Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379303.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 512718 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGGT | 40 | 3.4537516E-7 | 39.37423 | 29 |
| AGACCGG | 55 | 2.743036E-9 | 36.817463 | 28 |
| CTCGTAT | 45 | 8.6887485E-7 | 34.999317 | 42 |
| CCGGTTG | 45 | 8.6887485E-7 | 34.999317 | 31 |
| AAGAGCG | 50 | 1.9775835E-6 | 31.502459 | 4 |
| CGGTTGG | 50 | 1.9790896E-6 | 31.499386 | 32 |
| TCGTATG | 50 | 1.9790896E-6 | 31.499386 | 43 |
| CGTATGC | 55 | 4.159656E-6 | 28.635805 | 44 |
| GCGGTTC | 55 | 4.159656E-6 | 28.635805 | 8 |
| AGCGGTT | 55 | 4.159656E-6 | 28.635805 | 7 |
| AATGCCG | 55 | 4.159656E-6 | 28.635805 | 21 |
| GAGCGGT | 55 | 4.159656E-6 | 28.635805 | 6 |
| ATGCCGA | 55 | 4.159656E-6 | 28.635805 | 22 |
| AGAGCGG | 60 | 8.175031E-6 | 26.252047 | 5 |
| ACCGGTT | 60 | 8.181225E-6 | 26.249489 | 30 |
| TGCCGAG | 60 | 8.181225E-6 | 26.249489 | 23 |
| TCTCGTA | 65 | 1.5218429E-5 | 24.230295 | 41 |
| GAGACCG | 75 | 1.6948779E-6 | 23.99953 | 27 |
| GTATGCC | 75 | 1.6948779E-6 | 23.99953 | 45 |
| CGGAAGA | 70 | 2.6915013E-5 | 22.50834 | 1 |