Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390737.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 789355 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GGGTTCG | 30 | 0.0051542707 | 29.990496 | 23 |
| GATCGGA | 80 | 7.573902E-5 | 19.68251 | 18 |
| GCGCTCC | 85 | 1.20558965E-4 | 18.525888 | 8 |
| AGATCGG | 85 | 1.2061754E-4 | 18.524715 | 17 |
| TCGGAAG | 95 | 2.8247674E-4 | 16.573696 | 20 |
| ATCGGAA | 110 | 4.644623E-5 | 16.35949 | 19 |
| CGCTCCA | 85 | 0.0025674638 | 15.8793335 | 9 |
| CGGTTCA | 110 | 8.600624E-4 | 14.314553 | 29 |
| CGCCACC | 95 | 0.0053088604 | 14.236688 | 5 |
| AGCGCTC | 95 | 0.005380818 | 14.207826 | 7 |
| CCGAGAC | 95 | 0.0053853425 | 14.206026 | 45 |
| AAAGCGC | 115 | 0.0011846271 | 13.720865 | 5 |
| GCGGTTC | 100 | 0.0075609246 | 13.49658 | 28 |
| GAGCGGT | 120 | 0.0016595612 | 13.120842 | 26 |
| CGGAAGA | 130 | 0.0030272321 | 12.111547 | 21 |
| AAGAGCG | 130 | 0.0030272321 | 12.111547 | 24 |
| AGAGCGG | 130 | 0.0030272321 | 12.111547 | 25 |
| AATGCCG | 135 | 0.004010874 | 11.66445 | 10 |
| AGCGGTT | 135 | 0.004012773 | 11.663711 | 27 |
| AAGCGCT | 140 | 0.005182139 | 11.270711 | 6 |