Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390705.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 644521 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGTTCG | 20 | 6.9695985E-4 | 45.080154 | 4 |
| GATCGGA | 55 | 1.12953785E-7 | 32.71689 | 18 |
| GACCGTT | 35 | 2.8242634E-4 | 32.13266 | 29 |
| CATCGAG | 30 | 0.0051535894 | 29.990482 | 44 |
| AGACCGT | 40 | 6.174627E-4 | 28.11608 | 28 |
| ACCGTTG | 40 | 6.174627E-4 | 28.11608 | 30 |
| ATCGGAA | 60 | 8.204439E-6 | 26.241673 | 19 |
| AGATCGG | 70 | 9.3226663E-7 | 25.70613 | 17 |
| TCGGAAG | 65 | 1.5261474E-5 | 24.223082 | 20 |
| TCTCGTA | 50 | 0.0022677155 | 22.492863 | 41 |
| GAGACCG | 55 | 0.0039419276 | 20.448055 | 27 |
| TCGTATG | 55 | 0.0039419276 | 20.448055 | 43 |
| GCGGTTC | 80 | 7.574864E-5 | 19.681255 | 28 |
| CGGAAGA | 95 | 1.3179673E-5 | 18.941359 | 21 |
| CGGAAGC | 60 | 0.006519396 | 18.744051 | 25 |
| AGCGGTT | 85 | 1.2063296E-4 | 18.523535 | 27 |
| CGGTTCA | 90 | 1.8686007E-4 | 17.494448 | 29 |
| AGAGCGG | 90 | 1.8686007E-4 | 17.494448 | 25 |
| CCCGCCA | 80 | 0.0016903811 | 16.903744 | 3 |
| CCGGCTA | 120 | 5.181624E-6 | 16.869646 | 16 |