Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379273.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 558643 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGGCTC | 120 | 5.164886E-6 | 16.874529 | 22 |
| CTCGGCT | 135 | 1.5790785E-5 | 14.999582 | 21 |
| CGGCTCA | 135 | 1.5790785E-5 | 14.999582 | 23 |
| ACTAGAC | 185 | 9.584619E-8 | 14.594188 | 19 |
| CCGCCAC | 95 | 0.0053628664 | 14.213947 | 4 |
| CGCCACC | 145 | 3.094328E-5 | 13.967629 | 5 |
| CTCCGCC | 135 | 2.6487507E-4 | 13.332962 | 37 |
| TCTCGGC | 135 | 2.6487507E-4 | 13.332962 | 20 |
| ATCTCGG | 120 | 0.0016548997 | 13.124634 | 19 |
| TCTCGAA | 125 | 0.0022494823 | 12.599649 | 25 |
| TCCGCCT | 145 | 4.8427517E-4 | 12.413447 | 38 |
| AGCATTC | 365 | 1.8189894E-12 | 12.328424 | 29 |
| GCATTCT | 360 | 1.8189894E-11 | 11.87467 | 30 |
| CGCCTCC | 135 | 0.0040035113 | 11.666342 | 40 |
| GAGTGCA | 350 | 1.3460522E-10 | 11.574214 | 4 |
| GGAGTGC | 335 | 7.9671736E-10 | 11.420659 | 3 |
| GCCACCA | 395 | 7.2759576E-12 | 11.392088 | 6 |
| GGGTGAC | 140 | 0.005251491 | 11.249687 | 28 |
| TGCAACC | 250 | 3.6791644E-6 | 10.7997 | 31 |
| GCACTCC | 275 | 9.93623E-7 | 10.636067 | 16 |