Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378702.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1081119 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 75 | 0.0 | 41.997406 | 42 |
| CGGGTAA | 95 | 0.0 | 33.157383 | 32 |
| CGTATGC | 100 | 0.0 | 31.498056 | 44 |
| TCTCGTA | 100 | 0.0 | 31.498056 | 41 |
| CCGGGTA | 110 | 0.0 | 28.635921 | 31 |
| TCGTATG | 115 | 0.0 | 27.389612 | 43 |
| ACCGGGT | 115 | 0.0 | 27.388348 | 30 |
| GACCGGG | 115 | 0.0 | 27.388348 | 29 |
| CGGTTCA | 125 | 0.0 | 26.997086 | 9 |
| AATGCCG | 135 | 0.0 | 24.998459 | 21 |
| GCGGTTC | 135 | 0.0 | 24.997303 | 8 |
| ATCTCGT | 135 | 3.6379788E-12 | 23.334053 | 40 |
| ATGCCGA | 145 | 0.0 | 23.274427 | 22 |
| AAGAGCG | 160 | 0.0 | 22.507984 | 4 |
| CGGAAGA | 170 | 0.0 | 21.187904 | 1 |
| GAGCGGT | 160 | 1.8189894E-12 | 21.101234 | 6 |
| CCGAGAC | 150 | 1.4551915E-11 | 20.998703 | 25 |
| GAGACCG | 150 | 1.4551915E-11 | 20.997734 | 27 |
| AGACCGG | 150 | 1.4551915E-11 | 20.997734 | 28 |
| AGAGCGG | 175 | 0.0 | 20.578726 | 5 |