Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390743.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 886740 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTCGACT | 30 | 0.005153859 | 29.99139 | 12 |
| GATCGGA | 45 | 0.0012279832 | 24.994236 | 18 |
| AGATCGG | 50 | 0.0022672405 | 22.494812 | 17 |
| AGCGCTC | 65 | 4.240549E-4 | 20.766783 | 7 |
| GCGCTCC | 65 | 4.240549E-4 | 20.766783 | 8 |
| CCGAACT | 55 | 0.0039000823 | 20.4868 | 4 |
| ACCCGGC | 55 | 0.0039410996 | 20.44983 | 14 |
| CGCTCCA | 90 | 1.8667507E-4 | 17.497938 | 9 |
| CCGGCTA | 105 | 3.1172887E-5 | 17.138905 | 16 |
| CGGCTAA | 120 | 5.181775E-6 | 16.871109 | 17 |
| TCGTTGG | 135 | 8.4368185E-7 | 16.692947 | 4 |
| CGTTGGA | 120 | 9.6042066E-5 | 15.026198 | 5 |
| CCTTCGT | 125 | 1.3608663E-4 | 14.423521 | 1 |
| GCCCGGC | 125 | 1.3825967E-4 | 14.39668 | 14 |
| GCCACCA | 520 | 0.0 | 14.303784 | 6 |
| ACCACGC | 160 | 5.029169E-6 | 14.060843 | 9 |
| CTCCGCC | 150 | 4.2798813E-5 | 13.496125 | 37 |
| TTCGTTG | 135 | 2.6144998E-4 | 13.355112 | 3 |
| GGAAACG | 170 | 9.40841E-6 | 13.233735 | 9 |
| TCGCTTG | 155 | 5.819447E-5 | 13.061504 | 15 |