Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378756.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 902752 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGATCGG | 30 | 0.0051477645 | 29.998707 | 17 |
| CGGTTCA | 65 | 4.8732727E-7 | 27.691113 | 9 |
| TCGTATG | 50 | 7.158825E-5 | 26.998838 | 43 |
| GCGGTTC | 60 | 8.191742E-6 | 26.248869 | 8 |
| CGTATGC | 60 | 2.4676594E-4 | 22.499031 | 44 |
| CTCGTAT | 60 | 2.4676594E-4 | 22.499031 | 42 |
| AGCGGTT | 70 | 2.7030621E-5 | 22.499031 | 7 |
| AGACCGA | 60 | 2.4676594E-4 | 22.499031 | 28 |
| ACCGAGA | 65 | 4.2384936E-4 | 20.768333 | 30 |
| GAGACCG | 65 | 4.2384936E-4 | 20.768333 | 27 |
| GACCGAG | 70 | 6.983904E-4 | 19.284883 | 29 |
| ATCTCGT | 75 | 0.0011102937 | 17.999224 | 40 |
| GAGCGGT | 90 | 1.8625731E-4 | 17.503124 | 6 |
| AGAGCGG | 90 | 1.8625731E-4 | 17.503124 | 5 |
| GACTCCG | 80 | 0.0017065201 | 16.880817 | 3 |
| TCTCGTA | 80 | 0.0017109541 | 16.874273 | 41 |
| GCGCTTT | 85 | 0.0025653308 | 15.881668 | 12 |
| ATGCCGA | 100 | 4.1671703E-4 | 15.749322 | 22 |
| CGGAGGT | 100 | 4.1671703E-4 | 15.749322 | 33 |
| TGCCGAG | 110 | 8.5886277E-4 | 14.317566 | 23 |