Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390750.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1060327 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCGGA | 55 | 4.1756957E-6 | 28.62652 | 18 |
| CTCGTAT | 55 | 1.3713009E-4 | 24.537018 | 42 |
| GACCGTC | 55 | 1.3713009E-4 | 24.537018 | 29 |
| CGTCTAT | 65 | 1.5276682E-5 | 24.222439 | 32 |
| AGATCGG | 75 | 1.702525E-6 | 23.991749 | 17 |
| CGTATGC | 75 | 1.702525E-6 | 23.991749 | 44 |
| CGTTGAA | 50 | 0.002269023 | 22.492266 | 12 |
| CCGTCTA | 70 | 2.7099248E-5 | 22.492266 | 31 |
| TCGGAAG | 70 | 2.7099248E-5 | 22.492266 | 20 |
| ATCGGAA | 75 | 4.614408E-5 | 20.99278 | 19 |
| AGACCGT | 65 | 4.247776E-4 | 20.76209 | 28 |
| CGAAAGG | 90 | 8.09775E-6 | 20.04322 | 5 |
| GCGGTTC | 80 | 7.582299E-5 | 19.680733 | 28 |
| TATCTCG | 60 | 0.00651423 | 18.747974 | 9 |
| GAACCGC | 60 | 0.006523104 | 18.743555 | 12 |
| GAGACCG | 85 | 0.0025708787 | 15.876894 | 27 |
| TCGTATG | 85 | 0.0025708787 | 15.876894 | 43 |
| AGCGGTT | 100 | 4.1775714E-4 | 15.744586 | 27 |
| CCGAGAC | 105 | 6.052079E-4 | 14.994844 | 45 |
| CGGTTCA | 110 | 8.609943E-4 | 14.31326 | 29 |