Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378650.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1737570 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGGT | 145 | 0.0 | 43.446945 | 29 |
| CCGGTAA | 155 | 0.0 | 40.64509 | 31 |
| ACCGGTA | 170 | 0.0 | 37.057686 | 30 |
| CGGTAAT | 180 | 0.0 | 34.99993 | 32 |
| CGTATGC | 205 | 0.0 | 34.024326 | 44 |
| TCGTATG | 195 | 0.0 | 33.46051 | 43 |
| AGACCGG | 200 | 0.0 | 31.499033 | 28 |
| TCTCGTA | 220 | 0.0 | 29.659033 | 41 |
| AATGCCG | 230 | 0.0 | 29.345238 | 21 |
| ATGCCGA | 240 | 0.0 | 28.122519 | 22 |
| CTCGTAT | 235 | 0.0 | 27.765903 | 42 |
| GAGACCG | 235 | 0.0 | 27.764307 | 27 |
| GAGCGGT | 245 | 0.0 | 26.638733 | 6 |
| AGCGGTT | 260 | 0.0 | 25.9585 | 7 |
| AAGAGCG | 270 | 0.0 | 25.00643 | 4 |
| TGCCGAG | 270 | 0.0 | 24.998514 | 23 |
| ATCTCGT | 275 | 0.0 | 24.545406 | 40 |
| CCGAGAC | 275 | 0.0 | 24.543995 | 25 |
| GCGGTTC | 280 | 0.0 | 23.300846 | 8 |
| CGGTTCA | 295 | 0.0 | 22.116056 | 9 |