Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390691.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 942927 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTTGAT | 50 | 0.0022338144 | 22.55256 | 6 |
| TGCCCCG | 70 | 6.9998275E-4 | 19.278488 | 31 |
| ACCACGC | 230 | 0.0 | 17.606766 | 9 |
| CCACGCC | 255 | 0.0 | 16.762867 | 10 |
| AGCGCTC | 110 | 4.6404442E-5 | 16.361843 | 7 |
| CGTGAGC | 160 | 2.8926297E-7 | 15.500763 | 1 |
| CACGCCC | 175 | 4.875801E-8 | 15.424426 | 11 |
| CGCCACC | 120 | 9.557186E-5 | 15.03504 | 5 |
| CGGAGGT | 120 | 9.780388E-5 | 14.994379 | 33 |
| CACCACG | 260 | 1.0913936E-11 | 14.709927 | 8 |
| AAAGCGC | 140 | 2.1805601E-5 | 14.4980755 | 5 |
| AGGCGGA | 190 | 1.3370482E-7 | 14.205201 | 30 |
| GCGGAGG | 120 | 0.0016607031 | 13.120081 | 32 |
| AAGCGCT | 155 | 5.6819044E-5 | 13.095035 | 6 |
| GGAGGCG | 190 | 2.068875E-6 | 13.021434 | 28 |
| GAGCCAC | 525 | 0.0 | 12.456279 | 4 |
| TCGGCTC | 220 | 7.949402E-7 | 12.268128 | 22 |
| GGCGGAG | 165 | 1.0461701E-4 | 12.268128 | 31 |
| CGGCTCA | 220 | 7.949402E-7 | 12.268128 | 23 |
| ACGCCCA | 150 | 6.4674154E-4 | 11.995502 | 12 |