Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379278.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 484774 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGAAA | 40 | 3.453133E-7 | 39.37437 | 34 |
| CCGACCG | 40 | 3.453133E-7 | 39.37437 | 31 |
| CGTATGC | 45 | 8.6872205E-7 | 34.99944 | 44 |
| CTCGTAT | 45 | 8.6872205E-7 | 34.99944 | 42 |
| GACCGAA | 45 | 8.6872205E-7 | 34.99944 | 33 |
| CGACCGA | 45 | 8.6872205E-7 | 34.99944 | 32 |
| TCGTATG | 45 | 8.6872205E-7 | 34.99944 | 43 |
| GACCGAC | 50 | 1.9787421E-6 | 31.499493 | 29 |
| GAGCGGT | 50 | 1.9787421E-6 | 31.499493 | 6 |
| TCTCGTA | 50 | 1.9787421E-6 | 31.499493 | 41 |
| AGACCGA | 50 | 1.9787421E-6 | 31.499493 | 28 |
| GCGGTTC | 60 | 2.4144356E-7 | 29.99952 | 8 |
| AGCGGTT | 60 | 2.4144356E-7 | 29.99952 | 7 |
| ACCGACC | 55 | 4.1589283E-6 | 28.635904 | 30 |
| CCGAAAT | 60 | 8.179801E-6 | 26.249578 | 35 |
| AGAGCGG | 60 | 8.179801E-6 | 26.249578 | 5 |
| AATGCCG | 65 | 1.5215794E-5 | 24.230381 | 21 |
| CCGAGAC | 65 | 1.5215794E-5 | 24.230381 | 25 |
| CGGTTCA | 75 | 4.596152E-5 | 20.999662 | 9 |
| TGCCGAG | 75 | 4.596152E-5 | 20.999662 | 23 |