Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378739.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 764959 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGGTAG | 55 | 6.002665E-11 | 40.907013 | 31 |
| CTCGTAT | 70 | 0.0 | 38.569466 | 42 |
| CGGTAGC | 65 | 9.094947E-12 | 38.07748 | 32 |
| GACCGGT | 80 | 3.6379788E-12 | 33.75049 | 29 |
| AGACCGG | 75 | 4.7293724E-11 | 33.00048 | 28 |
| GCGGTTC | 90 | 1.2732926E-11 | 29.998476 | 8 |
| ACCGGTA | 85 | 2.0372681E-10 | 29.118069 | 30 |
| GAGCGGT | 95 | 2.3646862E-11 | 28.425184 | 6 |
| GAGACCG | 95 | 2.3646862E-11 | 28.421465 | 27 |
| CGTATGC | 95 | 2.3646862E-11 | 28.419607 | 44 |
| TCTCGTA | 95 | 2.3646862E-11 | 28.419607 | 41 |
| TCGTATG | 95 | 2.3646862E-11 | 28.419607 | 43 |
| CGGTTCA | 100 | 4.5474735E-11 | 26.998627 | 9 |
| CCGAGAC | 95 | 7.403287E-10 | 26.05301 | 25 |
| ATCTCGT | 105 | 8.54925E-11 | 25.712978 | 40 |
| AGCGGTT | 105 | 8.54925E-11 | 25.712978 | 7 |
| CGGAAGA | 110 | 1.5097612E-10 | 24.550625 | 1 |
| TGCCGAG | 110 | 1.5097612E-10 | 24.544207 | 23 |
| AGAGCGG | 115 | 2.6375346E-10 | 23.481672 | 5 |
| AAGAGCG | 120 | 4.5110937E-10 | 22.50327 | 4 |