Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378707.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 753514 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 25 | 3.8895225E-5 | 45.0 | 44 |
| TCGTATG | 30 | 1.1395486E-4 | 37.500004 | 43 |
| GCGTTAT | 30 | 0.0051461463 | 30.000002 | 36 |
| CCCGTGA | 30 | 0.0051461463 | 30.000002 | 18 |
| GCGGTTC | 40 | 6.1641575E-4 | 28.125 | 8 |
| ACCGAGT | 40 | 6.1641575E-4 | 28.125 | 30 |
| CTCGTAT | 45 | 0.0012261628 | 25.0 | 42 |
| ATCTCGT | 50 | 0.002263892 | 22.5 | 40 |
| AGCGGTT | 50 | 0.002263892 | 22.5 | 7 |
| TCTCGTA | 50 | 0.002263892 | 22.5 | 41 |
| CCGAGAC | 65 | 4.236364E-4 | 20.769232 | 25 |
| CGGTTCA | 55 | 0.0039352984 | 20.454546 | 9 |
| CGTTATT | 60 | 0.006508463 | 18.750002 | 37 |
| GAGACCG | 60 | 0.006508463 | 18.750002 | 27 |
| AGACCGA | 60 | 0.006508463 | 18.750002 | 28 |
| ATGCCGA | 60 | 0.006508463 | 18.750002 | 22 |
| TCGTATA | 75 | 0.0011097409 | 18.0 | 10 |
| TTCGAGA | 105 | 3.1101223E-5 | 17.142859 | 43 |
| CGCCACT | 85 | 0.0025640656 | 15.882353 | 9 |
| GTATGCC | 105 | 6.033438E-4 | 15.000001 | 45 |