Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379049.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 827770 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGACCGT | 50 | 7.15628E-5 | 26.999855 | 28 |
| CCCGCCA | 95 | 2.104207E-8 | 23.694103 | 3 |
| CGCCCGC | 50 | 0.0022593841 | 22.508038 | 1 |
| GACCGTG | 50 | 0.0022641488 | 22.49988 | 29 |
| CGGTTCA | 50 | 0.0022649437 | 22.498522 | 9 |
| TCTCGTA | 50 | 0.0022649437 | 22.498522 | 41 |
| CTCGTAT | 55 | 0.0039371215 | 20.4532 | 42 |
| CCGCCAC | 130 | 5.75983E-7 | 17.31283 | 4 |
| GCCCGCC | 95 | 2.809197E-4 | 16.585873 | 2 |
| AGAAACG | 105 | 6.037343E-4 | 14.999013 | 39 |
| TCGTATA | 105 | 6.037343E-4 | 14.999013 | 9 |
| CGGGATT | 125 | 1.3804852E-4 | 14.399053 | 14 |
| GAAACGG | 195 | 1.8281935E-7 | 13.845243 | 10 |
| ATCTTCG | 115 | 0.0011985925 | 13.699716 | 5 |
| AGAGCGG | 100 | 0.007533868 | 13.504006 | 5 |
| CCACCGC | 100 | 0.0075489376 | 13.4999275 | 7 |
| GTTAGCC | 150 | 4.2703206E-5 | 13.499111 | 13 |
| ACGGGAT | 120 | 0.0016565464 | 13.124137 | 13 |
| GAGCCGA | 120 | 0.0016565464 | 13.124137 | 40 |
| CTTCGTA | 155 | 5.80626E-5 | 13.0644455 | 7 |