Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379038.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 749538 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 30 | 2.1652395E-6 | 44.99773 | 41 |
| ATTACGA | 25 | 0.0021071627 | 35.998188 | 9 |
| CCGCTAT | 40 | 1.560384E-5 | 33.748295 | 31 |
| CTCGTAT | 50 | 1.9811814E-6 | 31.498413 | 42 |
| ACCGCTA | 45 | 3.4904406E-5 | 29.99849 | 30 |
| AGACCGC | 45 | 3.4904406E-5 | 29.99849 | 28 |
| TCGTATG | 45 | 3.4904406E-5 | 29.99849 | 43 |
| GACCGCT | 50 | 7.1575865E-5 | 26.99864 | 29 |
| CGCTATA | 50 | 7.1575865E-5 | 26.99864 | 32 |
| ATCTCGT | 55 | 1.3680503E-4 | 24.544218 | 40 |
| CATCTCG | 60 | 2.4672403E-4 | 22.498865 | 39 |
| CGTATGC | 70 | 6.982737E-4 | 19.284742 | 44 |
| AGCGGTT | 70 | 6.982737E-4 | 19.284742 | 7 |
| AATGCCG | 85 | 1.20419674E-4 | 18.528477 | 21 |
| CCTTCGT | 110 | 2.2434579E-6 | 18.417994 | 1 |
| GCGGTTC | 75 | 0.0011101088 | 17.999094 | 8 |
| CCGGCTA | 75 | 0.0011101088 | 17.999094 | 16 |
| GAGACCG | 75 | 0.0011101088 | 17.999094 | 27 |
| AAGAGCG | 80 | 0.0017076202 | 16.878653 | 4 |
| GAGCGGT | 80 | 0.0017076202 | 16.878653 | 6 |