Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390736.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 773723 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGATAG | 30 | 1.14144736E-4 | 37.48955 | 31 |
| GGCGCCG | 30 | 0.005151618 | 29.993582 | 8 |
| TTACGGC | 30 | 0.005153246 | 29.991642 | 34 |
| CTACGCC | 30 | 0.0051548746 | 29.989706 | 20 |
| GACCGAT | 40 | 6.1743625E-4 | 28.117163 | 29 |
| CGATAGT | 45 | 0.0012281856 | 24.993034 | 32 |
| ACCGCGC | 50 | 0.0022396531 | 22.541805 | 2 |
| CACCGCG | 50 | 0.0022396531 | 22.541805 | 1 |
| ATCTCGT | 70 | 2.7073393E-5 | 22.49373 | 40 |
| ACCGATA | 50 | 0.0022676147 | 22.49373 | 30 |
| TCTCGTA | 65 | 4.2463312E-4 | 20.762102 | 41 |
| CCGCGCC | 55 | 0.0038933016 | 20.492552 | 3 |
| TCGTATG | 55 | 0.003943226 | 20.447525 | 43 |
| GCCGAGG | 135 | 8.604311E-7 | 16.660946 | 44 |
| CGGCTAA | 95 | 2.8238562E-4 | 16.57433 | 17 |
| CGGAAGA | 85 | 0.0025325804 | 15.911864 | 1 |
| ACCATGC | 220 | 2.1645974E-10 | 15.3376255 | 9 |
| CCGAGGT | 90 | 0.003761023 | 14.994852 | 45 |
| TGAGCCG | 155 | 3.62635E-6 | 14.511147 | 45 |
| CGGTTCA | 95 | 0.005381547 | 14.207484 | 9 |