Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390774.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 810565 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GATCGGA | 120 | 0.0 | 33.74283 | 18 |
| AGATCGG | 135 | 0.0 | 29.993626 | 17 |
| TACACGT | 30 | 0.0051517235 | 29.993626 | 15 |
| ATCGGAA | 140 | 0.0 | 28.922424 | 19 |
| TCGGAAG | 155 | 0.0 | 26.120258 | 20 |
| GCGGTTC | 165 | 0.0 | 24.53721 | 28 |
| CGGTTCA | 180 | 0.0 | 23.742023 | 29 |
| CGGAAGA | 175 | 0.0 | 23.135084 | 21 |
| GAGCGGT | 175 | 0.0 | 23.135084 | 26 |
| CCGAGAC | 175 | 0.0 | 23.135084 | 45 |
| AGCGGTT | 190 | 0.0 | 21.30863 | 27 |
| AGAGCGG | 195 | 0.0 | 20.762255 | 25 |
| CCGAGAT | 200 | 0.0 | 20.245697 | 14 |
| CGAGATC | 205 | 0.0 | 19.7519 | 15 |
| GAGATCG | 220 | 0.0 | 18.405178 | 16 |
| CGAGACT | 75 | 0.0011123436 | 17.993956 | 39 |
| AAGAGCG | 225 | 0.0 | 17.993954 | 24 |
| ATGCCGA | 245 | 0.0 | 17.44312 | 42 |
| CTTCGTT | 135 | 8.390871E-7 | 16.701248 | 2 |
| TCCAACG | 95 | 2.7764763E-4 | 16.611294 | 5 |