Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379299.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 409649 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCCGCCA | 60 | 0.006499436 | 18.752033 | 3 |
| CGGCTAA | 60 | 0.0065040197 | 18.749746 | 17 |
| ACTAGAC | 100 | 4.15931E-4 | 15.749786 | 19 |
| GCCACCG | 95 | 0.005368686 | 14.210334 | 6 |
| CGTGAGC | 120 | 0.0016488547 | 13.12963 | 1 |
| TGAACCC | 210 | 6.2870604E-6 | 11.785555 | 20 |
| GCCACCA | 255 | 4.652178E-6 | 10.588092 | 6 |
| GGCTAAT | 205 | 7.762963E-4 | 9.877915 | 18 |
| GCTAATT | 320 | 6.4636515E-7 | 9.8436165 | 19 |
| GCTTGAA | 235 | 2.5370592E-4 | 9.574338 | 17 |
| GAGCCAC | 215 | 0.0012008175 | 9.418477 | 4 |
| AGTGAGC | 265 | 8.1941704E-5 | 9.339496 | 43 |
| CACCTGG | 205 | 0.008604455 | 8.780369 | 13 |
| GGAGAAT | 335 | 1.1641114E-4 | 8.059592 | 9 |
| GCAGTGA | 310 | 4.481533E-4 | 7.983763 | 41 |
| CCACCAC | 340 | 1.3827963E-4 | 7.9410686 | 7 |
| CAGTGAG | 320 | 6.298548E-4 | 7.7342696 | 42 |
| AGCTACT | 270 | 0.00940087 | 7.4998984 | 30 |
| TGAGGCA | 400 | 1.12271315E-4 | 7.3132935 | 2 |
| CTAATTT | 495 | 3.800964E-6 | 7.272629 | 20 |