Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379315.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 487048 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGTA | 55 | 1.1258635E-7 | 32.725853 | 29 |
| CGTAGGT | 55 | 1.1258635E-7 | 32.725853 | 32 |
| AGAGCGG | 60 | 2.408542E-7 | 30.007944 | 5 |
| GCGGTTC | 60 | 2.415054E-7 | 29.998701 | 8 |
| CCGTAGG | 60 | 2.415054E-7 | 29.998701 | 31 |
| GAGACCG | 60 | 2.415054E-7 | 29.998701 | 27 |
| AGACCGT | 60 | 2.415054E-7 | 29.998701 | 28 |
| ACCGTAG | 60 | 2.415054E-7 | 29.998701 | 30 |
| CTCGTAT | 70 | 2.8801878E-8 | 28.927315 | 42 |
| GAGCGGT | 65 | 4.861158E-7 | 27.693949 | 6 |
| ATCTCGT | 65 | 4.865524E-7 | 27.691107 | 40 |
| CGTATGC | 65 | 4.865524E-7 | 27.691107 | 44 |
| CGGTTCA | 65 | 4.865524E-7 | 27.691107 | 9 |
| AGCGGTT | 65 | 4.865524E-7 | 27.691107 | 7 |
| AAGAGCG | 70 | 9.26766E-7 | 25.721092 | 4 |
| ATGCCGA | 70 | 9.2925984E-7 | 25.71317 | 22 |
| TCGTATG | 75 | 1.694938E-6 | 23.99896 | 43 |
| TCGATCT | 60 | 2.4654003E-4 | 22.499025 | 29 |
| CCGAGAC | 80 | 2.970035E-6 | 22.499025 | 25 |
| CTCGATC | 50 | 0.0022633201 | 22.499025 | 28 |