Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378726.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 858381 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGTGAC | 45 | 3.4903802E-5 | 29.9993 | 31 |
| TCTCGTA | 45 | 3.4903802E-5 | 29.9993 | 41 |
| CGTATGC | 50 | 7.15746E-5 | 26.99937 | 44 |
| GAGCGGT | 55 | 1.3664029E-4 | 24.549173 | 6 |
| AGACCGT | 55 | 1.3680248E-4 | 24.544884 | 28 |
| TCGTATG | 55 | 1.3680248E-4 | 24.544884 | 43 |
| CGGAAGA | 65 | 1.5213809E-5 | 24.23444 | 1 |
| ACGCCCG | 50 | 0.0022644533 | 22.499475 | 12 |
| GCGGTTC | 60 | 2.4671914E-4 | 22.499475 | 8 |
| CGTGACA | 60 | 2.4671914E-4 | 22.499475 | 32 |
| AATGCCG | 60 | 2.4671914E-4 | 22.499475 | 21 |
| CTCGTAT | 70 | 6.9825933E-4 | 19.285265 | 42 |
| GACCGTG | 75 | 0.0011100859 | 17.99958 | 29 |
| TGCCGAG | 75 | 0.0011100859 | 17.99958 | 23 |
| TCACCGT | 90 | 1.8628236E-4 | 17.502651 | 6 |
| AGAGCGG | 80 | 0.0017086355 | 16.877558 | 5 |
| ATCTCGT | 80 | 0.0017106349 | 16.874607 | 40 |
| CGGTTCA | 80 | 0.0017106349 | 16.874607 | 9 |
| ACCGTGA | 80 | 0.0017106349 | 16.874607 | 30 |
| CGTTGGA | 135 | 8.5626016E-7 | 16.669193 | 5 |