Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379305.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 468285 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGAC | 30 | 1.13949354E-4 | 37.49662 | 29 |
| GCGGTTC | 50 | 7.1538845E-5 | 26.997564 | 8 |
| AGCGGTT | 50 | 7.1538845E-5 | 26.997564 | 7 |
| CTCGTAT | 45 | 0.0012245874 | 25.003086 | 42 |
| CGACATG | 45 | 0.0012261134 | 24.997746 | 32 |
| AGACCGA | 45 | 0.0012261134 | 24.997746 | 28 |
| GAGCGGT | 55 | 1.3663578E-4 | 24.545862 | 6 |
| CGGTTCA | 55 | 1.3673486E-4 | 24.543242 | 9 |
| ATCTCGT | 50 | 0.0022609986 | 22.502777 | 40 |
| CGTATGC | 50 | 0.0022609986 | 22.502777 | 44 |
| TCTCGTA | 50 | 0.0022609986 | 22.502777 | 41 |
| GAGACCG | 50 | 0.002263807 | 22.49797 | 27 |
| CCGACAT | 50 | 0.002263807 | 22.49797 | 31 |
| AGAGCGG | 65 | 4.2325887E-4 | 20.769577 | 5 |
| AATGCCG | 65 | 4.2356408E-4 | 20.767357 | 21 |
| ACCGACA | 55 | 0.0039351624 | 20.452702 | 30 |
| CGGAAGA | 70 | 6.9442065E-4 | 19.2984 | 1 |
| TCGTATG | 60 | 0.0065002344 | 18.752316 | 43 |
| AAGAGCG | 80 | 0.001708611 | 16.87528 | 4 |
| ATGCCGA | 80 | 0.0017098327 | 16.87348 | 22 |