Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378672.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 1300066 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TCGCGAC | 25 | 0.002108138 | 35.99677 | 16 |
| CTCGTAT | 140 | 0.0 | 35.35533 | 42 |
| CGTATCC | 140 | 0.0 | 35.35533 | 32 |
| CGTATGC | 145 | 0.0 | 34.137493 | 44 |
| GACCGTA | 145 | 0.0 | 34.13487 | 29 |
| TCTCGTA | 155 | 0.0 | 31.933844 | 41 |
| ACCGTAT | 155 | 0.0 | 31.932617 | 30 |
| CGGTTCA | 175 | 0.0 | 30.854374 | 9 |
| TCGTATG | 170 | 0.0 | 30.439615 | 43 |
| ATGCCGA | 185 | 0.0 | 30.402676 | 22 |
| CCGTATC | 165 | 0.0 | 29.998463 | 31 |
| GCGGTTC | 180 | 0.0 | 29.997307 | 8 |
| AATGCCG | 190 | 0.0 | 29.602608 | 21 |
| AGAGCGG | 185 | 0.0 | 29.200047 | 5 |
| AGCGGTT | 190 | 0.0 | 28.418503 | 7 |
| ATCTCGT | 185 | 0.0 | 27.971539 | 40 |
| CCGAGAC | 180 | 0.0 | 27.49753 | 25 |
| TGCCGAG | 210 | 0.0 | 26.783312 | 23 |
| GAGCGGT | 205 | 0.0 | 26.35126 | 6 |
| GAGACCG | 195 | 0.0 | 25.382338 | 27 |