Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390763.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 882878 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 40 | 1.5635233E-5 | 33.73938 | 42 |
| ATCTCGT | 60 | 8.208766E-6 | 26.24174 | 40 |
| TCTCGTA | 55 | 1.3707762E-4 | 24.537731 | 41 |
| GACCGTG | 60 | 2.471192E-4 | 22.494194 | 29 |
| CCTTCGT | 115 | 6.6429493E-9 | 21.555254 | 1 |
| TCGTATG | 75 | 4.6122484E-5 | 20.993395 | 43 |
| AGACCGT | 65 | 4.2445425E-4 | 20.763872 | 28 |
| CGTATGC | 70 | 6.996512E-4 | 19.279646 | 44 |
| ACACCCG | 60 | 0.006521163 | 18.7441 | 12 |
| TCGGAAG | 60 | 0.006521163 | 18.7441 | 20 |
| CCGCATG | 60 | 0.006521163 | 18.7441 | 43 |
| CCCGCCA | 75 | 0.0010988334 | 18.027008 | 3 |
| AGATCGG | 75 | 0.0011118692 | 17.995356 | 17 |
| CCGCCAC | 80 | 0.0016927032 | 16.901278 | 4 |
| CGTGTGA | 80 | 0.0017133768 | 16.870646 | 32 |
| GAGACCG | 85 | 0.0025689523 | 15.878254 | 27 |
| CGGGTTC | 120 | 9.750686E-5 | 14.999528 | 11 |
| AGCGGTT | 105 | 6.046722E-4 | 14.99613 | 27 |
| GATCGGA | 90 | 0.0037594512 | 14.996129 | 18 |
| CCGAGAC | 90 | 0.003760868 | 14.99528 | 25 |