Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378764.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 672059 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGAT | 50 | 4.8754373E-8 | 35.99863 | 29 |
| CTCGTAT | 50 | 1.9805866E-6 | 31.498802 | 42 |
| CCGATAC | 60 | 2.417255E-7 | 29.99886 | 31 |
| ACCGATA | 60 | 2.417255E-7 | 29.99886 | 30 |
| TCTCGTA | 55 | 4.1627864E-6 | 28.635275 | 41 |
| ATGCCGA | 55 | 4.1627864E-6 | 28.635275 | 22 |
| GCGGTTC | 65 | 4.866761E-7 | 27.693316 | 8 |
| AGACCGA | 65 | 4.869944E-7 | 27.691256 | 28 |
| CGATACA | 65 | 4.869944E-7 | 27.691256 | 32 |
| ATCTCGT | 70 | 9.300984E-7 | 25.71331 | 40 |
| AGAGCGG | 80 | 1.05053914E-7 | 25.317186 | 5 |
| CGGAAGA | 85 | 1.8864739E-7 | 23.829716 | 1 |
| AAGAGCG | 85 | 1.8878382E-7 | 23.827942 | 4 |
| GAGCGGT | 90 | 3.276873E-7 | 22.504168 | 6 |
| TCGTATG | 70 | 2.701629E-5 | 22.499146 | 43 |
| CGGTTCA | 80 | 2.972687E-6 | 22.499144 | 9 |
| CCGAGAC | 80 | 2.972687E-6 | 22.499144 | 25 |
| AGCGGTT | 85 | 5.025491E-6 | 21.177242 | 7 |
| GAGACCG | 75 | 4.600329E-5 | 20.9992 | 27 |
| TGCCGAG | 75 | 4.600329E-5 | 20.9992 | 23 |