Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379246.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 655648 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 40 | 1.5581918E-5 | 33.754288 | 42 |
| ATCGGAA | 30 | 0.005146303 | 29.999237 | 22 |
| AGACCGA | 50 | 7.155024E-5 | 26.999315 | 28 |
| CGTATGC | 55 | 1.3661473E-4 | 24.548576 | 44 |
| TCTCGTA | 55 | 1.3661473E-4 | 24.548576 | 41 |
| GAGCGGT | 55 | 1.3675628E-4 | 24.544832 | 6 |
| TCGTATG | 60 | 2.463819E-4 | 22.502861 | 43 |
| AGAGCGG | 60 | 2.4650915E-4 | 22.501146 | 5 |
| ACCGAGT | 60 | 2.4663645E-4 | 22.499428 | 30 |
| GAGACCG | 60 | 2.4663645E-4 | 22.499428 | 27 |
| TATCTCG | 60 | 2.4663645E-4 | 22.499428 | 39 |
| AAGAGCG | 65 | 4.2341006E-4 | 20.770288 | 4 |
| ATCTCGT | 65 | 4.236281E-4 | 20.768703 | 40 |
| GACCGAG | 65 | 4.236281E-4 | 20.768703 | 29 |
| AGCGGTT | 65 | 4.236281E-4 | 20.768703 | 7 |
| CCGAGAC | 80 | 7.55815E-5 | 19.687 | 25 |
| GTATGCC | 105 | 1.4418765E-6 | 19.288166 | 45 |
| GCGGTTC | 70 | 6.9802825E-4 | 19.285225 | 8 |
| CGGTTCA | 70 | 6.9802825E-4 | 19.285225 | 9 |
| ATGCCGA | 70 | 6.9802825E-4 | 19.285225 | 22 |