Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390633.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1135513 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTCCGGT | 25 | 0.0021100144 | 35.989853 | 13 |
| TTAGCGT | 30 | 0.005154331 | 29.991545 | 13 |
| TACATCG | 30 | 0.0051554414 | 29.990225 | 8 |
| CCGCAAG | 55 | 4.1754593E-6 | 28.627031 | 31 |
| AGCTACG | 50 | 7.17207E-5 | 26.992392 | 35 |
| CGCAAGG | 60 | 8.212186E-6 | 26.241447 | 32 |
| CTCGTAT | 65 | 1.5275802E-5 | 24.222874 | 42 |
| TATCTCG | 70 | 2.7088478E-5 | 22.493658 | 39 |
| TCTCGTA | 70 | 2.7097694E-5 | 22.492668 | 41 |
| ATCGGAA | 125 | 7.548806E-10 | 21.59296 | 19 |
| AGACCGC | 75 | 4.6094465E-5 | 20.995932 | 28 |
| ACCGCAA | 75 | 4.611011E-5 | 20.995007 | 30 |
| CGTATGC | 75 | 4.6141417E-5 | 20.993158 | 44 |
| ACGCCCG | 55 | 0.0039429413 | 20.44878 | 12 |
| TGTCGAG | 55 | 0.003943947 | 20.44788 | 8 |
| GATCGGA | 135 | 1.9717845E-9 | 19.994362 | 18 |
| GACCGCA | 80 | 7.574164E-5 | 19.683685 | 29 |
| TCGTATA | 105 | 1.4500547E-6 | 19.27943 | 9 |
| TGTGCGG | 60 | 0.0065210513 | 18.744717 | 33 |
| AGATCGG | 145 | 4.789399E-9 | 18.61544 | 17 |