SCPortalen


Single cell transcriptomics reveals unanticipated features of early hematopoietic precursors.


Molecular changes underlying stem cell differentiation are of fundamental interest. scRNA-seq on murine hematopoietic stem cells (HSC) and their progeny MPP1 separated the cells into 3 main clusters with distinct features: active, quiescent, and an un-characterized cluster. Induction of anemia resulted in mobilization of the quiescent to the active cluster and of the early to later stage of cell cycle, with marked increase in expression of certain transcription factors (TFs) while maintaining expression of interferon response genes. Cells with surface markers of long term HSC increased the expression of a group of TFs expressed highly in normal cycling MPP1 cells. However, at least Id1 and Hes1 were significantly activated in both HSC and MPP1 cells in anemic mice. Lineage-specific genes were differently expressed between cells, and correlated with the cell cycle stages with a specific augmentation of erythroid related genes in the G2/M phase. Most lineage specific TFs were stochastically expressed in the early precursor cells, but a few, such as Klf1, were detected only at very low levels in few precursor cells. The activation of these factors may correlate with stages of differentiation. This study reveals effects of cell cycle progression on the expression of lineage specific genes in precursor cells, and suggests that hematopoietic stress changes the balance of renewal and differentiation in these homeostatic cells.

GSE68981 Samples



Cell Metadata and BAM Files

Bulk Download

BAM Files Run Accession Number Sample Accession Number Organism Organ/Tissue Dev. Stage Cell Type Sequencer Protocol Assay Type Library Layout Ontology Term Cell Cycle Phase

FASTQC Report



FASTQC File ID Cell Accession Number FASTQC Report Link No. Sequence Tags
SRR2031390_1 SRR2031390 Preview 1283200
SRR2031390_2 SRR2031390 Preview 1283200
SRR2031391_1 SRR2031391 Preview 1107615
SRR2031391_2 SRR2031391 Preview 1107615
SRR2031393_1 SRR2031393 Preview 2823492
SRR2031393_2 SRR2031393 Preview 2823492
SRR2031396_1 SRR2031396 Preview 1480952
SRR2031396_2 SRR2031396 Preview 1480952
SRR2031398_1 SRR2031398 Preview 1066905
SRR2031398_2 SRR2031398 Preview 1066905
SRR2031399_1 SRR2031399 Preview 17783
SRR2031399_2 SRR2031399 Preview 17783
SRR2031400_1 SRR2031400 Preview 1583357
SRR2031400_2 SRR2031400 Preview 1583357
SRR2031401_1 SRR2031401 Preview 541415
SRR2031401_2 SRR2031401 Preview 541415
SRR2031402_1 SRR2031402 Preview 1208258
SRR2031402_2 SRR2031402 Preview 1208258
SRR2031403_1 SRR2031403 Preview 1034482
SRR2031403_2 SRR2031403 Preview 1034482
SRR2031404_1 SRR2031404 Preview 908614
SRR2031404_2 SRR2031404 Preview 908614
SRR2031405_1 SRR2031405 Preview 1377263
SRR2031405_2 SRR2031405 Preview 1377263
SRR2031406_1 SRR2031406 Preview 1090079
SRR2031406_2 SRR2031406 Preview 1090079
SRR2031408_1 SRR2031408 Preview 1466930
SRR2031408_2 SRR2031408 Preview 1466930
SRR2031411_1 SRR2031411 Preview 947791
SRR2031411_2 SRR2031411 Preview 947791
SRR2031413_1 SRR2031413 Preview 7474
SRR2031413_2 SRR2031413 Preview 7474
SRR2031415_1 SRR2031415 Preview 1649006
SRR2031415_2 SRR2031415 Preview 1649006
SRR2031420_1 SRR2031420 Preview 1618121
SRR2031420_2 SRR2031420 Preview 1618121
