Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390597.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 437394 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGCTAT | 30 | 0.005148417 | 29.99451 | 31 |
| TCGGAAG | 45 | 0.0012266473 | 24.995426 | 20 |
| ACCCCGT | 75 | 4.6007448E-5 | 20.996159 | 32 |
| CGTGAGC | 85 | 1.18197306E-4 | 18.570608 | 1 |
| AACCCCG | 85 | 1.2039642E-4 | 18.526022 | 31 |
| ATCTTCG | 95 | 2.7913498E-4 | 16.596786 | 5 |
| CCCCGTC | 85 | 0.0025648875 | 15.879448 | 33 |
| CCACGCC | 85 | 0.0025648875 | 15.879448 | 10 |
| ACTTGCC | 90 | 0.0037535364 | 14.997255 | 8 |
| ACTAGAC | 230 | 4.2200554E-10 | 14.672906 | 19 |
| GCCCGGC | 130 | 1.9229548E-4 | 13.845203 | 14 |
| TGAGCCG | 115 | 0.0012013522 | 13.693148 | 45 |
| TCTTCGT | 100 | 0.0075503234 | 13.497531 | 6 |
| TTCGTAT | 100 | 0.0075503234 | 13.497531 | 8 |
| ACCACGC | 100 | 0.0075503234 | 13.497531 | 9 |
| GAGCCAC | 285 | 1.0180884E-8 | 11.854848 | 4 |
| CTGACCA | 135 | 0.004005775 | 11.664532 | 38 |
| GTTGGCC | 180 | 2.3392867E-4 | 11.249228 | 13 |
| AACTAGA | 305 | 2.820525E-8 | 11.064814 | 18 |
| ATTCTCA | 535 | 0.0 | 10.932579 | 32 |