Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390714.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 823735 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACGAGCG | 20 | 7.0414745E-4 | 44.987858 | 15 |
| TGCGTAT | 30 | 0.005154747 | 29.990084 | 28 |
| TCAACGC | 30 | 0.0051562777 | 29.988262 | 12 |
| CCTTCGT | 65 | 1.5020225E-5 | 24.274336 | 1 |
| CCGTGCC | 50 | 0.002264424 | 22.499392 | 10 |
| ATCTTCG | 105 | 5.968468E-8 | 21.473633 | 5 |
| TCTTCGT | 150 | 7.068593E-9 | 18.037851 | 6 |
| ACGGGAT | 90 | 1.8687185E-4 | 17.49528 | 13 |
| CTTCGTA | 140 | 1.2539913E-6 | 16.070993 | 7 |
| CGTGAGC | 135 | 1.5538375E-5 | 15.02697 | 1 |
| CTTCGTT | 110 | 8.46875E-4 | 14.343925 | 2 |
| TCGTATA | 95 | 0.005375263 | 14.210143 | 9 |
| ACGCCCA | 95 | 0.0053882687 | 14.2049675 | 12 |
| CGTATAA | 115 | 0.0012015154 | 13.695283 | 10 |
| TTCGTTG | 150 | 4.1961637E-5 | 13.524274 | 3 |
| TCGTTGG | 120 | 0.0016334652 | 13.148598 | 4 |
| CACGCCC | 120 | 0.0016568076 | 13.123848 | 11 |
| GCCACCG | 160 | 7.6646524E-5 | 12.682863 | 6 |
| TTCGTAT | 125 | 0.002251036 | 12.59966 | 8 |
| TGAGCCG | 180 | 1.69869E-5 | 12.4951105 | 45 |