Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378706.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 795562 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GAGCGGT | 35 | 6.235927E-6 | 38.580376 | 6 |
| CCGATAT | 35 | 6.249398E-6 | 38.56825 | 31 |
| GTCGCAT | 25 | 0.0021075713 | 35.997036 | 31 |
| CTCGTAT | 45 | 3.49147E-5 | 29.997528 | 42 |
| ACCGATA | 45 | 3.49147E-5 | 29.997528 | 30 |
| AGGTTCG | 30 | 0.005148391 | 29.997528 | 22 |
| CGCCCCA | 30 | 0.005148391 | 29.997528 | 35 |
| TCTCGTA | 55 | 1.3684505E-4 | 24.543434 | 41 |
| GCGGTTC | 65 | 1.5217327E-5 | 24.233343 | 8 |
| AAGAGCG | 60 | 2.4616657E-4 | 22.506634 | 4 |
| AGCGGTT | 60 | 2.4648104E-4 | 22.50239 | 7 |
| CGGTTCA | 60 | 2.4679585E-4 | 22.498146 | 9 |
| GACCGAT | 60 | 2.4679585E-4 | 22.498146 | 29 |
| TCGTATG | 60 | 2.4679585E-4 | 22.498146 | 43 |
| CCTTCGT | 105 | 6.0666935E-8 | 21.44028 | 1 |
| AGAGCGG | 65 | 4.2282292E-4 | 20.775354 | 5 |
| GAGACCG | 65 | 4.2390067E-4 | 20.76752 | 27 |
| AGACCGA | 65 | 4.2390067E-4 | 20.76752 | 28 |
| CGATATG | 65 | 4.2390067E-4 | 20.76752 | 32 |
| TCGTGCC | 55 | 0.0039302055 | 20.45929 | 6 |