Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379390.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1235494 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 170 | 0.0 | 37.05799 | 44 |
| ACGGTAC | 25 | 0.0021074025 | 35.999187 | 12 |
| CTCGTAT | 185 | 0.0 | 35.269474 | 42 |
| TCTCGTA | 180 | 0.0 | 34.999214 | 41 |
| GCGGTTC | 185 | 0.0 | 34.053288 | 8 |
| ACCGGCA | 190 | 0.0 | 33.157146 | 30 |
| GACCGGC | 195 | 0.0 | 32.306965 | 29 |
| TCGTATG | 195 | 0.0 | 32.306965 | 43 |
| CGGCAGT | 200 | 0.0 | 31.49929 | 32 |
| AGCGGTT | 205 | 0.0 | 30.731016 | 7 |
| AGACCGG | 205 | 0.0 | 30.731016 | 28 |
| GAGCGGT | 210 | 0.0 | 30.004183 | 6 |
| GAGACCG | 210 | 0.0 | 29.999325 | 27 |
| CCGGCAG | 215 | 0.0 | 29.301666 | 31 |
| AATCTCG | 220 | 0.0 | 28.63572 | 39 |
| AGAGCGG | 225 | 0.0 | 28.003904 | 5 |
| ATCTCGT | 225 | 0.0 | 27.999369 | 40 |
| ATGCCGA | 225 | 0.0 | 27.999369 | 22 |
| TGCCGAG | 235 | 0.0 | 27.765333 | 23 |
| CGGTTCA | 235 | 0.0 | 26.807907 | 9 |