Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379295.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 436014 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AACGTAT | 30 | 1.1389305E-4 | 37.499046 | 35 |
| CGGAACG | 30 | 1.1389305E-4 | 37.499046 | 32 |
| CTCGTAT | 30 | 1.1389305E-4 | 37.499046 | 42 |
| CGTATCT | 35 | 2.817947E-4 | 32.142036 | 37 |
| GACCGGA | 35 | 2.817947E-4 | 32.142036 | 29 |
| AATGCCG | 35 | 2.817947E-4 | 32.142036 | 21 |
| TCTCGTA | 35 | 2.817947E-4 | 32.142036 | 41 |
| TCGTATG | 35 | 2.817947E-4 | 32.142036 | 43 |
| AGCGGTT | 30 | 0.0051444354 | 29.999237 | 7 |
| ACCGGAA | 40 | 6.1608746E-4 | 28.124283 | 30 |
| CGTATGC | 40 | 6.1608746E-4 | 28.124283 | 44 |
| GAACGTA | 40 | 6.1608746E-4 | 28.124283 | 34 |
| TATCTCG | 50 | 7.1496244E-5 | 26.999311 | 39 |
| AGAGCGG | 45 | 0.0012246966 | 25.00223 | 5 |
| GGAACGT | 45 | 0.001225516 | 24.999363 | 33 |
| ACGTATC | 45 | 0.001225516 | 24.999363 | 36 |
| CGGAAGA | 50 | 0.0022581874 | 22.50717 | 1 |
| GAGCGGT | 50 | 0.0022612005 | 22.502007 | 6 |
| CCGGAAC | 50 | 0.002262708 | 22.499426 | 31 |
| ATGCCGA | 50 | 0.002262708 | 22.499426 | 22 |