Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378705.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 997235 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATAG | 45 | 8.699826E-7 | 34.99926 | 32 |
| GACCGTA | 45 | 3.4908888E-5 | 29.999367 | 29 |
| GAGCGGT | 55 | 1.3672907E-4 | 24.547398 | 6 |
| TCGTATG | 55 | 1.3682217E-4 | 24.544935 | 43 |
| ACCGTAT | 55 | 1.3682217E-4 | 24.544935 | 30 |
| CGCCCGG | 65 | 1.5237381E-5 | 24.230255 | 13 |
| TTCACGC | 50 | 0.0022646796 | 22.499525 | 15 |
| CTCGTAT | 60 | 2.467545E-4 | 22.499523 | 42 |
| AGACCGT | 70 | 2.7029719E-5 | 22.499523 | 28 |
| GCGGTTC | 65 | 4.2382948E-4 | 20.768791 | 8 |
| CCGTATA | 65 | 4.2382948E-4 | 20.768791 | 31 |
| CGTATGC | 70 | 6.983578E-4 | 19.285305 | 44 |
| TCTCGTA | 70 | 6.983578E-4 | 19.285305 | 41 |
| AGCGGTT | 75 | 0.0011102412 | 17.999619 | 7 |
| GAGACCG | 75 | 0.0011102412 | 17.999619 | 27 |
| CCGAGAC | 75 | 0.0011102412 | 17.999619 | 25 |
| TGCCGAG | 75 | 0.0011102412 | 17.999619 | 23 |
| ATCTCGT | 80 | 0.0017108734 | 16.874641 | 40 |
| CGGTTCA | 80 | 0.0017108734 | 16.874641 | 9 |
| CCGGCTA | 130 | 1.1063195E-5 | 15.576593 | 16 |