Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379063.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 895359 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGTCCG | 70 | 0.0 | 38.56975 | 32 |
| ACCGGTC | 65 | 9.094947E-12 | 38.07527 | 30 |
| GACCGGT | 60 | 1.546141E-10 | 37.49837 | 29 |
| GCCGTCG | 25 | 0.0021073096 | 35.998436 | 12 |
| CCGGTCC | 80 | 3.6379788E-12 | 33.748535 | 31 |
| CTCGTAT | 75 | 4.7293724E-11 | 32.99857 | 42 |
| TCGTATG | 75 | 4.7293724E-11 | 32.99857 | 43 |
| GGTCCGC | 80 | 1.0004442E-10 | 30.93616 | 33 |
| TCTCGTA | 80 | 1.0004442E-10 | 30.93616 | 41 |
| GTCCGCA | 85 | 2.0372681E-10 | 29.11638 | 34 |
| AGACCGG | 90 | 1.1908924E-8 | 24.998913 | 28 |
| CGTATGC | 100 | 1.3442332E-9 | 24.748924 | 44 |
| CATCTCG | 100 | 1.3442332E-9 | 24.748924 | 39 |
| CCGAGAC | 95 | 2.1151209E-8 | 23.68318 | 25 |
| CGCATCT | 105 | 2.3665052E-9 | 23.570404 | 37 |
| TCCGCAT | 110 | 4.0508894E-9 | 22.499022 | 35 |
| AGCGGTT | 110 | 4.0508894E-9 | 22.499022 | 7 |
| CGGTTCA | 115 | 6.7666406E-9 | 21.520803 | 9 |
| GAGACCG | 105 | 6.106893E-8 | 21.42764 | 27 |
| AGAGCGG | 120 | 1.1028533E-8 | 20.62756 | 5 |