Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390629.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1083353 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGGGTCG | 25 | 0.0021091565 | 35.99269 | 38 |
| TCTCGTA | 85 | 5.456968E-12 | 31.756788 | 41 |
| TATCTCG | 110 | 5.456968E-12 | 26.585508 | 39 |
| TCTGGCG | 50 | 0.0022672005 | 22.49543 | 35 |
| AGACCGT | 120 | 4.5292836E-10 | 22.494392 | 28 |
| ATCTCGT | 135 | 8.367351E-11 | 21.661266 | 40 |
| CTCGTAT | 125 | 7.548806E-10 | 21.594618 | 42 |
| GAGACCG | 125 | 7.548806E-10 | 21.594618 | 27 |
| ACGCCCG | 65 | 4.2438268E-4 | 20.765013 | 12 |
| CGTGGAG | 130 | 1.2314558E-9 | 20.764055 | 32 |
| CGTATGC | 130 | 1.2314558E-9 | 20.764055 | 44 |
| TCGTATG | 130 | 1.2314558E-9 | 20.764055 | 43 |
| ACTTCGT | 55 | 0.003942081 | 20.449448 | 23 |
| CCGAGAC | 145 | 2.2009772E-10 | 20.167387 | 25 |
| ACCGTGG | 150 | 3.45608E-10 | 19.49514 | 30 |
| TTACACG | 60 | 0.0064538964 | 18.778261 | 5 |
| CTGTGCG | 60 | 0.0064556194 | 18.777393 | 4 |
| GACCGTG | 145 | 4.785761E-9 | 18.616049 | 29 |
| CCGTGGA | 145 | 4.785761E-9 | 18.616049 | 31 |
| CGCCCGG | 85 | 1.2066634E-4 | 18.524794 | 13 |