Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379076.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 488073 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTACGA | 20 | 7.029607E-4 | 44.99959 | 34 |
| CCGCGTA | 20 | 7.029607E-4 | 44.99959 | 31 |
| GCGTACG | 20 | 7.029607E-4 | 44.99959 | 33 |
| CCGGGGG | 25 | 0.0021060172 | 35.999676 | 38 |
| CGTATGC | 25 | 0.0021060172 | 35.999676 | 44 |
| ACCGCGT | 25 | 0.0021060172 | 35.999676 | 30 |
| TACGATC | 25 | 0.0021060172 | 35.999676 | 36 |
| CGCGTAC | 25 | 0.0021060172 | 35.999676 | 32 |
| AGACCGC | 35 | 2.8181652E-4 | 32.142567 | 28 |
| CTCGTAT | 30 | 0.005144621 | 29.999727 | 42 |
| GCGGTTC | 30 | 0.005144621 | 29.999727 | 8 |
| GACCGCG | 30 | 0.005144621 | 29.999727 | 29 |
| TCTCGTA | 30 | 0.005144621 | 29.999727 | 41 |
| TCGTATG | 30 | 0.005144621 | 29.999727 | 43 |
| AGATCGT | 40 | 6.157655E-4 | 28.127626 | 3 |
| CGGTTCA | 40 | 6.1613467E-4 | 28.124744 | 9 |
| TCGTGCC | 40 | 6.1613467E-4 | 28.124744 | 6 |
| GAAAGCG | 55 | 0.0039335513 | 20.45436 | 4 |
| GAGACCG | 55 | 0.0039335513 | 20.45436 | 27 |
| AAAGCGC | 70 | 6.9760176E-4 | 19.28554 | 5 |