Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378658.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 939736 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTATGC | 70 | 8.1490725E-10 | 32.1405 | 44 |
| AATGCCG | 65 | 1.4048055E-8 | 31.149902 | 21 |
| TCGTATG | 80 | 1.0004442E-10 | 30.933586 | 43 |
| TCTCGTA | 80 | 3.3960532E-9 | 28.122938 | 41 |
| GACCGTC | 65 | 4.874928E-7 | 27.690275 | 29 |
| ACCGTCC | 75 | 5.640868E-8 | 26.99802 | 30 |
| CGTCCTA | 75 | 5.640868E-8 | 26.99802 | 32 |
| GCGGTTC | 60 | 8.1975195E-6 | 26.246677 | 8 |
| GATCGCA | 50 | 0.0022568775 | 22.512724 | 4 |
| CTCGTAT | 90 | 3.2879325E-7 | 22.49835 | 42 |
| AACCGCT | 50 | 0.0022659705 | 22.497152 | 43 |
| ATGCCGA | 95 | 5.53624E-7 | 21.313093 | 22 |
| AAGAGCG | 110 | 9.919859E-8 | 20.466114 | 4 |
| AGACCGT | 100 | 9.057676E-7 | 20.248514 | 28 |
| CCGAGAC | 90 | 8.257644E-6 | 19.997469 | 25 |
| AGAGCGG | 110 | 2.2429322E-6 | 18.419502 | 5 |
| GAGCGGT | 100 | 2.0360607E-5 | 18.01018 | 6 |
| TGCCGAG | 100 | 2.0482183E-5 | 17.997723 | 23 |
| AGCGGTT | 90 | 1.8670256E-4 | 17.497786 | 7 |
| ATCTCGT | 120 | 5.1746883E-6 | 16.873762 | 40 |