Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378763.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 447025 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGGAGC | 20 | 7.0303766E-4 | 44.99776 | 30 |
| CGTATGC | 30 | 1.1391394E-4 | 37.49814 | 44 |
| CTCGTAT | 30 | 1.1391394E-4 | 37.49814 | 42 |
| TCGTATG | 30 | 1.1391394E-4 | 37.49814 | 43 |
| TCTCGTA | 35 | 2.8184595E-4 | 32.141262 | 41 |
| TGCTCGC | 30 | 0.0051451838 | 29.99851 | 37 |
| ATCTCGT | 40 | 6.161993E-4 | 28.123602 | 40 |
| GTCGCCC | 40 | 6.161993E-4 | 28.123602 | 9 |
| CGAGTAG | 55 | 1.364763E-4 | 24.549726 | 5 |
| AGCGGTT | 55 | 1.3668377E-4 | 24.544235 | 7 |
| CCGAGTA | 60 | 2.4613363E-4 | 22.503914 | 4 |
| AGAGCGG | 60 | 2.4613363E-4 | 22.503914 | 5 |
| GCGGTTC | 60 | 2.4650674E-4 | 22.498882 | 8 |
| CGGTTCA | 60 | 2.4650674E-4 | 22.498882 | 9 |
| CGGGATT | 80 | 2.9692928E-6 | 22.49888 | 14 |
| TCGTTGG | 85 | 5.013295E-6 | 21.180157 | 4 |
| CGTTGGA | 85 | 5.013295E-6 | 21.180157 | 5 |
| AAGAGCG | 65 | 4.227679E-4 | 20.772848 | 4 |
| GAGCGGT | 65 | 4.230873E-4 | 20.770521 | 6 |
| ACGGGAT | 55 | 0.0039339657 | 20.45353 | 13 |