Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378641.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 899060 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA | 3151 | 0.35047716503904075 | No Hit |
| TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA | 2208 | 0.24558983827553224 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TAAGCCG | 380 | 0.0 | 42.627415 | 13 |
| GATGACG | 395 | 0.0 | 41.008656 | 19 |
| TTCGGTA | 305 | 0.0 | 40.56981 | 22 |
| CGTCATA | 400 | 0.0 | 40.4983 | 24 |
| AAGCCGA | 405 | 0.0 | 39.996094 | 14 |
| ATGACGT | 420 | 0.0 | 39.638985 | 20 |
| TGACGTC | 415 | 0.0 | 39.57445 | 21 |
| ACGTCAT | 415 | 0.0 | 39.57445 | 23 |
| GCCGATG | 410 | 0.0 | 39.50834 | 16 |
| GAATTCG | 315 | 0.0 | 39.28188 | 19 |
| CGATGAC | 420 | 0.0 | 39.103325 | 18 |
| GACGTCA | 415 | 0.0 | 39.032333 | 22 |
| TCGGTAT | 320 | 0.0 | 38.668102 | 23 |
| CCGATGA | 435 | 0.0 | 38.272125 | 17 |
| GCGGTCT | 330 | 0.0 | 38.180214 | 36 |
| AATTCGG | 330 | 0.0 | 38.17809 | 20 |
| AGCCGAT | 425 | 0.0 | 38.113926 | 15 |
| ATTCGGT | 335 | 0.0 | 37.60827 | 21 |
| AGGCGGT | 345 | 0.0 | 35.86806 | 34 |
| CGGTATT | 345 | 0.0 | 35.86806 | 24 |