SCPortalen


Dissecting direct reprogramming from fibroblast to neuron using single-cell RNA-seq.


Direct lineage reprogramming represents a remarkable conversion of cellular and transcriptome states. However, the intermediate stages through which individual cells progress during reprogramming are largely undefined. Here we use single-cell RNA sequencing at multiple time points to dissect direct reprogramming from mouse embryonic fibroblasts to induced neuronal cells. By deconstructing heterogeneity at each time point and ordering cells by transcriptome similarity, we find that the molecular reprogramming path is remarkably continuous. Overexpression of the proneural pioneer factor Ascl1 results in a well-defined initialization, causing cells to exit the cell cycle and re-focus gene expression through distinct neural transcription factors. The initial transcriptional response is relatively homogeneous among fibroblasts, suggesting that the early steps are not limiting for productive reprogramming. Instead, the later emergence of a competing myogenic program and variable transgene dynamics over time appear to be the major efficiency limits of direct reprogramming. Moreover, a transcriptional state, distinct from donor and target cell programs, is transiently induced in cells undergoing productive reprogramming. Our data provide a high-resolution approach for understanding transcriptome states during lineage differentiation.

GSE67310 Samples



Cell Metadata and BAM Files

Bulk Download

BAM Files Run Accession Number Sample Accession Number Organism Organ/Tissue Dev. Stage Cell Type Sequencer Protocol Assay Type Library Layout Ontology Term Cell Cycle Phase

FASTQC Report



FASTQC File ID Cell Accession Number FASTQC Report Link No. Sequence Tags
SRR1930899_1 SRR1930899 Preview 2495758
SRR1930899_2 SRR1930899 Preview 2495758
SRR1930900_1 SRR1930900 Preview 1729152
SRR1930900_2 SRR1930900 Preview 1729152
SRR1930901_1 SRR1930901 Preview 2597546
SRR1930901_2 SRR1930901 Preview 2597546
SRR1930902_1 SRR1930902 Preview 2066046
SRR1930902_2 SRR1930902 Preview 2066046
SRR1930903_1 SRR1930903 Preview 1224886
SRR1930903_2 SRR1930903 Preview 1224886
SRR1930904_1 SRR1930904 Preview 1967937
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SRR1930905_1 SRR1930905 Preview 1422163
SRR1930905_2 SRR1930905 Preview 1422163
SRR1930906_1 SRR1930906 Preview 2769601
SRR1930906_2 SRR1930906 Preview 2769601
SRR1930907_1 SRR1930907 Preview 1634011
SRR1930907_2 SRR1930907 Preview 1634011
SRR1930908_1 SRR1930908 Preview 873322
SRR1930908_2 SRR1930908 Preview 873322
SRR1930909_1 SRR1930909 Preview 2458485
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SRR1930910_1 SRR1930910 Preview 3049396
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SRR1930911_1 SRR1930911 Preview 2038739
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SRR1930934_1 SRR1930934 Preview 1989106
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SRR1930935_1 SRR1930935 Preview 1584168
