Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390754.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 734270 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGATCGG | 75 | 4.7293724E-11 | 32.989014 | 17 |
| GATCGGA | 80 | 1.0004442E-10 | 30.9272 | 18 |
| GGCGGTG | 30 | 0.0051561627 | 29.98797 | 37 |
| ATCGGAA | 90 | 3.965397E-10 | 27.490845 | 19 |
| CGCCCGC | 50 | 7.042504E-5 | 27.06289 | 1 |
| CGTATGC | 45 | 0.0012290032 | 24.989973 | 44 |
| CTCGTAT | 45 | 0.0012290032 | 24.989973 | 42 |
| CCGTGTC | 60 | 2.473035E-4 | 22.490978 | 31 |
| CGTGAGC | 105 | 5.9519152E-8 | 21.478481 | 1 |
| CGCCCGG | 65 | 4.2457535E-4 | 20.762316 | 13 |
| TCGGAAG | 120 | 1.108674E-8 | 20.61673 | 20 |
| CCGAGAC | 120 | 1.108674E-8 | 20.61673 | 45 |
| AAATCGC | 55 | 0.00388099 | 20.503588 | 5 |
| GACCGTG | 55 | 0.003944356 | 20.446342 | 29 |
| TCTCGTA | 55 | 0.003944356 | 20.446342 | 41 |
| CGAGATC | 115 | 1.5989826E-7 | 19.558702 | 15 |
| TTCGTTG | 140 | 2.9940566E-9 | 19.330635 | 3 |
| CGTTGGA | 155 | 5.16593E-10 | 18.916214 | 5 |
| AGACCGT | 60 | 0.0065208296 | 18.74376 | 28 |
| TCGTATG | 60 | 0.006523394 | 18.742481 | 43 |