Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379279.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 352317 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GAGCGGT | 20 | 7.0278207E-4 | 44.998436 | 6 |
| GCGGTTC | 25 | 0.0021054887 | 35.99875 | 8 |
| AGAGCGG | 30 | 0.0051433444 | 29.998959 | 5 |
| CCGCTGG | 40 | 6.1588397E-4 | 28.124023 | 31 |
| TCGTATG | 40 | 6.1588397E-4 | 28.124023 | 43 |
| CGAGACC | 50 | 0.0022619737 | 22.499218 | 26 |
| CCTCACT | 60 | 0.0065030493 | 18.74935 | 44 |
| TGGTCAA | 100 | 4.1579193E-4 | 15.749453 | 29 |
| AGGTTGC | 130 | 1.1024129E-5 | 15.576383 | 36 |
| AGTGAGC | 200 | 3.6432612E-6 | 12.37457 | 43 |
| GAGCCAC | 170 | 1.3711856E-4 | 11.913043 | 4 |
| GAGGTTG | 170 | 1.3730014E-4 | 11.911352 | 35 |
| TCACTTG | 190 | 2.9347913E-5 | 11.841695 | 15 |
| TTGCCAT | 185 | 0.0036959273 | 9.729392 | 8 |
| ATCACTT | 255 | 5.374571E-5 | 9.705545 | 14 |
| CAGCTAC | 255 | 5.7432166E-4 | 8.823223 | 29 |
| CAGTGAG | 285 | 1.8071974E-4 | 8.683909 | 42 |
| GTGAGCC | 270 | 0.0010137325 | 8.333044 | 44 |
| TGAGCCA | 270 | 0.009396147 | 7.4997396 | 45 |
| GGCTGAG | 400 | 8.9421985E-4 | 6.7497654 | 42 |