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SRR1930957_1 SRR1930957 Preview 4307460
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SRR1930958_1 SRR1930958 Preview 3995987
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SRR1930960_1 SRR1930960 Preview 615086
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SRR1930961_1 SRR1930961 Preview 4537669
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SRR1930962_1 SRR1930962 Preview 3703705
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SRR1930963_1 SRR1930963 Preview 3339504
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SRR1930964_1 SRR1930964 Preview 3956962
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SRR1930965_1 SRR1930965 Preview 2520898
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SRR1930966_1 SRR1930966 Preview 2440374
SRR1930966_2 SRR1930966 Preview 2440374
SRR1930967_1 SRR1930967 Preview 2224644
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SRR1930968_1 SRR1930968 Preview 3194020
SRR1930968_2 SRR1930968 Preview 3194020
SRR1930969_1 SRR1930969 Preview 3226593
SRR1930969_2 SRR1930969 Preview 3226593
SRR1930970_1 SRR1930970 Preview 2933873
SRR1930970_2 SRR1930970 Preview 2933873
SRR1930971_1 SRR1930971 Preview 2764209
SRR1930971_2 SRR1930971 Preview 2764209
SRR1930972_1 SRR1930972 Preview 163900
SRR1930972_2 SRR1930972 Preview 163900
SRR1930973_1 SRR1930973 Preview 1794755
SRR1930973_2 SRR1930973 Preview 1794755
SRR1930974_1 SRR1930974 Preview 2122842
SRR1930974_2 SRR1930974 Preview 2122842
SRR1930975_1 SRR1930975 Preview 2050142
SRR1930975_2 SRR1930975 Preview 2050142
SRR1930976_1 SRR1930976 Preview 1983087
SRR1930976_2 SRR1930976 Preview 1983087
SRR1930977_1 SRR1930977 Preview 5927017
SRR1930977_2 SRR1930977 Preview 5927017
SRR1930978_1 SRR1930978 Preview 1558636
SRR1930978_2 SRR1930978 Preview 1558636
SRR1930979_1 SRR1930979 Preview 2758838
SRR1930979_2 SRR1930979 Preview 2758838
SRR1930980_1 SRR1930980 Preview 1314136
SRR1930980_2 SRR1930980 Preview 1314136
SRR1930981_1 SRR1930981 Preview 1993512
SRR1930981_2 SRR1930981 Preview 1993512
SRR1930982_1 SRR1930982 Preview 4979064
SRR1930982_2 SRR1930982 Preview 4979064
SRR1930983_1 SRR1930983 Preview 3006865
SRR1930983_2 SRR1930983 Preview 3006865
SRR1930984_1 SRR1930984 Preview 660373
SRR1930984_2 SRR1930984 Preview 660373
SRR1930985_1 SRR1930985 Preview 2619934
SRR1930985_2 SRR1930985 Preview 2619934
SRR1930986_1 SRR1930986 Preview 1704579
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SRR1930987_1 SRR1930987 Preview 2941745
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SRR1930988_1 SRR1930988 Preview 1935267
SRR1930988_2 SRR1930988 Preview 1935267
SRR1930989_1 SRR1930989 Preview 1977878
SRR1930989_2 SRR1930989 Preview 1977878
SRR1930990_1 SRR1930990 Preview 2121022
SRR1930990_2 SRR1930990 Preview 2121022
SRR1930991_1 SRR1930991 Preview 1394827
SRR1930991_2 SRR1930991 Preview 1394827
SRR1930992_1 SRR1930992 Preview 3200677
SRR1930992_2 SRR1930992 Preview 3200677
