Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379032.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1052872 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 70 | 2.8861905E-8 | 28.928022 | 42 |
| CGTATGC | 75 | 5.639231E-8 | 26.999485 | 44 |
| GAGCGGT | 80 | 1.05284926E-7 | 25.314425 | 6 |
| AGAGCGG | 80 | 1.05284926E-7 | 25.314425 | 5 |
| TCGCAGG | 45 | 0.0012266223 | 24.999525 | 16 |
| TCTCGTA | 85 | 1.8936771E-7 | 23.823078 | 41 |
| CCGAATA | 60 | 2.464465E-4 | 22.503847 | 2 |
| AACGGGT | 50 | 0.0022647348 | 22.499573 | 12 |
| GAGACCG | 105 | 6.1078026E-8 | 21.428165 | 27 |
| CGGAAGA | 95 | 5.521724E-7 | 21.319435 | 1 |
| CCGAGAC | 100 | 9.055093E-7 | 20.249615 | 25 |
| AGCGGTT | 115 | 1.5953447E-7 | 19.564846 | 7 |
| AAGAGCG | 105 | 1.4442812E-6 | 19.28718 | 4 |
| GCGGTTC | 105 | 1.4455945E-6 | 19.285349 | 8 |
| CGGTTCA | 105 | 1.4455945E-6 | 19.285349 | 9 |
| CCGTGAA | 105 | 1.4455945E-6 | 19.285349 | 31 |
| AGACCGT | 105 | 1.4455945E-6 | 19.285349 | 28 |
| TCGTATG | 105 | 1.4455945E-6 | 19.285349 | 43 |
| ATGCCGA | 105 | 1.4455945E-6 | 19.285349 | 22 |
| CCTTCGT | 155 | 5.329639E-10 | 18.874193 | 1 |