Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379042.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 895059 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCAGCGG | 30 | 0.005146251 | 30.000484 | 39 |
| CGAGATT | 55 | 0.0039316807 | 20.458303 | 1 |
| ACGTTCC | 60 | 0.00650879 | 18.750303 | 25 |
| AGAGCGG | 85 | 0.0025633378 | 15.883496 | 5 |
| GCCACCG | 130 | 1.1050899E-5 | 15.578046 | 6 |
| CCCGCCA | 95 | 0.005368235 | 14.213139 | 3 |
| CCGGCTA | 95 | 0.0053761997 | 14.209963 | 16 |
| TCGAGAC | 115 | 0.0012007612 | 13.696638 | 4 |
| CGAGACC | 150 | 4.2655505E-5 | 13.500973 | 5 |
| GGTGGCG | 155 | 8.491953E-4 | 11.612442 | 8 |
| CACGCCC | 140 | 0.00525616 | 11.249553 | 11 |
| GTGGCGG | 140 | 0.00525616 | 11.249553 | 9 |
| CGTGAGC | 190 | 3.858547E-4 | 10.659854 | 1 |
| CCCGGCT | 185 | 0.0037055374 | 9.729343 | 15 |
| GCACTCC | 465 | 1.895387E-9 | 9.193184 | 16 |
| GGCTAAT | 325 | 8.406712E-6 | 8.999642 | 18 |
| ACCACGC | 205 | 0.0086228615 | 8.780139 | 9 |
| GTAGTCC | 270 | 0.0010175972 | 8.333002 | 22 |
| AGGTTGC | 360 | 3.0451694E-5 | 8.125132 | 36 |
| GGTTGCA | 335 | 1.1684305E-4 | 8.059832 | 37 |