Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379030.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1567556 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGGAT | 35 | 2.8220506E-4 | 32.140514 | 30 |
| TCGCGCA | 30 | 0.005140032 | 30.009295 | 6 |
| GCGGTTC | 60 | 2.4676867E-4 | 22.50051 | 8 |
| CGGATGC | 60 | 2.4692854E-4 | 22.498358 | 32 |
| TCTCGTA | 50 | 0.0022659358 | 22.498358 | 41 |
| TAATTCG | 65 | 4.241267E-4 | 20.767715 | 35 |
| GACCGGA | 55 | 0.0039388337 | 20.45305 | 29 |
| AGACCGG | 55 | 0.0039388337 | 20.45305 | 28 |
| CCGGATG | 60 | 0.006514276 | 18.74863 | 31 |
| GGGCGAC | 120 | 5.179121E-6 | 16.873768 | 28 |
| AGCGGTT | 95 | 2.8196877E-4 | 16.579325 | 7 |
| GAGCGGT | 90 | 0.003747001 | 15.004648 | 6 |
| CGTATGC | 90 | 0.0037565564 | 14.998904 | 44 |
| GGCGACA | 135 | 1.5833735E-5 | 14.998904 | 29 |
| CCGAGAC | 95 | 0.0053797723 | 14.209489 | 25 |
| CGCCACT | 160 | 5.0327653E-6 | 14.061474 | 9 |
| GCGACAG | 145 | 3.1079104E-5 | 13.964498 | 30 |
| GAGACCG | 100 | 0.007556274 | 13.499014 | 27 |
| AACGCAC | 125 | 0.0022533855 | 12.59908 | 11 |
| CGTGAGC | 195 | 3.827182E-5 | 11.543879 | 1 |