Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379260.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 707115 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 40 | 1.5577085E-5 | 33.756367 | 44 |
| AGACCGC | 40 | 1.5599726E-5 | 33.749203 | 28 |
| CTCGTAT | 55 | 1.3657258E-4 | 24.550085 | 42 |
| TCTCGTA | 55 | 1.3657258E-4 | 24.550085 | 41 |
| TCGTATG | 55 | 1.3657258E-4 | 24.550085 | 43 |
| ATCTCGT | 55 | 1.367694E-4 | 24.544876 | 40 |
| GCGGTTC | 55 | 1.367694E-4 | 24.544876 | 8 |
| GACCGCA | 55 | 1.367694E-4 | 24.544876 | 29 |
| GAGCGGT | 55 | 1.367694E-4 | 24.544876 | 6 |
| ATGCCGA | 55 | 1.367694E-4 | 24.544876 | 22 |
| ACCGCAG | 65 | 1.5229514E-5 | 24.230198 | 30 |
| AGCGGTT | 60 | 2.4666003E-4 | 22.499468 | 7 |
| AATGCCG | 60 | 2.4666003E-4 | 22.499468 | 21 |
| CCGAGAC | 65 | 4.2366819E-4 | 20.768742 | 25 |
| CGCAGGT | 65 | 4.2366819E-4 | 20.768742 | 32 |
| CGGAAGA | 90 | 8.245557E-6 | 19.999529 | 1 |
| TGCCGAG | 80 | 7.559113E-5 | 19.687037 | 23 |
| GAGACCG | 70 | 6.98094E-4 | 19.28526 | 27 |
| CGCCACC | 110 | 2.2539916E-6 | 18.408657 | 5 |
| TCGTTGG | 135 | 4.2664396E-8 | 18.332901 | 4 |