Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378724.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 596228 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 40 | 3.455898E-7 | 39.372948 | 44 |
| GTCGGTG | 25 | 0.002106836 | 35.998123 | 37 |
| TCTCGTA | 45 | 8.6941327E-7 | 34.998173 | 41 |
| AGAGCGG | 40 | 1.557184E-5 | 33.756733 | 5 |
| CCGGCTA | 55 | 1.12668204E-7 | 32.725567 | 16 |
| CTCGTAT | 50 | 1.9803101E-6 | 31.498356 | 42 |
| CCTTCGT | 65 | 1.3960744E-8 | 31.16529 | 1 |
| ATCTCGT | 55 | 4.162208E-6 | 28.634869 | 40 |
| TCGTATG | 55 | 4.162208E-6 | 28.634869 | 43 |
| GCGGTTC | 50 | 7.1511735E-5 | 27.000856 | 8 |
| GACCGTG | 50 | 7.155258E-5 | 26.99859 | 29 |
| AGACCGT | 50 | 7.155258E-5 | 26.99859 | 28 |
| CCGAGAC | 60 | 8.186225E-6 | 26.248629 | 25 |
| ATGCCGA | 65 | 1.52276825E-5 | 24.229506 | 22 |
| AGCGGTT | 60 | 2.4650487E-4 | 22.500713 | 7 |
| CGGCTAA | 80 | 2.9721177E-6 | 22.498827 | 17 |
| CCGTGTC | 60 | 2.4664486E-4 | 22.498825 | 31 |
| AAGAGCG | 65 | 4.2292365E-4 | 20.773375 | 4 |
| GAGCGGT | 65 | 4.2292365E-4 | 20.773375 | 6 |
| CGTGTCT | 65 | 4.236426E-4 | 20.768148 | 32 |