Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390702.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 536015 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATGCGTC | 20 | 7.042348E-4 | 44.98386 | 40 |
| ACCGGTC | 30 | 1.1415168E-4 | 37.48655 | 30 |
| GACCGGT | 35 | 2.8243204E-4 | 32.13133 | 29 |
| ATCTCGT | 40 | 6.174757E-4 | 28.114914 | 40 |
| AGATCGG | 40 | 6.174757E-4 | 28.114914 | 17 |
| TCTCGTA | 40 | 6.174757E-4 | 28.114914 | 41 |
| CCGGTCA | 40 | 6.174757E-4 | 28.114914 | 31 |
| CTCGTAT | 45 | 0.0012282662 | 24.991034 | 42 |
| TATCTCG | 45 | 0.0012282662 | 24.991034 | 39 |
| TCGTATG | 45 | 0.0012282662 | 24.991034 | 43 |
| ATCGGAA | 45 | 0.0012282662 | 24.991034 | 19 |
| CCGCCAC | 50 | 0.0022372017 | 22.544506 | 4 |
| GATCGGA | 50 | 0.0022677665 | 22.49193 | 18 |
| TCGGAAG | 65 | 4.244427E-4 | 20.761784 | 20 |
| CGGGTGT | 55 | 0.0038869558 | 20.496922 | 1 |
| CGTATGC | 55 | 0.0039420207 | 20.447208 | 44 |
| AGACCGG | 55 | 0.0039420207 | 20.447208 | 28 |
| GCGGTTC | 70 | 6.980515E-4 | 19.284193 | 8 |
| CGGTTCA | 70 | 6.980515E-4 | 19.284193 | 9 |
| GAGACCG | 60 | 0.0065195546 | 18.743275 | 27 |