Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379058.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 633919 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGACT | 65 | 0.0 | 45.0015 | 30 |
| CCGACTG | 70 | 0.0 | 41.783806 | 31 |
| GACCGAC | 75 | 0.0 | 39.0013 | 29 |
| GAGACCG | 75 | 0.0 | 39.0013 | 27 |
| AGACCGA | 80 | 0.0 | 36.563717 | 28 |
| GCGGTTC | 80 | 0.0 | 36.560833 | 8 |
| ACGATGT | 25 | 0.0021052375 | 36.00404 | 4 |
| GAGCGGT | 85 | 0.0 | 34.415627 | 6 |
| CGGTTCA | 85 | 0.0 | 34.4102 | 9 |
| CGTATGC | 80 | 3.6379788E-12 | 33.74846 | 44 |
| TATCTCG | 85 | 5.456968E-12 | 31.76326 | 39 |
| CCGAGAC | 95 | 0.0 | 30.7905 | 25 |
| CGACTGA | 95 | 0.0 | 30.7905 | 32 |
| AGCGGTT | 95 | 0.0 | 30.788073 | 7 |
| GCGACTC | 30 | 0.0051466837 | 29.998634 | 43 |
| AATGCCG | 90 | 1.2732926E-11 | 29.998632 | 21 |
| TCTCGTA | 90 | 1.2732926E-11 | 29.998632 | 41 |
| TGCCGAG | 105 | 0.0 | 29.998632 | 23 |
| TCGTATG | 95 | 2.3646862E-11 | 28.419758 | 43 |
| AGAGCGG | 105 | 3.6379788E-12 | 27.86027 | 5 |