Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390623.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1212698 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCCAACG | 30 | 0.005154477 | 29.991535 | 38 |
| CTCGTAT | 70 | 9.3345443E-7 | 25.705969 | 42 |
| GATCGGA | 105 | 2.3737812E-9 | 23.565748 | 18 |
| ATCGGAA | 115 | 2.6557245E-10 | 23.471636 | 19 |
| AGATCGG | 110 | 4.0636223E-9 | 22.494577 | 17 |
| TATGCCG | 50 | 0.0022689418 | 22.492722 | 43 |
| TCGGAAG | 120 | 1.1094016E-8 | 20.61833 | 20 |
| GGTACCG | 55 | 0.0039421595 | 20.449615 | 14 |
| ACGCCCG | 100 | 9.0803223E-7 | 20.244286 | 12 |
| TCTCGTA | 70 | 6.9989933E-4 | 19.279476 | 41 |
| CGCCCGG | 125 | 7.644332E-6 | 16.196096 | 13 |
| CCTTCGT | 170 | 3.3287506E-8 | 15.911988 | 1 |
| CCGAGAC | 145 | 1.8150295E-6 | 15.512222 | 45 |
| CGGCTAA | 175 | 4.8781658E-8 | 15.424853 | 17 |
| ACCACGC | 220 | 2.1827873E-10 | 15.335948 | 9 |
| GCGGTTC | 180 | 6.892515E-8 | 14.996386 | 28 |
| CGTTGGA | 245 | 6.730261E-11 | 14.721295 | 5 |
| GCCCGGC | 215 | 2.590241E-9 | 14.647633 | 14 |
| CACGCCC | 200 | 1.5801561E-8 | 14.62027 | 11 |
| ACGCCCA | 95 | 0.005386314 | 14.206516 | 12 |