Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390632.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 4217139 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTAACG | 65 | 4.2490673E-4 | 20.76325 | 32 |
| ATTGCGC | 110 | 2.2218483E-6 | 18.44096 | 5 |
| GATTGCG | 100 | 2.0184832E-5 | 18.03116 | 4 |
| TTACCGG | 80 | 0.0016910947 | 16.90582 | 2 |
| ATCGCGC | 80 | 0.0016921705 | 16.904213 | 5 |
| TCGCGCC | 80 | 0.0016921705 | 16.904213 | 6 |
| GTACGGA | 80 | 0.0016921705 | 16.904213 | 6 |
| ACCGCGC | 145 | 3.117016E-5 | 13.961329 | 9 |
| CCTTCGT | 695 | 0.0 | 13.946784 | 1 |
| GCGGGAT | 115 | 0.0012051116 | 13.692033 | 13 |
| CGTTGGA | 825 | 0.0 | 13.386771 | 5 |
| TCGTTGG | 825 | 0.0 | 13.113571 | 4 |
| CGGGATT | 620 | 0.0 | 13.061062 | 14 |
| ACGCCCG | 245 | 1.627268E-8 | 12.853593 | 12 |
| GATCGGA | 175 | 1.2729921E-5 | 12.853592 | 18 |
| CGCCCGG | 380 | 0.0 | 12.430924 | 13 |
| TTCGTTG | 935 | 0.0 | 12.293973 | 3 |
| TTGCGCC | 165 | 1.0274435E-4 | 12.293972 | 6 |
| ACGGGAT | 655 | 0.0 | 12.019723 | 13 |
| ACCACGC | 680 | 0.0 | 11.57741 | 9 |