Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390676.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 839238 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGTATG | 50 | 1.9862073E-6 | 31.488947 | 43 |
| ACCGCTC | 40 | 6.175259E-4 | 28.116808 | 30 |
| CCGCTCT | 45 | 0.0012283634 | 24.992718 | 31 |
| CGCTCTA | 45 | 0.0012283634 | 24.992718 | 32 |
| CGTATGC | 45 | 0.0012287901 | 24.991228 | 44 |
| AGATCGG | 75 | 1.7010425E-6 | 23.993008 | 17 |
| GATCGGA | 80 | 2.980696E-6 | 22.493446 | 18 |
| AGACCGC | 60 | 2.4716073E-4 | 22.493444 | 28 |
| GGCGGTG | 50 | 0.0022679407 | 22.493444 | 31 |
| CTCGTAT | 50 | 0.0022687262 | 22.492104 | 42 |
| CGGGATG | 50 | 0.0022687262 | 22.492104 | 23 |
| ATCGGAA | 85 | 5.042246E-6 | 21.170301 | 19 |
| CCGAGAC | 85 | 5.044849E-6 | 21.16904 | 45 |
| GACCGCT | 55 | 0.0039423117 | 20.448587 | 29 |
| GAGACCG | 55 | 0.0039423117 | 20.448587 | 27 |
| TCGGAAG | 100 | 9.0794674E-7 | 20.242893 | 20 |
| CCGCGCC | 60 | 0.0064396863 | 18.784832 | 3 |
| TCTCGTA | 60 | 0.006522265 | 18.743422 | 41 |
| CCGGCTA | 105 | 3.118593E-5 | 17.137863 | 16 |
| CGGCTAA | 120 | 9.7713935E-5 | 14.99563 | 17 |