Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390769.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 838758 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGCGCAT | 30 | 0.0051533813 | 29.991774 | 20 |
| ACGCCCG | 65 | 1.5263522E-5 | 24.224123 | 12 |
| TACGAAA | 60 | 0.0065193777 | 18.744858 | 44 |
| TCGTTGG | 160 | 7.9853635E-10 | 18.310074 | 4 |
| CTCGATC | 100 | 2.0482932E-5 | 17.99721 | 10 |
| TCGATCT | 110 | 4.641267E-5 | 16.3611 | 11 |
| CGTTGGA | 180 | 3.8162398E-9 | 16.277567 | 5 |
| GGTTTCG | 85 | 0.0025355497 | 15.909295 | 6 |
| GTTTCGC | 95 | 0.00537994 | 14.2083235 | 7 |
| CGCCCGG | 115 | 0.0012032515 | 13.692713 | 13 |
| TTCGTTG | 170 | 9.244093E-6 | 13.256162 | 3 |
| CCGGCTA | 120 | 0.001658436 | 13.122182 | 16 |
| GCGATCT | 120 | 0.001658436 | 13.122182 | 16 |
| AACCCGG | 155 | 5.8210993E-5 | 13.060933 | 22 |
| CACGCCC | 190 | 2.0630014E-6 | 13.024297 | 11 |
| CCTTCGT | 140 | 3.5569965E-4 | 12.877415 | 1 |
| CGGCTAA | 125 | 0.0022542714 | 12.597295 | 17 |
| GAATCGC | 125 | 0.002255281 | 12.596543 | 12 |
| GAAACGG | 215 | 5.999391E-7 | 12.556193 | 10 |
| ACCACGC | 180 | 1.6946602E-5 | 12.498063 | 9 |