Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390668.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 973126 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCGGA | 65 | 4.884132E-7 | 27.684498 | 18 |
| CGTATGC | 55 | 1.3710913E-4 | 24.537271 | 44 |
| ATCGGAA | 85 | 1.8981882E-7 | 23.816809 | 19 |
| TCGGAAG | 85 | 1.8991341E-7 | 23.815586 | 20 |
| GACCGAA | 50 | 0.0022687535 | 22.4925 | 29 |
| TCTCGTA | 50 | 0.0022687535 | 22.4925 | 41 |
| AGATCGG | 85 | 5.043208E-6 | 21.170496 | 17 |
| TCGTATA | 65 | 4.2412456E-4 | 20.766575 | 9 |
| CCGAAGA | 55 | 0.003943719 | 20.447725 | 31 |
| TCTTCGT | 90 | 8.1054295E-6 | 20.040699 | 6 |
| CGGCTGA | 80 | 7.450127E-5 | 19.72553 | 1 |
| ATCTTCG | 95 | 1.29263135E-5 | 18.985924 | 5 |
| TGGGCGA | 95 | 1.3192808E-5 | 18.94105 | 27 |
| TCGTATG | 60 | 0.006522338 | 18.743748 | 43 |
| GGGCGAC | 85 | 1.2072827E-4 | 18.523233 | 28 |
| GGCGACA | 85 | 1.2072827E-4 | 18.523233 | 29 |
| TTCGTAT | 100 | 2.0483623E-5 | 17.997698 | 8 |
| CCGAGAT | 125 | 3.843088E-7 | 17.994923 | 14 |
| GCGGTTC | 100 | 2.051988E-5 | 17.994 | 28 |
| CTTCGTA | 90 | 1.8671315E-4 | 17.49776 | 7 |