Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390732.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1166941 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGATAGA | 40 | 6.175686E-4 | 28.117609 | 32 |
| CGTATGC | 40 | 6.1772345E-4 | 28.116404 | 44 |
| CCGATAG | 50 | 0.0022680913 | 22.494087 | 31 |
| GACCGAT | 50 | 0.0022680913 | 22.494087 | 29 |
| TATCTCG | 75 | 4.6120418E-5 | 20.99448 | 39 |
| TCTCGTA | 55 | 0.00394257 | 20.449171 | 41 |
| CTCGTAT | 60 | 0.0065204417 | 18.745071 | 42 |
| ACCGATA | 60 | 0.0065204417 | 18.745071 | 30 |
| TTCACGC | 85 | 0.0025696976 | 15.8781805 | 15 |
| ATGCCCG | 85 | 0.0025704324 | 15.877499 | 12 |
| GTATAGG | 90 | 0.003760537 | 14.9960575 | 31 |
| GTATGCC | 90 | 0.003761609 | 14.995415 | 45 |
| CACTCGT | 100 | 0.0074788933 | 13.519625 | 1 |
| ACGGAAG | 125 | 0.002256002 | 12.596688 | 24 |
| GAGCCGA | 215 | 6.013979E-7 | 12.554838 | 40 |
| CGTGAGC | 180 | 1.6682228E-5 | 12.518171 | 1 |
| CGGCTAA | 130 | 0.0030275006 | 12.112201 | 17 |
| GCCCGGC | 205 | 4.840156E-6 | 12.069997 | 14 |
| CACGCCC | 175 | 1.805324E-4 | 11.570867 | 11 |
| CCGGCTA | 165 | 0.0014358566 | 10.906224 | 16 |