Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379237.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 843478 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGTTAG | 65 | 0.0 | 41.53753 | 32 |
| CTCGTAT | 65 | 9.094947E-12 | 38.07607 | 42 |
| CCGGTTA | 75 | 1.8189894E-12 | 35.999195 | 31 |
| ACCGGTT | 80 | 3.6379788E-12 | 33.749245 | 30 |
| GACCGGT | 80 | 3.6379788E-12 | 33.749245 | 29 |
| CGTATGC | 75 | 4.7293724E-11 | 32.99926 | 44 |
| TCTCGTA | 75 | 4.7293724E-11 | 32.99926 | 41 |
| AGAGCGG | 85 | 5.456968E-12 | 31.76776 | 5 |
| CGGTTCA | 85 | 5.456968E-12 | 31.763994 | 9 |
| GAGCGGT | 85 | 5.456968E-12 | 31.763994 | 6 |
| GCGGTTC | 95 | 2.3646862E-11 | 28.420416 | 8 |
| AGCGGTT | 95 | 2.3646862E-11 | 28.420416 | 7 |
| AATGCCG | 95 | 2.3646862E-11 | 28.420416 | 21 |
| TCGTATG | 95 | 2.3646862E-11 | 28.420416 | 43 |
| ATGCCGA | 95 | 2.3646862E-11 | 28.420416 | 22 |
| CGGAAGA | 105 | 3.6379788E-12 | 27.86643 | 1 |
| GAGACCG | 110 | 5.456968E-12 | 26.590313 | 27 |
| AAGAGCG | 105 | 8.367351E-11 | 25.718283 | 4 |
| AGACCGG | 105 | 8.54925E-11 | 25.713709 | 28 |
| ATCTCGT | 105 | 2.3646862E-9 | 23.5709 | 40 |