Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378697.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1044259 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGCTAT | 75 | 0.0 | 42.0 | 31 |
| TCGTATG | 90 | 0.0 | 34.99832 | 43 |
| CGTATGC | 95 | 0.0 | 33.157894 | 44 |
| ACCGCTA | 95 | 0.0 | 33.156307 | 30 |
| TCTCGTA | 95 | 0.0 | 33.156307 | 41 |
| CGCTATT | 110 | 0.0 | 32.727272 | 32 |
| GCGGTTC | 105 | 0.0 | 32.139782 | 8 |
| CTCGTAT | 100 | 0.0 | 31.498491 | 42 |
| GAGCGGT | 110 | 0.0 | 30.692104 | 6 |
| AGACCGC | 110 | 0.0 | 28.63499 | 28 |
| CGGTTCA | 120 | 0.0 | 28.122305 | 9 |
| AGCGGTT | 125 | 0.0 | 26.997416 | 7 |
| TGCCGAG | 125 | 0.0 | 26.997416 | 23 |
| ATCTCGT | 125 | 1.8189894E-12 | 25.198793 | 40 |
| AGAGCGG | 135 | 0.0 | 25.008383 | 5 |
| AATGCCG | 135 | 0.0 | 24.997608 | 21 |
| CCGAGAC | 140 | 5.456968E-12 | 22.497847 | 25 |
| AAGAGCG | 155 | 1.8189894E-12 | 21.781494 | 4 |
| ATGCCGA | 155 | 1.8189894E-12 | 21.772108 | 22 |
| GAGACCG | 145 | 9.094947E-12 | 21.722057 | 27 |