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Nuclear RNA-seq of single neurons reveals molecular signatures of activation.


Single-cell sequencing methods have emerged as powerful tools for identification of heterogeneous cell types within defined brain regions. Application of single-cell techniques to study the transcriptome of activated neurons can offer insight into molecular dynamics associated with differential neuronal responses to a given experience. Through evaluation of common whole-cell and single-nuclei RNA-sequencing (snRNA-seq) methods, here we show that snRNA-seq faithfully recapitulates transcriptional patterns associated with experience-driven induction of activity, including immediate early genes (IEGs) such as Fos, Arc and Egr1. SnRNA-seq of mouse dentate granule cells reveals large-scale changes in the activated neuronal transcriptome after brief novel environment exposure, including induction of MAPK pathway genes. In addition, we observe a continuum of activation states, revealing a pseudotemporal pattern of activation from gene expression alone. In summary, snRNA-seq of activated neurons enables the examination of gene expression beyond IEGs, allowing for novel insights into neuronal activation patterns in vivo.

GSE77067 Samples



Cell Metadata and BAM Files

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BAM Files Run Accession Number Sample Accession Number Organism Organ/Tissue Dev. Stage Cell Type Sequencer Protocol Assay Type Library Layout Ontology Term Cell Cycle Phase
SRR3110988 SAMN04432277 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2.M
SRR3110989 SAMN04432278 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3110990 SAMN04432279 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3110991 SAMN04432280 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3110992 SAMN04432281 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3110993 SAMN04432282 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3110994 SAMN04432283 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3110995 SAMN04432284 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3110996 SAMN04432285 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3110997 SAMN04432286 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3110998 SAMN04432287 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3110999 SAMN04432288 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111000 SAMN04432289 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111001 SAMN04432290 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111002 SAMN04432291 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111003 SAMN04432292 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G1.S
SRR3111004 SAMN04432224 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111005 SAMN04432225 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2.M
SRR3111006 SAMN04432226 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111007 SAMN04432227 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111008 SAMN04432293 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111009 SAMN04432294 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111010 SAMN04432295 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111011 SAMN04432296 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111012 SAMN04432228 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111013 SAMN04432229 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111014 SAMN04432230 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111015 SAMN04432231 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111016 SAMN04432232 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111017 SAMN04432233 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111018 SAMN04432234 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111019 SAMN04432235 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111020 SAMN04432236 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111021 SAMN04432237 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2.M
SRR3111022 SAMN04432238 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111023 SAMN04432239 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111024 SAMN04432240 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2.M
