Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390661.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1086605 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCGGA | 50 | 1.9847776E-6 | 31.493301 | 18 |
| GCGGTTC | 70 | 2.7082247E-5 | 22.494179 | 28 |
| CGATCCC | 55 | 0.0039423043 | 20.449253 | 30 |
| GGGTGCG | 85 | 1.1906709E-4 | 18.557066 | 3 |
| AGATCGG | 85 | 1.2063297E-4 | 18.52547 | 17 |
| ATCGGAA | 85 | 1.2063297E-4 | 18.52547 | 19 |
| AGCGGTT | 100 | 2.0510271E-5 | 17.995344 | 27 |
| GAGCGGT | 90 | 1.8692526E-4 | 17.495474 | 26 |
| CGGGATT | 175 | 2.6975613E-9 | 16.71073 | 14 |
| AGTGGCG | 165 | 2.3637767E-8 | 16.360155 | 10 |
| AAGAGCG | 110 | 4.6474233E-5 | 16.359404 | 24 |
| ACCACGC | 195 | 1.1295924E-8 | 14.99681 | 9 |
| CCGAGAC | 135 | 1.5852678E-5 | 14.996119 | 45 |
| ATCTTCG | 125 | 1.3624105E-4 | 14.422155 | 5 |
| ACGCCCA | 110 | 8.604643E-4 | 14.314478 | 12 |
| TCGGAAG | 110 | 8.604643E-4 | 14.314478 | 20 |
| ACGGGAT | 160 | 5.0366325E-6 | 14.059507 | 13 |
| CCTTCGT | 145 | 3.05809E-5 | 13.98765 | 1 |
| TTCGTTG | 230 | 6.528353E-9 | 13.716092 | 3 |
| CGCCTCG | 100 | 0.007561296 | 13.497129 | 37 |