Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379080.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 723191 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGCGGTT | 80 | 1.0004442E-10 | 30.935505 | 7 |
| ACCGGAT | 75 | 1.7025741E-9 | 29.998062 | 30 |
| CGGATAT | 75 | 1.7025741E-9 | 29.998062 | 32 |
| CCGGATA | 85 | 2.0372681E-10 | 29.115768 | 31 |
| GACCGGA | 80 | 3.3924152E-9 | 28.123186 | 29 |
| CGTATGC | 85 | 6.4774213E-9 | 26.46888 | 44 |
| GCGGTTC | 95 | 7.421477E-10 | 26.050951 | 8 |
| ATCTCGT | 90 | 1.1903467E-8 | 24.998386 | 40 |
| AGACGCC | 45 | 0.0012265759 | 24.998386 | 16 |
| TCGTATG | 90 | 1.1903467E-8 | 24.998386 | 43 |
| CGGTTCA | 100 | 1.3442332E-9 | 24.748402 | 9 |
| AGATCGC | 55 | 1.3629874E-4 | 24.557455 | 3 |
| CTCGTAT | 95 | 2.1142114E-8 | 23.682682 | 42 |
| GAGCGGT | 115 | 2.6375346E-10 | 23.48649 | 6 |
| CGGAAGA | 120 | 4.474714E-10 | 22.511 | 1 |
| AGACCGG | 100 | 3.6421625E-8 | 22.498547 | 28 |
| ATCGAGA | 50 | 0.0022646533 | 22.498547 | 44 |
| AGAGCGG | 125 | 7.4760464E-10 | 21.60757 | 5 |
| TCTCGTA | 105 | 6.1041646E-8 | 21.427187 | 41 |
| GAGACCG | 110 | 9.9780664E-8 | 20.453226 | 27 |