SRR3111025 SAMN04432241 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111026 SAMN04432242 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111027 SAMN04432243 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2.M
SRR3111028 SAMN04432244 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2.M
SRR3111029 SAMN04432245 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111030 SAMN04432246 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111031 SAMN04432247 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111032 SAMN04432248 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111033 SAMN04432249 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111034 SAMN04432250 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111035 SAMN04432251 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111036 SAMN04432252 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111037 SAMN04432253 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111038 SAMN04432327 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111039 SAMN04432328 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111040 SAMN04432329 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111041 SAMN04432330 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111042 SAMN04432331 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111043 SAMN04432332 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111044 SAMN04432333 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111045 SAMN04432334 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G1.S
SRR3111046 SAMN04432335 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111047 SAMN04432336 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111048 SAMN04432337 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111049 SAMN04432338 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111050 SAMN04432339 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111051 SAMN04432340 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111052 SAMN04432341 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111053 SAMN04432342 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111054 SAMN04432343 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111055 SAMN04432344 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111056 SAMN04432404 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G1.S
SRR3111057 SAMN04432345 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111058 SAMN04432346 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111059 SAMN04432347 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111060 SAMN04432348 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111061 SAMN04432349 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111062 SAMN04432350 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111063 SAMN04432351 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111064 SAMN04432352 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111065 SAMN04432353 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111066 SAMN04432354 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111067 SAMN04432355 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2
SRR3111068 SAMN04432356 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2.M
SRR3111069 SAMN04432297 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2.M
SRR3111070 SAMN04432298 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111071 SAMN04432299 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G1.S
SRR3111072 SAMN04432300 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G1.S
SRR3111073 SAMN04432301 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111074 SAMN04432302 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111075 SAMN04432303 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G1.S
SRR3111076 SAMN04432304 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G1.S
SRR3111077 SAMN04432305 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111078 SAMN04432306 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111079 SAMN04432307 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111080 SAMN04432308 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111081 SAMN04432309 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G1.S
