Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390628.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 2252013 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGACGC | 25 | 0.0021101162 | 35.991028 | 27 |
| GTACGCG | 30 | 0.005156812 | 29.98986 | 43 |
| GTCGATC | 115 | 9.094947E-12 | 25.427315 | 36 |
| TCGTATG | 135 | 0.0 | 24.99155 | 43 |
| CGAAGTC | 125 | 2.910383E-11 | 23.392092 | 32 |
| GACCGAA | 140 | 5.456968E-12 | 22.493895 | 29 |
| TCTCGTA | 150 | 0.0 | 22.492395 | 41 |
| CCGAAGT | 145 | 9.094947E-12 | 21.716795 | 31 |
| AGTCGAT | 140 | 1.382432E-10 | 20.886724 | 35 |
| CGTATGC | 140 | 1.382432E-10 | 20.885796 | 44 |
| CGCCCGG | 210 | 0.0 | 20.351168 | 13 |
| CCGGCTA | 255 | 0.0 | 19.406065 | 16 |
| ACGCCCG | 140 | 3.101377E-9 | 19.280481 | 12 |
| ACCGAAG | 175 | 7.2759576E-12 | 19.280054 | 30 |
| GAAGTCG | 155 | 5.366019E-10 | 18.865429 | 33 |
| AGATCGG | 275 | 0.0 | 18.812656 | 17 |
| GATCGGA | 270 | 0.0 | 18.327545 | 18 |
| AGACCGA | 185 | 1.6370905E-11 | 18.238697 | 28 |
| ATCTCGT | 185 | 1.6370905E-11 | 18.237078 | 40 |
| CTCGTAT | 180 | 2.0918378E-10 | 17.494085 | 42 |