Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390643.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1370932 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGAAGT | 70 | 9.335763E-7 | 25.706055 | 32 |
| CTCGTAT | 70 | 9.335763E-7 | 25.706055 | 42 |
| AGATCGG | 110 | 1.5279511E-10 | 24.537596 | 17 |
| CCCGCCA | 140 | 0.0 | 24.155811 | 3 |
| GACCGGA | 80 | 2.9837302E-6 | 22.492798 | 29 |
| CCGCCAC | 175 | 0.0 | 21.901268 | 4 |
| TCTCGTA | 85 | 5.0473554E-6 | 21.169691 | 41 |
| CGCCACC | 185 | 0.0 | 20.717417 | 5 |
| AACGAGT | 55 | 0.0038911977 | 20.495838 | 4 |
| CTATCGC | 55 | 0.003943394 | 20.448742 | 38 |
| GATCGGA | 125 | 1.774606E-8 | 19.793663 | 18 |
| TCGGAAG | 125 | 1.774606E-8 | 19.793663 | 20 |
| ATCTCGT | 105 | 1.450424E-6 | 19.279541 | 40 |
| ATCGGAA | 140 | 3.101377E-9 | 19.279541 | 19 |
| CGAGTTT | 60 | 0.006433034 | 18.789227 | 1 |
| GTCGGGA | 60 | 0.006521796 | 18.74468 | 35 |
| GGTGCGA | 60 | 0.006523169 | 18.743998 | 13 |
| CGCCCGC | 90 | 1.8364217E-4 | 17.536612 | 1 |
| ACGCCCG | 90 | 1.8705823E-4 | 17.494398 | 12 |
| ACCGGAA | 105 | 3.1216958E-5 | 17.13737 | 30 |