SRR3111082 SAMN04432310 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G1.S
SRR3111083 SAMN04432311 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111084 SAMN04432312 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111085 SAMN04432313 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2.M
SRR3111086 SAMN04432314 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] M.G1
SRR3111087 SAMN04432315 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G1.S
SRR3111088 SAMN04432316 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2.M
SRR3111089 SAMN04432317 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111090 SAMN04432318 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G2.M
SRR3111091 SAMN04432319 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] S
SRR3111092 SAMN04432320 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Paired-End BTO:0005750 [dentate granule cell] G1.S
SRR3111093 SAMN04432321 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111094 SAMN04432322 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111095 SAMN04432323 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111096 SAMN04432324 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111097 SAMN04432325 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111098 SAMN04432363 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111099 SAMN04432326 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111100 SAMN04432357 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111101 SAMN04432358 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111102 SAMN04432359 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111103 SAMN04432360 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111104 SAMN04432361 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111105 SAMN04432362 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2.M
SRR3111106 SAMN04432364 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111107 SAMN04432365 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2
SRR3111108 SAMN04432366 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2.M
SRR3111109 SAMN04432367 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111110 SAMN04432368 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111111 SAMN04432369 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111112 SAMN04432370 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111113 SAMN04432371 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111114 SAMN04432372 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111115 SAMN04432373 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111116 SAMN04432374 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111117 SAMN04432375 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111118 SAMN04432376 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2.M
SRR3111119 SAMN04432377 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2.M
SRR3111120 SAMN04432378 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111121 SAMN04432379 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111122 SAMN04432380 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111123 SAMN04432383 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2
SRR3111124 SAMN04432384 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111125 SAMN04432385 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111126 SAMN04432386 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111127 SAMN04432254 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111128 SAMN04432255 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111129 SAMN04432381 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2.M
SRR3111130 SAMN04432382 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2.M
