Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379342.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 2120769 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGGTTC | 205 | 0.0 | 29.63289 | 8 |
| TATCTCG | 195 | 0.0 | 28.847649 | 39 |
| CGTATGC | 200 | 0.0 | 28.125134 | 44 |
| AGACCGC | 205 | 0.0 | 27.43786 | 28 |
| TCTCGTA | 215 | 0.0 | 26.164148 | 41 |
| TCGTATG | 215 | 0.0 | 26.162914 | 43 |
| CTCGTAT | 220 | 0.0 | 25.570715 | 42 |
| GACCGCA | 220 | 0.0 | 25.567097 | 29 |
| GAGACCG | 235 | 0.0 | 24.892561 | 27 |
| GAGCGGT | 245 | 0.0 | 24.797789 | 6 |
| AGCGGTT | 265 | 0.0 | 23.772577 | 7 |
| ATCTCGT | 250 | 0.0 | 23.401215 | 40 |
| CGGTTCA | 265 | 0.0 | 22.923557 | 9 |
| AAGAGCG | 270 | 0.0 | 22.501698 | 4 |
| AGAGCGG | 270 | 0.0 | 22.501698 | 5 |
| CGCATCA | 265 | 0.0 | 22.074535 | 32 |
| CCGCATC | 255 | 0.0 | 22.057886 | 31 |
| CGGAAGA | 295 | 0.0 | 21.359558 | 1 |
| ACCGCAT | 285 | 0.0 | 20.525444 | 30 |
| ATGCCGA | 290 | 0.0 | 20.172033 | 22 |