Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390697.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 811837 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGTGCGG | 30 | 0.0051099258 | 30.04364 | 5 |
| CTCGTAT | 75 | 1.7062121E-9 | 29.99368 | 42 |
| CCGTATT | 75 | 1.7062121E-9 | 29.99368 | 31 |
| TCTCGTA | 80 | 3.3978722E-9 | 28.120804 | 41 |
| GACCGTA | 80 | 3.3996912E-9 | 28.119072 | 29 |
| TCGTATG | 80 | 3.4015102E-9 | 28.11734 | 43 |
| ATCTCGT | 90 | 1.1918019E-8 | 24.99627 | 40 |
| AGACCGT | 100 | 1.3478711E-9 | 24.744783 | 28 |
| CGTATTG | 95 | 2.1182132E-8 | 23.679218 | 32 |
| ACCGTAT | 95 | 2.1182132E-8 | 23.679218 | 30 |
| GAGACCG | 105 | 2.3701432E-9 | 23.56646 | 27 |
| CCACGCC | 140 | 5.456968E-12 | 22.496643 | 10 |
| ACCACGC | 145 | 9.094947E-12 | 21.720898 | 9 |
| CGTATGC | 105 | 6.119808E-8 | 21.422735 | 44 |
| GATCGGA | 75 | 4.6079716E-5 | 20.995575 | 18 |
| TCGCCAA | 55 | 0.0039403653 | 20.450233 | 16 |
| CGCCCGG | 90 | 8.261386E-6 | 19.995783 | 13 |
| CATCTCG | 115 | 1.5963997E-7 | 19.562298 | 39 |
| GCGCAAT | 60 | 0.006516813 | 18.746048 | 14 |
| GCGCCCG | 60 | 0.0065191304 | 18.744894 | 12 |