Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390605.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 335786 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCCGC | 45 | 0.0012252902 | 24.998096 | 27 |
| CCCATAA | 95 | 1.31216675E-5 | 18.945925 | 10 |
| ACTAGAC | 165 | 2.3430403E-8 | 16.36239 | 19 |
| TCCCATA | 100 | 4.1585043E-4 | 15.7488 | 9 |
| TTAGCAT | 115 | 0.0011993661 | 13.694611 | 25 |
| TTCCCAT | 170 | 9.362959E-6 | 13.234286 | 8 |
| TGCTTGA | 140 | 3.5969363E-4 | 12.856165 | 16 |
| AAGCATT | 335 | 5.456968E-12 | 12.760222 | 28 |
| AGCATTC | 285 | 7.6397555E-10 | 12.630617 | 29 |
| GCATTCT | 270 | 4.623871E-9 | 12.499048 | 30 |
| TCTTCCC | 260 | 3.6729034E-8 | 12.114463 | 6 |
| GAAGCAT | 335 | 6.184564E-11 | 12.088632 | 27 |
| CTAGACA | 265 | 4.7873982E-8 | 11.885888 | 20 |
| ATATCTT | 380 | 3.6379788E-12 | 11.848261 | 3 |
| TATCTTC | 390 | 5.456968E-12 | 11.54446 | 4 |
| TCTTCAC | 195 | 3.8276034E-5 | 11.537584 | 6 |
| AATATCT | 430 | 0.0 | 11.517612 | 2 |
| ATCTTCC | 215 | 8.1095895E-6 | 11.517612 | 5 |
| AACTAGA | 260 | 4.8010224E-7 | 11.249145 | 18 |
| CAGAAGC | 285 | 1.3126373E-7 | 11.05179 | 25 |