Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390698.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 886818 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGAGAC | 130 | 0.0 | 27.683878 | 45 |
| GATCGGA | 115 | 0.0 | 27.382965 | 18 |
| ATCGGAA | 130 | 0.0 | 25.953636 | 19 |
| AGATCGG | 125 | 1.8189894E-12 | 25.192327 | 17 |
| AGACCGT | 45 | 0.0012285127 | 24.992388 | 43 |
| GCGGTTC | 135 | 3.6379788E-12 | 23.327543 | 28 |
| CGGTTCA | 145 | 9.094947E-12 | 21.71875 | 29 |
| GAGCGGT | 145 | 9.094947E-12 | 21.717525 | 26 |
| TCGGAAG | 165 | 3.6379788E-12 | 20.448317 | 20 |
| AGCGGTT | 155 | 2.3646862E-11 | 20.31754 | 27 |
| AGAGCGG | 165 | 6.002665E-11 | 19.085096 | 25 |
| GACCGTG | 60 | 0.0065208026 | 18.744291 | 44 |
| GAGACCG | 60 | 0.0065208026 | 18.744291 | 42 |
| CGGAAGA | 190 | 2.3646862E-11 | 17.75775 | 21 |
| CCTTCGT | 105 | 3.06831E-5 | 17.170553 | 1 |
| CGTGTTA | 80 | 0.0017139171 | 16.869862 | 12 |
| CGTTGGA | 135 | 8.418465E-7 | 16.696424 | 5 |
| ACCTCCG | 125 | 7.640208E-6 | 16.19598 | 35 |
| ATCGTGC | 85 | 0.0025341993 | 15.91071 | 5 |
| AAGAGCG | 200 | 9.313226E-10 | 15.745204 | 24 |