Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379391.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1585079 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGTAAT | 130 | 0.0 | 36.34445 | 35 |
| AGCGTAA | 135 | 0.0 | 34.998356 | 34 |
| CGAGCGT | 145 | 0.0 | 32.584675 | 32 |
| CGGTTCA | 150 | 0.0 | 31.49852 | 9 |
| ACCGAGC | 150 | 0.0 | 31.49852 | 30 |
| GAGCGTA | 150 | 0.0 | 31.49852 | 33 |
| CTCGTAT | 160 | 0.0 | 29.531727 | 42 |
| CCGAGCG | 160 | 0.0 | 29.529863 | 31 |
| TCTCGTA | 165 | 0.0 | 28.636826 | 41 |
| CGTAATC | 165 | 0.0 | 28.636826 | 36 |
| CAACGCG | 40 | 6.168877E-4 | 28.12368 | 25 |
| GAGCGGT | 175 | 0.0 | 27.005547 | 6 |
| CGTATGC | 175 | 0.0 | 26.998732 | 44 |
| ATGCCGA | 175 | 0.0 | 26.998732 | 22 |
| ATCTCGT | 195 | 0.0 | 26.53889 | 40 |
| GCGGTTC | 180 | 0.0 | 26.248768 | 8 |
| GACCGAG | 180 | 0.0 | 26.248768 | 29 |
| CCGAGAC | 190 | 0.0 | 24.867254 | 25 |
| TCGTATG | 200 | 0.0 | 24.748838 | 43 |
| AAGAGCG | 195 | 0.0 | 24.236513 | 4 |