Basic Statistics
| Measure | Value |
|---|---|
| Filename | ERR1378747.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 772655 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CGCCTAT | 30 | 0.005146552 | 29.999613 | 18 |
| CTCGTAT | 50 | 7.156045E-5 | 26.999651 | 42 |
| TCTCGTA | 50 | 7.156045E-5 | 26.999651 | 41 |
| TCGTATG | 50 | 7.156045E-5 | 26.999651 | 43 |
| CGGCTAG | 50 | 7.156045E-5 | 26.999651 | 32 |
| AAAGCGC | 80 | 1.05232175E-7 | 25.313808 | 5 |
| CGTATGC | 55 | 1.3677558E-4 | 24.545137 | 44 |
| AATGCCG | 55 | 1.3677558E-4 | 24.545137 | 21 |
| GCCTCGA | 60 | 2.4667097E-4 | 22.49971 | 22 |
| GAGACCG | 70 | 2.7017824E-5 | 22.499708 | 27 |
| ATCTTCG | 140 | 1.364242E-10 | 20.89394 | 5 |
| ACCGGCT | 65 | 4.2368687E-4 | 20.768963 | 30 |
| CGTGAAC | 65 | 4.2368687E-4 | 20.768963 | 35 |
| TTCGTTG | 110 | 9.961332E-8 | 20.456928 | 3 |
| ATGGCGT | 55 | 0.003935682 | 20.45428 | 31 |
| CGGTTCA | 55 | 0.003935682 | 20.45428 | 9 |
| AGCGCTC | 55 | 0.003935682 | 20.45428 | 7 |
| AAGCGCT | 100 | 9.042542E-7 | 20.251049 | 6 |
| CGGAAGA | 70 | 6.975164E-4 | 19.28796 | 1 |
| GAGCGGT | 70 | 6.978203E-4 | 19.286713 | 6 |