Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378728.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 746277 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGGATA | 25 | 0.0021073595 | 35.997482 | 14 |
| CCGTAGC | 40 | 1.5605836E-5 | 33.74764 | 31 |
| GGTTGCG | 30 | 0.0051478767 | 29.9979 | 31 |
| GTTGCGG | 30 | 0.0051478767 | 29.9979 | 32 |
| CGTATGC | 50 | 7.158499E-5 | 26.998112 | 44 |
| AGCGGTT | 50 | 7.158499E-5 | 26.998112 | 7 |
| CGTAGCA | 50 | 7.158499E-5 | 26.998112 | 32 |
| ACCGTAG | 50 | 7.158499E-5 | 26.998112 | 30 |
| GCGGTTC | 55 | 1.3682246E-4 | 24.543737 | 8 |
| GACCGTA | 55 | 1.3682246E-4 | 24.543737 | 29 |
| ATGCCGA | 55 | 1.3682246E-4 | 24.543737 | 22 |
| AATGCCG | 65 | 1.5236463E-5 | 24.229073 | 21 |
| CTCGTAT | 60 | 2.4675528E-4 | 22.498425 | 42 |
| TCTCGTA | 60 | 2.4675528E-4 | 22.498425 | 41 |
| CCGAGAC | 60 | 2.4675528E-4 | 22.498425 | 25 |
| TCGTATG | 60 | 2.4675528E-4 | 22.498425 | 43 |
| TGCCGAG | 95 | 5.5300916E-7 | 21.314299 | 23 |
| GAGCGGT | 65 | 4.2287385E-4 | 20.774738 | 6 |
| AGACCGT | 65 | 4.238313E-4 | 20.767776 | 28 |
| AGAGCGG | 70 | 6.964742E-4 | 19.29212 | 5 |