Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379241.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1320932 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CAGAGCG | 120 | 9.7553755E-5 | 14.999734 | 34 |
| CCGCACC | 110 | 8.590686E-4 | 14.317929 | 10 |
| CGTGAGC | 280 | 5.838956E-10 | 12.858376 | 1 |
| CGGAAGC | 145 | 4.8500943E-4 | 12.413574 | 25 |
| AGAGCGA | 145 | 4.8500943E-4 | 12.413574 | 35 |
| GAACCCG | 220 | 7.923136E-7 | 12.2725115 | 21 |
| ATGCCCG | 130 | 0.003022309 | 12.115171 | 12 |
| GAGCGAG | 150 | 6.451051E-4 | 11.999787 | 36 |
| GCGAGAC | 155 | 8.495072E-4 | 11.612698 | 38 |
| AACCCGG | 220 | 1.0598627E-5 | 11.249802 | 22 |
| GCCACCG | 220 | 1.0598627E-5 | 11.249802 | 6 |
| AGCGAGA | 190 | 3.8683586E-4 | 10.657707 | 37 |
| CCCGGGA | 255 | 4.6779423E-6 | 10.588048 | 24 |
| ACCCGGG | 235 | 2.2000584E-5 | 10.531729 | 23 |
| CCGGCTA | 150 | 0.008779396 | 10.499814 | 16 |
| TGCCCGG | 215 | 1.0380185E-4 | 10.4649315 | 13 |
| CCACGCC | 280 | 1.2573801E-6 | 10.446244 | 10 |
| CCACCGC | 175 | 0.0023390215 | 10.285533 | 7 |
| CCGGGAG | 315 | 5.248712E-7 | 9.999823 | 25 |
| CGGGGTT | 250 | 4.3432134E-5 | 9.9009495 | 1 |