SRR1930993_1 SRR1930993 Preview 2291791
SRR1930993_2 SRR1930993 Preview 2291791
SRR1930994_1 SRR1930994 Preview 2315736
SRR1930994_2 SRR1930994 Preview 2315736
SRR1930995_1 SRR1930995 Preview 3604755
SRR1930995_2 SRR1930995 Preview 3604755
SRR1930996_1 SRR1930996 Preview 2265193
SRR1930996_2 SRR1930996 Preview 2265193
SRR1930997_1 SRR1930997 Preview 1668996
SRR1930997_2 SRR1930997 Preview 1668996
SRR1930998_1 SRR1930998 Preview 2806006
SRR1930998_2 SRR1930998 Preview 2806006
SRR1930999_1 SRR1930999 Preview 3059213
SRR1930999_2 SRR1930999 Preview 3059213
SRR1931000_1 SRR1931000 Preview 3287954
SRR1931000_2 SRR1931000 Preview 3287954
SRR1931001_1 SRR1931001 Preview 2498987
SRR1931001_2 SRR1931001 Preview 2498987
SRR1931002_1 SRR1931002 Preview 2295448
SRR1931002_2 SRR1931002 Preview 2295448
SRR1931003_1 SRR1931003 Preview 5417988
SRR1931003_2 SRR1931003 Preview 5417988
SRR1931004_1 SRR1931004 Preview 3819873
SRR1931004_2 SRR1931004 Preview 3819873
SRR1931005_1 SRR1931005 Preview 2587763
SRR1931005_2 SRR1931005 Preview 2587763
SRR1931006_1 SRR1931006 Preview 2348283
SRR1931006_2 SRR1931006 Preview 2348283
SRR1931007_1 SRR1931007 Preview 1907119
SRR1931007_2 SRR1931007 Preview 1907119
SRR1931008_1 SRR1931008 Preview 2920141
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SRR1931009_1 SRR1931009 Preview 5168034
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SRR1931010_1 SRR1931010 Preview 2962778
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SRR1931011_1 SRR1931011 Preview 2765987
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SRR1931012_1 SRR1931012 Preview 2680188
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SRR1931015_1 SRR1931015 Preview 1393517
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SRR1931022_1 SRR1931022 Preview 2663192
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SRR1931110_1 SRR1931110 Preview 2000146
SRR1931110_2 SRR1931110 Preview 2000146
SRR1931111_1 SRR1931111 Preview 2481429
SRR1931111_2 SRR1931111 Preview 2481429
SRR1931112_1 SRR1931112 Preview 2474553
SRR1931112_2 SRR1931112 Preview 2474553
SRR1931113_1 SRR1931113 Preview 2790026
SRR1931113_2 SRR1931113 Preview 2790026
SRR1931114_1 SRR1931114 Preview 2349998
SRR1931114_2 SRR1931114 Preview 2349998
SRR1931115_1 SRR1931115 Preview 2255620
SRR1931115_2 SRR1931115 Preview 2255620
SRR1931116_1 SRR1931116 Preview 2811194
SRR1931116_2 SRR1931116 Preview 2811194
SRR1931117_1 SRR1931117 Preview 2435794
SRR1931117_2 SRR1931117 Preview 2435794
SRR1931118_1 SRR1931118 Preview 2388290
SRR1931118_2 SRR1931118 Preview 2388290
SRR1931119_1 SRR1931119 Preview 2046384
SRR1931119_2 SRR1931119 Preview 2046384
SRR1931120_1 SRR1931120 Preview 2019843
SRR1931120_2 SRR1931120 Preview 2019843
SRR1931122_1 SRR1931122 Preview 2399401
SRR1931122_2 SRR1931122 Preview 2399401
SRR1931123_1 SRR1931123 Preview 2733869
SRR1931123_2 SRR1931123 Preview 2733869
SRR1931124_1 SRR1931124 Preview 2691570
SRR1931124_2 SRR1931124 Preview 2691570
