Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390667.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 812008 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGATCGG | 120 | 4.5292836E-10 | 22.494085 | 17 |
| GATCGGA | 120 | 4.5292836E-10 | 22.494085 | 18 |
| ATCGGAA | 130 | 1.2296368E-9 | 20.763775 | 19 |
| CGGAAGA | 130 | 1.2314558E-9 | 20.762495 | 21 |
| CCGAGAC | 140 | 3.09592E-9 | 19.27946 | 45 |
| TCGGAAG | 150 | 7.2850526E-9 | 17.994164 | 20 |
| AGCGGTT | 170 | 3.4120603E-8 | 15.878179 | 27 |
| CCGAGAT | 170 | 3.4120603E-8 | 15.878179 | 14 |
| AAGAGCG | 175 | 4.8763468E-8 | 15.423568 | 24 |
| GCGGTTC | 185 | 9.6306394E-8 | 14.59076 | 28 |
| ATCTTCG | 95 | 0.0053092493 | 14.2366 | 6 |
| GAGCGGT | 195 | 1.8338324E-7 | 13.841663 | 26 |
| CGGTTCA | 200 | 2.4949077E-7 | 13.496453 | 29 |
| GAGATCG | 205 | 3.3693686E-7 | 13.167272 | 16 |
| ATGCCGA | 230 | 9.838186E-8 | 12.715615 | 11 |
| CGAGATC | 220 | 7.9341044E-7 | 12.269502 | 15 |
| AATGCCG | 240 | 1.7129969E-7 | 12.185799 | 10 |
| AGAGCGG | 225 | 1.0418044E-6 | 11.996109 | 25 |
| TCTCGAA | 195 | 3.7690108E-5 | 11.559632 | 5 |
| CTCGAAC | 160 | 0.0010904266 | 11.270641 | 6 |