Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390600.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 355775 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTCTAT | 20 | 7.030281E-4 | 44.995365 | 32 |
| ACCGTCT | 25 | 0.002106222 | 35.996292 | 30 |
| CTCGTAT | 30 | 0.0051451293 | 29.996908 | 42 |
| CCGTCTA | 30 | 0.0051451293 | 29.996908 | 31 |
| GACCGTC | 40 | 6.161422E-4 | 28.122103 | 29 |
| GAGCGGT | 45 | 0.0012256262 | 24.997423 | 6 |
| CGGTTCA | 55 | 1.3665664E-4 | 24.542925 | 9 |
| GCGGTTC | 50 | 0.0022629146 | 22.497683 | 8 |
| TCTCGTA | 50 | 0.0022629146 | 22.497683 | 41 |
| CCTTCGT | 55 | 0.0038921677 | 20.489874 | 1 |
| AGCGGTT | 55 | 0.003933626 | 20.452436 | 7 |
| AGACCGT | 60 | 0.0065057357 | 18.748068 | 28 |
| ATCTCGT | 75 | 0.0011089429 | 17.998144 | 40 |
| CTAACAT | 80 | 0.0017088896 | 16.87326 | 19 |
| TATCTTC | 345 | 0.0 | 15.661567 | 4 |
| TCTTCGT | 90 | 0.003749709 | 14.998454 | 7 |
| GAAGCAT | 210 | 1.8371793E-9 | 14.998453 | 27 |
| ATATCTT | 375 | 0.0 | 14.408642 | 3 |
| AGATTCC | 95 | 0.0053700386 | 14.209061 | 16 |
| ACTAGAC | 130 | 1.921929E-4 | 13.844727 | 19 |