SRR1931125_1 SRR1931125 Preview 2843819
SRR1931125_2 SRR1931125 Preview 2843819
SRR1931126_1 SRR1931126 Preview 2410938
SRR1931126_2 SRR1931126 Preview 2410938
SRR1931127_1 SRR1931127 Preview 2933029
SRR1931127_2 SRR1931127 Preview 2933029
SRR1931128_1 SRR1931128 Preview 2796412
SRR1931128_2 SRR1931128 Preview 2796412
SRR1931129_1 SRR1931129 Preview 2427938
SRR1931129_2 SRR1931129 Preview 2427938
SRR1931130_1 SRR1931130 Preview 2584330
SRR1931130_2 SRR1931130 Preview 2584330
SRR1931131_1 SRR1931131 Preview 2236953
SRR1931131_2 SRR1931131 Preview 2236953
SRR1931132_1 SRR1931132 Preview 2610212
SRR1931132_2 SRR1931132 Preview 2610212
SRR1931134_1 SRR1931134 Preview 1874654
SRR1931134_2 SRR1931134 Preview 1874654
SRR1931135_1 SRR1931135 Preview 2638576
SRR1931135_2 SRR1931135 Preview 2638576
SRR1931136_1 SRR1931136 Preview 2380459
SRR1931136_2 SRR1931136 Preview 2380459
SRR1931137_1 SRR1931137 Preview 2670369
SRR1931137_2 SRR1931137 Preview 2670369
SRR1931138_1 SRR1931138 Preview 2511074
SRR1931138_2 SRR1931138 Preview 2511074
SRR1931139_1 SRR1931139 Preview 1561567
SRR1931139_2 SRR1931139 Preview 1561567
SRR1931140_1 SRR1931140 Preview 1805327
SRR1931140_2 SRR1931140 Preview 1805327
SRR1931141_1 SRR1931141 Preview 2645184
SRR1931141_2 SRR1931141 Preview 2645184
SRR1931142_1 SRR1931142 Preview 2586255
SRR1931142_2 SRR1931142 Preview 2586255
SRR1931143_1 SRR1931143 Preview 2981568
SRR1931143_2 SRR1931143 Preview 2981568
SRR1931144_1 SRR1931144 Preview 3118364
SRR1931144_2 SRR1931144 Preview 3118364
SRR1931145_1 SRR1931145 Preview 2933358
SRR1931145_2 SRR1931145 Preview 2933358
SRR1931146_1 SRR1931146 Preview 2830023
SRR1931146_2 SRR1931146 Preview 2830023
SRR1931147_1 SRR1931147 Preview 2401524
SRR1931147_2 SRR1931147 Preview 2401524
SRR1931148_1 SRR1931148 Preview 1778490
SRR1931148_2 SRR1931148 Preview 1778490
SRR1931149_1 SRR1931149 Preview 2220095
SRR1931149_2 SRR1931149 Preview 2220095
SRR1931150_1 SRR1931150 Preview 2310432
SRR1931150_2 SRR1931150 Preview 2310432
SRR1931151_1 SRR1931151 Preview 2548517
SRR1931151_2 SRR1931151 Preview 2548517
SRR1931153_1 SRR1931153 Preview 1873414
SRR1931153_2 SRR1931153 Preview 1873414
SRR3137817_1 SRR3137817 Preview 3878075
SRR3137817_2 SRR3137817 Preview 3878075
SRR3137820_1 SRR3137820 Preview 5542842
SRR3137820_2 SRR3137820 Preview 5542842
SRR3137821_1 SRR3137821 Preview 5048771
SRR3137821_2 SRR3137821 Preview 5048771
SRR3137822_1 SRR3137822 Preview 3929455
SRR3137822_2 SRR3137822 Preview 3929455
SRR3137823_1 SRR3137823 Preview 3612300
SRR3137823_2 SRR3137823 Preview 3612300
SRR3137824_1 SRR3137824 Preview 4288806
SRR3137824_2 SRR3137824 Preview 4288806
SRR3137825_1 SRR3137825 Preview 4354765
SRR3137825_2 SRR3137825 Preview 4354765
SRR3137827_1 SRR3137827 Preview 4776782
SRR3137827_2 SRR3137827 Preview 4776782
SRR3137828_1 SRR3137828 Preview 5810362
SRR3137828_2 SRR3137828 Preview 5810362
SRR3137829_1 SRR3137829 Preview 4502845
SRR3137829_2 SRR3137829 Preview 4502845
SRR3137830_1 SRR3137830 Preview 4165350
