Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390696.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 786142 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AACGGGT | 50 | 0.0022681288 | 22.492908 | 12 |
| GATCGGA | 150 | 1.4551915E-11 | 20.994715 | 18 |
| GACCGTT | 55 | 0.0039426396 | 20.4481 | 44 |
| CCGAGAC | 200 | 0.0 | 20.243618 | 45 |
| ATCGGAA | 160 | 3.8198777E-11 | 19.682547 | 19 |
| TCGGAAG | 160 | 3.8198777E-11 | 19.681295 | 20 |
| GTTCGAG | 60 | 0.0065205633 | 18.74409 | 31 |
| TCGTATA | 110 | 2.252702E-6 | 18.410315 | 9 |
| ATCTTCG | 145 | 9.447467E-8 | 17.101656 | 5 |
| CGTATAA | 110 | 4.6318768E-5 | 16.364723 | 10 |
| TGCCCGG | 125 | 7.638248E-6 | 16.195925 | 13 |
| CTCCGCC | 125 | 7.642864E-6 | 16.194895 | 37 |
| CTTCGTA | 140 | 1.2525925E-6 | 16.072496 | 7 |
| TCTTCGT | 155 | 2.0191692E-7 | 15.998324 | 6 |
| CGAGATC | 225 | 1.8189894E-11 | 15.995975 | 15 |
| ATCCGCC | 85 | 0.002538134 | 15.906688 | 3 |
| TGTAGAC | 85 | 0.0025695963 | 15.877348 | 32 |
| AGATCGG | 200 | 9.295036E-10 | 15.7460375 | 17 |
| GATCCGC | 90 | 0.0037144823 | 15.022983 | 2 |
| CCGAGAT | 240 | 5.0931703E-11 | 14.996226 | 14 |