Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390592.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 322128 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGGAAG | 30 | 0.005144252 | 29.997103 | 24 |
| CGGCTCA | 90 | 0.0037485214 | 14.998551 | 23 |
| TCGGCTC | 95 | 0.005368347 | 14.209154 | 22 |
| ACTAGAC | 145 | 4.8356949E-4 | 12.412594 | 19 |
| CAGCATT | 180 | 2.3362532E-4 | 11.248914 | 30 |
| GTTGGCC | 140 | 0.00524598 | 11.248914 | 13 |
| TAGACAG | 235 | 2.1878039E-5 | 10.530898 | 22 |
| GTTTCAC | 195 | 4.8701456E-4 | 10.390063 | 3 |
| CTAGACA | 220 | 1.3039651E-4 | 10.226285 | 21 |
| GAAGCAT | 220 | 1.3039651E-4 | 10.226285 | 27 |
| GACAGAA | 315 | 5.201382E-7 | 9.999035 | 24 |
| AGCATTC | 250 | 4.3247303E-5 | 9.899044 | 29 |
| CTGCTGT | 185 | 0.0036963606 | 9.728789 | 13 |
| AGTGCAG | 210 | 9.622952E-4 | 9.647917 | 5 |
| GGAGTGC | 235 | 2.519597E-4 | 9.579491 | 3 |
| ACAGAAG | 235 | 2.5353866E-4 | 9.573544 | 25 |
| ACTGCAA | 265 | 8.187014E-5 | 9.338721 | 29 |
| CTGGAGT | 290 | 2.1003427E-5 | 9.325369 | 1 |
| GAGTGCA | 245 | 3.8272192E-4 | 9.188492 | 4 |
| CAGAAGC | 245 | 3.8511076E-4 | 9.182787 | 26 |