Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378719.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 927210 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ATCGCGC | 35 | 2.8146687E-4 | 32.153145 | 5 |
| TCTCGTA | 45 | 0.0012267875 | 24.998562 | 41 |
| GATCGCG | 55 | 0.003928683 | 20.461092 | 4 |
| GAGCGGT | 55 | 0.003928683 | 20.461092 | 6 |
| CGTATGC | 55 | 0.0039372845 | 20.45337 | 44 |
| CTCGTAT | 55 | 0.0039372845 | 20.45337 | 42 |
| AGACCGT | 55 | 0.0039372845 | 20.45337 | 28 |
| TCGTATG | 55 | 0.0039372845 | 20.45337 | 43 |
| CGTCATG | 55 | 0.0039372845 | 20.45337 | 32 |
| TATCTCG | 75 | 0.0011104315 | 17.998964 | 39 |
| CGCCCAG | 130 | 5.783095E-7 | 17.306698 | 13 |
| CGTTGGA | 135 | 1.5761174E-5 | 15.004801 | 5 |
| ATCTTCG | 95 | 0.0053635775 | 14.215075 | 5 |
| CGGAAGC | 100 | 0.007552442 | 13.499224 | 25 |
| ACGCCCA | 100 | 0.007552442 | 13.499224 | 12 |
| CCCGGGA | 140 | 3.6070347E-4 | 12.856403 | 35 |
| ACCACGC | 165 | 1.0430388E-4 | 12.272022 | 9 |
| TCGTTGG | 150 | 6.4295746E-4 | 12.003841 | 4 |
| CCACGCC | 175 | 1.8047092E-4 | 11.570764 | 10 |
| GAAGCAT | 605 | 0.0 | 11.528263 | 27 |