Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379230.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 794233 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGGT | 30 | 1.1399423E-4 | 37.49811 | 29 |
| TCTCGTA | 30 | 1.1399423E-4 | 37.49811 | 41 |
| ACCGGTA | 35 | 2.820431E-4 | 32.14124 | 30 |
| CGTATGC | 35 | 2.820431E-4 | 32.14124 | 44 |
| AGAGCGG | 40 | 6.157191E-4 | 28.130667 | 5 |
| CTCGTAT | 40 | 6.166268E-4 | 28.123585 | 42 |
| GCGGTTC | 40 | 6.166268E-4 | 28.123585 | 8 |
| CGGTAAC | 40 | 6.166268E-4 | 28.123585 | 32 |
| CGGTTCA | 45 | 0.0012265813 | 24.998741 | 9 |
| GAGCGGT | 45 | 0.0012265813 | 24.998741 | 6 |
| AACGATC | 45 | 0.0012265813 | 24.998741 | 36 |
| CCGGTAA | 45 | 0.0012265813 | 24.998741 | 31 |
| CGGAAGA | 70 | 2.6895674E-5 | 22.51304 | 1 |
| GTAACGA | 50 | 0.0022646612 | 22.498867 | 34 |
| GGTAACG | 55 | 0.003936631 | 20.453516 | 33 |
| CGAGTCC | 55 | 0.003936631 | 20.453516 | 19 |
| AGCGGTT | 55 | 0.003936631 | 20.453516 | 7 |
| AGACCGG | 55 | 0.003936631 | 20.453516 | 28 |
| GGCGACA | 70 | 6.962549E-4 | 19.293245 | 4 |
| AAGAGCG | 60 | 0.006494112 | 18.757322 | 4 |