Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379051.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 669180 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CTCGTAT | 30 | 1.1396574E-4 | 37.498627 | 42 |
| TCTCGTA | 40 | 6.1647466E-4 | 28.123974 | 41 |
| CGCTTGT | 40 | 6.1647466E-4 | 28.123974 | 32 |
| CTCGGGT | 50 | 7.1448696E-5 | 27.005068 | 6 |
| TCGTATG | 45 | 0.00122628 | 24.999086 | 43 |
| CCACCGG | 50 | 0.0022611609 | 22.504223 | 1 |
| ATCTCGT | 50 | 0.0022641087 | 22.49918 | 40 |
| CGTATGC | 50 | 0.0022641087 | 22.49918 | 44 |
| GACCGCT | 50 | 0.0022641087 | 22.49918 | 29 |
| AGACCGC | 50 | 0.0022641087 | 22.49918 | 28 |
| AAGCGGC | 60 | 0.0065006735 | 18.753517 | 4 |
| GCGGTTC | 60 | 0.0065062856 | 18.750715 | 8 |
| ATCCCGA | 60 | 0.0065090936 | 18.749313 | 28 |
| GAGCGGT | 75 | 0.001108168 | 18.003378 | 6 |
| GTATGCC | 105 | 3.110258E-5 | 17.142231 | 45 |
| AGAGCGG | 80 | 0.0017076905 | 16.878166 | 5 |
| CGTTTTA | 85 | 0.002560455 | 15.885334 | 1 |
| CGGGGTT | 100 | 4.1578538E-4 | 15.752956 | 1 |
| CGCCACC | 100 | 4.1578538E-4 | 15.752956 | 5 |
| CCTTCGT | 95 | 0.0053662234 | 14.213194 | 1 |