SRR3111131 SAMN04432256 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111132 SAMN04432257 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111133 SAMN04432258 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111134 SAMN04432259 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111135 SAMN04432260 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111136 SAMN04432261 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111137 SAMN04432262 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111138 SAMN04432263 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111139 SAMN04432264 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111140 SAMN04432265 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111141 SAMN04432266 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2.M
SRR3111142 SAMN04432387 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111143 SAMN04432388 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111144 SAMN04432389 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111145 SAMN04432390 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111146 SAMN04432391 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111147 SAMN04432392 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111148 SAMN04432393 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111149 SAMN04432394 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111150 SAMN04432395 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111151 SAMN04432396 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111152 SAMN04432397 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111153 SAMN04432398 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111154 SAMN04432399 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111155 SAMN04432400 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111156 SAMN04432401 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2
SRR3111157 SAMN04432410 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2.M
SRR3111158 SAMN04432411 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2.M
SRR3111159 SAMN04432402 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2
SRR3111160 SAMN04432403 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2.M
SRR3111161 SAMN04432405 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111162 SAMN04432406 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111163 SAMN04432407 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2.M
SRR3111164 SAMN04432408 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111165 SAMN04432409 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111166 SAMN04432412 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111167 SAMN04432413 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111168 SAMN04432414 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111169 SAMN04432415 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111170 SAMN04432416 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2.M
SRR3111171 SAMN04432417 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111172 SAMN04432418 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111173 SAMN04432419 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111174 SAMN04432420 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2
SRR3111175 SAMN04432421 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111176 SAMN04432422 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111177 SAMN04432423 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G2
SRR3111178 SAMN04432424 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111179 SAMN04432425 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111180 SAMN04432426 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111181 SAMN04432427 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111182 SAMN04432428 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111183 SAMN04432429 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] M.G1
SRR3111184 SAMN04432430 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S
SRR3111185 SAMN04432431 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111186 SAMN04432432 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111187 SAMN04432433 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] G1.S
SRR3111188 SAMN04432434 Mus musculus Brain Adult Dentate granule cell Illumina HiSeq 2500 SMARTer RNA-Seq Single-End BTO:0005750 [dentate granule cell] S

FASTQC Report



FASTQC File ID Cell Accession Number FASTQC Report Link No. Sequence Tags
SRR3110988_1 SRR3110988 Preview 4133570
SRR3110988_2 SRR3110988 Preview 4133570
SRR3110989_1 SRR3110989 Preview 3419106
