Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379067.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 635991 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGCAAGC | 30 | 1.1392312E-4 | 37.500656 | 38 |
| CGGCTAT | 25 | 0.002107035 | 35.9978 | 17 |
| CGCCTTA | 65 | 3.6743586E-10 | 34.61599 | 32 |
| TCGTATG | 80 | 3.3905962E-9 | 28.123281 | 43 |
| GCGGTTC | 90 | 3.947207E-10 | 27.498318 | 8 |
| AGAGCGG | 100 | 4.5474735E-11 | 27.004719 | 5 |
| CCGAGAC | 75 | 5.629954E-8 | 27.000473 | 25 |
| CGTATGC | 85 | 6.4737833E-9 | 26.46897 | 44 |
| ATCTCGT | 90 | 1.1896191E-8 | 24.99847 | 40 |
| GAGCGGT | 110 | 1.5097612E-10 | 24.549744 | 6 |
| GACCGCC | 85 | 1.8905666E-7 | 23.823946 | 29 |
| GAGACCG | 85 | 1.8905666E-7 | 23.823946 | 27 |
| ATGCCGA | 85 | 1.8920036E-7 | 23.822073 | 22 |
| AGCGGTT | 125 | 2.910383E-11 | 23.398571 | 7 |
| AGACCGC | 90 | 3.2816024E-7 | 22.500391 | 28 |
| TCTCGTA | 100 | 3.6401616E-8 | 22.498625 | 41 |
| CCGCCTT | 90 | 3.2840944E-7 | 22.498623 | 31 |
| CGGAAGA | 115 | 6.7357178E-9 | 21.527193 | 1 |
| CGGTTCA | 115 | 6.7593646E-9 | 21.520422 | 9 |
| CTCGTAT | 105 | 6.1010724E-8 | 21.427261 | 42 |