Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390621.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 226873 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTTGGA | 30 | 1.13326845E-4 | 37.521137 | 5 |
| CTTCGTA | 40 | 1.5561152E-5 | 33.746696 | 7 |
| TCGTATA | 40 | 1.5561152E-5 | 33.746696 | 9 |
| GGAAACG | 35 | 2.8149103E-4 | 32.139706 | 9 |
| CCTTCGT | 30 | 0.005096926 | 30.050049 | 1 |
| CTTCGTT | 30 | 0.00512451 | 30.016909 | 2 |
| TTCGTTG | 30 | 0.00512451 | 30.016909 | 3 |
| CGTATAA | 45 | 3.4809615E-5 | 29.99706 | 10 |
| GAAACGG | 40 | 6.1542983E-4 | 28.122246 | 10 |
| TTCGTAT | 50 | 7.138287E-5 | 26.997355 | 8 |
| ATCTTCG | 60 | 2.4496828E-4 | 22.512682 | 5 |
| TCTTCGT | 60 | 2.4606808E-4 | 22.497797 | 6 |
| AAACGGG | 50 | 0.00226034 | 22.497795 | 11 |
| GGTAGGT | 55 | 0.003929183 | 20.452541 | 33 |
| ACTAGAC | 105 | 1.4364941E-6 | 19.283825 | 19 |
| ATATCTT | 160 | 2.9137664E-7 | 15.4774685 | 3 |
| TATCTTC | 165 | 4.13027E-7 | 15.008454 | 4 |
| AATATCT | 175 | 8.034185E-7 | 14.150828 | 2 |
| AACTAGA | 150 | 4.244905E-5 | 13.498678 | 18 |
| TCTACTA | 100 | 0.00753138 | 13.498677 | 6 |