Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379296.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 430384 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 40 | 6.7993824E-9 | 44.998608 | 44 |
| GACCGTA | 40 | 6.7993824E-9 | 44.998608 | 29 |
| CCGTAAC | 40 | 6.7993824E-9 | 44.998608 | 31 |
| CGTAACG | 40 | 6.7993824E-9 | 44.998608 | 32 |
| CGGATCT | 45 | 1.9239451E-8 | 39.99876 | 37 |
| ACGGATC | 45 | 1.9239451E-8 | 39.99876 | 36 |
| GTAACGG | 45 | 1.9239451E-8 | 39.99876 | 33 |
| AACGGAT | 50 | 4.8681613E-8 | 35.998886 | 35 |
| GAGACCG | 50 | 4.8681613E-8 | 35.998886 | 27 |
| AGACCGT | 50 | 4.8681613E-8 | 35.998886 | 28 |
| ACCGTAA | 50 | 4.8681613E-8 | 35.998886 | 30 |
| GAGCGGT | 55 | 1.1229349E-7 | 32.733864 | 6 |
| AGAGCGG | 55 | 1.1229349E-7 | 32.733864 | 5 |
| CTCGTAT | 55 | 1.12522685E-7 | 32.72626 | 42 |
| TAACGGA | 55 | 1.12522685E-7 | 32.72626 | 34 |
| TCGTATG | 55 | 1.12522685E-7 | 32.72626 | 43 |
| AGCGGTT | 60 | 2.4136898E-7 | 29.99907 | 7 |
| GCGGTTC | 65 | 4.862777E-7 | 27.69145 | 8 |
| TCTCGTA | 65 | 4.862777E-7 | 27.69145 | 41 |
| CCGAGAC | 65 | 4.862777E-7 | 27.69145 | 25 |