Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390627.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1664170 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGCCTAA | 30 | 0.005154558 | 29.992085 | 14 |
| CGACGAG | 30 | 0.0051553156 | 29.991186 | 36 |
| AATGCGA | 105 | 3.6379788E-12 | 27.848959 | 34 |
| GACCGAA | 115 | 0.0 | 27.382431 | 29 |
| CGTATGC | 125 | 0.0 | 26.990446 | 44 |
| GAATGCG | 125 | 2.910383E-11 | 23.393124 | 33 |
| TCGTATG | 145 | 0.0 | 23.267626 | 43 |
| AGACCGA | 140 | 5.456968E-12 | 22.494064 | 28 |
| CTCGTAT | 130 | 5.0931703E-11 | 22.492039 | 42 |
| GTGCGTA | 50 | 0.002269696 | 22.492039 | 32 |
| ATGCGAT | 140 | 1.382432E-10 | 20.886719 | 35 |
| CCGAATG | 145 | 2.2009772E-10 | 20.165276 | 31 |
| ACCGAAT | 160 | 3.8198777E-11 | 19.681126 | 30 |
| ATCTCGT | 150 | 3.4742698E-10 | 19.4931 | 40 |
| TCTCGTA | 150 | 3.4742698E-10 | 19.4931 | 41 |
| CGAATGC | 155 | 5.366019E-10 | 18.86429 | 32 |
| GATCGGA | 85 | 1.20756915E-4 | 18.523968 | 18 |
| AGCGCTC | 160 | 8.203642E-10 | 18.275879 | 7 |
| ACACCCG | 75 | 0.0011124746 | 17.995253 | 12 |
| GAGACCG | 195 | 3.45608E-11 | 17.303127 | 27 |