Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390725.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 644856 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGATCGG | 70 | 0.0 | 38.5604 | 17 |
| GATCGGA | 80 | 3.6379788E-12 | 33.74035 | 18 |
| ATCGGAA | 80 | 3.6379788E-12 | 33.74035 | 19 |
| TCGGAAG | 85 | 5.456968E-12 | 31.753157 | 20 |
| ACTTCGG | 30 | 0.005154759 | 29.989092 | 34 |
| AGCGGTT | 105 | 3.6379788E-12 | 27.847015 | 27 |
| AGAGCGG | 105 | 8.54925E-11 | 25.704937 | 25 |
| GAGCGGT | 110 | 1.5279511E-10 | 24.53653 | 26 |
| CCGAGAC | 110 | 1.5279511E-10 | 24.53653 | 45 |
| CGGTTCA | 115 | 2.6557245E-10 | 23.469725 | 29 |
| CGTATGC | 50 | 0.002268327 | 22.491821 | 44 |
| GCGGTTC | 120 | 4.5292836E-10 | 22.49182 | 28 |
| AAGAGCG | 125 | 7.548806E-10 | 21.592146 | 24 |
| CCTTCGT | 100 | 8.8467823E-7 | 20.296144 | 1 |
| GAGATCG | 145 | 2.1827873E-10 | 20.166643 | 16 |
| GAGCCGA | 90 | 8.267967E-6 | 19.99273 | 40 |
| CGGAAGA | 140 | 3.094101E-9 | 19.278704 | 21 |
| ATGCCGA | 145 | 4.782123E-9 | 18.61392 | 11 |
| CGGCATT | 75 | 0.0011116369 | 17.99485 | 17 |
| CGAGATC | 165 | 1.2314558E-9 | 17.722202 | 15 |