Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378749.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 745206 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGCGTA | 45 | 3.8380676E-10 | 44.998993 | 31 |
| CGCGTAG | 50 | 1.0804797E-9 | 40.499096 | 32 |
| GACCGCG | 55 | 2.746674E-9 | 36.81736 | 29 |
| ACCGCGT | 60 | 6.4264896E-9 | 33.749245 | 30 |
| AGACCGC | 60 | 6.4264896E-9 | 33.749245 | 28 |
| GCGTAGA | 60 | 6.4264896E-9 | 33.749245 | 33 |
| GCGGTTC | 65 | 1.4024408E-8 | 31.15315 | 8 |
| CGTATGC | 70 | 2.8840077E-8 | 28.927921 | 44 |
| AGCGGTT | 70 | 2.8840077E-8 | 28.927921 | 7 |
| CGTAGAA | 70 | 2.8840077E-8 | 28.927921 | 34 |
| TCGTATG | 70 | 2.8840077E-8 | 28.927921 | 43 |
| CGGAAGA | 75 | 5.6237695E-8 | 27.004833 | 1 |
| CGGTTCA | 75 | 5.6348654E-8 | 26.999395 | 9 |
| GAGCGGT | 80 | 1.05161234E-7 | 25.315332 | 6 |
| AGAGCGG | 85 | 1.8897481E-7 | 23.826195 | 5 |
| CTCGTAT | 85 | 1.8922037E-7 | 23.822998 | 42 |
| TCTCGTA | 85 | 1.8922037E-7 | 23.822998 | 41 |
| GATTTCG | 50 | 0.0022641623 | 22.499498 | 7 |
| CGCCCGG | 60 | 2.4667536E-4 | 22.499496 | 13 |
| ATCTCGT | 95 | 5.527527E-7 | 21.315311 | 40 |