Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379269.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 621606 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGACTA | 30 | 2.164019E-6 | 44.9996 | 31 |
| ATGCCGA | 50 | 4.8732545E-8 | 35.99968 | 22 |
| AGAGCGG | 45 | 8.6919863E-7 | 34.999687 | 5 |
| CGACTAA | 40 | 1.5595144E-5 | 33.749695 | 32 |
| AGTCCGG | 30 | 0.0051456857 | 29.999733 | 20 |
| TCGTATG | 45 | 3.4885063E-5 | 29.999731 | 43 |
| GACCGAC | 55 | 4.161182E-6 | 28.636108 | 29 |
| CTCGTAT | 40 | 6.1632565E-4 | 28.124746 | 42 |
| TCTCGTA | 40 | 6.1632565E-4 | 28.124746 | 41 |
| GAGCGGT | 65 | 4.8677066E-7 | 27.69206 | 6 |
| ACGCCCG | 60 | 8.184206E-6 | 26.249767 | 12 |
| GCGGTTC | 60 | 8.184206E-6 | 26.249767 | 8 |
| AGCGGTT | 60 | 8.184206E-6 | 26.249767 | 7 |
| AAGAGCG | 70 | 9.2902155E-7 | 25.716125 | 4 |
| TGCCGAG | 80 | 1.052249E-7 | 25.312273 | 23 |
| ACCGACT | 55 | 1.3672985E-4 | 24.545237 | 30 |
| CCGAGAC | 55 | 1.3672985E-4 | 24.545237 | 25 |
| CGGAAGA | 65 | 1.5204983E-5 | 24.234451 | 1 |
| GAGACCG | 60 | 2.4658898E-4 | 22.4998 | 27 |
| AATGCCG | 70 | 2.7006008E-5 | 22.499798 | 21 |