SRR3110989_2 SRR3110989 Preview 3419106
SRR3110990_1 SRR3110990 Preview 15814
SRR3110990_2 SRR3110990 Preview 15814
SRR3110991_1 SRR3110991 Preview 5316630
SRR3110991_2 SRR3110991 Preview 5316630
SRR3110992_1 SRR3110992 Preview 3976846
SRR3110992_2 SRR3110992 Preview 3976846
SRR3110993_1 SRR3110993 Preview 4094166
SRR3110993_2 SRR3110993 Preview 4094166
SRR3110994_1 SRR3110994 Preview 6190544
SRR3110994_2 SRR3110994 Preview 6190544
SRR3110995_1 SRR3110995 Preview 5404971
SRR3110995_2 SRR3110995 Preview 5404971
SRR3110996_1 SRR3110996 Preview 4902938
SRR3110996_2 SRR3110996 Preview 4902938
SRR3110997_1 SRR3110997 Preview 4891916
SRR3110997_2 SRR3110997 Preview 4891916
SRR3110998_1 SRR3110998 Preview 7167443
SRR3110998_2 SRR3110998 Preview 7167443
SRR3110999_1 SRR3110999 Preview 4925803
SRR3110999_2 SRR3110999 Preview 4925803
SRR3111000_1 SRR3111000 Preview 3337695
SRR3111000_2 SRR3111000 Preview 3337695
SRR3111001_1 SRR3111001 Preview 13526
SRR3111001_2 SRR3111001 Preview 13526
SRR3111002_1 SRR3111002 Preview 4458637
SRR3111002_2 SRR3111002 Preview 4458637
SRR3111003_1 SRR3111003 Preview 4526797
SRR3111003_2 SRR3111003 Preview 4526797
SRR3111004_1 SRR3111004 Preview 5065584
SRR3111004_2 SRR3111004 Preview 5065584
SRR3111005_1 SRR3111005 Preview 5680621
SRR3111005_2 SRR3111005 Preview 5680621
SRR3111006_1 SRR3111006 Preview 7977827
SRR3111006_2 SRR3111006 Preview 7977827
SRR3111007_1 SRR3111007 Preview 6097370
SRR3111007_2 SRR3111007 Preview 6097370
SRR3111008_1 SRR3111008 Preview 3296449
SRR3111008_2 SRR3111008 Preview 3296449
SRR3111009_1 SRR3111009 Preview 3190607
SRR3111009_2 SRR3111009 Preview 3190607
SRR3111010_1 SRR3111010 Preview 3772528
SRR3111010_2 SRR3111010 Preview 3772528
SRR3111011_1 SRR3111011 Preview 6465413
SRR3111011_2 SRR3111011 Preview 6465413
SRR3111012_1 SRR3111012 Preview 6023261
SRR3111012_2 SRR3111012 Preview 6023261
SRR3111013_1 SRR3111013 Preview 7698383
SRR3111013_2 SRR3111013 Preview 7698383
SRR3111014_1 SRR3111014 Preview 5057608
SRR3111014_2 SRR3111014 Preview 5057608
SRR3111015_1 SRR3111015 Preview 6853353
SRR3111015_2 SRR3111015 Preview 6853353
SRR3111016_1 SRR3111016 Preview 4705117
SRR3111016_2 SRR3111016 Preview 4705117
SRR3111017_1 SRR3111017 Preview 5344692
SRR3111017_2 SRR3111017 Preview 5344692
SRR3111018_1 SRR3111018 Preview 15205
SRR3111018_2 SRR3111018 Preview 15205
SRR3111019_1 SRR3111019 Preview 4805360
SRR3111019_2 SRR3111019 Preview 4805360
SRR3111020_1 SRR3111020 Preview 7178172
SRR3111020_2 SRR3111020 Preview 7178172
SRR3111021_1 SRR3111021 Preview 6708791
SRR3111021_2 SRR3111021 Preview 6708791
SRR3111022_1 SRR3111022 Preview 9228520
SRR3111022_2 SRR3111022 Preview 9228520
SRR3111023_1 SRR3111023 Preview 7028598
SRR3111023_2 SRR3111023 Preview 7028598
SRR3111024_1 SRR3111024 Preview 6029532
SRR3111024_2 SRR3111024 Preview 6029532
SRR3111025_1 SRR3111025 Preview 6613602
SRR3111025_2 SRR3111025 Preview 6613602
SRR3111026_1 SRR3111026 Preview 7721910
SRR3111026_2 SRR3111026 Preview 7721910
SRR3111027_1 SRR3111027 Preview 6180448
SRR3111027_2 SRR3111027 Preview 6180448
SRR3111028_1 SRR3111028 Preview 5357099
SRR3111028_2 SRR3111028 Preview 5357099
SRR3111029_1 SRR3111029 Preview 6422235
SRR3111029_2 SRR3111029 Preview 6422235
SRR3111030_1 SRR3111030 Preview 2987833
SRR3111030_2 SRR3111030 Preview 2987833
SRR3111031_1 SRR3111031 Preview 4957895
SRR3111031_2 SRR3111031 Preview 4957895
SRR3111032_1 SRR3111032 Preview 5322585
SRR3111032_2 SRR3111032 Preview 5322585
SRR3111033_1 SRR3111033 Preview 4342981
SRR3111033_2 SRR3111033 Preview 4342981
SRR3111034_1 SRR3111034 Preview 9126903
SRR3111034_2 SRR3111034 Preview 9126903
SRR3111035_1 SRR3111035 Preview 7226599
SRR3111035_2 SRR3111035 Preview 7226599
SRR3111036_1 SRR3111036 Preview 8166285
SRR3111036_2 SRR3111036 Preview 8166285
SRR3111037_1 SRR3111037 Preview 7331356
SRR3111037_2 SRR3111037 Preview 7331356
SRR3111038_1 SRR3111038 Preview 6918397
SRR3111038_2 SRR3111038 Preview 6918397
SRR3111039_1 SRR3111039 Preview 5636173
SRR3111039_2 SRR3111039 Preview 5636173
SRR3111040_1 SRR3111040 Preview 2624398
SRR3111040_2 SRR3111040 Preview 2624398
SRR3111041_1 SRR3111041 Preview 4388982
SRR3111041_2 SRR3111041 Preview 4388982
SRR3111042_1 SRR3111042 Preview 6192044
