Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378712.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 606792 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TATCTCG | 25 | 0.0021066673 | 35.998814 | 39 |
| AGACCGT | 25 | 0.0021066673 | 35.998814 | 28 |
| GTCGTAT | 25 | 0.0021066673 | 35.998814 | 33 |
| CGTCGTA | 25 | 0.0021066673 | 35.998814 | 32 |
| GACCGTC | 30 | 0.0051461947 | 29.999012 | 29 |
| CCGTCGT | 30 | 0.0051461947 | 29.999012 | 31 |
| ACCGTCG | 30 | 0.0051461947 | 29.999012 | 30 |
| CCGAGAC | 60 | 0.0065082745 | 18.749382 | 25 |
| AACGAAG | 80 | 0.0017099656 | 16.874443 | 25 |
| CGGCTAA | 95 | 0.00537332 | 14.210058 | 17 |
| CCGGCTA | 100 | 0.0075472663 | 13.499555 | 16 |
| CTTTAGT | 135 | 2.6420702E-4 | 13.337291 | 2 |
| GGTGATC | 130 | 0.003019418 | 12.114985 | 24 |
| GCACTCC | 215 | 8.190051E-6 | 11.511249 | 16 |
| ACTAGAC | 320 | 4.7621143E-9 | 11.249629 | 19 |
| CCCGGGA | 150 | 0.008771209 | 10.499654 | 41 |
| CTAGACA | 400 | 1.382432E-9 | 10.124666 | 20 |
| ACCATGC | 185 | 0.003702413 | 9.729408 | 9 |
| TAGACAG | 470 | 2.2555469E-10 | 9.574152 | 21 |
| GGTTGCA | 240 | 3.1404517E-4 | 9.374691 | 37 |