Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390662.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 983559 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGAA | 50 | 7.170091E-5 | 26.992954 | 29 |
| GCGATCC | 45 | 0.0012286606 | 24.992205 | 12 |
| AGATCGG | 50 | 0.0022671458 | 22.495272 | 17 |
| GATCGGA | 50 | 0.0022671458 | 22.495272 | 18 |
| ACCGTGC | 65 | 4.236371E-4 | 20.770145 | 9 |
| AGACCGA | 65 | 4.245103E-4 | 20.763811 | 28 |
| CGGCTAA | 110 | 1.0002623E-7 | 20.450247 | 17 |
| CGAACAT | 55 | 0.0039420943 | 20.449207 | 32 |
| ACCGAAC | 55 | 0.0039420943 | 20.449207 | 30 |
| CCGAACA | 60 | 0.00651966 | 18.745108 | 31 |
| CGTTGGA | 190 | 2.3646862E-11 | 17.792894 | 5 |
| ACGGGAT | 130 | 5.7932266E-7 | 17.304056 | 13 |
| CCGGCTA | 135 | 8.598163E-7 | 16.663164 | 16 |
| ACCACGC | 150 | 1.4213947E-7 | 16.500727 | 9 |
| CCCGGCT | 150 | 1.4255238E-7 | 16.496532 | 15 |
| TCGTTGG | 210 | 1.05501385E-10 | 16.094236 | 4 |
| CCTTCGT | 140 | 1.2371347E-6 | 16.092596 | 1 |
| GCTCCGC | 85 | 0.0025684107 | 15.879016 | 36 |
| CTTCGTT | 160 | 2.9177681E-7 | 15.489123 | 2 |
| TTCGTTG | 220 | 2.1282176E-10 | 15.3611145 | 3 |