Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378668.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1031964 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGATTA | 55 | 2.752131E-9 | 36.81457 | 31 |
| TCTCGTA | 55 | 2.752131E-9 | 36.81457 | 41 |
| CGTATGC | 65 | 3.6743586E-10 | 34.611996 | 44 |
| ACCGATT | 60 | 6.4374035E-9 | 33.746693 | 30 |
| CGATTAC | 60 | 6.4374035E-9 | 33.746693 | 32 |
| GACCGAT | 55 | 1.12848284E-7 | 32.724064 | 29 |
| AGCGGTT | 80 | 3.3978722E-9 | 28.122246 | 7 |
| AGCGACT | 40 | 6.169247E-4 | 28.122246 | 14 |
| CTCGTAT | 75 | 5.6434146E-8 | 26.997355 | 42 |
| GCGGTTC | 80 | 1.0545773E-7 | 25.310022 | 8 |
| AGACCGA | 75 | 1.698816E-6 | 23.997648 | 28 |
| CGGTTCA | 85 | 1.8950595E-7 | 23.821196 | 9 |
| ATCTCGT | 90 | 3.2878415E-7 | 22.498884 | 40 |
| GAGACCG | 80 | 2.9767962E-6 | 22.497797 | 27 |
| TCGTATG | 90 | 3.2893695E-7 | 22.497795 | 43 |
| CGGAAGA | 95 | 5.4895463E-7 | 21.332308 | 1 |
| AATGCCG | 100 | 9.057385E-7 | 20.248999 | 21 |
| GAGCGGT | 105 | 1.4392645E-6 | 19.294107 | 6 |
| ATGCCGA | 105 | 1.445962E-6 | 19.284758 | 22 |
| AAGAGCG | 110 | 2.2461627E-6 | 18.417103 | 4 |