Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390674.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 845283 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGAGAC | 80 | 7.576491E-5 | 19.68191 | 45 |
| CACGCCC | 70 | 6.989164E-4 | 19.28252 | 11 |
| AAAGCGC | 115 | 3.3939214E-6 | 17.637081 | 5 |
| AAGCGCT | 120 | 5.0911603E-6 | 16.902205 | 6 |
| AGCGCTC | 100 | 4.1669115E-4 | 15.749255 | 7 |
| CGCCACC | 175 | 8.0140853E-7 | 14.165655 | 5 |
| CGGGGTT | 180 | 1.1040265E-6 | 13.768901 | 1 |
| CCCGCCA | 150 | 4.213131E-5 | 13.518558 | 3 |
| CAAAGCG | 120 | 0.0016372724 | 13.144601 | 4 |
| CCGCCAC | 155 | 5.7255405E-5 | 13.084025 | 4 |
| TTCACCG | 125 | 0.002251465 | 12.599403 | 7 |
| CGCTCCA | 125 | 0.002251465 | 12.599403 | 9 |
| GCGCCTG | 130 | 0.0030267928 | 12.111944 | 16 |
| GACAGTA | 135 | 0.004012316 | 11.664044 | 40 |
| CCACGCC | 175 | 1.8041776E-4 | 11.57088 | 10 |
| ACCACGC | 165 | 0.0014325681 | 10.908575 | 9 |
| ACCCGGG | 165 | 0.001434692 | 10.906639 | 40 |
| CGTTTCC | 170 | 0.0018156845 | 10.602791 | 1 |
| GAACCCG | 180 | 0.002957986 | 9.997752 | 38 |
| TAGTCCC | 270 | 9.258118E-6 | 9.997752 | 23 |