Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390741.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 836099 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGCGCCC | 25 | 0.0021080317 | 35.995644 | 11 |
| ACGGGAT | 75 | 4.609243E-5 | 20.994947 | 13 |
| GCCACCG | 80 | 7.4734475E-5 | 19.71696 | 6 |
| CCTTCGT | 105 | 1.4240577E-6 | 19.314573 | 1 |
| TCGCACC | 60 | 0.0064530917 | 18.778057 | 6 |
| GCGCCCG | 60 | 0.00651809 | 18.745491 | 12 |
| ATCTTCG | 135 | 4.195499E-8 | 18.360767 | 5 |
| CGCCCGG | 95 | 2.823377E-4 | 16.57496 | 13 |
| AGATCGC | 85 | 0.002539936 | 15.905167 | 3 |
| CTTCGTA | 115 | 6.785973E-5 | 15.65028 | 7 |
| CACGTGC | 90 | 0.0037156302 | 15.022446 | 1 |
| CGGGATT | 105 | 6.045446E-4 | 14.996391 | 14 |
| CCGGCTA | 125 | 1.3825645E-4 | 14.396537 | 16 |
| CGGCTAA | 110 | 8.6005405E-4 | 14.314737 | 17 |
| CCACCGC | 95 | 0.005378704 | 14.208808 | 7 |
| TCTTCGT | 160 | 4.945052E-6 | 14.083544 | 6 |
| TCGAACT | 145 | 3.1094023E-5 | 13.962158 | 29 |
| GCCGAGG | 195 | 1.8321771E-7 | 13.842823 | 44 |
| TCGTATA | 100 | 0.007554795 | 13.498367 | 9 |
| CTTCGTT | 135 | 2.6172493E-4 | 13.353285 | 2 |