Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1379307.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 476605 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| GCGGTTC | 50 | 4.870344E-8 | 35.998657 | 8 |
| AGACCGA | 50 | 4.870344E-8 | 35.998657 | 28 |
| CGTATGC | 45 | 8.6882574E-7 | 34.998695 | 44 |
| CCGATGT | 55 | 1.12468115E-7 | 32.729485 | 31 |
| CGGTTCA | 55 | 1.125718E-7 | 32.72605 | 9 |
| GACCGAT | 55 | 1.125718E-7 | 32.72605 | 29 |
| AGCGGTT | 55 | 1.125718E-7 | 32.72605 | 7 |
| GAGACCG | 55 | 1.125718E-7 | 32.72605 | 27 |
| TGCCGAG | 55 | 1.125718E-7 | 32.72605 | 23 |
| ACCGCGC | 35 | 2.8185334E-4 | 32.14166 | 9 |
| TCTCGTA | 50 | 1.9789786E-6 | 31.498825 | 41 |
| ACCGCAA | 30 | 0.00514521 | 29.998882 | 18 |
| CCGCGCC | 45 | 3.4874894E-5 | 29.998882 | 10 |
| ATGCCGA | 60 | 2.4147448E-7 | 29.998882 | 22 |
| CGATGTG | 70 | 2.8769136E-8 | 28.930527 | 32 |
| ATCTCGT | 55 | 4.159425E-6 | 28.635296 | 40 |
| CTCGTAT | 55 | 4.159425E-6 | 28.635296 | 42 |
| ACCGATG | 80 | 3.3851393E-9 | 28.123951 | 30 |
| CACCGCG | 40 | 6.1621494E-4 | 28.123951 | 8 |
| GAGCGGT | 65 | 4.8649053E-7 | 27.691275 | 6 |