Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378699.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1186351 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGTAGT | 90 | 0.0 | 35.00167 | 31 |
| CGTATGC | 95 | 0.0 | 33.15808 | 44 |
| GAGCGGT | 110 | 0.0 | 30.684578 | 6 |
| CTCGTAT | 105 | 0.0 | 30.00017 | 42 |
| GACCGTA | 105 | 0.0 | 30.00017 | 29 |
| ACCGTAG | 105 | 0.0 | 30.00017 | 30 |
| TCGTATG | 120 | 0.0 | 28.125158 | 43 |
| CGTAGTT | 115 | 0.0 | 27.392612 | 32 |
| AATGCCG | 110 | 5.456968E-12 | 26.589937 | 21 |
| GCGGTTC | 110 | 5.456968E-12 | 26.588816 | 8 |
| TCTCGTA | 120 | 0.0 | 26.250149 | 41 |
| GAGACCG | 120 | 0.0 | 26.249043 | 27 |
| AGCGGTT | 120 | 0.0 | 26.247936 | 7 |
| CGGTTCA | 115 | 9.094947E-12 | 25.43278 | 9 |
| AGAGCGG | 130 | 1.8189894E-12 | 24.232948 | 5 |
| ATGCCGA | 125 | 2.910383E-11 | 23.399145 | 22 |
| AGACCGT | 135 | 3.6379788E-12 | 23.333464 | 28 |
| AAGAGCG | 140 | 5.456968E-12 | 22.502024 | 4 |
| ACCCACG | 60 | 2.466776E-4 | 22.501076 | 34 |
| CGGAAGA | 160 | 1.8189894E-12 | 21.097425 | 1 |