Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390784.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 765852 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATCGGAA | 55 | 1.1298289E-7 | 32.71754 | 19 |
| ATAGACG | 30 | 0.0051520444 | 29.993032 | 36 |
| GATCGGA | 60 | 2.4235123E-7 | 29.991076 | 18 |
| AGATCGG | 75 | 1.7008115E-6 | 23.99286 | 17 |
| CCCGCCA | 100 | 3.5743142E-8 | 22.538927 | 3 |
| ACCGGAT | 60 | 2.470345E-4 | 22.494774 | 30 |
| GACCGGA | 60 | 2.470345E-4 | 22.494774 | 29 |
| TCGGAAG | 80 | 2.9802904E-6 | 22.493309 | 20 |
| CGTATGC | 70 | 2.7090528E-5 | 22.49184 | 44 |
| CTCGTAT | 75 | 4.608295E-5 | 20.995125 | 42 |
| TCTCGTA | 75 | 4.608295E-5 | 20.995125 | 41 |
| CTTCGTT | 110 | 9.786163E-8 | 20.491276 | 2 |
| GCGTGCC | 55 | 0.0038946706 | 20.491276 | 2 |
| CAACCCG | 55 | 0.003939161 | 20.451134 | 10 |
| CCGCCAC | 130 | 2.714296E-8 | 19.0714 | 4 |
| CCTTCGT | 120 | 2.447341E-7 | 18.783669 | 1 |
| CGTGCCA | 75 | 0.0010969632 | 18.031141 | 3 |
| TCGTATG | 90 | 1.8698307E-4 | 17.493654 | 43 |
| CCGAGAC | 130 | 5.798356E-7 | 17.301416 | 45 |
| AACGAAA | 105 | 3.1146876E-5 | 17.139996 | 8 |