Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378678.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 744483 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 50 | 1.0804797E-9 | 40.500122 | 41 |
| CGTATGC | 55 | 2.746674E-9 | 36.818295 | 44 |
| TATCTCG | 55 | 2.746674E-9 | 36.818295 | 39 |
| GACCGTT | 55 | 1.126773E-7 | 32.72737 | 29 |
| CTCGTAT | 70 | 8.1308826E-10 | 32.142956 | 42 |
| ACCGTTG | 70 | 2.8832801E-8 | 28.92866 | 30 |
| GCGGTTC | 80 | 1.0547774E-7 | 25.307474 | 8 |
| CGGTTCA | 80 | 1.0547774E-7 | 25.307474 | 9 |
| AGAGCGG | 85 | 1.8868195E-7 | 23.830004 | 5 |
| CGTTGTG | 85 | 1.8917308E-7 | 23.8236 | 32 |
| TCGTATG | 85 | 1.8917308E-7 | 23.8236 | 43 |
| CCGTTGT | 95 | 2.1127562E-8 | 23.684282 | 31 |
| ATCTCGT | 100 | 3.6397978E-8 | 22.500069 | 40 |
| GAGCGGT | 95 | 5.5119017E-7 | 21.321583 | 6 |
| GAGACCG | 90 | 8.24462E-6 | 20.000061 | 27 |
| AGCGGTT | 115 | 1.5967817E-7 | 19.561335 | 7 |
| CGGAAGA | 130 | 2.7470378E-8 | 19.051315 | 1 |
| AGACCGT | 95 | 1.3147801E-5 | 18.947426 | 28 |
| CCGAGAC | 95 | 1.3147801E-5 | 18.947426 | 25 |
| TGCCGAG | 95 | 1.3147801E-5 | 18.947426 | 23 |