Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390615.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 199578 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AACCCCG | 30 | 1.1372525E-4 | 37.496033 | 31 |
| AGATCGA | 25 | 0.0020859807 | 36.059437 | 1 |
| ATCTTCG | 45 | 8.60844E-7 | 35.02262 | 5 |
| TTCGTAT | 40 | 1.555263E-5 | 33.74643 | 8 |
| TCGTATA | 35 | 2.813832E-4 | 32.139458 | 9 |
| TCGAGAC | 60 | 2.3884786E-7 | 30.01939 | 4 |
| CTTCGTA | 55 | 4.1457206E-6 | 28.633335 | 7 |
| GTTCGAG | 40 | 6.12495E-4 | 28.143179 | 2 |
| ACTAGAC | 75 | 5.595939E-8 | 26.997145 | 19 |
| TCTTCGT | 60 | 8.153995E-6 | 26.247223 | 6 |
| AGTTCGA | 45 | 0.001211292 | 25.041277 | 1 |
| TTCGAGA | 45 | 0.0012184032 | 25.01616 | 3 |
| CGAGACC | 65 | 1.5079946E-5 | 24.246433 | 5 |
| TCTCGAA | 50 | 0.0022594952 | 22.497622 | 10 |
| ACCCCGT | 50 | 0.0022594952 | 22.497622 | 32 |
| ACCATCC | 60 | 2.459371E-4 | 22.49762 | 9 |
| CCCCGTC | 55 | 0.003927728 | 20.452383 | 33 |
| CGGCTCA | 55 | 0.003927728 | 20.452383 | 23 |
| GTGAAAC | 95 | 1.3081464E-5 | 18.945364 | 27 |
| GAGACTA | 60 | 0.0064960616 | 18.748016 | 13 |