Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390614.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 230984 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGCCCG | 20 | 7.0234004E-4 | 44.99762 | 12 |
| CGCCCGG | 25 | 3.8823106E-5 | 44.99762 | 13 |
| ACCACGC | 40 | 6.153017E-4 | 28.123512 | 9 |
| CGGCTAA | 70 | 2.6920317E-5 | 22.49881 | 17 |
| CCACGCC | 50 | 0.002259871 | 22.49881 | 10 |
| GCCCGGC | 60 | 2.460117E-4 | 22.49881 | 14 |
| CCGGCTA | 65 | 4.2256268E-4 | 20.768131 | 16 |
| CACCACG | 55 | 0.00392837 | 20.453463 | 8 |
| ATACCAG | 60 | 0.0064971033 | 18.749008 | 43 |
| CCCGGCT | 80 | 0.001705866 | 16.874107 | 15 |
| GAAGCAT | 165 | 2.3313987E-8 | 16.362772 | 27 |
| AGCATTC | 180 | 3.8562575E-9 | 16.24914 | 29 |
| GGCTAAT | 145 | 1.7945222E-6 | 15.51642 | 18 |
| AACTAGA | 160 | 4.987218E-6 | 14.061756 | 18 |
| ATATCTT | 225 | 4.807589E-9 | 14.002291 | 3 |
| TATCTTC | 210 | 2.9414878E-8 | 13.930851 | 4 |
| GCTAATT | 180 | 1.1118136E-6 | 13.749271 | 19 |
| ACTAGAC | 170 | 9.330572E-6 | 13.234594 | 19 |
| GAGGCCT | 125 | 0.0022429978 | 12.599333 | 17 |
| AATATCT | 255 | 2.7759597E-8 | 12.354962 | 2 |