Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390760.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 346695 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGTGAG | 55 | 2.746674E-9 | 36.806736 | 31 |
| ATCCGCC | 25 | 0.0021082982 | 35.988808 | 30 |
| CGTATGC | 60 | 6.4246706E-9 | 33.739506 | 44 |
| AGACCGT | 70 | 8.1308826E-10 | 32.132866 | 28 |
| ATCTCGT | 65 | 1.4018951E-8 | 31.144161 | 40 |
| CTCGTAT | 65 | 1.4018951E-8 | 31.144161 | 42 |
| GATCCGC | 30 | 0.0051501836 | 29.990671 | 29 |
| CCGCCCG | 30 | 0.0051501836 | 29.990671 | 32 |
| CATCTCG | 70 | 2.8827344E-8 | 28.919579 | 39 |
| TCTCGTA | 70 | 2.8827344E-8 | 28.919579 | 41 |
| ACCGTGA | 70 | 2.8827344E-8 | 28.919579 | 30 |
| TCGTATG | 75 | 5.6323188E-8 | 26.991604 | 43 |
| GACCGTG | 80 | 1.05252184E-7 | 25.30463 | 29 |
| GAGACCG | 80 | 1.05252184E-7 | 25.30463 | 27 |
| CGTGAGA | 85 | 1.8913852E-7 | 23.816122 | 32 |
| AAGCGCT | 60 | 2.4295719E-4 | 22.545034 | 6 |
| AAAGCGC | 50 | 0.0022353118 | 22.545034 | 5 |
| AGAGCGG | 95 | 5.403763E-7 | 21.358454 | 5 |
| GTATGCC | 110 | 9.966425E-8 | 20.448187 | 45 |
| GAGCGGT | 100 | 8.845982E-7 | 20.290531 | 6 |