Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378677.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1008057 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 85 | 5.456968E-12 | 31.761099 | 41 |
| GACCGTT | 95 | 0.0 | 30.785978 | 29 |
| CGCCCGG | 55 | 4.1679505E-6 | 28.633114 | 13 |
| ACCGTTC | 95 | 2.3646862E-11 | 28.417828 | 30 |
| ATCTCGT | 100 | 4.5474735E-11 | 26.996935 | 40 |
| GAGCGGT | 110 | 5.456968E-12 | 26.606365 | 6 |
| CTCGTAT | 110 | 5.456968E-12 | 26.58789 | 42 |
| AGCGGTT | 110 | 5.456968E-12 | 26.58789 | 7 |
| CCGTTCT | 110 | 1.5279511E-10 | 24.543886 | 31 |
| TCGTATG | 110 | 1.5279511E-10 | 24.54267 | 43 |
| GCGGTTC | 120 | 1.6370905E-11 | 24.372234 | 8 |
| AGAGCGG | 130 | 5.0931703E-11 | 22.513079 | 5 |
| CGGTTCA | 130 | 5.0931703E-11 | 22.497446 | 9 |
| TGCCGAG | 135 | 8.367351E-11 | 21.664207 | 23 |
| GAGACCG | 125 | 7.530616E-10 | 21.597548 | 27 |
| AGACCGT | 125 | 7.530616E-10 | 21.597548 | 28 |
| CGTATGC | 115 | 6.7757355E-9 | 21.519297 | 44 |
| ATGCCGA | 150 | 1.4551915E-11 | 20.997616 | 22 |
| CGTTCTG | 140 | 1.364242E-10 | 20.891521 | 32 |
| CCGAGAC | 130 | 1.2278178E-9 | 20.766872 | 25 |