Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378690.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1195384 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 130 | 0.0 | 34.611393 | 42 |
| TCGTATG | 135 | 0.0 | 33.32949 | 43 |
| GAGCGGT | 150 | 0.0 | 33.02244 | 6 |
| GACCGAT | 135 | 0.0 | 31.663017 | 29 |
| CGTATGC | 150 | 0.0 | 31.496368 | 44 |
| TCTCGTA | 150 | 0.0 | 29.996542 | 41 |
| GCGGTTC | 160 | 0.0 | 29.527845 | 8 |
| AGCGGTT | 165 | 0.0 | 28.633062 | 7 |
| CCGAGAC | 150 | 0.0 | 28.496716 | 25 |
| CCGATGC | 160 | 0.0 | 28.121758 | 31 |
| TATCTCG | 160 | 0.0 | 28.121758 | 39 |
| ATCTCGT | 170 | 0.0 | 27.790915 | 40 |
| CGGTTCA | 170 | 0.0 | 27.790915 | 9 |
| GAGACCG | 155 | 0.0 | 27.577467 | 27 |
| AGAGCGG | 180 | 0.0 | 27.518702 | 5 |
| ACCGATG | 165 | 0.0 | 27.269585 | 30 |
| CGATGCT | 165 | 0.0 | 27.269585 | 32 |
| AGACCGA | 175 | 0.0 | 25.711323 | 28 |
| AATGCCG | 190 | 0.0 | 23.681479 | 21 |
| ATGCCGA | 190 | 0.0 | 23.681479 | 22 |