Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378656.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 923350 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TATCTCG | 85 | 0.0 | 37.059628 | 39 |
| ACCGCTT | 85 | 0.0 | 37.055614 | 30 |
| CGTATGC | 95 | 0.0 | 33.15502 | 44 |
| GACCGCT | 95 | 0.0 | 33.15502 | 29 |
| AGACCGC | 95 | 0.0 | 33.15502 | 28 |
| CTCGTAT | 105 | 0.0 | 32.14007 | 42 |
| CGGAAGA | 115 | 0.0 | 31.323685 | 1 |
| AGAGCGG | 115 | 0.0 | 31.316898 | 5 |
| AGCGGTT | 115 | 0.0 | 31.301634 | 7 |
| TCTCGTA | 110 | 0.0 | 28.633883 | 41 |
| GAGCGGT | 130 | 0.0 | 27.703413 | 6 |
| GCGGTTC | 130 | 0.0 | 27.689909 | 8 |
| AATGCCG | 145 | 0.0 | 26.377026 | 21 |
| GAGACCG | 120 | 0.0 | 26.247725 | 27 |
| TCGTATG | 135 | 0.0 | 24.997833 | 43 |
| CCGCTTG | 130 | 1.8189894E-12 | 24.228672 | 31 |
| ATGCCGA | 150 | 0.0 | 23.997921 | 22 |
| TGCCGAG | 150 | 0.0 | 23.997921 | 23 |
| CCGAGAC | 135 | 3.6379788E-12 | 23.331312 | 25 |
| CGGTTCA | 160 | 0.0 | 22.498049 | 9 |