Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379240.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 681731 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 35 | 2.8182642E-4 | 32.144638 | 41 |
| CGTTTCG | 30 | 0.005142567 | 30.003864 | 1 |
| CTCGTAT | 30 | 0.0051444126 | 30.001661 | 42 |
| GAGCGGT | 45 | 0.0012261707 | 24.999552 | 6 |
| ACGCCCG | 50 | 0.002263907 | 22.499598 | 12 |
| ATGCCGA | 50 | 0.002263907 | 22.499598 | 22 |
| CACTGCG | 75 | 4.5997404E-5 | 20.999624 | 8 |
| AGACCGT | 60 | 0.0065085157 | 18.749664 | 28 |
| CACGCCC | 120 | 5.1677634E-6 | 16.874697 | 11 |
| ACCACGC | 165 | 2.3535904E-8 | 16.363344 | 9 |
| CCGGCTA | 130 | 1.1052611E-5 | 15.576643 | 16 |
| CGGCTAA | 130 | 1.1052611E-5 | 15.576643 | 17 |
| GGAAACG | 110 | 8.583193E-4 | 14.317925 | 9 |
| CGCCCGG | 110 | 8.583193E-4 | 14.317925 | 13 |
| CCACGCC | 175 | 8.15613E-7 | 14.142603 | 10 |
| CACCACG | 215 | 4.0612576E-8 | 13.604406 | 8 |
| GGCTAAT | 290 | 7.2759576E-11 | 13.18942 | 18 |
| CTTCGTT | 120 | 0.0016545136 | 13.125727 | 2 |
| TGAGCCG | 140 | 3.6014154E-4 | 12.857856 | 45 |
| CCTTCGT | 125 | 0.0022477172 | 12.601622 | 1 |