Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1390644.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 979156 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGTCCGT | 25 | 0.0021094582 | 35.9913 | 13 |
| GCGCCGG | 25 | 0.0021105157 | 35.98762 | 38 |
| ATGCGCC | 50 | 0.0022675556 | 22.49456 | 15 |
| CTCGTAT | 70 | 2.709653E-5 | 22.492264 | 42 |
| TATCTCG | 70 | 2.709653E-5 | 22.492264 | 39 |
| GATCGGA | 120 | 1.1090378E-8 | 20.617908 | 18 |
| CGTGAGT | 55 | 0.0039439755 | 20.447512 | 35 |
| GACCGGG | 80 | 7.581547E-5 | 19.68073 | 29 |
| ATCGGAA | 130 | 2.7819624E-8 | 19.031916 | 19 |
| CGTATGC | 85 | 1.2073887E-4 | 18.52304 | 44 |
| TCTCGTA | 85 | 1.2073887E-4 | 18.52304 | 41 |
| AGATCGG | 140 | 6.490882E-8 | 17.674297 | 17 |
| GAGACCG | 90 | 1.8695016E-4 | 17.494877 | 27 |
| AGACCGG | 90 | 1.8695016E-4 | 17.494877 | 28 |
| TCGGAAG | 145 | 9.701034E-8 | 17.063095 | 20 |
| GCGCCCG | 80 | 0.0017133695 | 16.870922 | 12 |
| TCGTATG | 95 | 2.826223E-4 | 16.573246 | 43 |
| GCCACCG | 150 | 1.3891258E-7 | 16.534008 | 6 |
| GCATGCG | 85 | 0.002568941 | 15.878513 | 13 |
| CGGGAGT | 115 | 6.800808E-5 | 15.646792 | 32 |