Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390663.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 920615 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCGGA | 70 | 2.8927388E-8 | 28.920433 | 18 |
| ATCGGAA | 80 | 1.056178E-7 | 25.305382 | 19 |
| TCGGAAG | 85 | 1.8979517E-7 | 23.81683 | 20 |
| AGATCGG | 90 | 3.29439E-7 | 22.493671 | 17 |
| ACGCCCG | 60 | 2.4726012E-4 | 22.49245 | 12 |
| AGACCGT | 60 | 0.0065180697 | 18.745745 | 28 |
| CCGTAAG | 60 | 0.006520114 | 18.744726 | 31 |
| ACCGTAA | 60 | 0.006520114 | 18.744726 | 30 |
| AAAGCGC | 120 | 5.0810922E-6 | 16.906067 | 5 |
| GCGCAAT | 80 | 0.0017143403 | 16.869339 | 14 |
| CCGGCTA | 150 | 1.4272518E-7 | 16.494463 | 16 |
| GCGGTTC | 110 | 4.644919E-5 | 16.359922 | 28 |
| CGGCTAA | 170 | 3.414607E-8 | 15.877886 | 17 |
| CGCTTTG | 85 | 0.0025703935 | 15.877023 | 45 |
| TCGTTGG | 205 | 1.2860255E-9 | 15.390791 | 4 |
| CTTCGTT | 150 | 2.527724E-6 | 15.025161 | 2 |
| AGCGGTT | 120 | 9.767674E-5 | 14.996595 | 27 |
| AGAGCGG | 120 | 9.767674E-5 | 14.996595 | 25 |
| ACCTCCG | 105 | 6.048136E-4 | 14.995782 | 35 |
| CTCGTAT | 90 | 0.0037615532 | 14.9949665 | 42 |