Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379242.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1056587 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTAGACG | 60 | 2.467766E-4 | 22.499409 | 20 |
| GACGGAA | 85 | 5.0327217E-6 | 21.175913 | 23 |
| GCCGAAG | 60 | 0.0065111457 | 18.749506 | 44 |
| AGCGATT | 85 | 0.0025654319 | 15.881934 | 22 |
| CGGGGTT | 215 | 1.5279511E-10 | 15.70172 | 1 |
| CCGGCTA | 110 | 8.5892447E-4 | 14.317805 | 16 |
| ACGGAAG | 150 | 4.2709235E-5 | 13.499644 | 24 |
| CGGCTAA | 135 | 2.6522175E-4 | 13.332983 | 17 |
| GCCGAGA | 180 | 0.002954166 | 9.999738 | 42 |
| ACCACGC | 260 | 6.681601E-5 | 9.518981 | 9 |
| AGCCGAG | 190 | 0.0046188785 | 9.473435 | 41 |
| CTCCCGG | 190 | 0.0046188785 | 9.473435 | 43 |
| GAGCCGA | 190 | 0.0046188785 | 9.473435 | 40 |
| CCACGCC | 265 | 8.228257E-5 | 9.339377 | 10 |
| GTTAGCC | 195 | 0.0057207714 | 9.230526 | 15 |
| ACTAGAC | 355 | 2.6705711E-6 | 8.873006 | 19 |
| CACCACG | 260 | 6.9972494E-4 | 8.653619 | 8 |
| TCGCTTG | 300 | 3.1618745E-4 | 8.249783 | 15 |
| GCGTGGT | 255 | 0.0056396015 | 7.942847 | 4 |
| GGCGTGG | 285 | 0.0017324339 | 7.896398 | 3 |