Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390777.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 913882 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGCGTA | 45 | 3.8562575E-10 | 44.98364 | 31 |
| CGCGTAG | 45 | 3.8562575E-10 | 44.98364 | 32 |
| TCTCGTA | 60 | 6.4555934E-9 | 33.735886 | 41 |
| GACCGCG | 65 | 1.4078978E-8 | 31.14252 | 29 |
| GCGTAGA | 65 | 1.4078978E-8 | 31.14252 | 33 |
| ATCTCGT | 65 | 1.4086254E-8 | 31.140818 | 40 |
| TGCTCGA | 30 | 0.005087262 | 30.071363 | 4 |
| AGACCGC | 70 | 2.8934664E-8 | 28.919636 | 28 |
| ACCGCGT | 70 | 2.8951035E-8 | 28.918053 | 30 |
| CTCGTAT | 70 | 9.338055E-7 | 25.70353 | 42 |
| ACCGCGC | 60 | 2.4712193E-4 | 22.494282 | 9 |
| CGTAGAA | 90 | 3.2986827E-7 | 22.49059 | 34 |
| CCGAGAC | 100 | 9.082396E-7 | 20.24264 | 25 |
| CGTATGC | 90 | 8.278086E-6 | 19.991634 | 44 |
| TCGTATG | 90 | 8.278086E-6 | 19.991634 | 43 |
| GAGCGGT | 105 | 1.4109028E-6 | 19.333714 | 6 |
| CACCGCG | 60 | 0.0065190564 | 18.745235 | 8 |
| GCGGTTC | 110 | 2.2604363E-6 | 18.404411 | 8 |
| AATCTCG | 110 | 2.2639852E-6 | 18.401392 | 39 |
| GAGACCG | 115 | 3.4572695E-6 | 17.603256 | 27 |