Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379027.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1134957 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGCTAT | 65 | 9.094947E-12 | 38.074986 | 35 |
| GCGGTTC | 65 | 3.6743586E-10 | 34.615147 | 8 |
| CCGAGCG | 65 | 3.6743586E-10 | 34.613625 | 31 |
| CGAGCGC | 65 | 3.6743586E-10 | 34.613625 | 32 |
| CTCGTAT | 65 | 1.4042598E-8 | 31.15226 | 42 |
| TATCTCG | 65 | 1.4042598E-8 | 31.15226 | 39 |
| TCTCGTA | 65 | 1.4042598E-8 | 31.15226 | 41 |
| CGCTATC | 75 | 1.7043931E-9 | 29.998472 | 36 |
| ACCGAGC | 80 | 3.3978722E-9 | 28.123568 | 30 |
| GACCGAG | 85 | 6.4846972E-9 | 26.46924 | 29 |
| GAGCGCT | 85 | 6.4846972E-9 | 26.46924 | 33 |
| AGCGCTA | 85 | 6.4846972E-9 | 26.46924 | 34 |
| CGGTTCA | 95 | 7.421477E-10 | 26.051306 | 9 |
| CGTATGC | 80 | 1.05428626E-7 | 25.311213 | 44 |
| GAGCGGT | 100 | 1.3405952E-9 | 24.756374 | 6 |
| AGAGCGG | 95 | 2.1096639E-8 | 23.69031 | 5 |
| ATGCCGA | 110 | 4.0545274E-9 | 22.498856 | 22 |
| GCTCGCT | 50 | 0.0022652627 | 22.498856 | 25 |
| AGCGGTT | 105 | 6.1081664E-8 | 21.428425 | 7 |
| TCGTATG | 105 | 6.110895E-8 | 21.42748 | 43 |