Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390622.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 255195 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CACGCAC | 25 | 0.0020990996 | 36.017254 | 1 |
| CCCCGTC | 30 | 0.005137652 | 30.002613 | 19 |
| ATCGGAA | 30 | 0.005137652 | 30.002613 | 19 |
| GCGGTTC | 30 | 0.0051425793 | 29.996733 | 28 |
| TCGGAAG | 30 | 0.0051425793 | 29.996733 | 20 |
| CCGAGAC | 30 | 0.0051425793 | 29.996733 | 45 |
| ACTAGAC | 90 | 0.0037459834 | 14.998366 | 20 |
| TATCTTC | 145 | 4.814153E-4 | 12.417308 | 5 |
| GCACTCC | 165 | 0.001425032 | 10.910041 | 16 |
| CAGCTAC | 145 | 0.0067857075 | 10.865145 | 3 |
| AGCTACT | 145 | 0.0067857075 | 10.865145 | 4 |
| ATTCTCA | 240 | 2.7540904E-5 | 10.311377 | 33 |
| TGCACTC | 175 | 0.0023259206 | 10.286611 | 15 |
| CTAGACA | 185 | 0.003692264 | 9.728671 | 20 |
| CAGAAAC | 240 | 3.120731E-4 | 9.375816 | 38 |
| GAAATAT | 225 | 0.0018047177 | 9.004313 | 1 |
| GGCAGGA | 200 | 0.0070179934 | 8.99902 | 22 |
| GACAGAA | 235 | 0.0026928696 | 8.616083 | 23 |
| CCTCAGC | 235 | 0.0026928696 | 8.616083 | 32 |
| TTCTCAG | 260 | 0.006696774 | 7.7876134 | 34 |