Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379281.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 503474 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTTAGA | 20 | 7.0168247E-4 | 45.01649 | 1 |
| AGCGGTT | 55 | 6.002665E-11 | 40.907825 | 7 |
| GAGACCG | 50 | 1.0786607E-9 | 40.49875 | 27 |
| GCGGTTC | 60 | 1.546141E-10 | 37.49884 | 8 |
| GACCGTT | 55 | 2.743036E-9 | 36.817043 | 29 |
| CCGAGAC | 55 | 2.743036E-9 | 36.817043 | 25 |
| AATGCCG | 50 | 4.87089E-8 | 35.998886 | 21 |
| ATGCCGA | 50 | 4.87089E-8 | 35.998886 | 22 |
| CGTATGC | 60 | 6.4192136E-9 | 33.74896 | 44 |
| GAGCGGT | 60 | 6.4192136E-9 | 33.74896 | 6 |
| AGACCGT | 60 | 6.4192136E-9 | 33.74896 | 28 |
| ACCGTTG | 60 | 6.4192136E-9 | 33.74896 | 30 |
| TCTCGTA | 65 | 1.4006218E-8 | 31.152884 | 41 |
| TCGTATG | 65 | 1.4006218E-8 | 31.152884 | 43 |
| AAGAGCG | 70 | 2.8720024E-8 | 28.936298 | 4 |
| AGAGCGG | 70 | 2.8774593E-8 | 28.93055 | 5 |
| ATCTCGT | 70 | 2.8803697E-8 | 28.927677 | 40 |
| CTCGTAT | 70 | 2.8803697E-8 | 28.927677 | 42 |
| CCGTTGG | 70 | 2.8803697E-8 | 28.927677 | 31 |
| CGGTTCA | 80 | 1.0516487E-7 | 25.311718 | 9 |