Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379319.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 467066 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCGGGAT | 25 | 0.002105831 | 36.0 | 31 |
| ATCTCGT | 30 | 0.0051441668 | 30.000002 | 40 |
| AACCCGG | 85 | 0.0025621087 | 15.882353 | 22 |
| CGTTGGA | 85 | 0.0025621087 | 15.882353 | 5 |
| TTCGTTG | 100 | 0.0075422027 | 13.5 | 3 |
| GCCACCA | 300 | 2.669749E-7 | 10.5 | 6 |
| GGCTAAT | 250 | 4.3314747E-5 | 9.900001 | 18 |
| GCACTCC | 190 | 0.0046097436 | 9.473684 | 16 |
| GCTTGAA | 310 | 4.595069E-6 | 9.435484 | 17 |
| GGAGGTT | 200 | 0.007029957 | 9.0 | 34 |
| CTACTAA | 230 | 0.0022206053 | 8.804348 | 7 |
| TGAGGCA | 320 | 6.8287656E-5 | 8.4375 | 2 |
| GCTCACT | 300 | 3.1511506E-4 | 8.25 | 11 |
| ACTGCAA | 250 | 0.0047188434 | 8.1 | 15 |
| TTGAACC | 340 | 1.3838444E-4 | 7.9411764 | 19 |
| GCTAATT | 375 | 5.0527437E-5 | 7.8 | 19 |
| CACACCT | 265 | 0.00795873 | 7.6415095 | 16 |
| GCCTGGG | 300 | 0.0028655466 | 7.5 | 24 |
| CCACCAC | 300 | 0.0028655466 | 7.5 | 7 |
| CTTGAAC | 425 | 2.9584657E-5 | 7.411765 | 18 |