Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390770.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 462174 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGAACTA | 20 | 6.953013E-4 | 45.09925 | 1 |
| TAGACGA | 40 | 3.462992E-7 | 39.35938 | 34 |
| AGACGAT | 40 | 3.462992E-7 | 39.35938 | 35 |
| CCGTAGA | 40 | 3.462992E-7 | 39.35938 | 31 |
| CGTAGAC | 40 | 3.462992E-7 | 39.35938 | 32 |
| GACGATC | 40 | 3.462992E-7 | 39.35938 | 36 |
| ACGCCCG | 25 | 0.002109913 | 35.985718 | 12 |
| CTCGTAT | 45 | 8.711959E-7 | 34.986115 | 42 |
| TCTCGTA | 45 | 8.711959E-7 | 34.986115 | 41 |
| GAGACCG | 40 | 1.5627951E-5 | 33.73661 | 27 |
| CGTATGC | 50 | 1.9843646E-6 | 31.487503 | 44 |
| GTAGACG | 50 | 1.9843646E-6 | 31.487503 | 33 |
| TCGTATG | 50 | 1.9843646E-6 | 31.487503 | 43 |
| AGACCGT | 60 | 2.4220935E-7 | 29.9881 | 28 |
| GACCGTA | 55 | 4.170717E-6 | 28.625004 | 29 |
| CGCCCGG | 50 | 7.168632E-5 | 26.989288 | 13 |
| ATCTCGT | 65 | 1.5258716E-5 | 24.221159 | 40 |
| ACCGTAG | 65 | 1.5258716E-5 | 24.221159 | 30 |
| CACGCCC | 50 | 0.002263525 | 22.498377 | 11 |
| ACGATCT | 70 | 2.7067608E-5 | 22.491076 | 37 |