Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378740.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 451625 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GAGCGGT | 45 | 3.8380676E-10 | 45.003654 | 6 |
| AAGAGCG | 50 | 1.0768417E-9 | 40.50329 | 4 |
| CGGAAGA | 55 | 2.733941E-9 | 36.829327 | 1 |
| AGCGGTT | 55 | 2.743036E-9 | 36.817093 | 7 |
| CTCGTAT | 50 | 4.869071E-8 | 35.99894 | 42 |
| CGGTTCA | 65 | 3.6561687E-10 | 34.61436 | 9 |
| CGTATGC | 55 | 1.1254269E-7 | 32.726307 | 44 |
| GACCGAG | 55 | 1.1254269E-7 | 32.726307 | 29 |
| ACCGAGT | 55 | 1.1254269E-7 | 32.726307 | 30 |
| TCTCGTA | 55 | 1.1254269E-7 | 32.726307 | 41 |
| CCGAGAC | 55 | 1.1254269E-7 | 32.726307 | 25 |
| AATGCCG | 60 | 2.4141082E-7 | 29.999113 | 21 |
| TCGTATG | 60 | 2.4141082E-7 | 29.999113 | 43 |
| AGAGCGG | 70 | 2.8758222E-8 | 28.93092 | 5 |
| GAGACCG | 65 | 4.863614E-7 | 27.69149 | 27 |
| AGACCGA | 70 | 9.2889786E-7 | 25.713526 | 28 |
| GCGGTTC | 80 | 1.0511394E-7 | 25.311752 | 8 |
| CGTTGCT | 45 | 0.0012256127 | 24.999262 | 29 |
| ATCTCGT | 80 | 2.9688854E-6 | 22.499336 | 40 |
| CGAGTGC | 80 | 2.9688854E-6 | 22.499336 | 32 |