Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390690.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 894813 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GTACCGA | 30 | 0.005104748 | 30.050203 | 1 |
| AGATCGG | 70 | 2.7069289E-5 | 22.49483 | 17 |
| GATCGGA | 75 | 4.609322E-5 | 20.995174 | 18 |
| ATCGGAA | 80 | 7.5739685E-5 | 19.682978 | 19 |
| GCGGTTC | 95 | 1.317908E-5 | 18.943014 | 28 |
| CCGAGAC | 85 | 1.2067018E-4 | 18.52412 | 45 |
| ACGCCCG | 75 | 0.0011120915 | 17.99486 | 12 |
| CCTTCGT | 130 | 5.678703E-7 | 17.336655 | 1 |
| TCGGAAG | 95 | 2.8246272E-4 | 16.574211 | 20 |
| AGCGGTT | 100 | 4.173042E-4 | 15.746382 | 27 |
| CGGCTAA | 130 | 1.10825495E-5 | 15.573344 | 17 |
| GAGCGGT | 105 | 6.048102E-4 | 14.995715 | 26 |
| GCCCGGC | 200 | 1.5763362E-8 | 14.62164 | 14 |
| CGCCCGG | 110 | 8.600667E-4 | 14.314892 | 13 |
| CGGTTCA | 115 | 0.0012034989 | 13.692506 | 29 |
| AGAGCGG | 120 | 0.0016594734 | 13.121251 | 25 |
| CCGGCTA | 155 | 5.819516E-5 | 13.061515 | 16 |
| ACGGGAT | 125 | 0.002254731 | 12.597104 | 13 |
| CTTCGTT | 145 | 4.77886E-4 | 12.4345665 | 2 |
| CCCGGCT | 165 | 1.04463856E-4 | 12.269908 | 15 |