Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379275.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 729067 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATAA | 80 | 1.0527765E-7 | 25.312267 | 10 |
| TCGTATA | 85 | 1.89184E-7 | 23.82331 | 9 |
| TTCGTAT | 90 | 3.2838216E-7 | 22.499794 | 8 |
| CGCTCCA | 85 | 5.0284416E-6 | 21.176277 | 9 |
| ACGCCCG | 55 | 0.003935388 | 20.454357 | 12 |
| CTTCGTA | 100 | 9.04638E-7 | 20.249815 | 7 |
| CACGCCC | 125 | 3.8288272E-7 | 17.999834 | 11 |
| ATCTTCG | 115 | 3.445466E-6 | 17.608534 | 5 |
| ACCACGC | 145 | 9.6541044E-8 | 17.06881 | 9 |
| CCACGCC | 160 | 2.958932E-7 | 15.468608 | 10 |
| ACGCCCA | 95 | 0.0053738444 | 14.210397 | 12 |
| TCTTCGT | 145 | 3.101561E-5 | 13.965389 | 6 |
| CACCACG | 200 | 2.486031E-7 | 13.499877 | 8 |
| CGCCACC | 150 | 4.2666805E-5 | 13.499876 | 5 |
| TCTCGAT | 125 | 0.0022503065 | 12.599884 | 27 |
| ACGGGGT | 135 | 0.004002904 | 11.667359 | 2 |
| CTCGATC | 140 | 0.0052533727 | 11.249897 | 28 |
| GGTCTCG | 300 | 2.6790622E-7 | 10.499904 | 25 |
| GCCACCA | 515 | 0.0 | 10.48534 | 6 |
| CTCGTGA | 195 | 4.9101165E-4 | 10.384521 | 42 |