Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390607.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 137970 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GGGACCT | 25 | 0.0021018644 | 35.99594 | 6 |
| ACTAGAC | 80 | 2.9462826E-6 | 22.497463 | 19 |
| TAGACAG | 110 | 9.837095E-8 | 20.452238 | 21 |
| AAGGTTA | 55 | 0.0039218324 | 20.452238 | 41 |
| AATATCC | 85 | 1.19242985E-4 | 18.53404 | 3 |
| TATCTTC | 135 | 4.179674E-8 | 18.337912 | 4 |
| GCAGATT | 75 | 0.0011043407 | 17.99797 | 14 |
| CTAGACA | 130 | 5.698894E-7 | 17.30574 | 20 |
| TGCACTC | 85 | 0.002551772 | 15.880563 | 15 |
| CTCAGAA | 180 | 6.731352E-8 | 14.998308 | 35 |
| AATATCT | 195 | 1.776225E-7 | 13.854635 | 2 |
| ATATCTT | 195 | 1.7841194E-7 | 13.849612 | 3 |
| CAGATTC | 100 | 0.0075124614 | 13.498477 | 15 |
| GCACTCC | 100 | 0.0075124614 | 13.498477 | 16 |
| ATTCTCA | 225 | 7.208109E-8 | 12.998534 | 32 |
| TCAGAAA | 210 | 4.4167064E-7 | 12.855694 | 36 |
| AACTGCT | 125 | 0.002236082 | 12.598578 | 41 |
| TTCTCAG | 220 | 7.762137E-7 | 12.271343 | 33 |
| GAAACTT | 150 | 6.3918706E-4 | 11.998647 | 39 |
| CAAATAT | 135 | 0.0038838573 | 11.703529 | 1 |