Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379031.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1150989 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTAACGT | 30 | 0.0051484043 | 29.998638 | 31 |
| CTCGTAT | 50 | 0.002265209 | 22.498978 | 42 |
| CACGTAG | 60 | 0.0065122084 | 18.749147 | 16 |
| ACGGGAT | 150 | 1.4234683E-7 | 16.499252 | 13 |
| TCGTTGG | 220 | 2.1645974E-10 | 15.344213 | 4 |
| CGGAAGC | 120 | 9.755946E-5 | 14.999319 | 26 |
| ACTAGAC | 450 | 0.0 | 14.999319 | 19 |
| CCGGGTT | 95 | 0.005377637 | 14.209882 | 8 |
| AATCTCG | 95 | 0.005377637 | 14.209882 | 18 |
| CCTTCGT | 150 | 4.2549254E-5 | 13.505255 | 1 |
| CGGGATT | 200 | 2.4913788E-7 | 13.499387 | 14 |
| CGTTGGA | 240 | 1.2076271E-8 | 13.127827 | 5 |
| AACGGGA | 240 | 1.2119926E-8 | 13.124404 | 12 |
| TCGGCTC | 225 | 7.384551E-8 | 12.99941 | 22 |
| GGAAACG | 225 | 7.384551E-8 | 12.99941 | 9 |
| TTCGTTG | 295 | 1.3242243E-9 | 12.208139 | 3 |
| ACCACGC | 230 | 1.3552635E-6 | 11.738597 | 9 |
| AAACGGG | 275 | 8.078132E-8 | 11.454026 | 11 |
| GAAACGG | 260 | 4.838075E-7 | 11.24949 | 10 |
| TATCTTC | 1020 | 0.0 | 11.031786 | 4 |