Number of Reads | 567,549,380 |
Valid Barcodes | 90.0% |
Sequencing Saturation | 85.2% |
Q30 Bases in Barcode | 95.9% |
Q30 Bases in RNA Read | 92.6% |
Q30 Bases in RNA Read 2 | 89.6% |
Q30 Bases in Sample Index | 91.8% |
Q30 Bases in UMI | 95.5% |
Reads Mapped to Genome | 90.1% |
Reads Mapped Confidently to Genome | 87.5% |
Reads Mapped Confidently to Intergenic Regions | 8.4% |
Reads Mapped Confidently to Intronic Regions | 7.5% |
Reads Mapped Confidently to Exonic Regions | 74.0% |
Reads Mapped Confidently to Transcriptome | 67.7% |
Reads Mapped Antisense to Gene | 5.1% |
Estimated Number of Cells | 8,000 |
Fraction Reads in Cells | 96.7% |
Mean Reads per Cell | 70,943 |
Median Genes per Cell | 1,235 |
Total Genes Detected | 18,313 |
Median UMI Counts per Cell | 3,683 |
Name | vdj_v1_mm_balbc_pbmc_5gex |
Description | PBMCs from BALB/c mice - 5' gene expression |
Transcriptome | mm10 |
Chemistry | Single Cell 5' PE |
Cell Ranger Version | 3.0.0 |
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