Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379392.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1590062 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGGAT | 135 | 0.0 | 38.332714 | 30 |
| CTCGTAT | 145 | 0.0 | 37.24078 | 42 |
| TCTCGTA | 150 | 0.0 | 35.999424 | 41 |
| GACCGGA | 155 | 0.0 | 33.386562 | 29 |
| ATCTCGT | 170 | 0.0 | 33.087704 | 40 |
| CGTATGC | 170 | 0.0 | 33.087704 | 44 |
| CCGGATG | 160 | 0.0 | 32.34323 | 31 |
| TCGTATG | 185 | 0.0 | 29.18872 | 43 |
| CGGATGT | 190 | 0.0 | 28.420597 | 32 |
| AGACCGG | 185 | 0.0 | 27.972525 | 28 |
| GAGCGGT | 210 | 0.0 | 26.78781 | 6 |
| GCGGTTC | 220 | 0.0 | 25.567772 | 8 |
| CGGTTCA | 220 | 0.0 | 25.567772 | 9 |
| CCGAGAC | 210 | 0.0 | 24.64246 | 25 |
| AGCGGTT | 225 | 0.0 | 23.999617 | 7 |
| GAGACCG | 225 | 0.0 | 22.999632 | 27 |
| AGAGCGG | 245 | 0.0 | 22.043234 | 5 |
| AATGCCG | 245 | 0.0 | 22.040462 | 21 |
| AAGAGCG | 270 | 0.0 | 21.669044 | 4 |
| ATGCCGA | 250 | 0.0 | 21.599651 | 22 |