Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390617.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 263259 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 30 | 0.005141728 | 29.9981 | 42 |
| GACCGGT | 30 | 0.005141728 | 29.9981 | 29 |
| TCTCGTA | 30 | 0.005141728 | 29.9981 | 41 |
| AACCCCT | 45 | 0.0012244954 | 24.998417 | 10 |
| AGCGGTT | 45 | 0.0012244954 | 24.998417 | 7 |
| CCGTCTC | 65 | 1.50312735E-5 | 24.26149 | 1 |
| ATCTTCG | 50 | 0.0022558535 | 22.507124 | 5 |
| GCGGTTC | 50 | 0.0022608414 | 22.498575 | 8 |
| CGGAAGA | 55 | 0.003899865 | 20.48048 | 1 |
| CAACGAA | 55 | 0.0039300453 | 20.45325 | 7 |
| GAGCGGT | 55 | 0.0039300453 | 20.45325 | 6 |
| GATGATC | 55 | 0.0039300453 | 20.45325 | 36 |
| TCCAACG | 60 | 0.0064856075 | 18.755938 | 5 |
| AGAGCGG | 60 | 0.0064856075 | 18.755938 | 5 |
| CGGTTCA | 60 | 0.0064998544 | 18.748814 | 9 |
| CGTTTCC | 75 | 0.001097756 | 18.022823 | 1 |
| TATCTTC | 275 | 0.0 | 17.18726 | 4 |
| ACTAGAC | 125 | 7.586037E-6 | 16.198977 | 19 |
| GTCTCGA | 85 | 0.002552724 | 15.887383 | 4 |
| ATATCTT | 310 | 0.0 | 15.246762 | 3 |