Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379039.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1063597 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 60 | 1.5643309E-10 | 37.499138 | 44 |
| CCGGCAA | 50 | 4.879439E-8 | 35.999176 | 31 |
| GCGGTTC | 60 | 6.4301275E-9 | 33.75081 | 8 |
| CTCGTAT | 65 | 1.4037141E-8 | 31.153131 | 42 |
| GAGCGGT | 70 | 2.8838258E-8 | 28.930626 | 6 |
| AGCGGTT | 75 | 5.637048E-8 | 27.000648 | 7 |
| AGACCGG | 70 | 9.3083145E-7 | 25.713696 | 28 |
| TCTCGTA | 80 | 1.0538679E-7 | 25.311916 | 41 |
| ACCGGCA | 75 | 1.6977883E-6 | 23.999449 | 30 |
| GACCGGC | 75 | 1.6977883E-6 | 23.999449 | 29 |
| AGAGCGG | 90 | 3.2842217E-7 | 22.501598 | 5 |
| CGGTTCA | 90 | 3.2871867E-7 | 22.499483 | 9 |
| CGGAAGA | 95 | 5.522161E-7 | 21.319307 | 1 |
| ATCTCGT | 95 | 5.532147E-7 | 21.315298 | 40 |
| CGGCAAG | 85 | 5.0326253E-6 | 21.175983 | 32 |
| GAGACCG | 85 | 5.0326253E-6 | 21.175983 | 27 |
| AATGCCG | 105 | 1.44568E-6 | 19.28527 | 21 |
| TCGTATG | 105 | 1.44568E-6 | 19.28527 | 43 |
| ATGCCGA | 110 | 2.2561526E-6 | 18.408669 | 22 |
| CCGAGAC | 115 | 3.4489312E-6 | 17.60829 | 25 |