Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390591.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 317113 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TATCTCG | 40 | 3.4512777E-7 | 39.36976 | 39 |
| CTCGTAT | 45 | 8.682564E-7 | 34.99534 | 42 |
| ACCGTCA | 45 | 8.682564E-7 | 34.99534 | 30 |
| CCGTCAC | 50 | 1.9776944E-6 | 31.495808 | 31 |
| ATCTCGT | 55 | 4.1567528E-6 | 28.632551 | 40 |
| GACCGTC | 55 | 4.1567528E-6 | 28.632551 | 29 |
| CGGTTCA | 55 | 4.1567528E-6 | 28.632551 | 9 |
| TCTCGTA | 55 | 4.1567528E-6 | 28.632551 | 41 |
| AGACCGT | 55 | 4.1567528E-6 | 28.632551 | 28 |
| AAGAGCG | 60 | 8.115683E-6 | 26.271358 | 4 |
| CGTATGC | 60 | 8.175575E-6 | 26.246506 | 44 |
| GAGACCG | 60 | 8.175575E-6 | 26.246506 | 27 |
| CGTCACA | 60 | 8.175575E-6 | 26.246506 | 32 |
| GAGCGGT | 70 | 2.6978016E-5 | 22.497004 | 6 |
| CGGAAGA | 75 | 4.5217595E-5 | 21.040333 | 1 |
| AGAGCGG | 75 | 4.5604604E-5 | 21.017088 | 5 |
| GCGGTTC | 75 | 4.59386E-5 | 20.997204 | 8 |
| CGAAATC | 55 | 0.003933382 | 20.451822 | 9 |
| CCGAGAC | 80 | 7.548692E-5 | 19.68488 | 25 |
| TCGTATG | 80 | 7.548692E-5 | 19.68488 | 43 |