Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378738.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 367068 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGGATA | 45 | 3.8380676E-10 | 44.998367 | 31 |
| GGATACG | 45 | 3.8380676E-10 | 44.998367 | 33 |
| CGGATAC | 45 | 3.8380676E-10 | 44.998367 | 32 |
| GACCGGA | 50 | 1.0768417E-9 | 40.49853 | 29 |
| TACGATC | 45 | 1.9228537E-8 | 39.998547 | 36 |
| TCTCGTA | 45 | 1.9228537E-8 | 39.998547 | 41 |
| GAGCGGT | 55 | 2.732122E-9 | 36.826878 | 6 |
| GATACGA | 55 | 2.739398E-9 | 36.816845 | 34 |
| CGTATGC | 55 | 2.739398E-9 | 36.816845 | 44 |
| CTCGTAT | 55 | 2.739398E-9 | 36.816845 | 42 |
| GAGACCG | 55 | 2.739398E-9 | 36.816845 | 27 |
| GTATGCC | 55 | 2.739398E-9 | 36.816845 | 45 |
| CCGAGAC | 55 | 2.739398E-9 | 36.816845 | 25 |
| AGAGCGG | 60 | 6.3919288E-9 | 33.75797 | 5 |
| ACCGGAT | 60 | 6.4082997E-9 | 33.74877 | 30 |
| GCGGTTC | 60 | 6.4082997E-9 | 33.74877 | 8 |
| CGGTTCA | 60 | 6.4082997E-9 | 33.74877 | 9 |
| AGCGGTT | 60 | 6.4082997E-9 | 33.74877 | 7 |
| AGACCGG | 60 | 6.4082997E-9 | 33.74877 | 28 |
| TCGTATG | 60 | 6.4082997E-9 | 33.74877 | 43 |