SRR2031421_1 SRR2031421 Preview 750478
SRR2031421_2 SRR2031421 Preview 750478
SRR2031423_1 SRR2031423 Preview 24113
SRR2031423_2 SRR2031423 Preview 24113
SRR2031425_1 SRR2031425 Preview 825119
SRR2031425_2 SRR2031425 Preview 825119
SRR2031427_1 SRR2031427 Preview 1187286
SRR2031427_2 SRR2031427 Preview 1187286
SRR2031428_1 SRR2031428 Preview 759163
SRR2031428_2 SRR2031428 Preview 759163
SRR2031429_1 SRR2031429 Preview 718320
SRR2031429_2 SRR2031429 Preview 718320
SRR2031430_1 SRR2031430 Preview 631574
SRR2031430_2 SRR2031430 Preview 631574
SRR2031431_1 SRR2031431 Preview 903936
SRR2031431_2 SRR2031431 Preview 903936
SRR2031432_1 SRR2031432 Preview 1008057
SRR2031432_2 SRR2031432 Preview 1008057
SRR2031433_1 SRR2031433 Preview 1644084
SRR2031433_2 SRR2031433 Preview 1644084
SRR2031434_1 SRR2031434 Preview 1202275
SRR2031434_2 SRR2031434 Preview 1202275
SRR2031435_1 SRR2031435 Preview 924823
SRR2031435_2 SRR2031435 Preview 924823
SRR2031436_1 SRR2031436 Preview 36633
SRR2031436_2 SRR2031436 Preview 36633
SRR2031437_1 SRR2031437 Preview 490338
SRR2031437_2 SRR2031437 Preview 490338
SRR2031443_1 SRR2031443 Preview 1176307
SRR2031443_2 SRR2031443 Preview 1176307
SRR2031444_1 SRR2031444 Preview 1036840
SRR2031444_2 SRR2031444 Preview 1036840
SRR2031445_1 SRR2031445 Preview 1784566
SRR2031445_2 SRR2031445 Preview 1784566
SRR2031450_1 SRR2031450 Preview 705439
SRR2031450_2 SRR2031450 Preview 705439
SRR2031451_1 SRR2031451 Preview 1522068
SRR2031451_2 SRR2031451 Preview 1522068
SRR2031452_1 SRR2031452 Preview 1398152
SRR2031452_2 SRR2031452 Preview 1398152
SRR2031453_1 SRR2031453 Preview 683951
SRR2031453_2 SRR2031453 Preview 683951
SRR2031454_1 SRR2031454 Preview 945250
SRR2031454_2 SRR2031454 Preview 945250
SRR2031456_1 SRR2031456 Preview 973699
SRR2031456_2 SRR2031456 Preview 973699
SRR2031457_1 SRR2031457 Preview 2658805
SRR2031457_2 SRR2031457 Preview 2658805
SRR2031459_1 SRR2031459 Preview 1185555
SRR2031459_2 SRR2031459 Preview 1185555
SRR2031462_1 SRR2031462 Preview 766475
SRR2031462_2 SRR2031462 Preview 766475
SRR2031463_1 SRR2031463 Preview 28982
SRR2031463_2 SRR2031463 Preview 28982
SRR2031464_1 SRR2031464 Preview 1261352
SRR2031464_2 SRR2031464 Preview 1261352
SRR2031465_1 SRR2031465 Preview 737811
SRR2031465_2 SRR2031465 Preview 737811
SRR2031468_1 SRR2031468 Preview 289095
SRR2031468_2 SRR2031468 Preview 289095
SRR2031471_1 SRR2031471 Preview 577029
SRR2031471_2 SRR2031471 Preview 577029
SRR2031472_1 SRR2031472 Preview 490381
SRR2031472_2 SRR2031472 Preview 490381
SRR2031473_1 SRR2031473 Preview 680872
SRR2031473_2 SRR2031473 Preview 680872
SRR2031475_1 SRR2031475 Preview 1729744
SRR2031475_2 SRR2031475 Preview 1729744
SRR2031476_1 SRR2031476 Preview 147179
SRR2031476_2 SRR2031476 Preview 147179
SRR2031477_1 SRR2031477 Preview 1128368
SRR2031477_2 SRR2031477 Preview 1128368
SRR2031478_1 SRR2031478 Preview 1170877
SRR2031478_2 SRR2031478 Preview 1170877
SRR2031481_1 SRR2031481 Preview 1381723
SRR2031481_2 SRR2031481 Preview 1381723
SRR2031482_1 SRR2031482 Preview 1364854
SRR2031482_2 SRR2031482 Preview 1364854
SRR2031483_1 SRR2031483 Preview 1004303
SRR2031483_2 SRR2031483 Preview 1004303
SRR2031484_1 SRR2031484 Preview 1151268
SRR2031484_2 SRR2031484 Preview 1151268
SRR2031486_1 SRR2031486 Preview 966452
