Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390650.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 536184 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATATCCG | 35 | 2.7779545E-4 | 32.222088 | 4 |
| ACCGATC | 35 | 2.8240107E-4 | 32.13193 | 30 |
| CTCGTAT | 35 | 2.8255567E-4 | 32.128937 | 42 |
| CGCATAT | 30 | 0.0051557473 | 29.987005 | 41 |
| CGCTAAT | 30 | 0.0051557473 | 29.987005 | 22 |
| ATCTCGT | 45 | 0.0012288004 | 24.989172 | 40 |
| GACCGAT | 50 | 0.0022675202 | 22.492353 | 29 |
| AGATCGG | 80 | 2.9786243E-6 | 22.492352 | 17 |
| CGTATGC | 50 | 0.0022687495 | 22.490255 | 44 |
| TCTCGTA | 50 | 0.0022687495 | 22.490255 | 41 |
| TCGTATG | 50 | 0.0022687495 | 22.490255 | 43 |
| TCGGAAG | 85 | 5.0428334E-6 | 21.1673 | 20 |
| CCGATCA | 55 | 0.003943724 | 20.445684 | 31 |
| CGATCAA | 55 | 0.003943724 | 20.445684 | 32 |
| ATCGGAA | 90 | 8.268673E-6 | 19.991337 | 19 |
| GATCGGA | 95 | 1.3186103E-5 | 18.939161 | 18 |
| AGACCGA | 60 | 0.0065188515 | 18.743628 | 28 |
| CGGGGTT | 100 | 2.0004893E-5 | 18.044369 | 3 |
| CCGAGAC | 105 | 3.1189935E-5 | 17.135431 | 45 |
| ACTAGAT | 95 | 2.825157E-4 | 16.571766 | 22 |