Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379265.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 529294 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAGAGCG | 25 | 0.0021053243 | 36.002647 | 4 |
| CCGTAAT | 30 | 0.0051453076 | 29.999369 | 15 |
| CGTGAGC | 85 | 0.0025614572 | 15.883519 | 1 |
| GAGCCAC | 205 | 2.1664164E-8 | 14.269341 | 4 |
| GTAGGTC | 100 | 0.007544995 | 13.499717 | 23 |
| CGGGGTT | 125 | 0.0022475002 | 12.600926 | 1 |
| TAGTCCC | 185 | 2.2380545E-5 | 12.161906 | 23 |
| GTAGTCC | 195 | 4.9058883E-4 | 10.384397 | 22 |
| CCTGTAG | 220 | 1.306588E-4 | 10.227058 | 19 |
| CCACCAC | 320 | 6.479695E-7 | 9.843543 | 7 |
| TGTAGTC | 215 | 0.001202119 | 9.4184065 | 21 |
| GGAGGCC | 305 | 3.8940314E-5 | 8.852273 | 40 |
| GCCACCA | 365 | 3.871335E-6 | 8.629956 | 6 |
| TATCTTC | 375 | 5.5645487E-6 | 8.400618 | 4 |
| AGTCCCA | 275 | 0.0012180272 | 8.181646 | 24 |
| GGTGGTG | 275 | 0.0012180272 | 8.181646 | 8 |
| GGTTGCA | 250 | 0.0047218446 | 8.099831 | 37 |
| GTCCCAG | 290 | 0.002056314 | 7.7584577 | 25 |
| CTACTCA | 270 | 0.009410533 | 7.4998426 | 32 |
| TGAGCCA | 335 | 0.001027362 | 7.3886023 | 3 |