SRR2031486_2 SRR2031486 Preview 966452
SRR2031487_1 SRR2031487 Preview 1239419
SRR2031487_2 SRR2031487 Preview 1239419
SRR2031489_1 SRR2031489 Preview 4291298
SRR2031489_2 SRR2031489 Preview 4291298
SRR2031492_1 SRR2031492 Preview 2481982
SRR2031492_2 SRR2031492 Preview 2481982
SRR2031494_1 SRR2031494 Preview 1609812
SRR2031494_2 SRR2031494 Preview 1609812
SRR2031495_1 SRR2031495 Preview 66786
SRR2031495_2 SRR2031495 Preview 66786
SRR2031496_1 SRR2031496 Preview 1423016
SRR2031496_2 SRR2031496 Preview 1423016
SRR2031497_1 SRR2031497 Preview 1154948
SRR2031497_2 SRR2031497 Preview 1154948
SRR2031498_1 SRR2031498 Preview 1311518
SRR2031498_2 SRR2031498 Preview 1311518
SRR2031499_1 SRR2031499 Preview 1515374
SRR2031499_2 SRR2031499 Preview 1515374
SRR2031500_1 SRR2031500 Preview 1482599
SRR2031500_2 SRR2031500 Preview 1482599
SRR2031501_1 SRR2031501 Preview 1049575
SRR2031501_2 SRR2031501 Preview 1049575
SRR2031502_1 SRR2031502 Preview 936864
SRR2031502_2 SRR2031502 Preview 936864
SRR2031504_1 SRR2031504 Preview 1132669
SRR2031504_2 SRR2031504 Preview 1132669
SRR2031507_1 SRR2031507 Preview 1792678
SRR2031507_2 SRR2031507 Preview 1792678
SRR2031509_1 SRR2031509 Preview 40550
SRR2031509_2 SRR2031509 Preview 40550
SRR2031511_1 SRR2031511 Preview 1346551
SRR2031511_2 SRR2031511 Preview 1346551
SRR2031516_1 SRR2031516 Preview 2097705
SRR2031516_2 SRR2031516 Preview 2097705
SRR2031517_1 SRR2031517 Preview 1471854
SRR2031517_2 SRR2031517 Preview 1471854
SRR2031519_1 SRR2031519 Preview 89790
SRR2031519_2 SRR2031519 Preview 89790
SRR2031521_1 SRR2031521 Preview 1837945
SRR2031521_2 SRR2031521 Preview 1837945
SRR2031523_1 SRR2031523 Preview 1874366
SRR2031523_2 SRR2031523 Preview 1874366
SRR2031524_1 SRR2031524 Preview 1979599
SRR2031524_2 SRR2031524 Preview 1979599
SRR2031525_1 SRR2031525 Preview 1286353
SRR2031525_2 SRR2031525 Preview 1286353
SRR2031526_1 SRR2031526 Preview 884992
SRR2031526_2 SRR2031526 Preview 884992
SRR2031527_1 SRR2031527 Preview 1690931
SRR2031527_2 SRR2031527 Preview 1690931
SRR2031528_1 SRR2031528 Preview 1257176
SRR2031528_2 SRR2031528 Preview 1257176
SRR2031529_1 SRR2031529 Preview 2007810
SRR2031529_2 SRR2031529 Preview 2007810
SRR2031530_1 SRR2031530 Preview 1575569
SRR2031530_2 SRR2031530 Preview 1575569
SRR2031531_1 SRR2031531 Preview 1481101
SRR2031531_2 SRR2031531 Preview 1481101
SRR2031532_1 SRR2031532 Preview 170028
SRR2031532_2 SRR2031532 Preview 170028
SRR2031533_1 SRR2031533 Preview 678932
SRR2031533_2 SRR2031533 Preview 678932
SRR2031539_1 SRR2031539 Preview 1789703
SRR2031539_2 SRR2031539 Preview 1789703
SRR2031540_1 SRR2031540 Preview 1352511
SRR2031540_2 SRR2031540 Preview 1352511
SRR2031541_1 SRR2031541 Preview 969905
SRR2031541_2 SRR2031541 Preview 969905
SRR2031546_1 SRR2031546 Preview 1573281
SRR2031546_2 SRR2031546 Preview 1573281
SRR2031547_1 SRR2031547 Preview 1931530
SRR2031547_2 SRR2031547 Preview 1931530
SRR2031548_1 SRR2031548 Preview 1966257
SRR2031548_2 SRR2031548 Preview 1966257
SRR2031549_1 SRR2031549 Preview 1618546
SRR2031549_2 SRR2031549 Preview 1618546
SRR2031550_1 SRR2031550 Preview 2073296
SRR2031550_2 SRR2031550 Preview 2073296
SRR2031552_1 SRR2031552 Preview 1265805
SRR2031552_2 SRR2031552 Preview 1265805
SRR2031553_1 SRR2031553 Preview 4241394
SRR2031553_2 SRR2031553 Preview 4241394
SRR2031555_1 SRR2031555 Preview 3443659
