Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379068.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 784642 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGAATA | 75 | 0.0 | 38.99818 | 32 |
| CGTATGC | 75 | 1.8189894E-12 | 35.998318 | 44 |
| CTCGTAT | 75 | 1.8189894E-12 | 35.998318 | 42 |
| AGCGGTT | 90 | 0.0 | 34.998363 | 7 |
| ACCGGAA | 85 | 0.0 | 34.410156 | 30 |
| TCTCGTA | 85 | 5.456968E-12 | 31.763222 | 41 |
| AGACCGG | 80 | 1.0004442E-10 | 30.936054 | 28 |
| ATCTCGT | 95 | 0.0 | 30.788034 | 40 |
| GAGCGGT | 90 | 1.2732926E-11 | 30.004333 | 6 |
| TCGTCAA | 30 | 0.0051474497 | 29.9986 | 15 |
| TCGTATG | 90 | 1.2732926E-11 | 29.998598 | 43 |
| AGAGCGG | 95 | 2.3646862E-11 | 28.428783 | 5 |
| GACCGGA | 90 | 3.947207E-10 | 27.498714 | 29 |
| GAGACCG | 90 | 3.947207E-10 | 27.498714 | 27 |
| CGGAAGA | 100 | 4.5474735E-11 | 27.01251 | 1 |
| GCGGTTC | 100 | 4.5474735E-11 | 26.998737 | 8 |
| CCGGAAT | 100 | 4.5474735E-11 | 26.998737 | 31 |
| CCGAGAC | 100 | 1.3442332E-9 | 24.748842 | 25 |
| ATGCCGA | 110 | 1.5097612E-10 | 24.544306 | 22 |
| CGGTTCA | 115 | 2.6557245E-10 | 23.477165 | 9 |