Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379283.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 496762 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGGG | 45 | 0.0012256064 | 24.999887 | 29 |
| CCGCCAC | 80 | 2.9692328E-6 | 22.499899 | 4 |
| CCCGCCA | 95 | 1.3134273E-5 | 18.947283 | 3 |
| TCGTTGG | 80 | 0.0017090508 | 16.874924 | 4 |
| AAAGCGC | 80 | 0.0017090508 | 16.874924 | 5 |
| CGTTGGA | 85 | 0.002562493 | 15.882281 | 5 |
| GGAAACG | 125 | 1.3780082E-4 | 14.399936 | 9 |
| TTCGTTG | 100 | 0.0075433147 | 13.499939 | 3 |
| AAACGGG | 135 | 0.0040017436 | 11.6666155 | 11 |
| GAAACGG | 135 | 0.0040017436 | 11.6666155 | 10 |
| CAGCTAA | 200 | 4.963085E-5 | 11.249949 | 17 |
| CATGAGC | 175 | 0.0023304606 | 10.28774 | 1 |
| GCTAATT | 345 | 1.7164348E-7 | 9.782565 | 19 |
| AGAATTC | 265 | 8.202784E-5 | 9.3395815 | 43 |
| AGCTAAT | 205 | 0.008609168 | 8.780449 | 18 |
| GGGTTTC | 280 | 0.0014518515 | 8.037296 | 1 |
| CCAGCTA | 350 | 1.9372127E-4 | 7.7142515 | 16 |
| AGAGTGT | 325 | 7.441362E-4 | 7.6153507 | 42 |
| ACCACCA | 270 | 0.009407118 | 7.499967 | 6 |
| CTAATTT | 545 | 2.6758062E-7 | 7.4311595 | 20 |