SRR2031555_2 SRR2031555 Preview 3443659
SRR2031558_1 SRR2031558 Preview 2179139
SRR2031558_2 SRR2031558 Preview 2179139
SRR2031559_1 SRR2031559 Preview 151658
SRR2031559_2 SRR2031559 Preview 151658
SRR2031560_1 SRR2031560 Preview 2199937
SRR2031560_2 SRR2031560 Preview 2199937
SRR2031561_1 SRR2031561 Preview 2337004
SRR2031561_2 SRR2031561 Preview 2337004
SRR2031564_1 SRR2031564 Preview 1130321
SRR2031564_2 SRR2031564 Preview 1130321
SRR2031567_1 SRR2031567 Preview 1253111
SRR2031567_2 SRR2031567 Preview 1253111
SRR2031568_1 SRR2031568 Preview 665886
SRR2031568_2 SRR2031568 Preview 665886
SRR2031569_1 SRR2031569 Preview 1214891
SRR2031569_2 SRR2031569 Preview 1214891
SRR2031571_1 SRR2031571 Preview 2268966
SRR2031571_2 SRR2031571 Preview 2268966
SRR2031572_1 SRR2031572 Preview 331843
SRR2031572_2 SRR2031572 Preview 331843
SRR2031573_1 SRR2031573 Preview 1259993
SRR2031573_2 SRR2031573 Preview 1259993
SRR2031574_1 SRR2031574 Preview 1907237
SRR2031574_2 SRR2031574 Preview 1907237
SRR2031577_1 SRR2031577 Preview 2376690
SRR2031577_2 SRR2031577 Preview 2376690
SRR2031578_1 SRR2031578 Preview 1979416
SRR2031578_2 SRR2031578 Preview 1979416
SRR2031579_1 SRR2031579 Preview 2091879
SRR2031579_2 SRR2031579 Preview 2091879
SRR2031580_1 SRR2031580 Preview 1986681
SRR2031580_2 SRR2031580 Preview 1986681
SRR2031581_1 SRR2031581 Preview 3022377
SRR2031581_2 SRR2031581 Preview 3022377
SRR2031582_1 SRR2031582 Preview 2591179
SRR2031582_2 SRR2031582 Preview 2591179
SRR2031584_1 SRR2031584 Preview 1466475
SRR2031584_2 SRR2031584 Preview 1466475
SRR2031585_1 SRR2031585 Preview 2584176
SRR2031585_2 SRR2031585 Preview 2584176
SRR2031586_1 SRR2031586 Preview 1454337
SRR2031586_2 SRR2031586 Preview 1454337
SRR2031588_1 SRR2031588 Preview 306823
SRR2031588_2 SRR2031588 Preview 306823
SRR2031589_1 SRR2031589 Preview 1242640
SRR2031589_2 SRR2031589 Preview 1242640
SRR2031590_1 SRR2031590 Preview 292755
SRR2031590_2 SRR2031590 Preview 292755
SRR2031591_1 SRR2031591 Preview 984206
SRR2031591_2 SRR2031591 Preview 984206
SRR2031592_1 SRR2031592 Preview 1390029
SRR2031592_2 SRR2031592 Preview 1390029
SRR2031593_1 SRR2031593 Preview 1537667
SRR2031593_2 SRR2031593 Preview 1537667
SRR2031594_1 SRR2031594 Preview 1095086
SRR2031594_2 SRR2031594 Preview 1095086
SRR2031596_1 SRR2031596 Preview 114962
SRR2031596_2 SRR2031596 Preview 114962
SRR2031597_1 SRR2031597 Preview 1953800
SRR2031597_2 SRR2031597 Preview 1953800
SRR2031599_1 SRR2031599 Preview 1209587
SRR2031599_2 SRR2031599 Preview 1209587
SRR2031600_1 SRR2031600 Preview 797059
SRR2031600_2 SRR2031600 Preview 797059
SRR2031601_1 SRR2031601 Preview 1856205
SRR2031601_2 SRR2031601 Preview 1856205
SRR2031602_1 SRR2031602 Preview 1054553
SRR2031602_2 SRR2031602 Preview 1054553
SRR2031603_1 SRR2031603 Preview 1884525
SRR2031603_2 SRR2031603 Preview 1884525
SRR2031604_1 SRR2031604 Preview 2114167
SRR2031604_2 SRR2031604 Preview 2114167
SRR2031605_1 SRR2031605 Preview 1052412
SRR2031605_2 SRR2031605 Preview 1052412
SRR2031606_1 SRR2031606 Preview 96981
SRR2031606_2 SRR2031606 Preview 96981
SRR2031607_1 SRR2031607 Preview 1067003
SRR2031607_2 SRR2031607 Preview 1067003
SRR2031608_1 SRR2031608 Preview 1194489
SRR2031608_2 SRR2031608 Preview 1194489
SRR2031609_1 SRR2031609 Preview 2032077
