Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379292.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 415074 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GAGACCG | 30 | 0.0051445235 | 29.998798 | 27 |
| CCTTCGT | 60 | 0.006500635 | 18.751509 | 1 |
| GTCCACT | 100 | 0.007542346 | 13.499457 | 19 |
| ACTAGAC | 140 | 3.5990344E-4 | 12.8566265 | 19 |
| GCACTCC | 160 | 7.801683E-5 | 12.655742 | 16 |
| ACTGCAC | 170 | 1.374205E-4 | 11.911286 | 13 |
| TGCACTC | 185 | 3.0140605E-4 | 10.945507 | 15 |
| GTCTTGA | 150 | 0.008763841 | 10.499578 | 25 |
| GCCACCA | 260 | 5.8691294E-6 | 10.384198 | 6 |
| TATCTTC | 340 | 1.3854333E-7 | 9.926072 | 4 |
| CCTCAAA | 235 | 0.0026955868 | 8.617714 | 1 |
| AAGCATT | 320 | 6.8263E-5 | 8.437161 | 28 |
| GGTGGCT | 270 | 0.0010147368 | 8.332998 | 9 |
| CTAGACA | 245 | 0.00393308 | 8.264974 | 20 |
| AGCATTC | 330 | 9.775772E-5 | 8.18149 | 29 |
| TCCACTT | 360 | 3.0332883E-5 | 8.124674 | 11 |
| GAGTGTT | 305 | 3.759296E-4 | 8.115406 | 43 |
| CCACCAC | 335 | 1.1645858E-4 | 8.059378 | 7 |
| GCATTCT | 280 | 0.0014540058 | 8.035392 | 30 |
| GCTAATT | 280 | 0.0014540058 | 8.035392 | 19 |