SRR3137830_2 SRR3137830 Preview 4165350
SRR3137832_1 SRR3137832 Preview 5229636
SRR3137832_2 SRR3137832 Preview 5229636
SRR3137833_1 SRR3137833 Preview 4277035
SRR3137833_2 SRR3137833 Preview 4277035
SRR3137834_1 SRR3137834 Preview 4272095
SRR3137834_2 SRR3137834 Preview 4272095
SRR3137837_1 SRR3137837 Preview 4114209
SRR3137837_2 SRR3137837 Preview 4114209
SRR3137838_1 SRR3137838 Preview 4651395
SRR3137838_2 SRR3137838 Preview 4651395
SRR3137839_1 SRR3137839 Preview 1452355
SRR3137839_2 SRR3137839 Preview 1452355
SRR3137840_1 SRR3137840 Preview 2998623
SRR3137840_2 SRR3137840 Preview 2998623
SRR3137841_1 SRR3137841 Preview 5026739
SRR3137841_2 SRR3137841 Preview 5026739
SRR3137842_1 SRR3137842 Preview 2477469
SRR3137842_2 SRR3137842 Preview 2477469
SRR3137843_1 SRR3137843 Preview 5196681
SRR3137843_2 SRR3137843 Preview 5196681
SRR3137844_1 SRR3137844 Preview 4986689
SRR3137844_2 SRR3137844 Preview 4986689
SRR3137845_1 SRR3137845 Preview 5099888
SRR3137845_2 SRR3137845 Preview 5099888
SRR3137847_1 SRR3137847 Preview 4422953
SRR3137847_2 SRR3137847 Preview 4422953
SRR3137849_1 SRR3137849 Preview 3910116
SRR3137849_2 SRR3137849 Preview 3910116
SRR3137850_1 SRR3137850 Preview 3826940
SRR3137850_2 SRR3137850 Preview 3826940
SRR3137853_1 SRR3137853 Preview 6574381
SRR3137853_2 SRR3137853 Preview 6574381
SRR3137855_1 SRR3137855 Preview 4847009
SRR3137855_2 SRR3137855 Preview 4847009
SRR3137856_1 SRR3137856 Preview 4121836
SRR3137856_2 SRR3137856 Preview 4121836
SRR3137858_1 SRR3137858 Preview 3591028
SRR3137858_2 SRR3137858 Preview 3591028
SRR3137859_1 SRR3137859 Preview 3997835
SRR3137859_2 SRR3137859 Preview 3997835
SRR3137861_1 SRR3137861 Preview 4620461
SRR3137861_2 SRR3137861 Preview 4620461
SRR3137862_1 SRR3137862 Preview 3321076
SRR3137862_2 SRR3137862 Preview 3321076
SRR3137863_1 SRR3137863 Preview 631958
SRR3137863_2 SRR3137863 Preview 631958
SRR3137864_1 SRR3137864 Preview 2860024
SRR3137864_2 SRR3137864 Preview 2860024
SRR3137865_1 SRR3137865 Preview 3739398
SRR3137865_2 SRR3137865 Preview 3739398
SRR3137866_1 SRR3137866 Preview 4264963
SRR3137866_2 SRR3137866 Preview 4264963
SRR3137867_1 SRR3137867 Preview 3555595
SRR3137867_2 SRR3137867 Preview 3555595
SRR3137868_1 SRR3137868 Preview 3975576
SRR3137868_2 SRR3137868 Preview 3975576
SRR3137869_1 SRR3137869 Preview 4647342
SRR3137869_2 SRR3137869 Preview 4647342
SRR3137870_1 SRR3137870 Preview 1781059
SRR3137870_2 SRR3137870 Preview 1781059
SRR3137871_1 SRR3137871 Preview 4163909
SRR3137871_2 SRR3137871 Preview 4163909
SRR3137872_1 SRR3137872 Preview 5244686
SRR3137872_2 SRR3137872 Preview 5244686
SRR3137873_1 SRR3137873 Preview 4866921
SRR3137873_2 SRR3137873 Preview 4866921
SRR3137874_1 SRR3137874 Preview 3766407
SRR3137874_2 SRR3137874 Preview 3766407
SRR3137875_1 SRR3137875 Preview 2228431
SRR3137875_2 SRR3137875 Preview 2228431
SRR3137876_1 SRR3137876 Preview 4374205
SRR3137876_2 SRR3137876 Preview 4374205
SRR3137877_1 SRR3137877 Preview 3552305
