Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390613.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 221715 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGCG | 25 | 3.8818544E-5 | 44.99752 | 29 |
| AGACCGC | 25 | 3.8818544E-5 | 44.99752 | 28 |
| CCGAGAC | 35 | 6.2278577E-6 | 38.5693 | 25 |
| CGTATGC | 30 | 1.1373214E-4 | 37.497932 | 44 |
| ACCGCGT | 30 | 1.1373214E-4 | 37.497932 | 30 |
| GAGACCG | 30 | 1.1373214E-4 | 37.497932 | 27 |
| CCGCGTA | 30 | 1.1373214E-4 | 37.497932 | 31 |
| CGCGTAG | 30 | 1.1373214E-4 | 37.497932 | 32 |
| CTCGTAT | 35 | 2.8139967E-4 | 32.141087 | 42 |
| CGTAGAA | 35 | 2.8139967E-4 | 32.141087 | 34 |
| TCTCGTA | 35 | 2.8139967E-4 | 32.141087 | 41 |
| TCGTATG | 35 | 2.8139967E-4 | 32.141087 | 43 |
| GCAGCCG | 30 | 0.0051397914 | 29.998346 | 43 |
| GCGTAGA | 40 | 6.152312E-4 | 28.123451 | 33 |
| ATCTCGT | 45 | 0.0012238268 | 24.998621 | 40 |
| AATGCCG | 45 | 0.0012238268 | 24.998621 | 21 |
| AAGAGCG | 50 | 0.0022566551 | 22.503836 | 4 |
| GAGCGGT | 50 | 0.002259616 | 22.49876 | 6 |
| ATGCCGA | 50 | 0.002259616 | 22.49876 | 22 |
| CGGAAGA | 65 | 4.180114E-4 | 20.800924 | 1 |