Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379325.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 425922 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 45 | 3.8380676E-10 | 44.99953 | 42 |
| AGACCGT | 50 | 1.0786607E-9 | 40.499577 | 28 |
| ATCTCGT | 55 | 2.741217E-9 | 36.817795 | 40 |
| GACCGTG | 55 | 2.741217E-9 | 36.817795 | 29 |
| GAGACCG | 55 | 2.741217E-9 | 36.817795 | 27 |
| TCTCGTA | 55 | 2.741217E-9 | 36.817795 | 41 |
| TCGTATG | 65 | 3.6561687E-10 | 34.61502 | 43 |
| CGTATGC | 60 | 6.4119376E-9 | 33.74965 | 44 |
| CGGTTCA | 60 | 6.4119376E-9 | 33.74965 | 9 |
| AGCGGTT | 60 | 6.4119376E-9 | 33.74965 | 7 |
| CGTGTAA | 60 | 6.4119376E-9 | 33.74965 | 32 |
| AAGAGCG | 65 | 1.3977115E-8 | 31.157179 | 4 |
| CCGTGTA | 65 | 1.39934855E-8 | 31.15352 | 31 |
| GAGCGGT | 65 | 1.39934855E-8 | 31.15352 | 6 |
| CCGAGAC | 65 | 1.39934855E-8 | 31.15352 | 25 |
| GCGGTTC | 70 | 2.8774593E-8 | 28.92827 | 8 |
| AGAGCGG | 70 | 2.8774593E-8 | 28.92827 | 5 |
| CGGAAGA | 85 | 1.8858736E-7 | 23.826078 | 1 |
| ACCGTGT | 85 | 1.88802E-7 | 23.82328 | 30 |
| TGCCGAG | 85 | 1.88802E-7 | 23.82328 | 23 |