Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390788.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 407816 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGCGC | 30 | 0.005147524 | 29.995094 | 9 |
| CGCCACC | 65 | 1.4995552E-5 | 24.274433 | 5 |
| CCGGGCG | 60 | 2.433874E-4 | 22.540545 | 1 |
| TGGTGCG | 50 | 0.0022658883 | 22.493563 | 30 |
| CGTTGGA | 60 | 0.006436197 | 18.783787 | 5 |
| CCACCGC | 75 | 0.0011097712 | 17.997057 | 7 |
| GCCACCG | 90 | 1.8364847E-4 | 17.531536 | 6 |
| CATGCCC | 105 | 3.1088275E-5 | 17.140055 | 11 |
| GCTAGAC | 110 | 4.637074E-5 | 16.358955 | 19 |
| ACTAGAC | 170 | 3.3987817E-8 | 15.877809 | 19 |
| CTAGACA | 305 | 0.0 | 14.749878 | 20 |
| CCGAGAT | 95 | 0.0053783474 | 14.206461 | 14 |
| ACCATGC | 175 | 8.146344E-7 | 14.140544 | 9 |
| CAAGGCA | 130 | 1.9260036E-4 | 13.842194 | 16 |
| GCTAGGA | 100 | 0.00755433 | 13.496138 | 34 |
| CCACCAT | 250 | 2.8982322E-7 | 11.698088 | 7 |
| GCCACCA | 330 | 6.020855E-10 | 11.611796 | 6 |
| CCATGCC | 220 | 1.0565824E-5 | 11.24816 | 10 |
| GGAATAA | 145 | 0.006826316 | 10.858961 | 29 |
| CCCTTCT | 145 | 0.006826316 | 10.858961 | 44 |