SRR3111042_2 SRR3111042 Preview 6192044
SRR3111043_1 SRR3111043 Preview 7201102
SRR3111043_2 SRR3111043 Preview 7201102
SRR3111044_1 SRR3111044 Preview 4616944
SRR3111044_2 SRR3111044 Preview 4616944
SRR3111045_1 SRR3111045 Preview 12793865
SRR3111045_2 SRR3111045 Preview 12793865
SRR3111046_1 SRR3111046 Preview 5804653
SRR3111046_2 SRR3111046 Preview 5804653
SRR3111047_1 SRR3111047 Preview 6471269
SRR3111047_2 SRR3111047 Preview 6471269
SRR3111048_1 SRR3111048 Preview 5409744
SRR3111048_2 SRR3111048 Preview 5409744
SRR3111049_1 SRR3111049 Preview 4288667
SRR3111049_2 SRR3111049 Preview 4288667
SRR3111050_1 SRR3111050 Preview 3859052
SRR3111050_2 SRR3111050 Preview 3859052
SRR3111051_1 SRR3111051 Preview 5756140
SRR3111051_2 SRR3111051 Preview 5756140
SRR3111052_1 SRR3111052 Preview 5082437
SRR3111052_2 SRR3111052 Preview 5082437
SRR3111053_1 SRR3111053 Preview 5932100
SRR3111053_2 SRR3111053 Preview 5932100
SRR3111054_1 SRR3111054 Preview 4745482
SRR3111054_2 SRR3111054 Preview 4745482
SRR3111055_1 SRR3111055 Preview 6745400
SRR3111055_2 SRR3111055 Preview 6745400
SRR3111056_1 SRR3111056 Preview 6465180
SRR3111056_2 SRR3111056 Preview 6465180
SRR3111057_1 SRR3111057 Preview 6074669
SRR3111057_2 SRR3111057 Preview 6074669
SRR3111058_1 SRR3111058 Preview 4939085
SRR3111058_2 SRR3111058 Preview 4939085
SRR3111059_1 SRR3111059 Preview 3858493
SRR3111059_2 SRR3111059 Preview 3858493
SRR3111060_1 SRR3111060 Preview 2584695
SRR3111060_2 SRR3111060 Preview 2584695
SRR3111061_1 SRR3111061 Preview 3879736
SRR3111061_2 SRR3111061 Preview 3879736
SRR3111062_1 SRR3111062 Preview 2579102
SRR3111062_2 SRR3111062 Preview 2579102
SRR3111063_1 SRR3111063 Preview 7678218
SRR3111063_2 SRR3111063 Preview 7678218
SRR3111064_1 SRR3111064 Preview 3851972
SRR3111064_2 SRR3111064 Preview 3851972
SRR3111065_1 SRR3111065 Preview 3629305
SRR3111065_2 SRR3111065 Preview 3629305
SRR3111066_1 SRR3111066 Preview 7357139
SRR3111066_2 SRR3111066 Preview 7357139
SRR3111067_1 SRR3111067 Preview 7793437
SRR3111067_2 SRR3111067 Preview 7793437
SRR3111068_1 SRR3111068 Preview 3114236
SRR3111068_2 SRR3111068 Preview 3114236
SRR3111069_1 SRR3111069 Preview 2909816
SRR3111069_2 SRR3111069 Preview 2909816
SRR3111070_1 SRR3111070 Preview 2795254
SRR3111070_2 SRR3111070 Preview 2795254
SRR3111071_1 SRR3111071 Preview 3603643
SRR3111071_2 SRR3111071 Preview 3603643
SRR3111072_1 SRR3111072 Preview 4112173
SRR3111072_2 SRR3111072 Preview 4112173
SRR3111073_1 SRR3111073 Preview 3743490
SRR3111073_2 SRR3111073 Preview 3743490
SRR3111074_1 SRR3111074 Preview 2811290
SRR3111074_2 SRR3111074 Preview 2811290
SRR3111075_1 SRR3111075 Preview 2728981
SRR3111075_2 SRR3111075 Preview 2728981
SRR3111076_1 SRR3111076 Preview 5200978
SRR3111076_2 SRR3111076 Preview 5200978
SRR3111077_1 SRR3111077 Preview 2643841
SRR3111077_2 SRR3111077 Preview 2643841
SRR3111078_1 SRR3111078 Preview 2104812
SRR3111078_2 SRR3111078 Preview 2104812
SRR3111079_1 SRR3111079 Preview 1973238
SRR3111079_2 SRR3111079 Preview 1973238
SRR3111080_1 SRR3111080 Preview 3093080
SRR3111080_2 SRR3111080 Preview 3093080
SRR3111081_1 SRR3111081 Preview 3710094
SRR3111081_2 SRR3111081 Preview 3710094
SRR3111082_1 SRR3111082 Preview 3710519
SRR3111082_2 SRR3111082 Preview 3710519
SRR3111083_1 SRR3111083 Preview 3763236
SRR3111083_2 SRR3111083 Preview 3763236
SRR3111084_1 SRR3111084 Preview 4416249
SRR3111084_2 SRR3111084 Preview 4416249
SRR3111085_1 SRR3111085 Preview 5023045
SRR3111085_2 SRR3111085 Preview 5023045
SRR3111086_1 SRR3111086 Preview 3704079
SRR3111086_2 SRR3111086 Preview 3704079
SRR3111087_1 SRR3111087 Preview 3814100
SRR3111087_2 SRR3111087 Preview 3814100
SRR3111088_1 SRR3111088 Preview 2835902
SRR3111088_2 SRR3111088 Preview 2835902
SRR3111089_1 SRR3111089 Preview 3934891
SRR3111089_2 SRR3111089 Preview 3934891
SRR3111090_1 SRR3111090 Preview 3451030
SRR3111090_2 SRR3111090 Preview 3451030
SRR3111091_1 SRR3111091 Preview 3100541
SRR3111091_2 SRR3111091 Preview 3100541
SRR3111092_1 SRR3111092 Preview 3586169
SRR3111092_2 SRR3111092 Preview 3586169
SRR3111093_1 SRR3111093 Preview 5135738
SRR3111094_1 SRR3111094 Preview 5323516
SRR3111095_1 SRR3111095 Preview 5876513
SRR3111096_1 SRR3111096 Preview 5515921
SRR3111097_1 SRR3111097 Preview 4197150