SRR2031609_2 SRR2031609 Preview 2032077
SRR2031610_1 SRR2031610 Preview 669590
SRR2031610_2 SRR2031610 Preview 669590
SRR2031611_1 SRR2031611 Preview 1817304
SRR2031611_2 SRR2031611 Preview 1817304
SRR2031612_1 SRR2031612 Preview 1577376
SRR2031612_2 SRR2031612 Preview 1577376
SRR2031613_1 SRR2031613 Preview 1905353
SRR2031613_2 SRR2031613 Preview 1905353
SRR2031614_1 SRR2031614 Preview 1467123
SRR2031614_2 SRR2031614 Preview 1467123
SRR2031615_1 SRR2031615 Preview 942958
SRR2031615_2 SRR2031615 Preview 942958
SRR2031616_1 SRR2031616 Preview 1921648
SRR2031616_2 SRR2031616 Preview 1921648
SRR2031617_1 SRR2031617 Preview 1630147
SRR2031617_2 SRR2031617 Preview 1630147
SRR2031618_1 SRR2031618 Preview 785786
SRR2031618_2 SRR2031618 Preview 785786
SRR2031619_1 SRR2031619 Preview 137663
SRR2031619_2 SRR2031619 Preview 137663
SRR2031621_1 SRR2031621 Preview 1167791
SRR2031621_2 SRR2031621 Preview 1167791
SRR2031622_1 SRR2031622 Preview 1692958
SRR2031622_2 SRR2031622 Preview 1692958
SRR2031623_1 SRR2031623 Preview 1241521
SRR2031623_2 SRR2031623 Preview 1241521
SRR2031624_1 SRR2031624 Preview 1447342
SRR2031624_2 SRR2031624 Preview 1447342
SRR2031625_1 SRR2031625 Preview 3149701
SRR2031625_2 SRR2031625 Preview 3149701
SRR2031626_1 SRR2031626 Preview 1069142
SRR2031626_2 SRR2031626 Preview 1069142
SRR2031627_1 SRR2031627 Preview 176466
SRR2031627_2 SRR2031627 Preview 176466
SRR2031629_1 SRR2031629 Preview 1184000
SRR2031629_2 SRR2031629 Preview 1184000
SRR2031630_1 SRR2031630 Preview 9718
SRR2031630_2 SRR2031630 Preview 9718
SRR2031631_1 SRR2031631 Preview 13327
SRR2031631_2 SRR2031631 Preview 13327
SRR2031632_1 SRR2031632 Preview 856544
SRR2031632_2 SRR2031632 Preview 856544
SRR2031633_1 SRR2031633 Preview 2916394
SRR2031633_2 SRR2031633 Preview 2916394
SRR2031634_1 SRR2031634 Preview 3967
SRR2031634_2 SRR2031634 Preview 3967
SRR2031635_1 SRR2031635 Preview 473341
SRR2031635_2 SRR2031635 Preview 473341
SRR2031636_1 SRR2031636 Preview 2738401
SRR2031636_2 SRR2031636 Preview 2738401
SRR2031638_1 SRR2031638 Preview 1858680
SRR2031638_2 SRR2031638 Preview 1858680
SRR2031640_1 SRR2031640 Preview 1541764
SRR2031640_2 SRR2031640 Preview 1541764
SRR2031641_1 SRR2031641 Preview 962248
SRR2031641_2 SRR2031641 Preview 962248
SRR2031642_1 SRR2031642 Preview 1072700
SRR2031642_2 SRR2031642 Preview 1072700
SRR2031643_1 SRR2031643 Preview 1792887
SRR2031643_2 SRR2031643 Preview 1792887
SRR2031644_1 SRR2031644 Preview 2442858
SRR2031644_2 SRR2031644 Preview 2442858
SRR2031645_1 SRR2031645 Preview 2377132
SRR2031645_2 SRR2031645 Preview 2377132
SRR2031648_1 SRR2031648 Preview 1545527
SRR2031648_2 SRR2031648 Preview 1545527
SRR2031649_1 SRR2031649 Preview 2227161
SRR2031649_2 SRR2031649 Preview 2227161
SRR2031650_1 SRR2031650 Preview 604622
SRR2031650_2 SRR2031650 Preview 604622
SRR2031651_1 SRR2031651 Preview 795750
SRR2031651_2 SRR2031651 Preview 795750
SRR2031652_1 SRR2031652 Preview 2738911
SRR2031652_2 SRR2031652 Preview 2738911
SRR2031653_1 SRR2031653 Preview 2412742
SRR2031653_2 SRR2031653 Preview 2412742
SRR2031654_1 SRR2031654 Preview 1993848
SRR2031654_2 SRR2031654 Preview 1993848
SRR2031655_1 SRR2031655 Preview 2156737
SRR2031655_2 SRR2031655 Preview 2156737
SRR2031657_1 SRR2031657 Preview 1994394
SRR2031657_2 SRR2031657 Preview 1994394
SRR2031658_1 SRR2031658 Preview 1422693
