Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379277.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 482609 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGCGGTT | 30 | 1.1390023E-4 | 37.499653 | 7 |
| CGGAAGA | 35 | 2.8146963E-4 | 32.149223 | 1 |
| CTCGTAT | 35 | 2.8181216E-4 | 32.14256 | 42 |
| GACCGCA | 35 | 2.8181216E-4 | 32.14256 | 29 |
| AATGCCG | 35 | 2.8181216E-4 | 32.14256 | 21 |
| CGGTTCA | 40 | 6.16125E-4 | 28.124743 | 9 |
| TCTCGTA | 40 | 6.16125E-4 | 28.124743 | 41 |
| AGACCGC | 40 | 6.16125E-4 | 28.124743 | 28 |
| TCGTATG | 40 | 6.16125E-4 | 28.124743 | 43 |
| ATCTCGT | 45 | 0.0012255895 | 24.99977 | 40 |
| GCGGTTC | 45 | 0.0012255895 | 24.99977 | 8 |
| GAGCGGT | 45 | 0.0012255895 | 24.99977 | 6 |
| CCGAGAC | 45 | 0.0012255895 | 24.99977 | 25 |
| CCGCAAG | 45 | 0.0012255895 | 24.99977 | 31 |
| AGAGCGG | 45 | 0.0012255895 | 24.99977 | 5 |
| TGCCGAG | 55 | 1.3666824E-4 | 24.545229 | 23 |
| CGTATGC | 50 | 0.0022628417 | 22.499794 | 44 |
| CGCAAGA | 50 | 0.0022628417 | 22.499794 | 32 |
| ACCGCAA | 65 | 4.2335867E-4 | 20.76904 | 30 |
| ATGCCGA | 55 | 0.0039334903 | 20.454357 | 22 |