Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390677.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1007268 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 85 | 0.0 | 37.0466 | 44 |
| TCGTATG | 85 | 0.0 | 37.0466 | 43 |
| CCGTTGT | 100 | 0.0 | 33.740543 | 31 |
| TCTCGTA | 100 | 0.0 | 31.48961 | 41 |
| GATCGGA | 175 | 0.0 | 29.567547 | 18 |
| CTCGTAT | 110 | 0.0 | 28.626917 | 42 |
| ACCGTTG | 115 | 0.0 | 27.383629 | 30 |
| AGATCGG | 190 | 0.0 | 27.233267 | 17 |
| GACCGTT | 120 | 0.0 | 26.242645 | 29 |
| TCGGAAG | 200 | 0.0 | 25.866467 | 20 |
| ATCTCGT | 125 | 1.8189894E-12 | 25.19419 | 40 |
| CGTTGTA | 135 | 0.0 | 24.992994 | 32 |
| ACGCCCG | 45 | 0.0012288102 | 24.991755 | 12 |
| ATCGGAA | 215 | 0.0 | 24.066607 | 19 |
| AGAGCGG | 235 | 0.0 | 22.015106 | 25 |
| CATCTCG | 145 | 9.094947E-12 | 21.71913 | 39 |
| GAGACCG | 145 | 9.094947E-12 | 21.71913 | 27 |
| AGACCGT | 145 | 9.094947E-12 | 21.71913 | 28 |
| GCGGTTC | 245 | 0.0 | 21.117579 | 28 |
| CCGAGAC | 245 | 0.0 | 21.115482 | 45 |