Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379053.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 778993 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGACCGC | 50 | 4.8772563E-8 | 35.99856 | 28 |
| CGTATGC | 60 | 2.418128E-7 | 29.998802 | 44 |
| GCGGTTC | 70 | 9.304331E-7 | 25.713257 | 8 |
| TCTCGTA | 70 | 9.304331E-7 | 25.713257 | 41 |
| ATCTCGT | 75 | 1.6970644E-6 | 23.999043 | 40 |
| CTCGTAT | 80 | 2.973742E-6 | 22.499102 | 42 |
| CGGTTCA | 80 | 2.973742E-6 | 22.499102 | 9 |
| GACCGCT | 80 | 2.973742E-6 | 22.499102 | 29 |
| TCGTATG | 80 | 2.973742E-6 | 22.499102 | 43 |
| AGAGCGG | 85 | 5.019332E-6 | 21.181063 | 5 |
| CATGCGC | 55 | 0.003927554 | 20.461609 | 1 |
| ACCGCTG | 90 | 8.248491E-6 | 19.9992 | 30 |
| AGCGGTT | 90 | 8.248491E-6 | 19.9992 | 7 |
| ATGCCGA | 90 | 8.248491E-6 | 19.9992 | 22 |
| GAGCGGT | 95 | 1.3124856E-5 | 18.951477 | 6 |
| CCGAGAC | 95 | 1.3153955E-5 | 18.946611 | 25 |
| TGCCGAG | 95 | 1.3153955E-5 | 18.946611 | 23 |
| GTATGCC | 110 | 2.254943E-6 | 18.408354 | 45 |
| GAGACCG | 100 | 2.0459624E-5 | 17.99928 | 27 |
| CGGCTAA | 125 | 3.8309008E-7 | 17.99928 | 17 |