Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379033.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1271251 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATCTCGT | 170 | 0.0 | 29.116323 | 40 |
| CTCGTAT | 180 | 0.0 | 27.49875 | 42 |
| ACCGAGT | 205 | 0.0 | 27.438856 | 30 |
| GCGGTTC | 200 | 0.0 | 26.999836 | 8 |
| CGGTTCA | 200 | 0.0 | 26.998774 | 9 |
| CATCTCG | 185 | 0.0 | 26.75554 | 39 |
| GACCGAG | 205 | 0.0 | 26.341301 | 29 |
| TCTCGTA | 195 | 0.0 | 25.383461 | 41 |
| GAGCGGT | 215 | 0.0 | 25.11909 | 6 |
| CGTATGC | 200 | 0.0 | 24.748877 | 44 |
| AGACCGA | 220 | 0.0 | 24.545303 | 28 |
| AAGAGCG | 240 | 0.0 | 24.379644 | 4 |
| TCGTATG | 205 | 0.0 | 24.145243 | 43 |
| CGGAAGA | 225 | 0.0 | 24.007408 | 1 |
| AGAGCGG | 225 | 0.0 | 24.004574 | 5 |
| GAGACCG | 225 | 0.0 | 23.999855 | 27 |
| CCGAGAC | 220 | 0.0 | 23.522583 | 25 |
| ATGCCGA | 225 | 0.0 | 22.998955 | 22 |
| AGCGGTT | 235 | 0.0 | 22.978584 | 7 |
| CGAGTTC | 235 | 0.0 | 22.97768 | 32 |