Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379362.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1394563 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 175 | 0.0 | 37.285477 | 41 |
| ACCGATC | 175 | 0.0 | 35.99977 | 30 |
| CGTATGC | 195 | 0.0 | 34.615166 | 44 |
| GACCGAT | 185 | 0.0 | 32.837627 | 29 |
| GAGACCG | 185 | 0.0 | 32.837627 | 27 |
| ATCTCGT | 215 | 0.0 | 31.395147 | 40 |
| AGACCGA | 195 | 0.0 | 31.153648 | 28 |
| CTCGTAT | 215 | 0.0 | 30.348642 | 42 |
| CGGTTCA | 215 | 0.0 | 30.348642 | 9 |
| AATGCCG | 215 | 0.0 | 30.348642 | 21 |
| CCGAGAC | 210 | 0.0 | 29.999807 | 25 |
| GAGCGGT | 220 | 0.0 | 29.659964 | 6 |
| CGATCGA | 215 | 0.0 | 29.302137 | 32 |
| TCGTATG | 225 | 0.0 | 28.999813 | 43 |
| GCGGTTC | 230 | 0.0 | 28.369385 | 8 |
| AGAGCGG | 240 | 0.0 | 28.125828 | 5 |
| CCGATCG | 230 | 0.0 | 27.39113 | 31 |
| AAGAGCG | 240 | 0.0 | 27.188301 | 4 |
| AGCGGTT | 240 | 0.0 | 27.187325 | 7 |
| TCGAGAT | 250 | 0.0 | 26.099834 | 35 |