Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379323.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 442168 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTGAGC | 110 | 8.552933E-4 | 14.322753 | 1 |
| ATGTGCC | 115 | 0.0011988884 | 13.696926 | 2 |
| TGTCCAC | 145 | 0.0068143643 | 10.861851 | 9 |
| ACTAGAC | 150 | 0.00876406 | 10.499788 | 19 |
| GGCTAAT | 195 | 4.9024227E-4 | 10.384407 | 18 |
| GCCACCA | 330 | 9.832802E-7 | 9.546342 | 6 |
| AATGTCC | 190 | 0.0046096854 | 9.473495 | 7 |
| CTCACAC | 220 | 0.0014818097 | 9.20436 | 14 |
| GAGCCAC | 245 | 3.8510427E-4 | 9.184527 | 4 |
| ACTGCTC | 260 | 6.9765904E-4 | 8.653672 | 44 |
| AGCCACC | 235 | 0.0026959968 | 8.617822 | 5 |
| AGCATTC | 275 | 0.001217032 | 8.181654 | 31 |
| AAGCATT | 335 | 1.1648394E-4 | 8.05954 | 28 |
| GCTAATT | 285 | 0.0017314658 | 7.894578 | 19 |
| TATCTTC | 325 | 7.4289023E-4 | 7.6160927 | 4 |
| TGAGCCA | 355 | 0.0018974275 | 6.9724793 | 3 |
| AATATCT | 360 | 0.00219909 | 6.8756394 | 2 |
| GTGGCTC | 335 | 0.008377019 | 6.716283 | 10 |
| CCAGCTA | 400 | 0.0066281534 | 6.1873755 | 28 |
| AGTGCAG | 410 | 0.008550064 | 6.037147 | 5 |