Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390652.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 792299 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GAGCGCT | 35 | 2.8241205E-4 | 32.134064 | 45 |
| GTCGTTC | 30 | 0.005115136 | 30.03729 | 3 |
| CCGTGCC | 30 | 0.0051531917 | 29.991796 | 10 |
| CATCGTC | 30 | 0.0051531917 | 29.991796 | 42 |
| CGCACCC | 30 | 0.0051531917 | 29.991796 | 11 |
| GATCGGA | 145 | 0.0 | 23.273903 | 18 |
| ATCGGAA | 145 | 0.0 | 23.272432 | 19 |
| TCGGAAG | 150 | 0.0 | 22.493845 | 20 |
| AGATCGG | 140 | 1.364242E-10 | 20.891098 | 17 |
| CGCCCGG | 55 | 0.003937393 | 20.452824 | 13 |
| CCGAGAC | 150 | 3.45608E-10 | 19.494665 | 45 |
| CGGCTAA | 85 | 1.2046179E-4 | 18.527853 | 17 |
| CGTATAA | 85 | 1.206368E-4 | 18.524345 | 10 |
| CGGAAGA | 160 | 8.1854523E-10 | 18.27625 | 21 |
| AAAGCGC | 115 | 3.4053264E-6 | 17.630585 | 5 |
| CCGGCTA | 90 | 1.8659537E-4 | 17.498528 | 16 |
| AAGCGCT | 145 | 9.520227E-8 | 17.090181 | 6 |
| GCCACCG | 120 | 5.108237E-6 | 16.895975 | 6 |
| ACCCGGC | 80 | 0.0017111741 | 16.87358 | 14 |
| GCGGTTC | 175 | 2.6884663E-9 | 16.71288 | 28 |