Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379293.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 479267 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGGTTC | 45 | 1.9246727E-8 | 39.999165 | 8 |
| CGGTTCA | 45 | 1.9246727E-8 | 39.999165 | 9 |
| GAGCGGT | 45 | 1.9246727E-8 | 39.999165 | 6 |
| ACCGGGT | 50 | 4.8696165E-8 | 35.99925 | 30 |
| GACCGGG | 50 | 4.8696165E-8 | 35.99925 | 29 |
| AGCGGTT | 50 | 4.8696165E-8 | 35.99925 | 7 |
| CTCGTAT | 45 | 8.687275E-7 | 34.999268 | 42 |
| GCGCTCC | 45 | 8.687275E-7 | 34.999268 | 8 |
| CGGGTAG | 55 | 1.12559064E-7 | 32.72659 | 32 |
| ATCTCGT | 55 | 1.12559064E-7 | 32.72659 | 40 |
| TCTCGTA | 55 | 1.12559064E-7 | 32.72659 | 41 |
| CCGAGAC | 55 | 1.12559064E-7 | 32.72659 | 25 |
| ATGCCGA | 55 | 1.12559064E-7 | 32.72659 | 22 |
| TATCTCG | 50 | 1.9787549E-6 | 31.499342 | 39 |
| AAGAGCG | 60 | 2.4122346E-7 | 30.002502 | 4 |
| CCGGGTA | 60 | 2.4144356E-7 | 29.999374 | 31 |
| GAGACCG | 60 | 2.4144356E-7 | 29.999374 | 27 |
| AGACCGG | 60 | 2.4144356E-7 | 29.999374 | 28 |
| AGAGCGG | 60 | 2.4144356E-7 | 29.999374 | 5 |
| TGCCGAG | 65 | 4.864287E-7 | 27.691729 | 23 |