Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378743.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 734963 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 70 | 0.0 | 41.784958 | 44 |
| GACCGTG | 70 | 0.0 | 41.784958 | 29 |
| GCGGTTC | 80 | 0.0 | 36.561836 | 8 |
| GAGACCG | 80 | 0.0 | 36.561836 | 27 |
| CCGTGCA | 85 | 0.0 | 34.41114 | 31 |
| AGACCGT | 85 | 0.0 | 34.41114 | 28 |
| AGCGGTT | 90 | 0.0 | 32.499413 | 7 |
| TCTCGTA | 95 | 0.0 | 30.788916 | 41 |
| CGGTTCA | 105 | 0.0 | 29.999456 | 9 |
| TCGTATG | 100 | 1.8189894E-12 | 29.24947 | 43 |
| AGAGCGG | 110 | 5.456968E-12 | 26.592236 | 5 |
| ATCTCGT | 110 | 5.456968E-12 | 26.590425 | 40 |
| CTCGTAT | 110 | 5.456968E-12 | 26.590425 | 42 |
| ACCGTGC | 110 | 5.456968E-12 | 26.590425 | 30 |
| GAGCGGT | 115 | 9.094947E-12 | 25.43605 | 6 |
| GTATGCC | 115 | 9.094947E-12 | 25.434322 | 45 |
| ATGCGCC | 45 | 0.0012248051 | 25.00465 | 2 |
| AAGAGCG | 120 | 1.6370905E-11 | 24.376217 | 4 |
| CGTATAA | 80 | 2.9728017E-6 | 22.499592 | 10 |
| CCGAGAC | 135 | 8.367351E-11 | 21.666275 | 25 |