Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390752.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 974757 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGATAC | 40 | 1.5631524E-5 | 33.741074 | 31 |
| TTATACG | 30 | 0.005153539 | 29.992067 | 40 |
| ACCGATA | 50 | 7.170198E-5 | 26.992859 | 30 |
| CGATACT | 50 | 7.170198E-5 | 26.992859 | 32 |
| GACCGAT | 55 | 1.3704525E-4 | 24.538963 | 29 |
| AGATCGG | 65 | 1.5265661E-5 | 24.224361 | 17 |
| GATCGGA | 65 | 1.5265661E-5 | 24.224361 | 18 |
| GAGACCG | 60 | 2.4715558E-4 | 22.494051 | 27 |
| CGTATGC | 65 | 4.245165E-4 | 20.763739 | 44 |
| CTCGTAT | 65 | 4.245165E-4 | 20.763739 | 42 |
| TCTCGTA | 65 | 4.245165E-4 | 20.763739 | 41 |
| GGTCTAC | 60 | 0.0065197493 | 18.745043 | 21 |
| CGTTGGA | 205 | 0.0 | 18.690035 | 5 |
| GTATGCC | 100 | 2.0507772E-5 | 17.99524 | 45 |
| TCGTTGG | 205 | 3.6379788E-12 | 17.588812 | 4 |
| TCGGAAG | 90 | 1.8690858E-4 | 17.495373 | 20 |
| TTCGTTG | 240 | 0.0 | 16.900879 | 3 |
| ATCTCGT | 80 | 0.0017136233 | 16.870537 | 40 |
| CCGAGAC | 95 | 2.824495E-4 | 16.574564 | 45 |
| ATCGGAA | 95 | 2.824495E-4 | 16.574564 | 19 |