Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390670.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 829550 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGCTTA | 45 | 8.7151057E-7 | 34.9902 | 31 |
| AGATCGG | 75 | 1.7062121E-9 | 29.993408 | 17 |
| CGTATGC | 45 | 3.496361E-5 | 29.9916 | 44 |
| ACCGCTT | 45 | 3.496361E-5 | 29.9916 | 30 |
| GACCGCT | 55 | 4.1721814E-6 | 28.628347 | 29 |
| CGTGCCC | 40 | 6.172613E-4 | 28.11882 | 11 |
| CGCTTAA | 50 | 7.1696864E-5 | 26.992443 | 32 |
| GATCGGA | 85 | 6.491973E-9 | 26.464773 | 18 |
| TGTTACG | 45 | 0.0012278387 | 24.994509 | 18 |
| ATCTCGT | 55 | 1.3703556E-4 | 24.538584 | 40 |
| ATCGGAA | 95 | 2.118577E-8 | 23.679007 | 19 |
| TCTCGTA | 60 | 2.4713852E-4 | 22.493702 | 41 |
| TCGTATG | 60 | 2.4713852E-4 | 22.493702 | 43 |
| TCCCCCG | 50 | 0.0022677684 | 22.493702 | 43 |
| TCGGAAG | 105 | 6.1207174E-8 | 21.422573 | 20 |
| CATCTCG | 75 | 4.6105866E-5 | 20.99412 | 39 |
| CTCGTAT | 65 | 4.244875E-4 | 20.763416 | 42 |
| AGACCGC | 65 | 4.244875E-4 | 20.763416 | 28 |
| CGTTGGA | 150 | 7.1031536E-9 | 18.030825 | 5 |
| GAGCGAG | 90 | 1.8688846E-4 | 17.4951 | 36 |