Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379344.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 2182383 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TATCTCG | 95 | 7.4396667E-10 | 26.051743 | 39 |
| AGACCGC | 120 | 1.10703695E-8 | 20.624296 | 28 |
| TCGTATG | 145 | 2.1827873E-10 | 20.173111 | 43 |
| CTCGTAT | 125 | 1.7687853E-8 | 19.800686 | 42 |
| GACCGCT | 125 | 1.7702405E-8 | 19.799326 | 29 |
| CGCTGTA | 125 | 1.7702405E-8 | 19.799326 | 32 |
| CGTATGC | 135 | 4.2757165E-8 | 18.33397 | 44 |
| CCGAGAC | 155 | 1.0919393E-8 | 17.418762 | 25 |
| CCGCTGT | 145 | 9.683026E-8 | 17.068382 | 31 |
| TCTCGTA | 145 | 9.683026E-8 | 17.068382 | 41 |
| ACCGCTG | 175 | 2.6957423E-9 | 16.713715 | 30 |
| GCGGTTC | 150 | 1.4249963E-7 | 16.499437 | 8 |
| AGCGGTT | 165 | 4.2064312E-7 | 14.999488 | 7 |
| AATGCCG | 165 | 4.2064312E-7 | 14.999488 | 21 |
| AGAGCGG | 185 | 9.60481E-8 | 14.597107 | 5 |
| ATCTCGT | 170 | 5.896927E-7 | 14.558327 | 40 |
| CGGTTCA | 175 | 8.181396E-7 | 14.142375 | 9 |
| CGGAAGA | 195 | 1.824992E-7 | 13.850124 | 1 |
| GAGCGGT | 195 | 1.8306127E-7 | 13.846633 | 6 |
| ACGCCCG | 165 | 6.9186462E-6 | 13.635898 | 12 |