SRR3111098_1 SRR3111098 Preview 5528581
SRR3111099_1 SRR3111099 Preview 5294373
SRR3111100_1 SRR3111100 Preview 5707589
SRR3111101_1 SRR3111101 Preview 5104342
SRR3111102_1 SRR3111102 Preview 4841400
SRR3111103_1 SRR3111103 Preview 5328520
SRR3111104_1 SRR3111104 Preview 5508068
SRR3111105_1 SRR3111105 Preview 5419886
SRR3111106_1 SRR3111106 Preview 5798976
SRR3111107_1 SRR3111107 Preview 5651900
SRR3111108_1 SRR3111108 Preview 5468660
SRR3111109_1 SRR3111109 Preview 5659693
SRR3111110_1 SRR3111110 Preview 5173414
SRR3111111_1 SRR3111111 Preview 5587832
SRR3111112_1 SRR3111112 Preview 6124455
SRR3111113_1 SRR3111113 Preview 5742039
SRR3111114_1 SRR3111114 Preview 5748399
SRR3111115_1 SRR3111115 Preview 5215375
SRR3111116_1 SRR3111116 Preview 5339220
SRR3111117_1 SRR3111117 Preview 3602858
SRR3111118_1 SRR3111118 Preview 5122071
SRR3111119_1 SRR3111119 Preview 5873043
SRR3111120_1 SRR3111120 Preview 4305870
SRR3111121_1 SRR3111121 Preview 2514584
SRR3111122_1 SRR3111122 Preview 4296835
SRR3111123_1 SRR3111123 Preview 3361076
SRR3111124_1 SRR3111124 Preview 4650109
SRR3111125_1 SRR3111125 Preview 6070922
SRR3111126_1 SRR3111126 Preview 6246370
SRR3111127_1 SRR3111127 Preview 4715768
SRR3111128_1 SRR3111128 Preview 4767069
SRR3111129_1 SRR3111129 Preview 6847613
SRR3111130_1 SRR3111130 Preview 4946816
SRR3111131_1 SRR3111131 Preview 4340588
SRR3111132_1 SRR3111132 Preview 3223565
SRR3111133_1 SRR3111133 Preview 3936929
SRR3111134_1 SRR3111134 Preview 2964059
SRR3111135_1 SRR3111135 Preview 2463411
SRR3111136_1 SRR3111136 Preview 5840605
SRR3111137_1 SRR3111137 Preview 5949726
SRR3111138_1 SRR3111138 Preview 5154872
SRR3111139_1 SRR3111139 Preview 5056891
SRR3111140_1 SRR3111140 Preview 4578244
SRR3111141_1 SRR3111141 Preview 5258064
SRR3111142_1 SRR3111142 Preview 4587114
SRR3111143_1 SRR3111143 Preview 4864454
SRR3111144_1 SRR3111144 Preview 3973797
SRR3111145_1 SRR3111145 Preview 5202032
SRR3111146_1 SRR3111146 Preview 5756276
SRR3111147_1 SRR3111147 Preview 3282190
SRR3111148_1 SRR3111148 Preview 5227014
SRR3111149_1 SRR3111149 Preview 5330044
SRR3111150_1 SRR3111150 Preview 4645321
SRR3111151_1 SRR3111151 Preview 4278500
SRR3111152_1 SRR3111152 Preview 4098579
SRR3111153_1 SRR3111153 Preview 4840224
SRR3111154_1 SRR3111154 Preview 6076787
SRR3111155_1 SRR3111155 Preview 6628970
SRR3111156_1 SRR3111156 Preview 4323682
SRR3111157_1 SRR3111157 Preview 6116157
SRR3111158_1 SRR3111158 Preview 4567127
SRR3111159_1 SRR3111159 Preview 4151150
SRR3111160_1 SRR3111160 Preview 4125898
SRR3111161_1 SRR3111161 Preview 5994460
SRR3111162_1 SRR3111162 Preview 4994018
SRR3111163_1 SRR3111163 Preview 4122638
SRR3111164_1 SRR3111164 Preview 3661527
SRR3111165_1 SRR3111165 Preview 4402156
SRR3111166_1 SRR3111166 Preview 5125274
SRR3111167_1 SRR3111167 Preview 5714344
SRR3111168_1 SRR3111168 Preview 4578753
SRR3111169_1 SRR3111169 Preview 5068709
SRR3111170_1 SRR3111170 Preview 5842360
SRR3111171_1 SRR3111171 Preview 4642324
SRR3111172_1 SRR3111172 Preview 5487510
SRR3111173_1 SRR3111173 Preview 4727935
SRR3111174_1 SRR3111174 Preview 3223408
SRR3111175_1 SRR3111175 Preview 5283443
SRR3111176_1 SRR3111176 Preview 5105540
SRR3111177_1 SRR3111177 Preview 2425122
SRR3111178_1 SRR3111178 Preview 5987416
SRR3111179_1 SRR3111179 Preview 5927340
SRR3111180_1 SRR3111180 Preview 2628496
SRR3111181_1 SRR3111181 Preview 5658778
SRR3111182_1 SRR3111182 Preview 4791127
SRR3111183_1 SRR3111183 Preview 6074261
SRR3111184_1 SRR3111184 Preview 6535203
SRR3111185_1 SRR3111185 Preview 4266284
SRR3111186_1 SRR3111186 Preview 5319318
SRR3111187_1 SRR3111187 Preview 2130652
SRR3111188_1 SRR3111188 Preview 5269256

Organism : Mus musculus

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File Size : 427M

Mouse Cell Data

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tSNE image.
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PCA image.
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Gene Body Coverage image.

Data Resources


Organism Run Metadata Link Data Repository Link Pubmed Record Link Author Provided Files DAVID Annotation Chart Link DAVID Annotation Table Link Gene Body Coverage Matrix Link PCA Matrix Link Krona Plot Img Link Unmapped Reads Link Expression Correlation
Mus musculus