Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390699.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 348459 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 30 | 0.005154196 | 29.985937 | 42 |
| TCTCGTA | 45 | 0.0012281917 | 24.988281 | 41 |
| GAGACCG | 70 | 6.9853844E-4 | 19.279442 | 27 |
| ACCATGC | 125 | 1.3798993E-4 | 14.395315 | 9 |
| CGGGGTT | 130 | 0.0029571957 | 12.146306 | 1 |
| CTGGGTC | 130 | 0.0030248417 | 12.109706 | 43 |
| TAGTCCC | 140 | 0.0052563925 | 11.246341 | 23 |
| CCATGCC | 145 | 0.0068249335 | 10.858536 | 10 |
| GAGCCAC | 200 | 6.030052E-4 | 10.152304 | 4 |
| GCCACCA | 180 | 0.0028800198 | 10.026966 | 6 |
| GAGTGTT | 180 | 0.0029565215 | 9.995313 | 34 |
| GCTAATT | 210 | 9.7023934E-4 | 9.63972 | 19 |
| TTCACAT | 195 | 0.005718691 | 9.227766 | 8 |
| TATCTTC | 305 | 3.650608E-4 | 8.136637 | 4 |
| GAAGCAT | 305 | 3.7712255E-4 | 8.112115 | 27 |
| GTAATCC | 315 | 5.332875E-4 | 7.8545866 | 23 |
| ATATCTT | 345 | 1.5879054E-4 | 7.846062 | 3 |
| ATGTTGG | 260 | 0.006722169 | 7.785928 | 13 |
| AGCATTC | 315 | 0.004627516 | 7.1395087 | 29 |
| GGCTGGT | 325 | 0.006259546 | 6.920825 | 23 |