SRR3137877_2 SRR3137877 Preview 3552305
SRR3137878_1 SRR3137878 Preview 4225285
SRR3137878_2 SRR3137878 Preview 4225285
SRR3137879_1 SRR3137879 Preview 3738341
SRR3137879_2 SRR3137879 Preview 3738341
SRR3137880_1 SRR3137880 Preview 2606145
SRR3137880_2 SRR3137880 Preview 2606145
SRR3137881_1 SRR3137881 Preview 2826735
SRR3137881_2 SRR3137881 Preview 2826735
SRR3137882_1 SRR3137882 Preview 5812199
SRR3137882_2 SRR3137882 Preview 5812199
SRR3137883_1 SRR3137883 Preview 3895864
SRR3137883_2 SRR3137883 Preview 3895864
SRR3137884_1 SRR3137884 Preview 1303555
SRR3137884_2 SRR3137884 Preview 1303555
SRR3137885_1 SRR3137885 Preview 4551226
SRR3137885_2 SRR3137885 Preview 4551226
SRR3137886_1 SRR3137886 Preview 3688804
SRR3137886_2 SRR3137886 Preview 3688804
SRR3137887_1 SRR3137887 Preview 4844023
SRR3137887_2 SRR3137887 Preview 4844023
SRR3137888_1 SRR3137888 Preview 5065098
SRR3137888_2 SRR3137888 Preview 5065098
SRR3137889_1 SRR3137889 Preview 4130472
SRR3137889_2 SRR3137889 Preview 4130472
SRR3137890_1 SRR3137890 Preview 3637290
SRR3137890_2 SRR3137890 Preview 3637290
SRR3137891_1 SRR3137891 Preview 5448850
SRR3137891_2 SRR3137891 Preview 5448850
SRR3137892_1 SRR3137892 Preview 3221666
SRR3137892_2 SRR3137892 Preview 3221666
SRR3137893_1 SRR3137893 Preview 5113536
SRR3137893_2 SRR3137893 Preview 5113536
SRR3137894_1 SRR3137894 Preview 4445716
SRR3137894_2 SRR3137894 Preview 4445716
SRR3137896_1 SRR3137896 Preview 3433911
SRR3137896_2 SRR3137896 Preview 3433911
SRR3137897_1 SRR3137897 Preview 4644257
SRR3137897_2 SRR3137897 Preview 4644257
SRR3137898_1 SRR3137898 Preview 3666931
SRR3137898_2 SRR3137898 Preview 3666931
SRR3137899_1 SRR3137899 Preview 5088108
SRR3137899_2 SRR3137899 Preview 5088108
SRR3137900_1 SRR3137900 Preview 5494529
SRR3137900_2 SRR3137900 Preview 5494529
SRR3137901_1 SRR3137901 Preview 4389388
SRR3137901_2 SRR3137901 Preview 4389388
SRR3137902_1 SRR3137902 Preview 3609527
SRR3137902_2 SRR3137902 Preview 3609527
SRR3137903_1 SRR3137903 Preview 4765557
SRR3137903_2 SRR3137903 Preview 4765557
SRR3137906_1 SRR3137906 Preview 5758663
SRR3137906_2 SRR3137906 Preview 5758663
SRR3137907_1 SRR3137907 Preview 5490220
SRR3137907_2 SRR3137907 Preview 5490220
SRR3137908_1 SRR3137908 Preview 4346105
SRR3137908_2 SRR3137908 Preview 4346105
SRR3137909_1 SRR3137909 Preview 4306905
SRR3137909_2 SRR3137909 Preview 4306905
SRR3137910_1 SRR3137910 Preview 4763024
SRR3137910_2 SRR3137910 Preview 4763024
SRR3137911_1 SRR3137911 Preview 5811181
SRR3137911_2 SRR3137911 Preview 5811181
SRR3137912_1 SRR3137912 Preview 5633070
SRR3137912_2 SRR3137912 Preview 5633070
SRR3137915_1 SRR3137915 Preview 2860251
SRR3137915_2 SRR3137915 Preview 2860251
SRR3137917_1 SRR3137917 Preview 5776880
SRR3137917_2 SRR3137917 Preview 5776880
SRR3137918_1 SRR3137918 Preview 5292909
SRR3137918_2 SRR3137918 Preview 5292909
SRR3137919_1 SRR3137919 Preview 6703100
SRR3137919_2 SRR3137919 Preview 6703100
SRR3137920_1 SRR3137920 Preview 5672985
SRR3137920_2 SRR3137920 Preview 5672985
