Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379025.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1214733 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGAACCC | 40 | 1.560845E-5 | 33.74935 | 32 |
| GACCGAA | 45 | 3.491463E-5 | 29.999426 | 29 |
| TCGTATG | 55 | 4.165817E-6 | 28.635815 | 43 |
| ACCGAAC | 40 | 6.1670406E-4 | 28.12446 | 30 |
| CTCGTAT | 60 | 8.19327E-6 | 26.249496 | 42 |
| CCGAACC | 45 | 0.0012267322 | 24.999521 | 31 |
| CATCTCG | 95 | 2.819934E-4 | 16.578629 | 39 |
| CCGAGAC | 90 | 0.0037545639 | 14.999713 | 25 |
| ATCGTGC | 95 | 0.005373996 | 14.211423 | 5 |
| GCGTGAT | 100 | 0.007552303 | 13.49974 | 14 |
| AAGAGCG | 120 | 0.0016557148 | 13.125828 | 4 |
| CCTTCGT | 195 | 2.752986E-6 | 12.694677 | 1 |
| AATCGCT | 160 | 7.8241945E-5 | 12.656007 | 7 |
| CGAGATC | 190 | 2.9420138E-5 | 11.844316 | 1 |
| CGTTGGA | 275 | 8.067582E-8 | 11.455269 | 5 |
| ACCGTGT | 140 | 0.005257193 | 11.249784 | 10 |
| CGGGATT | 235 | 2.1996955E-5 | 10.531712 | 14 |
| CGCTCCA | 150 | 0.008778813 | 10.499798 | 25 |
| TCGTTGG | 305 | 3.3672404E-7 | 10.328521 | 4 |
| CGAGTAG | 180 | 0.0029525207 | 10.000631 | 5 |