Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390593.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 321225 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 30 | 0.0051447605 | 29.996471 | 41 |
| TATCTCG | 40 | 6.1606325E-4 | 28.121693 | 39 |
| GTATATC | 90 | 1.862075E-4 | 17.497942 | 36 |
| ACTACAC | 95 | 0.005369053 | 14.208856 | 19 |
| GAGCCAC | 225 | 1.0230524E-6 | 12.007935 | 4 |
| ATCCACT | 200 | 4.9561255E-5 | 11.248676 | 8 |
| GAATATC | 145 | 0.0067731165 | 10.869251 | 4 |
| TATCTTC | 275 | 9.799151E-7 | 10.643397 | 4 |
| ATATCTT | 275 | 1.1322989E-5 | 9.824674 | 3 |
| TATCCAC | 210 | 9.679596E-4 | 9.641723 | 7 |
| CCACTTG | 235 | 2.5358718E-4 | 9.573342 | 10 |
| AGTGAGC | 245 | 3.8518436E-4 | 9.182592 | 43 |
| ATCTTCA | 235 | 0.0026780295 | 8.62272 | 5 |
| CACTCCA | 250 | 0.004715691 | 8.099048 | 17 |
| TGAGCCA | 315 | 5.273442E-4 | 7.862338 | 3 |
| AAATATC | 500 | 5.2326504E-7 | 7.6634154 | 1 |
| TCCACTT | 325 | 7.4294576E-4 | 7.6144886 | 9 |
| AATATCC | 305 | 0.0033397747 | 7.381927 | 5 |
| AGAAACT | 310 | 0.003944153 | 7.2572103 | 38 |