Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379028.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 983967 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGACCGC | 50 | 4.879803E-8 | 35.99829 | 28 |
| TCTCGTA | 65 | 1.4037141E-8 | 31.152367 | 41 |
| ATGCCGA | 60 | 2.4193832E-7 | 29.998577 | 22 |
| CAACGAT | 40 | 6.167218E-4 | 28.123667 | 36 |
| CTCGTAT | 75 | 5.6399585E-8 | 26.99872 | 42 |
| GACCGCA | 75 | 5.6399585E-8 | 26.99872 | 29 |
| CGTATGC | 70 | 9.309115E-7 | 25.713066 | 44 |
| CGGTTCA | 80 | 1.05395884E-7 | 25.3113 | 9 |
| GCGGCGC | 45 | 0.0012267681 | 24.998816 | 34 |
| ACCGCAA | 75 | 1.6979338E-6 | 23.998861 | 30 |
| AATGCCG | 75 | 1.6979338E-6 | 23.998861 | 21 |
| TCGTATG | 85 | 1.8939318E-7 | 23.8224 | 43 |
| CCGAGAC | 95 | 2.1156666E-8 | 23.683086 | 25 |
| GCGGTTC | 80 | 2.9726325E-6 | 22.501219 | 8 |
| GAGACCG | 80 | 2.9752573E-6 | 22.498934 | 27 |
| AATCTCG | 60 | 2.4679507E-4 | 22.498932 | 18 |
| TGCCGAG | 85 | 5.03306E-6 | 21.175467 | 23 |
| GGCGCAA | 55 | 0.0039372225 | 20.453575 | 13 |
| CGGAAGA | 100 | 9.0254434E-7 | 20.256245 | 1 |
| AGAGCGG | 90 | 8.234541E-6 | 20.004135 | 5 |