Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390660.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1016815 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGTAAT | 30 | 0.005155103 | 29.99033 | 31 |
| GAAACGC | 50 | 0.0022667334 | 22.496065 | 9 |
| ATCGGAA | 50 | 0.0022680294 | 22.493853 | 19 |
| ACCGCGC | 75 | 4.608165E-5 | 20.99633 | 9 |
| GATCGGA | 55 | 0.003942464 | 20.448957 | 18 |
| CACCGCG | 80 | 7.572069E-5 | 19.684057 | 8 |
| TCGTATA | 85 | 1.2058826E-4 | 18.526173 | 9 |
| CTTCGTA | 120 | 5.1805328E-6 | 16.87205 | 7 |
| CCGCGCC | 80 | 0.001712664 | 16.87205 | 10 |
| CGTGAGC | 190 | 4.3655746E-10 | 16.61036 | 1 |
| ACTAGAC | 445 | 0.0 | 15.669875 | 19 |
| TTCGTAT | 130 | 1.1079746E-5 | 15.574199 | 8 |
| CCACCGC | 175 | 4.8714355E-8 | 15.425874 | 7 |
| CGCACCA | 90 | 0.003706548 | 15.02842 | 3 |
| ACGCCCA | 95 | 0.0053869565 | 14.205946 | 12 |
| CGTATAA | 115 | 0.0012031979 | 13.693257 | 10 |
| GCCACCG | 165 | 6.7668043E-6 | 13.663547 | 6 |
| CGCCTCT | 100 | 0.0074562775 | 13.525578 | 1 |
| CTAGACA | 725 | 0.0 | 13.340526 | 20 |
| TAGACAG | 755 | 0.0 | 12.810438 | 21 |