Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390701.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 785227 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCAGCGG | 25 | 0.0021094999 | 35.99027 | 21 |
| AGATCGG | 75 | 5.6492354E-8 | 26.9927 | 17 |
| ATCGGAA | 80 | 1.0556687E-7 | 25.305658 | 19 |
| GATCGGA | 85 | 1.8970059E-7 | 23.81709 | 18 |
| AGAGCGG | 95 | 2.1193046E-8 | 23.677809 | 25 |
| GCGGTTC | 105 | 6.11908E-8 | 21.42278 | 28 |
| CGGTTCA | 105 | 6.11908E-8 | 21.42278 | 29 |
| AGCGGTT | 95 | 5.541515E-7 | 21.310028 | 27 |
| TCGGAAG | 95 | 5.541515E-7 | 21.310028 | 20 |
| ACCGCGC | 55 | 0.0039357985 | 20.454226 | 9 |
| AAGAGCG | 100 | 9.070918E-7 | 20.244526 | 24 |
| GAGCCGA | 115 | 1.5982732E-7 | 19.559929 | 40 |
| CGTGAGC | 145 | 4.6766218E-9 | 18.648907 | 1 |
| GAGCGGT | 110 | 2.2599597E-6 | 18.404116 | 26 |
| CCGAGAC | 125 | 3.8402686E-7 | 17.995134 | 45 |
| AGCCGAG | 140 | 6.488153E-8 | 17.673794 | 41 |
| CGCCACC | 120 | 5.085636E-6 | 16.903807 | 5 |
| GCCACCG | 100 | 4.1112376E-4 | 15.776887 | 6 |
| CCACCGC | 100 | 4.1654363E-4 | 15.749755 | 7 |
| CCGCGCC | 90 | 0.0037528987 | 14.999766 | 10 |