Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379291.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 376949 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 20 | 7.0273486E-4 | 44.999866 | 41 |
| TCGCACC | 30 | 0.0051429947 | 29.99991 | 5 |
| CTCGTAT | 30 | 0.0051429947 | 29.99991 | 42 |
| GAGGGTA | 60 | 0.006502678 | 18.749945 | 9 |
| ATCGCTT | 60 | 0.006502678 | 18.749945 | 14 |
| ACCACAC | 150 | 7.219569E-9 | 17.999949 | 9 |
| CGCCACC | 75 | 0.0011083641 | 17.999949 | 5 |
| GAGGATC | 80 | 0.0017079999 | 16.87495 | 10 |
| GCTAATT | 250 | 5.456968E-12 | 15.299955 | 19 |
| GCCACCA | 285 | 5.2750693E-11 | 13.421014 | 6 |
| CCACACC | 190 | 2.0509196E-6 | 13.026277 | 10 |
| AGCTAAT | 140 | 3.5965384E-4 | 12.857104 | 18 |
| GGCTAAT | 170 | 1.3730848E-4 | 11.91173 | 18 |
| GAGGTTG | 160 | 0.00110491 | 11.249967 | 35 |
| TGCCACC | 165 | 0.0014288481 | 10.909059 | 5 |
| CTAATTT | 395 | 9.640644E-11 | 10.822753 | 20 |
| CACCACA | 250 | 3.667723E-6 | 10.799968 | 8 |
| GGAGGAT | 170 | 0.0018325518 | 10.588204 | 9 |
| ACCATGC | 150 | 0.008758913 | 10.4999695 | 9 |
| GTTGCAG | 150 | 0.008758913 | 10.4999695 | 38 |