Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378704.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1231045 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGACCA | 105 | 0.0 | 38.57042 | 32 |
| ACCGGAC | 115 | 0.0 | 35.21647 | 30 |
| CTCGTAT | 110 | 0.0 | 34.771816 | 42 |
| GACCGGA | 130 | 0.0 | 34.61448 | 29 |
| AGACCGG | 135 | 0.0 | 33.332462 | 28 |
| TCGTATG | 120 | 0.0 | 31.874165 | 43 |
| CCGGACC | 130 | 0.0 | 31.153032 | 31 |
| GAGCGGT | 140 | 0.0 | 28.934868 | 6 |
| GCGGTTC | 140 | 0.0 | 28.92664 | 8 |
| CGTATGC | 135 | 0.0 | 28.332592 | 44 |
| TCTCGTA | 135 | 0.0 | 28.332592 | 41 |
| AGCGGTT | 145 | 0.0 | 27.929169 | 7 |
| GAGACCG | 180 | 0.0 | 26.249313 | 27 |
| AGAGCGG | 160 | 0.0 | 25.318008 | 5 |
| CCGAGAC | 170 | 0.0 | 25.146402 | 25 |
| AAGAGCG | 165 | 0.0 | 24.550797 | 4 |
| ATCTCGT | 170 | 0.0 | 23.822906 | 40 |
| CGGTTCA | 175 | 0.0 | 23.141312 | 9 |
| CGGAAGA | 195 | 0.0 | 21.934086 | 1 |
| ATGCCGA | 205 | 0.0 | 19.75478 | 22 |