Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390739.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1019446 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCCGGTG | 30 | 0.005154951 | 29.990517 | 12 |
| CTCGTAT | 40 | 6.1770726E-4 | 28.11611 | 42 |
| TCTCGTA | 45 | 0.001228722 | 24.992098 | 41 |
| GCTCCGC | 75 | 4.611456E-5 | 20.994392 | 36 |
| AGCTCCG | 65 | 4.2454235E-4 | 20.763683 | 35 |
| CCTTCGT | 155 | 1.065564E-8 | 17.450653 | 1 |
| CGGAGGT | 105 | 3.1190048E-5 | 17.13828 | 33 |
| AGATCGG | 80 | 0.0017137257 | 16.870493 | 17 |
| AAGAACG | 80 | 0.0017142884 | 16.869665 | 21 |
| CTTCGTT | 185 | 5.484253E-9 | 15.83922 | 2 |
| CGGCTAA | 160 | 2.9709918E-7 | 15.464619 | 17 |
| CGTTGGA | 220 | 2.1100277E-10 | 15.369228 | 5 |
| CCGGCTA | 165 | 4.2111424E-7 | 14.995995 | 16 |
| TCGTTGG | 230 | 4.129106E-10 | 14.700278 | 4 |
| AACGGGA | 205 | 2.1853339E-8 | 14.2637825 | 12 |
| TTCGTTG | 260 | 1.7462298E-10 | 13.871032 | 3 |
| ACTAGAC | 360 | 0.0 | 13.746328 | 19 |
| AGCGCTC | 100 | 0.007561143 | 13.497057 | 7 |
| ACGGGAT | 185 | 1.5317528E-6 | 13.374805 | 13 |
| AAACGGG | 265 | 3.5470293E-9 | 12.732449 | 11 |