Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390631.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 615085 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TATGCCG | 25 | 0.00210962 | 35.98862 | 43 |
| CCTTCGT | 125 | 1.720764E-8 | 19.84213 | 1 |
| ATCGGAA | 115 | 1.5976366E-7 | 19.559032 | 27 |
| CTTCGTT | 120 | 2.4368637E-7 | 18.789898 | 2 |
| GATCGGA | 120 | 2.5002555E-7 | 18.744072 | 26 |
| CCGTGCC | 60 | 0.0065190224 | 18.744072 | 10 |
| ACCGTGC | 60 | 0.0065190224 | 18.744072 | 9 |
| AGATCGG | 125 | 3.838777E-7 | 17.99431 | 25 |
| TCGGAAG | 125 | 3.838777E-7 | 17.99431 | 28 |
| CGAGATC | 140 | 6.484879E-8 | 17.672983 | 23 |
| CCGAGAC | 120 | 5.180793E-6 | 16.869665 | 45 |
| ATGCCGA | 210 | 1.07320375E-10 | 16.066347 | 19 |
| TCGTATG | 85 | 0.002568761 | 15.877331 | 40 |
| CCGAGAT | 160 | 2.9670628E-7 | 15.4638605 | 22 |
| GCGGTTC | 225 | 2.9467628E-10 | 15.028244 | 5 |
| TTCGTTG | 150 | 2.519033E-6 | 15.028244 | 3 |
| CGTATGC | 90 | 0.0037591779 | 14.995258 | 41 |
| GAGATCG | 150 | 2.5772424E-6 | 14.995257 | 24 |
| TGCCGAG | 230 | 4.2382453E-10 | 14.669274 | 20 |
| AATGCCG | 240 | 8.039933E-10 | 14.058055 | 18 |