SRR2031658_2 SRR2031658 Preview 1422693
SRR2031660_1 SRR2031660 Preview 1920141
SRR2031660_2 SRR2031660 Preview 1920141
SRR2031661_1 SRR2031661 Preview 2693173
SRR2031661_2 SRR2031661 Preview 2693173
SRR2031662_1 SRR2031662 Preview 2267482
SRR2031662_2 SRR2031662 Preview 2267482
SRR2031663_1 SRR2031663 Preview 1372011
SRR2031663_2 SRR2031663 Preview 1372011
SRR2031665_1 SRR2031665 Preview 2191328
SRR2031665_2 SRR2031665 Preview 2191328
SRR2031666_1 SRR2031666 Preview 847655
SRR2031666_2 SRR2031666 Preview 847655
SRR2031667_1 SRR2031667 Preview 2416476
SRR2031667_2 SRR2031667 Preview 2416476
SRR2031669_1 SRR2031669 Preview 1399512
SRR2031669_2 SRR2031669 Preview 1399512
SRR2031670_1 SRR2031670 Preview 719449
SRR2031670_2 SRR2031670 Preview 719449
SRR2031671_1 SRR2031671 Preview 1327961
SRR2031671_2 SRR2031671 Preview 1327961
SRR2031672_1 SRR2031672 Preview 1009903
SRR2031672_2 SRR2031672 Preview 1009903
SRR2031673_1 SRR2031673 Preview 1811097
SRR2031673_2 SRR2031673 Preview 1811097
SRR2031674_1 SRR2031674 Preview 619185
SRR2031674_2 SRR2031674 Preview 619185
SRR2031675_1 SRR2031675 Preview 1565140
SRR2031675_2 SRR2031675 Preview 1565140
SRR2031676_1 SRR2031676 Preview 1606037
SRR2031676_2 SRR2031676 Preview 1606037
SRR2031679_1 SRR2031679 Preview 646906
SRR2031679_2 SRR2031679 Preview 646906
SRR2031681_1 SRR2031681 Preview 1018143
SRR2031681_2 SRR2031681 Preview 1018143
SRR2031682_1 SRR2031682 Preview 849176
SRR2031682_2 SRR2031682 Preview 849176
SRR2031683_1 SRR2031683 Preview 1709067
SRR2031683_2 SRR2031683 Preview 1709067
SRR2031684_1 SRR2031684 Preview 98423
SRR2031684_2 SRR2031684 Preview 98423
SRR2031685_1 SRR2031685 Preview 992998
SRR2031685_2 SRR2031685 Preview 992998
SRR2031690_1 SRR2031690 Preview 4368703
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SRR2568701_2 SRR2568701 Preview 2636655
SRR2568702_1 SRR2568702 Preview 2369932
SRR2568702_2 SRR2568702 Preview 2369932
SRR2568704_1 SRR2568704 Preview 2665815
SRR2568704_2 SRR2568704 Preview 2665815
SRR2568705_1 SRR2568705 Preview 815634
SRR2568705_2 SRR2568705 Preview 815634
SRR2568707_1 SRR2568707 Preview 53855
SRR2568707_2 SRR2568707 Preview 53855
SRR2568709_1 SRR2568709 Preview 2244229
SRR2568709_2 SRR2568709 Preview 2244229
SRR2568710_1 SRR2568710 Preview 3494588
SRR2568710_2 SRR2568710 Preview 3494588
SRR2568711_1 SRR2568711 Preview 3015120
SRR2568711_2 SRR2568711 Preview 3015120
SRR2568712_1 SRR2568712 Preview 2332284
SRR2568712_2 SRR2568712 Preview 2332284
SRR2568714_1 SRR2568714 Preview 3171353
SRR2568714_2 SRR2568714 Preview 3171353
SRR2568715_1 SRR2568715 Preview 1091770
SRR2568715_2 SRR2568715 Preview 1091770
SRR2568716_1 SRR2568716 Preview 3791636
SRR2568716_2 SRR2568716 Preview 3791636
SRR2568717_1 SRR2568717 Preview 1097950
SRR2568717_2 SRR2568717 Preview 1097950
SRR2568718_1 SRR2568718 Preview 3113584
SRR2568718_2 SRR2568718 Preview 3113584
SRR2568720_1 SRR2568720 Preview 137185
SRR2568720_2 SRR2568720 Preview 137185
SRR2568721_1 SRR2568721 Preview 2332408
SRR2568721_2 SRR2568721 Preview 2332408
SRR3224472_1 SRR3224472 Preview 817114
SRR3224472_2 SRR3224472 Preview 817114
SRR3224473_1 SRR3224473 Preview 824348
SRR3224473_2 SRR3224473 Preview 824348
SRR3224474_1 SRR3224474 Preview 829382
SRR3224474_2 SRR3224474 Preview 829382
SRR3224475_1 SRR3224475 Preview 346417
