Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379255.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 686075 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCTCGTA | 50 | 1.9793533E-6 | 31.501478 | 41 |
| GCGGTTC | 60 | 2.4171277E-7 | 29.999224 | 8 |
| TCGTATG | 55 | 4.160198E-6 | 28.637709 | 43 |
| ATCTCGT | 55 | 4.162559E-6 | 28.635622 | 40 |
| CGTATGC | 65 | 4.866579E-7 | 27.693607 | 44 |
| CTCGTAT | 60 | 8.182271E-6 | 26.251234 | 42 |
| CGAAGCT | 60 | 8.186904E-6 | 26.249321 | 32 |
| CTTCGTA | 55 | 1.367658E-4 | 24.544819 | 7 |
| AGCGGTT | 65 | 1.5228941E-5 | 24.23014 | 7 |
| ATCTTCG | 60 | 2.4641023E-4 | 22.502697 | 5 |
| GACCGAA | 70 | 2.7014828E-5 | 22.499416 | 29 |
| GAGCGGT | 70 | 2.7014828E-5 | 22.499416 | 6 |
| ATGCCGA | 85 | 5.028456E-6 | 21.175922 | 22 |
| AGAGCGG | 75 | 4.5949142E-5 | 21.002518 | 5 |
| CGGGATT | 90 | 8.245135E-6 | 19.999483 | 14 |
| CGGAAGA | 80 | 7.546134E-5 | 19.691296 | 1 |
| ACCGAAG | 80 | 7.55883E-5 | 19.686989 | 30 |
| CCGAAGC | 80 | 7.55883E-5 | 19.686989 | 31 |
| CGCCCGG | 95 | 1.3148623E-5 | 18.946878 | 13 |
| TCGTTGG | 120 | 2.489869E-7 | 18.752247 | 4 |