Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390683.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1606298 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GACCGTT | 75 | 1.7029342E-6 | 23.992561 | 29 |
| GATCGGA | 80 | 2.9823823E-6 | 22.494429 | 18 |
| CGTTAAC | 80 | 2.983994E-6 | 22.493027 | 32 |
| TCGCTGC | 55 | 0.0039442824 | 20.448208 | 31 |
| GCGTGCG | 55 | 0.0039449935 | 20.44757 | 12 |
| ACCGTTA | 90 | 8.276746E-6 | 19.993801 | 30 |
| AGATCGG | 95 | 1.3191779E-5 | 18.942675 | 17 |
| AACGGGT | 60 | 0.0065244297 | 18.743607 | 12 |
| AGACCGT | 100 | 2.0523748E-5 | 17.994982 | 28 |
| CCGTTAA | 105 | 3.1219613E-5 | 17.137545 | 31 |
| GCCCGCT | 80 | 0.0017144401 | 16.870295 | 28 |
| ATCTCGT | 120 | 5.19097E-6 | 16.869772 | 40 |
| CGGGATT | 190 | 4.5110937E-10 | 16.57484 | 14 |
| TCTCGTA | 95 | 2.8269054E-4 | 16.573809 | 41 |
| ATCGGAA | 110 | 4.649209E-5 | 16.359585 | 19 |
| CTCGTAT | 100 | 4.178166E-4 | 15.745119 | 42 |
| TCGGAAG | 115 | 6.803173E-5 | 15.647323 | 20 |
| ACGGGAT | 225 | 3.0559022E-10 | 14.995817 | 13 |
| ACGAAAT | 200 | 1.5797923E-8 | 14.621378 | 9 |
| TCGTATG | 125 | 1.3850031E-4 | 14.395089 | 43 |