SRR3224475_2 SRR3224475 Preview 346417
SRR3224476_1 SRR3224476 Preview 953035
SRR3224476_2 SRR3224476 Preview 953035
SRR3224477_1 SRR3224477 Preview 924727
SRR3224477_2 SRR3224477 Preview 924727
SRR3224478_1 SRR3224478 Preview 135184
SRR3224478_2 SRR3224478 Preview 135184
SRR3224479_1 SRR3224479 Preview 1033856
SRR3224479_2 SRR3224479 Preview 1033856
SRR3224480_1 SRR3224480 Preview 1118808
SRR3224480_2 SRR3224480 Preview 1118808
SRR3224481_1 SRR3224481 Preview 1059117
SRR3224481_2 SRR3224481 Preview 1059117
SRR3224482_1 SRR3224482 Preview 793870
SRR3224482_2 SRR3224482 Preview 793870
SRR3224483_1 SRR3224483 Preview 1024899
SRR3224483_2 SRR3224483 Preview 1024899
SRR3224484_1 SRR3224484 Preview 621170
SRR3224484_2 SRR3224484 Preview 621170
SRR3224485_1 SRR3224485 Preview 845143
SRR3224485_2 SRR3224485 Preview 845143
SRR3224486_1 SRR3224486 Preview 705362
SRR3224486_2 SRR3224486 Preview 705362
SRR3224488_1 SRR3224488 Preview 961889
SRR3224488_2 SRR3224488 Preview 961889
SRR3224489_1 SRR3224489 Preview 27267
SRR3224489_2 SRR3224489 Preview 27267
SRR3224490_1 SRR3224490 Preview 844047
SRR3224490_2 SRR3224490 Preview 844047
SRR3224494_1 SRR3224494 Preview 240347
SRR3224494_2 SRR3224494 Preview 240347
SRR3224495_1 SRR3224495 Preview 743470
SRR3224495_2 SRR3224495 Preview 743470
SRR3224496_1 SRR3224496 Preview 1201283
SRR3224496_2 SRR3224496 Preview 1201283
SRR3224497_1 SRR3224497 Preview 1225393
SRR3224497_2 SRR3224497 Preview 1225393
SRR3224498_1 SRR3224498 Preview 891035
SRR3224498_2 SRR3224498 Preview 891035
SRR3224499_1 SRR3224499 Preview 12309
SRR3224499_2 SRR3224499 Preview 12309
SRR3224500_1 SRR3224500 Preview 1128272
SRR3224500_2 SRR3224500 Preview 1128272
SRR3224501_1 SRR3224501 Preview 977707
SRR3224501_2 SRR3224501 Preview 977707
SRR3224502_1 SRR3224502 Preview 340224
SRR3224502_2 SRR3224502 Preview 340224
SRR3224503_1 SRR3224503 Preview 603210
SRR3224503_2 SRR3224503 Preview 603210
SRR3224504_1 SRR3224504 Preview 882216
SRR3224504_2 SRR3224504 Preview 882216
SRR3224507_1 SRR3224507 Preview 1373889
SRR3224507_2 SRR3224507 Preview 1373889
SRR3224508_1 SRR3224508 Preview 963650
SRR3224508_2 SRR3224508 Preview 963650
SRR3224510_1 SRR3224510 Preview 712444
SRR3224510_2 SRR3224510 Preview 712444
SRR3224513_1 SRR3224513 Preview 128706
SRR3224513_2 SRR3224513 Preview 128706
SRR3224514_1 SRR3224514 Preview 908013
SRR3224514_2 SRR3224514 Preview 908013
SRR3224515_1 SRR3224515 Preview 458894
SRR3224515_2 SRR3224515 Preview 458894
SRR3224516_1 SRR3224516 Preview 849229
SRR3224516_2 SRR3224516 Preview 849229
SRR3224517_1 SRR3224517 Preview 1197434
SRR3224517_2 SRR3224517 Preview 1197434
SRR3224519_1 SRR3224519 Preview 1090754
SRR3224519_2 SRR3224519 Preview 1090754
SRR3224520_1 SRR3224520 Preview 1094292
SRR3224520_2 SRR3224520 Preview 1094292
SRR3224521_1 SRR3224521 Preview 868803
SRR3224521_2 SRR3224521 Preview 868803
SRR3224523_1 SRR3224523 Preview 362194
SRR3224523_2 SRR3224523 Preview 362194
SRR3224526_1 SRR3224526 Preview 1412753
SRR3224526_2 SRR3224526 Preview 1412753
SRR3224527_1 SRR3224527 Preview 1338253
SRR3224527_2 SRR3224527 Preview 1338253
SRR3224528_1 SRR3224528 Preview 1043550
SRR3224528_2 SRR3224528 Preview 1043550
SRR3224530_1 SRR3224530 Preview 738765
SRR3224530_2 SRR3224530 Preview 738765
SRR3224531_1 SRR3224531 Preview 869710
