Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379401.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1673081 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGAACTA | 195 | 0.0 | 40.383327 | 32 |
| ACCGAAC | 215 | 0.0 | 37.673218 | 30 |
| GCGGTTC | 220 | 0.0 | 36.81701 | 8 |
| GACCGAA | 215 | 0.0 | 36.62674 | 29 |
| CGTATGC | 220 | 0.0 | 35.79431 | 44 |
| CTCGTAT | 230 | 0.0 | 34.238037 | 42 |
| TCTCGTA | 230 | 0.0 | 34.238037 | 41 |
| TCGTATG | 235 | 0.0 | 33.50957 | 43 |
| GAGCGGT | 245 | 0.0 | 33.065113 | 6 |
| CGGTTCA | 255 | 0.0 | 32.646015 | 9 |
| AGACCGA | 250 | 0.0 | 31.498995 | 28 |
| AGCGGTT | 260 | 0.0 | 31.152855 | 7 |
| GAGACCG | 260 | 0.0 | 31.152855 | 27 |
| CCGAGAC | 255 | 0.0 | 30.881365 | 25 |
| ATCTCGT | 280 | 0.0 | 29.731194 | 40 |
| CCGAACT | 265 | 0.0 | 29.716034 | 31 |
| ATGCCGA | 265 | 0.0 | 29.716034 | 22 |
| TGCCGAG | 275 | 0.0 | 29.453606 | 23 |
| AAGAGCG | 285 | 0.0 | 28.426945 | 4 |
| AATGCCG | 285 | 0.0 | 28.420147 | 21 |