Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390606.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 93812 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACCGGCA | 20 | 7.0087507E-4 | 44.988808 | 30 |
| CGTATGC | 25 | 3.869059E-5 | 44.988808 | 44 |
| CTCGTAT | 25 | 3.869059E-5 | 44.988808 | 42 |
| CGGCATA | 25 | 3.869059E-5 | 44.988808 | 32 |
| GACCGGC | 20 | 7.0087507E-4 | 44.988808 | 29 |
| TCTCGTA | 25 | 3.869059E-5 | 44.988808 | 41 |
| TCGTATG | 25 | 3.869059E-5 | 44.988808 | 43 |
| GTATGCC | 30 | 1.133607E-4 | 37.490677 | 45 |
| CCGGCAT | 25 | 0.0020998414 | 35.991047 | 31 |
| GAGACCG | 25 | 0.0020998414 | 35.991047 | 27 |
| AGACCGG | 25 | 0.0020998414 | 35.991047 | 28 |
| CGAGACC | 25 | 0.0020998414 | 35.991047 | 26 |
| ATCTCGT | 35 | 2.8048933E-4 | 32.13486 | 40 |
| CTTCGTA | 30 | 0.0051297084 | 29.99254 | 7 |
| TAGATCT | 40 | 6.1325956E-4 | 28.118004 | 37 |
| GATCTCG | 40 | 6.1325956E-4 | 28.118004 | 39 |
| CGGAAGA | 45 | 0.0012010837 | 25.060574 | 1 |
| CATAGAT | 50 | 0.0022525107 | 22.494404 | 35 |
| TTTGAGA | 50 | 0.0022525107 | 22.494404 | 43 |
| ATAGATC | 55 | 0.0039156973 | 20.449457 | 36 |