Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379258.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 520909 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATCTTCG | 85 | 6.4646883E-9 | 26.47025 | 5 |
| CGTATAA | 75 | 1.6948652E-6 | 23.999693 | 10 |
| CTTCGTA | 90 | 3.2802018E-7 | 22.499712 | 7 |
| TCGTATA | 80 | 2.969904E-6 | 22.499712 | 9 |
| TTCGTAT | 90 | 8.237948E-6 | 19.999743 | 8 |
| TCTTCGT | 130 | 2.7639544E-8 | 19.038218 | 6 |
| CCAACGA | 90 | 0.003750572 | 14.999807 | 6 |
| TCCAACG | 100 | 0.007544375 | 13.499827 | 5 |
| ACTAGAC | 235 | 8.976713E-9 | 13.404084 | 19 |
| CTAGACA | 370 | 0.0 | 12.770107 | 20 |
| CGAACTC | 165 | 1.04091145E-4 | 12.272571 | 8 |
| CGGGGTT | 130 | 0.003013637 | 12.117556 | 1 |
| TAGACAG | 395 | 7.2759576E-12 | 11.39226 | 21 |
| TCGAACT | 180 | 2.3397095E-4 | 11.249856 | 7 |
| GCCCAGA | 230 | 2.0458468E-4 | 9.782484 | 21 |
| AGCATTC | 370 | 4.553476E-8 | 9.729606 | 30 |
| TATCTTC | 425 | 3.919922E-9 | 9.530205 | 4 |
| CAGAAGC | 325 | 8.379191E-6 | 8.999885 | 26 |
| GCATTCT | 340 | 1.4815927E-5 | 8.602831 | 31 |
| GGGTTTC | 375 | 5.5559412E-6 | 8.401505 | 1 |