Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390594.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 576734 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGTCTT | 20 | 7.0343E-4 | 44.99488 | 33 |
| GACCGTA | 30 | 1.139979E-4 | 37.495735 | 29 |
| TATCTCG | 30 | 1.139979E-4 | 37.495735 | 39 |
| AGACCGT | 40 | 1.5604382E-5 | 33.746162 | 28 |
| CGTACAC | 35 | 2.8205264E-4 | 32.139206 | 32 |
| ACCGTAC | 35 | 2.8205264E-4 | 32.139206 | 30 |
| AGAGCGG | 40 | 6.147749E-4 | 28.136436 | 5 |
| AGCGGTT | 45 | 0.0012260065 | 24.999323 | 7 |
| ATCTCGT | 45 | 0.0012266266 | 24.997158 | 40 |
| CGTATGC | 45 | 0.0012266266 | 24.997158 | 44 |
| CCGTACA | 45 | 0.0012266266 | 24.997158 | 31 |
| GAGACCG | 55 | 1.3681033E-4 | 24.542665 | 27 |
| TCTCGTA | 50 | 0.0022647472 | 22.497442 | 41 |
| TCGTATG | 50 | 0.0022647472 | 22.497442 | 43 |
| GCGGTTC | 55 | 0.00393481 | 20.453995 | 8 |
| ACGCCCA | 70 | 6.974889E-4 | 19.286867 | 12 |
| CGGTTCA | 60 | 0.006507666 | 18.749495 | 9 |
| CTCGTAT | 60 | 0.0065109245 | 18.747868 | 42 |
| CGCCACC | 100 | 2.0366226E-5 | 18.007322 | 5 |
| CGTGAGC | 110 | 4.567183E-5 | 16.390198 | 1 |