Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378717.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 492758 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGTATG | 85 | 0.0 | 34.4113 | 43 |
| GACCGTA | 90 | 0.0 | 32.49956 | 29 |
| CGTATGC | 95 | 0.0 | 30.789057 | 44 |
| CCGTAGT | 95 | 0.0 | 30.789057 | 31 |
| AGAGCGG | 105 | 0.0 | 30.002638 | 5 |
| CTCGTAT | 100 | 1.8189894E-12 | 29.249605 | 42 |
| ACCGTAG | 100 | 1.8189894E-12 | 29.249605 | 30 |
| GCGGTTC | 110 | 0.0 | 28.635977 | 8 |
| AGCGGTT | 120 | 0.0 | 28.12462 | 7 |
| CGGTTCA | 115 | 0.0 | 27.390932 | 9 |
| GAGCGGT | 120 | 0.0 | 26.252308 | 6 |
| TCTCGTA | 115 | 9.094947E-12 | 25.434437 | 41 |
| AATGCCG | 120 | 1.6370905E-11 | 24.374672 | 21 |
| GAGACCG | 130 | 1.8189894E-12 | 24.23044 | 27 |
| CGGAAGA | 125 | 2.910383E-11 | 23.402058 | 1 |
| TATCTCG | 125 | 2.910383E-11 | 23.399683 | 39 |
| CGTAGTC | 130 | 5.0931703E-11 | 22.499695 | 32 |
| AGACCGT | 150 | 0.0 | 22.499695 | 28 |
| AAGAGCG | 145 | 9.094947E-12 | 21.72605 | 4 |
| ATCTCGT | 140 | 1.364242E-10 | 20.892576 | 40 |