Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379381.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1721436 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 175 | 0.0 | 29.572365 | 42 |
| CGTATGC | 175 | 0.0 | 29.571505 | 44 |
| GACCGTC | 190 | 0.0 | 28.4203 | 29 |
| ACCGTCG | 195 | 0.0 | 27.691574 | 30 |
| TCTCGTA | 205 | 0.0 | 25.243967 | 41 |
| GAGCGGT | 225 | 0.0 | 25.001516 | 6 |
| TCGTATG | 215 | 0.0 | 24.069828 | 43 |
| CCGTCGA | 225 | 0.0 | 23.999365 | 31 |
| CGTCGAG | 235 | 0.0 | 23.935537 | 32 |
| GTCGAGA | 220 | 0.0 | 23.522104 | 33 |
| ATCTCGT | 225 | 0.0 | 23.00006 | 40 |
| AGACCGT | 225 | 0.0 | 22.999392 | 28 |
| GCGGTTC | 265 | 0.0 | 22.074888 | 8 |
| CGAGAAT | 250 | 0.0 | 20.699453 | 35 |
| TCGAGAA | 255 | 0.0 | 20.293583 | 34 |
| CGGTTCA | 280 | 0.0 | 20.088755 | 9 |
| AGCGGTT | 295 | 0.0 | 19.829985 | 7 |
| CGGAAGA | 285 | 0.0 | 19.740908 | 1 |
| CCGAGAC | 295 | 0.0 | 18.3046 | 25 |
| ATGCCGA | 310 | 0.0 | 18.144682 | 22 |