Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390620.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 197724 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTTTGAC | 25 | 0.0021044088 | 35.99474 | 45 |
| GAAGCAT | 140 | 2.2146138E-5 | 14.4621725 | 27 |
| TACTGTA | 95 | 0.005360409 | 14.208449 | 20 |
| GCATTCT | 145 | 3.0830983E-5 | 13.963477 | 30 |
| CAGAAAC | 210 | 4.4512308E-7 | 12.855264 | 37 |
| CAGAAGC | 160 | 7.7693665E-5 | 12.6544 | 25 |
| CCAGCAC | 180 | 1.6790835E-5 | 12.498174 | 29 |
| GACAGAA | 200 | 3.6249457E-6 | 12.373192 | 23 |
| ATATCTT | 205 | 4.7231842E-6 | 12.083631 | 3 |
| TATTCAA | 135 | 0.0039914143 | 11.664962 | 29 |
| TAATCCC | 155 | 8.4483076E-4 | 11.611206 | 24 |
| GCACTTT | 180 | 2.328647E-4 | 11.248357 | 32 |
| CTAGACA | 160 | 0.001102182 | 11.248356 | 20 |
| AAGCATT | 160 | 0.001102182 | 11.248356 | 28 |
| TCTCAGA | 245 | 2.8612503E-6 | 11.018798 | 34 |
| TAGACAG | 185 | 3.001913E-4 | 10.944346 | 21 |
| TTTCACC | 145 | 0.006747249 | 10.87148 | 4 |
| GTAATCC | 170 | 0.001828088 | 10.586688 | 23 |
| AGCATTC | 150 | 0.008743476 | 10.498466 | 29 |
| AGAAGCA | 215 | 1.0291698E-4 | 10.463587 | 26 |