Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390646.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1648829 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGCCGAC | 30 | 0.005154724 | 29.991873 | 36 |
| ACCGCGC | 95 | 2.3646862E-11 | 28.41249 | 9 |
| CGCGCCC | 85 | 6.504706E-9 | 26.463417 | 11 |
| CACCGCG | 105 | 8.54925E-11 | 25.706541 | 8 |
| GTACGAA | 55 | 1.3710737E-4 | 24.538805 | 34 |
| CGCCCGG | 160 | 0.0 | 23.901222 | 13 |
| AATCCGT | 50 | 0.0022685928 | 22.493904 | 35 |
| CGTATGC | 70 | 2.7102133E-5 | 22.493223 | 44 |
| ACGCCCG | 135 | 8.367351E-11 | 21.660797 | 12 |
| CCGCGCC | 135 | 8.367351E-11 | 21.66014 | 10 |
| GACCGTA | 75 | 4.6138128E-5 | 20.994312 | 29 |
| TAGTACG | 65 | 4.2479348E-4 | 20.762976 | 32 |
| AGTACGA | 70 | 6.997978E-4 | 19.28049 | 33 |
| ACCGTAG | 95 | 1.3194769E-5 | 18.942236 | 30 |
| CCGGCTA | 250 | 0.0 | 18.896025 | 16 |
| CGGCTAA | 250 | 0.0 | 18.896025 | 17 |
| CCGAACT | 60 | 0.006521861 | 18.74492 | 33 |
| CTGGCGA | 60 | 0.006521861 | 18.74492 | 38 |
| GGTTTCG | 120 | 5.0926574E-6 | 16.90375 | 4 |
| GCGCCCG | 80 | 0.0017143758 | 16.870428 | 12 |