SRR3224531_2 SRR3224531 Preview 869710
SRR3224533_1 SRR3224533 Preview 894882
SRR3224533_2 SRR3224533 Preview 894882
SRR3224534_1 SRR3224534 Preview 920483
SRR3224534_2 SRR3224534 Preview 920483
SRR3224535_1 SRR3224535 Preview 703
SRR3224535_2 SRR3224535 Preview 703
SRR3224536_1 SRR3224536 Preview 1337646
SRR3224536_2 SRR3224536 Preview 1337646
SRR3224537_1 SRR3224537 Preview 729821
SRR3224537_2 SRR3224537 Preview 729821
SRR3224538_1 SRR3224538 Preview 889795
SRR3224538_2 SRR3224538 Preview 889795
SRR3224539_1 SRR3224539 Preview 587101
SRR3224539_2 SRR3224539 Preview 587101
SRR3224540_1 SRR3224540 Preview 1044839
SRR3224540_2 SRR3224540 Preview 1044839
SRR3224541_1 SRR3224541 Preview 1038597
SRR3224541_2 SRR3224541 Preview 1038597
SRR3224542_1 SRR3224542 Preview 227741
SRR3224542_2 SRR3224542 Preview 227741
SRR3224543_1 SRR3224543 Preview 256637
SRR3224543_2 SRR3224543 Preview 256637
SRR3224544_1 SRR3224544 Preview 882236
SRR3224544_2 SRR3224544 Preview 882236
SRR3224545_1 SRR3224545 Preview 446068
SRR3224545_2 SRR3224545 Preview 446068
SRR3224546_1 SRR3224546 Preview 161094
SRR3224546_2 SRR3224546 Preview 161094
SRR3224547_1 SRR3224547 Preview 556130
SRR3224547_2 SRR3224547 Preview 556130
SRR3224548_1 SRR3224548 Preview 764230
SRR3224548_2 SRR3224548 Preview 764230
SRR3224549_1 SRR3224549 Preview 794438
SRR3224549_2 SRR3224549 Preview 794438
SRR3224550_1 SRR3224550 Preview 270576
SRR3224550_2 SRR3224550 Preview 270576
SRR3224551_1 SRR3224551 Preview 57904
SRR3224551_2 SRR3224551 Preview 57904
SRR3224552_1 SRR3224552 Preview 734830
SRR3224552_2 SRR3224552 Preview 734830
SRR3224553_1 SRR3224553 Preview 1062104
SRR3224553_2 SRR3224553 Preview 1062104
SRR3224554_1 SRR3224554 Preview 1071976
SRR3224554_2 SRR3224554 Preview 1071976
SRR3224555_1 SRR3224555 Preview 874015
SRR3224555_2 SRR3224555 Preview 874015
SRR3224556_1 SRR3224556 Preview 1029075
SRR3224556_2 SRR3224556 Preview 1029075
SRR3224557_1 SRR3224557 Preview 998234
SRR3224557_2 SRR3224557 Preview 998234
SRR3224558_1 SRR3224558 Preview 829871
SRR3224558_2 SRR3224558 Preview 829871
SRR3224559_1 SRR3224559 Preview 696041
SRR3224559_2 SRR3224559 Preview 696041
SRR3224560_1 SRR3224560 Preview 1225414
SRR3224560_2 SRR3224560 Preview 1225414
SRR3224561_1 SRR3224561 Preview 1001717
SRR3224561_2 SRR3224561 Preview 1001717
SRR3224562_1 SRR3224562 Preview 972031
SRR3224562_2 SRR3224562 Preview 972031
SRR3224563_1 SRR3224563 Preview 987148
SRR3224563_2 SRR3224563 Preview 987148
SRR3224564_1 SRR3224564 Preview 1184749
SRR3224564_2 SRR3224564 Preview 1184749
SRR3224566_1 SRR3224566 Preview 896063
SRR3224566_2 SRR3224566 Preview 896063
SRR3224567_1 SRR3224567 Preview 1006297
SRR3224567_2 SRR3224567 Preview 1006297

Organism : Mus musculus

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File Size : 1.1G

Mouse Cell Data

Image Currently Unavailable
tSNE image.
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PCA image.
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Gene Body Coverage image.

Data Resources


Organism Run Metadata Link Data Repository Link Pubmed Record Link Author Provided Files DAVID Annotation Chart Link DAVID Annotation Table Link Gene Body Coverage Matrix Link PCA Matrix Link Krona Plot Img Link Unmapped Reads Link Expression Correlation
Mus musculus