Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379271.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 427314 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCTTCGT | 40 | 6.1562867E-4 | 28.127707 | 1 |
| CTCGTAT | 40 | 6.1562867E-4 | 28.127707 | 42 |
| TCGTATG | 40 | 6.1562867E-4 | 28.127707 | 43 |
| CCGAGAC | 40 | 6.1605027E-4 | 28.124414 | 25 |
| CGGAAGA | 50 | 7.143374E-5 | 27.002598 | 1 |
| CGTATGC | 45 | 0.001223771 | 25.005331 | 44 |
| CGTAAAG | 45 | 0.0012254423 | 24.99948 | 32 |
| ACCGTAA | 45 | 0.0012254423 | 24.99948 | 30 |
| TCTCGTA | 50 | 0.0022610344 | 22.502165 | 41 |
| AGCGGTT | 50 | 0.0022625728 | 22.499533 | 7 |
| TATCTCG | 50 | 0.0022625728 | 22.499533 | 39 |
| GCGGTTC | 55 | 0.003933028 | 20.45412 | 8 |
| CCGTAAA | 55 | 0.003933028 | 20.45412 | 31 |
| AAGAGCG | 70 | 6.974624E-4 | 19.285313 | 4 |
| ATCTCGT | 60 | 0.0065047396 | 18.74961 | 40 |
| CGGTTCA | 60 | 0.0065047396 | 18.74961 | 9 |
| AGAGCGG | 60 | 0.0065047396 | 18.74961 | 5 |
| GTATGCC | 95 | 0.0053611146 | 14.213557 | 45 |
| ACCTCGT | 95 | 0.005369447 | 14.21023 | 40 |
| CGAGACC | 95 | 0.005369447 | 14.21023 | 26 |