Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379074.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 665194 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGGAC | 95 | 0.0 | 40.260735 | 30 |
| CCGGACG | 90 | 0.0 | 39.997593 | 31 |
| CGGACGG | 100 | 0.0 | 35.997833 | 32 |
| TCTCGTA | 110 | 0.0 | 34.770634 | 41 |
| GACCGGA | 115 | 0.0 | 33.25887 | 29 |
| AGACCGG | 115 | 0.0 | 33.25887 | 28 |
| CGGTTCA | 125 | 0.0 | 32.398052 | 9 |
| GCGGTTC | 120 | 0.0 | 31.877876 | 8 |
| ATCTCGT | 120 | 0.0 | 31.873081 | 40 |
| CCGAGAC | 120 | 0.0 | 31.873081 | 25 |
| CTCGTAT | 125 | 0.0 | 30.59816 | 42 |
| GAGCGGT | 130 | 0.0 | 29.430157 | 6 |
| TCGTATG | 130 | 0.0 | 29.421309 | 43 |
| CGGAATC | 125 | 0.0 | 28.79827 | 36 |
| AGCGGTT | 135 | 0.0 | 28.335892 | 7 |
| GAGACCG | 135 | 0.0 | 28.331629 | 27 |
| AGAGCGG | 140 | 0.0 | 27.328003 | 5 |
| CGTATGC | 140 | 0.0 | 27.319786 | 44 |
| GGACGGA | 135 | 0.0 | 26.665064 | 33 |
| TGCCGAG | 145 | 0.0 | 26.377724 | 23 |