SRR3137921_1 SRR3137921 Preview 6718136
SRR3137921_2 SRR3137921 Preview 6718136
SRR3137922_1 SRR3137922 Preview 3250358
SRR3137922_2 SRR3137922 Preview 3250358
SRR3137923_1 SRR3137923 Preview 5321133
SRR3137923_2 SRR3137923 Preview 5321133
SRR3137924_1 SRR3137924 Preview 4800780
SRR3137924_2 SRR3137924 Preview 4800780
SRR3137926_1 SRR3137926 Preview 5948014
SRR3137926_2 SRR3137926 Preview 5948014
SRR3137932_1 SRR3137932 Preview 4206580
SRR3137932_2 SRR3137932 Preview 4206580
SRR3137933_1 SRR3137933 Preview 5828897
SRR3137933_2 SRR3137933 Preview 5828897
SRR3137934_1 SRR3137934 Preview 5843610
SRR3137934_2 SRR3137934 Preview 5843610
SRR3137935_1 SRR3137935 Preview 6258859
SRR3137935_2 SRR3137935 Preview 6258859
SRR3137936_1 SRR3137936 Preview 4147636
SRR3137936_2 SRR3137936 Preview 4147636
SRR3137937_1 SRR3137937 Preview 4304539
SRR3137937_2 SRR3137937 Preview 4304539
SRR3137938_1 SRR3137938 Preview 7074631
SRR3137938_2 SRR3137938 Preview 7074631
SRR3137939_1 SRR3137939 Preview 4199140
SRR3137939_2 SRR3137939 Preview 4199140
SRR3137942_1 SRR3137942 Preview 5509112
SRR3137942_2 SRR3137942 Preview 5509112
SRR3137943_1 SRR3137943 Preview 5297247
SRR3137943_2 SRR3137943 Preview 5297247
SRR3137944_1 SRR3137944 Preview 5585667
SRR3137944_2 SRR3137944 Preview 5585667
SRR3137945_1 SRR3137945 Preview 6288741
SRR3137945_2 SRR3137945 Preview 6288741
SRR3137947_1 SRR3137947 Preview 1464207
SRR3137947_2 SRR3137947 Preview 1464207
SRR3137950_1 SRR3137950 Preview 2558161
SRR3137950_2 SRR3137950 Preview 2558161
SRR3137951_1 SRR3137951 Preview 5701602
SRR3137951_2 SRR3137951 Preview 5701602
SRR3137952_1 SRR3137952 Preview 5546673
SRR3137952_2 SRR3137952 Preview 5546673
SRR3137953_1 SRR3137953 Preview 4660147
SRR3137953_2 SRR3137953 Preview 4660147
SRR3137954_1 SRR3137954 Preview 2990894
SRR3137954_2 SRR3137954 Preview 2990894
SRR3137955_1 SRR3137955 Preview 2911012
SRR3137955_2 SRR3137955 Preview 2911012
SRR3137956_1 SRR3137956 Preview 2841754
SRR3137956_2 SRR3137956 Preview 2841754
SRR3137957_1 SRR3137957 Preview 2729046
SRR3137957_2 SRR3137957 Preview 2729046
SRR3137958_1 SRR3137958 Preview 3533548
SRR3137958_2 SRR3137958 Preview 3533548
SRR3137959_1 SRR3137959 Preview 3500915
SRR3137959_2 SRR3137959 Preview 3500915
SRR3137960_1 SRR3137960 Preview 3264461
SRR3137960_2 SRR3137960 Preview 3264461
SRR3137961_1 SRR3137961 Preview 3684837
SRR3137961_2 SRR3137961 Preview 3684837
SRR3137962_1 SRR3137962 Preview 4493214
SRR3137962_2 SRR3137962 Preview 4493214
SRR3137963_1 SRR3137963 Preview 4507233
SRR3137963_2 SRR3137963 Preview 4507233
SRR3137964_1 SRR3137964 Preview 3853182
SRR3137964_2 SRR3137964 Preview 3853182
SRR3137965_1 SRR3137965 Preview 4737916
SRR3137965_2 SRR3137965 Preview 4737916
SRR3137966_1 SRR3137966 Preview 4966156
SRR3137966_2 SRR3137966 Preview 4966156
SRR3137967_1 SRR3137967 Preview 4043914
SRR3137967_2 SRR3137967 Preview 4043914
SRR3137968_1 SRR3137968 Preview 4184746
SRR3137968_2 SRR3137968 Preview 4184746
SRR3137969_1 SRR3137969 Preview 4445222
