Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390641.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1533336 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCGGA | 170 | 0.0 | 31.755405 | 18 |
| AGATCGG | 205 | 0.0 | 26.33547 | 17 |
| TTGGCGC | 45 | 0.0012283705 | 24.99431 | 14 |
| ATCGGAA | 215 | 0.0 | 24.061934 | 19 |
| GCGGTTC | 235 | 0.0 | 22.971996 | 28 |
| ATCCGAG | 50 | 0.0022683793 | 22.494146 | 34 |
| GAGCGGT | 240 | 0.0 | 22.493412 | 26 |
| CGGTTCA | 255 | 0.0 | 22.052366 | 29 |
| CCGAGAC | 245 | 0.0 | 22.032927 | 45 |
| TCGGAAG | 235 | 0.0 | 22.013391 | 20 |
| AGCGGTT | 255 | 0.0 | 21.17027 | 27 |
| TCGCGCC | 75 | 4.536051E-5 | 21.04051 | 6 |
| GATCGCG | 65 | 4.184339E-4 | 20.809296 | 4 |
| CGAGATC | 265 | 0.0 | 20.37272 | 15 |
| TCGCACC | 70 | 6.894915E-4 | 19.322916 | 6 |
| ATCGCGC | 70 | 6.894915E-4 | 19.322916 | 5 |
| AGAGCGG | 280 | 0.0 | 19.280067 | 25 |
| ACCACGC | 215 | 0.0 | 18.830465 | 9 |
| ATTCGCC | 60 | 0.0064394157 | 18.786171 | 6 |
| CCGTAGA | 60 | 0.006524936 | 18.74329 | 31 |