Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379301.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 776970 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTTGACG | 30 | 0.005148116 | 29.997768 | 20 |
| CGAGGCT | 60 | 0.006511437 | 18.748606 | 29 |
| ACCACGC | 185 | 2.2424554E-5 | 12.161259 | 9 |
| CCGGGAG | 175 | 1.8042732E-4 | 11.570567 | 25 |
| GCCCGGC | 140 | 0.005256454 | 11.249164 | 14 |
| CCCGGGA | 165 | 0.0014326657 | 10.908279 | 24 |
| CGTGAGC | 145 | 0.0067956406 | 10.867556 | 1 |
| ACCCGGG | 145 | 0.0068249693 | 10.861261 | 23 |
| AAGTACC | 205 | 7.7839696E-4 | 9.877314 | 11 |
| CACCACG | 235 | 2.545217E-4 | 9.573755 | 8 |
| GGAGTGC | 405 | 1.8175342E-8 | 9.446174 | 3 |
| CCACGCC | 220 | 0.0014851886 | 9.203861 | 10 |
| TCAAAGC | 250 | 4.7192327E-4 | 9.001648 | 3 |
| GAGCCAC | 350 | 2.1963824E-6 | 9.001068 | 4 |
| GCAAGCT | 205 | 0.008623183 | 8.779835 | 18 |
| GGCCGAG | 205 | 0.008623183 | 8.779835 | 14 |
| GCTAATT | 600 | 3.45608E-11 | 8.624358 | 19 |
| ACTAGAC | 305 | 3.7765483E-4 | 8.114151 | 19 |
| GGCTAAT | 365 | 3.620512E-5 | 8.013103 | 18 |
| GAGGCCG | 255 | 0.005650637 | 7.940586 | 12 |