Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379253.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 810422 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GGACCGC | 30 | 0.0051471335 | 29.999094 | 13 |
| ATGCCGA | 45 | 3.4903056E-5 | 29.999094 | 22 |
| CCGGGTA | 40 | 6.165649E-4 | 28.124153 | 31 |
| ACCGGGT | 40 | 6.165649E-4 | 28.124153 | 30 |
| TCTCGTA | 40 | 6.165649E-4 | 28.124153 | 41 |
| AGACCGG | 40 | 6.165649E-4 | 28.124153 | 28 |
| CGGAAGA | 45 | 0.0012238136 | 25.008503 | 1 |
| CGTATGC | 45 | 0.0012255762 | 25.00233 | 44 |
| GAGCGGT | 45 | 0.0012260171 | 25.000788 | 6 |
| CGGGTAT | 45 | 0.0012264582 | 24.999245 | 32 |
| GAGACCG | 50 | 0.0022644347 | 22.499323 | 27 |
| AATGCCG | 60 | 2.4671425E-4 | 22.49932 | 21 |
| CGGTTCA | 55 | 0.0039362395 | 20.453928 | 9 |
| GACCGGG | 55 | 0.0039362395 | 20.453928 | 29 |
| TGCCGAG | 55 | 0.0039362395 | 20.453928 | 23 |
| AGAGCGG | 60 | 0.0065053767 | 18.751747 | 5 |
| TCGTATG | 60 | 0.0065100132 | 18.749434 | 43 |
| ACCGTCA | 60 | 0.0065100132 | 18.749434 | 15 |
| ACCACGC | 190 | 4.474714E-10 | 16.578445 | 9 |
| CGTGGCT | 90 | 0.0037534023 | 14.999547 | 42 |