Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378618.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 775443 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TCCAGGGATTTATAAGCCGATGACGTCATAACATCCCTGACCCTTTAAATA | 3061 | 0.3947421022563877 | No Hit |
| TCGTTGGAATTCCTCGGGGAATTCGGTATTCCCAGGCGGTCTCCCATCCAA | 2403 | 0.30988738050378944 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGGGGA | 390 | 0.0 | 40.95655 | 14 |
| CTCGGGG | 330 | 0.0 | 40.22237 | 13 |
| AATTCGG | 400 | 0.0 | 39.932632 | 20 |
| TCGGTAT | 400 | 0.0 | 39.932632 | 23 |
| ACGTCAT | 345 | 0.0 | 39.777763 | 23 |
| CGATGAC | 345 | 0.0 | 39.777763 | 18 |
| CGGGGAA | 405 | 0.0 | 39.439644 | 15 |
| TTCGGTA | 405 | 0.0 | 39.439644 | 22 |
| CGTCATA | 350 | 0.0 | 39.212036 | 24 |
| GATGACG | 350 | 0.0 | 39.209507 | 19 |
| GAATTCG | 415 | 0.0 | 39.03139 | 19 |
| GGCGGTC | 410 | 0.0 | 38.96118 | 35 |
| ATTCGGT | 410 | 0.0 | 38.958668 | 21 |
| TAAGCCG | 360 | 0.0 | 38.74528 | 13 |
| ATGACGT | 355 | 0.0 | 38.65726 | 20 |
| GCGGTCT | 415 | 0.0 | 38.49177 | 36 |
| AGGCGGT | 415 | 0.0 | 38.49177 | 34 |
| CGGTATT | 415 | 0.0 | 38.49177 | 24 |
| GACGTCA | 360 | 0.0 | 38.120358 | 22 |
| CAGGCGG | 420 | 0.0 | 38.03353 | 33 |