Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390753.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 962875 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TATGCGT | 25 | 0.002109483 | 35.99115 | 28 |
| TCGTACA | 25 | 0.002109483 | 35.99115 | 16 |
| GGCGCAA | 45 | 3.496124E-5 | 29.992626 | 13 |
| GATCGGA | 95 | 2.1200321E-8 | 23.678389 | 18 |
| TCGTAGA | 50 | 0.0022682664 | 22.493301 | 37 |
| AGATCGG | 105 | 6.121081E-8 | 21.423304 | 17 |
| CGCAATC | 55 | 0.0039416896 | 20.449516 | 15 |
| GACCGTA | 55 | 0.003942875 | 20.448456 | 29 |
| ATCGGAA | 115 | 1.5988007E-7 | 19.560408 | 19 |
| ACCGTAT | 60 | 0.006520947 | 18.74442 | 30 |
| ACCACGC | 165 | 1.2314558E-9 | 17.725677 | 9 |
| TCGGAAG | 135 | 8.6055843E-7 | 16.661705 | 20 |
| CCACGCC | 190 | 7.999915E-9 | 15.393351 | 10 |
| CGCACCA | 90 | 0.0037091041 | 15.026747 | 5 |
| AGAGCGG | 180 | 6.887785E-8 | 14.996313 | 25 |
| GCGGAGG | 165 | 4.2119063E-7 | 14.995535 | 32 |
| ACGCCCA | 90 | 0.0037607744 | 14.995534 | 12 |
| CCGAGAC | 150 | 2.580422E-6 | 14.995534 | 45 |
| GCGGTTC | 155 | 3.6249057E-6 | 14.512561 | 28 |
| AGCGGTT | 155 | 3.6249057E-6 | 14.512561 | 27 |