Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378662.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1051563 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 110 | 0.0 | 36.817833 | 44 |
| TCGTATG | 115 | 0.0 | 35.217056 | 43 |
| CTCGTAT | 125 | 0.0 | 32.399693 | 42 |
| CGGTTCA | 125 | 0.0 | 32.39661 | 9 |
| AGACCGG | 135 | 0.0 | 31.66486 | 28 |
| GACCGGC | 130 | 0.0 | 31.152067 | 29 |
| ATCTCGT | 140 | 0.0 | 30.535423 | 40 |
| CGGCTTA | 135 | 0.0 | 29.999716 | 32 |
| CGGAGCG | 30 | 0.0051473016 | 29.999714 | 40 |
| AGCGGTT | 135 | 0.0 | 29.99686 | 7 |
| TCTCGTA | 145 | 0.0 | 29.482477 | 41 |
| GAGCGGT | 155 | 0.0 | 29.04027 | 6 |
| AAGAGCG | 145 | 0.0 | 27.93874 | 4 |
| ACCGGCT | 145 | 0.0 | 27.92944 | 30 |
| TATCTCG | 150 | 0.0 | 26.999743 | 39 |
| GCGGTTC | 150 | 0.0 | 26.997175 | 8 |
| AGAGCGG | 155 | 0.0 | 26.136244 | 5 |
| GAGACCG | 170 | 0.0 | 25.144428 | 27 |
| TGCCGAG | 170 | 0.0 | 25.144428 | 23 |
| ATGCCGA | 170 | 0.0 | 23.821037 | 22 |