Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379333.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 237670 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 30 | 2.155919E-6 | 45.006943 | 41 |
| CGTATGC | 30 | 2.1590458E-6 | 44.99748 | 44 |
| GACCGTT | 30 | 2.1590458E-6 | 44.99748 | 29 |
| TCGTATG | 30 | 2.1590458E-6 | 44.99748 | 43 |
| CCGTTTA | 30 | 2.1590458E-6 | 44.99748 | 31 |
| CTCGTAT | 35 | 6.2208E-6 | 38.57738 | 42 |
| GCGGTTC | 35 | 6.229797E-6 | 38.569263 | 8 |
| AGACCGT | 35 | 6.229797E-6 | 38.569263 | 28 |
| CGTTTAG | 45 | 8.6651744E-7 | 34.99804 | 32 |
| GAGACCG | 40 | 1.55598E-5 | 33.748108 | 27 |
| CCGAGAC | 40 | 1.55598E-5 | 33.748108 | 25 |
| ACCGTTT | 40 | 1.55598E-5 | 33.748108 | 30 |
| CGCAGTT | 30 | 0.00512998 | 30.010946 | 1 |
| CATCTCG | 45 | 3.475658E-5 | 30.004631 | 39 |
| AGCGGTT | 45 | 3.4806566E-5 | 29.99832 | 7 |
| GTATGCC | 45 | 3.4806566E-5 | 29.99832 | 45 |
| AGAGCGG | 45 | 3.4806566E-5 | 29.99832 | 5 |
| ATCTCGT | 50 | 7.1274364E-5 | 27.004168 | 40 |
| AAGAGCG | 50 | 7.137658E-5 | 26.998486 | 4 |
| CGGTTCA | 50 | 7.137658E-5 | 26.998486 | 9 |