Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379239.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 759196 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 40 | 1.5590747E-5 | 33.75252 | 44 |
| TATCTCG | 55 | 4.1643398E-6 | 28.634727 | 39 |
| ATCTCGT | 60 | 8.190389E-6 | 26.248503 | 40 |
| CTCGTAT | 55 | 1.3675238E-4 | 24.545668 | 42 |
| GACCGCA | 55 | 1.3681354E-4 | 24.544052 | 29 |
| TCTCGTA | 60 | 2.4662918E-4 | 22.500198 | 41 |
| GCGGTTC | 60 | 2.4673916E-4 | 22.498716 | 8 |
| CGCGCCC | 60 | 2.4673916E-4 | 22.498716 | 11 |
| AGACCGC | 60 | 2.4673916E-4 | 22.498716 | 28 |
| CGCAAGG | 60 | 2.4673916E-4 | 22.498716 | 32 |
| ATGCCGA | 60 | 2.4673916E-4 | 22.498716 | 22 |
| TGCCGAG | 60 | 2.4673916E-4 | 22.498716 | 23 |
| AATGCCG | 75 | 4.6020123E-5 | 20.998802 | 21 |
| CGGTTCA | 65 | 4.2380384E-4 | 20.768045 | 9 |
| CCGCGCC | 65 | 4.2380384E-4 | 20.768045 | 10 |
| CCGCAAG | 65 | 4.2380384E-4 | 20.768045 | 31 |
| CGCCCGG | 90 | 8.249261E-6 | 19.998857 | 13 |
| TCGTATG | 70 | 6.9800677E-4 | 19.285883 | 43 |
| ACCGCAA | 70 | 6.9831626E-4 | 19.284613 | 30 |
| AGCGGTT | 70 | 6.9831626E-4 | 19.284613 | 7 |