SRR3137969_2 SRR3137969 Preview 4445222
SRR3137970_1 SRR3137970 Preview 2619905
SRR3137970_2 SRR3137970 Preview 2619905
SRR3137971_1 SRR3137971 Preview 4266448
SRR3137971_2 SRR3137971 Preview 4266448
SRR3137972_1 SRR3137972 Preview 3876132
SRR3137972_2 SRR3137972 Preview 3876132
SRR3137973_1 SRR3137973 Preview 3793125
SRR3137973_2 SRR3137973 Preview 3793125
SRR3137974_1 SRR3137974 Preview 4888534
SRR3137974_2 SRR3137974 Preview 4888534
SRR3137975_1 SRR3137975 Preview 3611165
SRR3137975_2 SRR3137975 Preview 3611165
SRR3137976_1 SRR3137976 Preview 4661434
SRR3137976_2 SRR3137976 Preview 4661434
SRR3137977_1 SRR3137977 Preview 4266665
SRR3137977_2 SRR3137977 Preview 4266665
SRR3137978_1 SRR3137978 Preview 2989000
SRR3137978_2 SRR3137978 Preview 2989000
SRR3137979_1 SRR3137979 Preview 2712599
SRR3137979_2 SRR3137979 Preview 2712599
SRR3137980_1 SRR3137980 Preview 2739646
SRR3137980_2 SRR3137980 Preview 2739646
SRR3137981_1 SRR3137981 Preview 2635231
SRR3137981_2 SRR3137981 Preview 2635231
SRR3137982_1 SRR3137982 Preview 4612423
SRR3137982_2 SRR3137982 Preview 4612423
SRR3137983_1 SRR3137983 Preview 4562369
SRR3137983_2 SRR3137983 Preview 4562369
SRR3137984_1 SRR3137984 Preview 4748095
SRR3137984_2 SRR3137984 Preview 4748095
SRR3137985_1 SRR3137985 Preview 3177856
SRR3137985_2 SRR3137985 Preview 3177856
SRR3137986_1 SRR3137986 Preview 2648600
SRR3137986_2 SRR3137986 Preview 2648600
SRR3137987_1 SRR3137987 Preview 3672114
SRR3137987_2 SRR3137987 Preview 3672114
SRR3137988_1 SRR3137988 Preview 3568820
SRR3137988_2 SRR3137988 Preview 3568820
SRR3137989_1 SRR3137989 Preview 3778210
SRR3137989_2 SRR3137989 Preview 3778210
SRR3137990_1 SRR3137990 Preview 5029209
SRR3137990_2 SRR3137990 Preview 5029209
SRR3137991_1 SRR3137991 Preview 4543773
SRR3137991_2 SRR3137991 Preview 4543773
SRR3137992_1 SRR3137992 Preview 5145367
SRR3137992_2 SRR3137992 Preview 5145367
SRR3137993_1 SRR3137993 Preview 4158252
SRR3137993_2 SRR3137993 Preview 4158252
SRR3137994_1 SRR3137994 Preview 4941690
SRR3137994_2 SRR3137994 Preview 4941690
SRR3137995_1 SRR3137995 Preview 3163623
SRR3137995_2 SRR3137995 Preview 3163623
SRR3137996_1 SRR3137996 Preview 3338433
SRR3137996_2 SRR3137996 Preview 3338433
SRR3137997_1 SRR3137997 Preview 3550514
SRR3137997_2 SRR3137997 Preview 3550514
SRR3137998_1 SRR3137998 Preview 3041203
SRR3137998_2 SRR3137998 Preview 3041203
SRR3137999_1 SRR3137999 Preview 4139292
SRR3137999_2 SRR3137999 Preview 4139292

Organism : Mus musculus

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File Size : 868M

Mouse Cell Data

Image Currently Unavailable
tSNE image.
Image Currently Unavailable
PCA image.
Image Currently Unavailable
Gene Body Coverage image.

Data Resources


Organism Run Metadata Link Data Repository Link Pubmed Record Link Author Provided Files DAVID Annotation Chart Link DAVID Annotation Table Link Gene Body Coverage Matrix Link PCA Matrix Link Krona Plot Img Link Unmapped Reads Link Expression Correlation
Mus musculus