Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379306.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 473893 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGGT | 40 | 6.8012014E-9 | 44.999687 | 29 |
| TCTCGTA | 45 | 1.9243089E-8 | 39.999718 | 41 |
| ACCGGTA | 50 | 4.868889E-8 | 35.999744 | 30 |
| GCGGTTC | 50 | 4.868889E-8 | 35.999744 | 8 |
| GAGACCG | 50 | 4.868889E-8 | 35.999744 | 27 |
| CGTATGC | 55 | 1.12540874E-7 | 32.727043 | 44 |
| AGCGGTT | 55 | 1.12540874E-7 | 32.727043 | 7 |
| GAGCGGT | 55 | 1.12540874E-7 | 32.727043 | 6 |
| AGACCGG | 55 | 1.12540874E-7 | 32.727043 | 28 |
| TCGTATG | 55 | 1.12540874E-7 | 32.727043 | 43 |
| CCGGTAT | 60 | 2.4140536E-7 | 29.999786 | 31 |
| CTCGTAT | 65 | 4.863505E-7 | 27.692112 | 42 |
| AAGAGCG | 65 | 4.863505E-7 | 27.692112 | 4 |
| CGGTATG | 65 | 4.863505E-7 | 27.692112 | 32 |
| ATGCCGA | 65 | 4.863505E-7 | 27.692112 | 22 |
| AGAGCGG | 65 | 4.863505E-7 | 27.692112 | 5 |
| TGCCGAG | 65 | 4.863505E-7 | 27.692112 | 23 |
| ATCTCGT | 70 | 9.2887785E-7 | 25.714106 | 40 |
| CGGTTCA | 80 | 2.9688163E-6 | 22.499844 | 9 |
| AATGCCG | 80 | 2.9688163E-6 | 22.499844 | 21 |