Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378769.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 889494 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGAT | 35 | 2.8200133E-4 | 32.142574 | 29 |
| TTCGCCA | 50 | 0.0022643253 | 22.499804 | 9 |
| AGACCGA | 55 | 0.0039360486 | 20.454367 | 28 |
| GCGGTTC | 70 | 6.982183E-4 | 19.285545 | 8 |
| TTTCGCC | 60 | 0.0065096943 | 18.749836 | 8 |
| CCGTGTG | 60 | 0.0065096943 | 18.749836 | 25 |
| CCGAGTA | 75 | 0.0011100203 | 17.999842 | 4 |
| CGAGTAG | 80 | 0.0017105344 | 16.874853 | 5 |
| CGGTTCA | 80 | 0.0017105344 | 16.874853 | 9 |
| AGAGCGG | 80 | 0.0017105344 | 16.874853 | 5 |
| CGGAAGA | 85 | 0.0025618179 | 15.884894 | 1 |
| AGCGGTT | 85 | 0.0025647024 | 15.882215 | 7 |
| GAGCGGT | 85 | 0.0025647024 | 15.882215 | 6 |
| CCTTCGT | 115 | 6.770486E-5 | 15.654677 | 1 |
| AGTGGCG | 105 | 6.035357E-4 | 14.999869 | 10 |
| AGCGCTC | 135 | 1.5808833E-5 | 14.999868 | 7 |
| TCGTTGG | 140 | 2.2290293E-5 | 14.464159 | 4 |
| TGCCGAG | 95 | 0.0053750616 | 14.210402 | 23 |
| CGTTGGA | 145 | 3.103058E-5 | 13.965395 | 5 |
| CGCTCCA | 115 | 0.0012014831 | 13.695532 | 9 |