Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390619.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 259379 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGGGAT | 45 | 3.4835924E-5 | 29.996145 | 13 |
| AGCGCTC | 45 | 3.4835924E-5 | 29.996145 | 7 |
| ACCGCGC | 30 | 0.00514323 | 29.996143 | 9 |
| CCGCGCC | 30 | 0.00514323 | 29.996143 | 10 |
| GCGCTCC | 30 | 0.00514323 | 29.996143 | 8 |
| CGTCCAC | 30 | 0.00514323 | 29.996143 | 18 |
| CGGGATT | 50 | 7.1436545E-5 | 26.996529 | 14 |
| AACGGGA | 55 | 1.3654075E-4 | 24.542301 | 12 |
| CGCTCCA | 55 | 1.3654075E-4 | 24.542301 | 9 |
| AAAGCGC | 60 | 2.4464814E-4 | 22.518814 | 5 |
| AAGCGCT | 65 | 4.229717E-4 | 20.76656 | 6 |
| CCTTCGT | 55 | 0.0038876596 | 20.491423 | 1 |
| CGTTGGA | 55 | 0.0039094673 | 20.471651 | 5 |
| GGAAACG | 70 | 6.969557E-4 | 19.283236 | 9 |
| CTTCGTT | 60 | 0.006465934 | 18.765678 | 2 |
| TCGTTGG | 60 | 0.006465934 | 18.765678 | 4 |
| TTTGGAC | 60 | 0.006465934 | 18.765678 | 4 |
| GCCACCG | 60 | 0.0065020495 | 18.74759 | 6 |
| CCACCGC | 60 | 0.0065020495 | 18.74759 | 7 |
| AAACGGG | 75 | 0.0011080301 | 17.997686 | 11 |