| CGCCCGG | 65 | 4.2360526E-4 | 20.76899 | 13 |
| TGCCGAG | 65 | 4.2360526E-4 | 20.76899 | 23 |
| AAGAGCG | 70 | 6.9764187E-4 | 19.286924 | 4 |