Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379062.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 773434 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATCGCAA | 25 | 0.002106936 | 35.999123 | 9 |
| CGTTCGA | 40 | 6.1651866E-4 | 28.124313 | 32 |
| GATCGGA | 50 | 7.156613E-5 | 26.99934 | 18 |
| AGACCGT | 50 | 7.156613E-5 | 26.99934 | 28 |
| ATCGCGC | 45 | 0.0012254422 | 25.002623 | 5 |
| GCGCTTT | 45 | 0.0012263663 | 24.99939 | 35 |
| CCGTTCG | 45 | 0.0012263663 | 24.99939 | 31 |
| GATCGCG | 50 | 0.0022625658 | 22.50236 | 4 |
| ATCTCGT | 60 | 2.4669047E-4 | 22.49945 | 40 |
| AGATCGG | 60 | 2.4669047E-4 | 22.49945 | 17 |
| CCGGCTA | 75 | 4.601E-5 | 20.999487 | 16 |
| TCTCGTA | 55 | 0.003935949 | 20.454046 | 41 |
| ACCGTTC | 55 | 0.003935949 | 20.454046 | 30 |
| AGAGCGA | 80 | 7.560333E-5 | 19.68702 | 35 |
| CGTATGC | 70 | 6.9817883E-4 | 19.285244 | 44 |
| AGCGCTC | 75 | 0.0011099591 | 17.99956 | 7 |
| CGCCACT | 90 | 1.8650295E-4 | 17.499573 | 9 |
| CGCCACC | 120 | 5.163536E-6 | 16.87677 | 5 |
| ATCGGAA | 80 | 0.0017104415 | 16.874588 | 19 |
| GCGACAG | 95 | 2.818385E-4 | 16.578543 | 30 |