Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379254.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 705623 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGAGCGG | 50 | 1.979406E-6 | 31.501587 | 5 |
| GAGCGGT | 50 | 1.980503E-6 | 31.499353 | 6 |
| CGTATGC | 45 | 3.4877536E-5 | 30.00151 | 44 |
| TCTCGTA | 45 | 3.4877536E-5 | 30.00151 | 41 |
| GCGGTTC | 45 | 3.4894416E-5 | 29.999386 | 8 |
| ACCGCTC | 45 | 3.4894416E-5 | 29.999386 | 30 |
| CCTTCGT | 85 | 6.4592314E-9 | 26.475676 | 1 |
| AGACCGC | 55 | 1.3676615E-4 | 24.544952 | 28 |
| CGGAAGA | 65 | 1.5204034E-5 | 24.235426 | 1 |
| AAGAGCG | 65 | 1.5220738E-5 | 24.23199 | 4 |
| GACCGCT | 65 | 1.5229094E-5 | 24.230272 | 29 |
| CTCGTAT | 60 | 2.465359E-4 | 22.501133 | 42 |
| CCGCTCC | 60 | 2.466542E-4 | 22.499538 | 31 |
| AATGCCG | 60 | 2.466542E-4 | 22.499538 | 21 |
| CGCTCCA | 60 | 2.466542E-4 | 22.499538 | 9 |
| TATCTCG | 60 | 2.466542E-4 | 22.499538 | 39 |
| CCGAGAC | 60 | 2.466542E-4 | 22.499538 | 25 |
| AGCGGTT | 75 | 4.6001252E-5 | 20.999569 | 7 |
| TGCCGAG | 75 | 4.6001252E-5 | 20.999569 | 23 |
| CGGTTCA | 65 | 4.236582E-4 | 20.768806 | 9 |