Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390707.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 699026 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGATCGG | 50 | 0.002266994 | 22.49442 | 17 |
| CGGAAGC | 65 | 4.2450876E-4 | 20.762594 | 25 |
| GATCGGA | 55 | 0.0039406754 | 20.449472 | 18 |
| ATGCCCG | 55 | 0.0039423085 | 20.44801 | 12 |
| ATCGGAA | 60 | 0.006517329 | 18.74535 | 19 |
| TGCCCGG | 80 | 0.001712779 | 16.870815 | 13 |
| ACGGAAG | 80 | 0.0017135991 | 16.86961 | 24 |
| CGGCTAA | 95 | 2.8227066E-4 | 16.574837 | 17 |
| CCGGCTA | 100 | 4.1719928E-4 | 15.746093 | 16 |
| ACGGGAT | 90 | 0.0037581557 | 14.996281 | 13 |
| AACGGAA | 95 | 0.0053846263 | 14.205986 | 23 |
| CGCCACC | 115 | 0.0011838429 | 13.721703 | 5 |
| CGAGTAG | 100 | 0.0074528405 | 13.525679 | 5 |
| CCGAGTA | 100 | 0.007466991 | 13.521802 | 4 |
| CGGGATT | 100 | 0.0075595197 | 13.496652 | 14 |
| TCCCGAG | 120 | 0.0016335181 | 13.148081 | 2 |
| CCCGAGT | 120 | 0.0016352826 | 13.146195 | 3 |
| GGGTGAC | 125 | 0.0022553974 | 12.595974 | 28 |
| GCCCGGC | 145 | 4.8544476E-4 | 12.410714 | 14 |
| GAGACGG | 205 | 4.8354013E-6 | 12.069313 | 27 |