Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379026.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 645076 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AGACCGA | 40 | 3.4566256E-7 | 39.37276 | 28 |
| CGCAAGT | 25 | 0.0021070128 | 35.99795 | 10 |
| ACCGACC | 45 | 8.6959335E-7 | 34.99801 | 30 |
| CTCGTAT | 40 | 1.5592888E-5 | 33.750698 | 42 |
| TCGTATG | 40 | 1.5592888E-5 | 33.750698 | 43 |
| GACCGAC | 50 | 1.9807158E-6 | 31.498209 | 29 |
| GAGACCG | 50 | 1.9807158E-6 | 31.498209 | 27 |
| ACTCGTG | 30 | 0.005137286 | 30.009926 | 1 |
| AAGGGCG | 30 | 0.0051450827 | 30.000622 | 42 |
| CGTATGC | 45 | 3.4880024E-5 | 30.000618 | 44 |
| TCTCGTA | 45 | 3.4880024E-5 | 30.000618 | 41 |
| CGACCCA | 60 | 8.187877E-6 | 26.248508 | 32 |
| AGCGGTT | 60 | 8.187877E-6 | 26.248508 | 7 |
| AATGCCG | 60 | 8.187877E-6 | 26.248508 | 21 |
| CACCGCG | 45 | 0.0012263777 | 24.998579 | 8 |
| GAGCGGT | 65 | 1.5194206E-5 | 24.236906 | 6 |
| GCGGTTC | 65 | 1.52307475E-5 | 24.229393 | 8 |
| CGGTTCA | 65 | 1.52307475E-5 | 24.229393 | 9 |
| CGGGATT | 65 | 1.52307475E-5 | 24.229393 | 14 |
| CCGACCC | 65 | 1.52307475E-5 | 24.229393 | 31 |