SCPortalen


Quantitative assessment of single-cell RNA-sequencing methods.


Interest in single-cell whole-transcriptome analysis is growing rapidly, especially for profiling rare or heterogeneous populations of cells. We compared commercially available single-cell RNA amplification methods with both microliter and nanoliter volumes, using sequence from bulk total RNA and multiplexed quantitative PCR as benchmarks to systematically evaluate the sensitivity and accuracy of various single-cell RNA-seq approaches. We show that single-cell RNA-seq can be used to perform accurate quantitative transcriptome measurement in individual cells with a relatively small number of sequencing reads and that sequencing large numbers of single cells can recapitulate bulk transcriptome complexity.

GSE51254 Samples



Cell Metadata and BAM Files

Bulk Download

BAM Files Run Accession Number Sample Accession Number Organism Organ/Tissue Dev. Stage Cell Type Sequencer Protocol Assay Type Library Layout Ontology Term Cell Cycle Phase
SRR1003759 SAMN02366450 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003760 SAMN02366456 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003761 SAMN02366453 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003762 SAMN02366458 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003763 SAMN02366457 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003764 SAMN02366459 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003765 SAMN02366461 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003766 SAMN02366462 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003767 SAMN02366467 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003768 SAMN02366460 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003769 SAMN02366466 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003770 SAMN02366468 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003771 SAMN02366474 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] None
SRR1003772 SAMN02366476 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003773 SAMN02366470 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003774 SAMN02366472 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003775 SAMN02366480 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003776 SAMN02366469 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003777 SAMN02366465 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003778 SAMN02366471 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003779 SAMN02366477 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003780 SAMN02366463 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2
SRR1003781 SAMN02366475 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003782 SAMN02366484 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003783 SAMN02366464 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003784 SAMN02366473 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003785 SAMN02366478 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003786 SAMN02366481 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2
SRR1003787 SAMN02366483 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003788 SAMN02366479 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003789 SAMN02366489 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003790 SAMN02366482 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003791 SAMN02366487 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003792 SAMN02366490 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003793 SAMN02366493 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2
SRR1003794 SAMN02366492 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003795 SAMN02366485 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003796 SAMN02366494 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G1.S
SRR1003797 SAMN02366486 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003798 SAMN02366488 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2
SRR1003799 SAMN02366495 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003800 SAMN02366491 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003801 SAMN02366497 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003802 SAMN02366496 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2
SRR1003803 SAMN02366499 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2
SRR1003804 SAMN02366498 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2
SRR1003805 SAMN02366504 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003806 SAMN02366501 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003807 SAMN02366509 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003808 SAMN02366502 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003809 SAMN02366500 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003810 SAMN02366505 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003811 SAMN02366503 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G1.S
SRR1003812 SAMN02366506 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003813 SAMN02366513 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003814 SAMN02366510 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003815 SAMN02366507 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003816 SAMN02366515 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003817 SAMN02366516 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003818 SAMN02366511 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003819 SAMN02366517 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G1.S
SRR1003820 SAMN02366526 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003821 SAMN02366508 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003822 SAMN02366518 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003823 SAMN02366523 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003824 SAMN02366512 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003825 SAMN02366530 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003826 SAMN02366520 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003827 SAMN02366514 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003828 SAMN02366533 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003829 SAMN02366525 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003830 SAMN02366522 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003831 SAMN02366538 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G1.S
SRR1003832 SAMN02366521 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003833 SAMN02366519 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003834 SAMN02366532 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003835 SAMN02366527 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003836 SAMN02366524 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G1.S
SRR1003837 SAMN02366531 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003838 SAMN02366528 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003839 SAMN02366536 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003840 SAMN02366544 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003841 SAMN02366537 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003842 SAMN02366539 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003843 SAMN02366534 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003844 SAMN02366535 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003845 SAMN02366529 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G1.S
SRR1003846 SAMN02366541 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003847 SAMN02366542 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2
SRR1003848 SAMN02366545 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003849 SAMN02366543 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003850 SAMN02366540 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003851 SAMN02366549 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003852 SAMN02366550 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003853 SAMN02366546 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003854 SAMN02366547 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003855 SAMN02366557 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G1.S
SRR1003856 SAMN02366548 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003857 SAMN02366551 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003858 SAMN02366558 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G1.S
SRR1003859 SAMN02366553 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003860 SAMN02366552 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G2.M
SRR1003861 SAMN02366560 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] G1.S
SRR1003862 SAMN02366555 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003863 SAMN02366554 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003864 SAMN02366561 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003865 SAMN02366559 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] M.G1
SRR1003866 SAMN02366556 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S
SRR1003867 SAMN02366562 Homo sapiens Colon Adult HCT116 Illumina HiSeq 2000 SMARTer RNA-Seq Paired-End EFO:0002824 [HCT116] S

FASTQC Report



FASTQC File ID Cell Accession Number FASTQC Report Link No. Sequence Tags
SRR1003755_1 SRR1003755 Preview 32731608
SRR1003755_2 SRR1003755 Preview 32731608
SRR1003756_1 SRR1003756 Preview 29842636
SRR1003756_2 SRR1003756 Preview 29842636
SRR1003757_1 SRR1003757 Preview 39662302
SRR1003757_2 SRR1003757 Preview 39662302
SRR1003758_1 SRR1003758 Preview 34639257
SRR1003758_2 SRR1003758 Preview 34639257
SRR1003759_1 SRR1003759 Preview 96317182
SRR1003760_1 SRR1003760 Preview 26046663
SRR1003761_1 SRR1003761 Preview 28326201
SRR1003762_1 SRR1003762 Preview 46434776
SRR1003763_1 SRR1003763 Preview 52639349
SRR1003764_1 SRR1003764 Preview 45844818
SRR1003765_1 SRR1003765 Preview 54659828
SRR1003766_1 SRR1003766 Preview 47338271
SRR1003767_1 SRR1003767 Preview 99125829
SRR1003768_1 SRR1003768 Preview 80442448
SRR1003769_1 SRR1003769 Preview 51367166
SRR1003770_1 SRR1003770 Preview 39675173
SRR1003771_1 SRR1003771 Preview 35633199
SRR1003772_1 SRR1003772 Preview 1175921
SRR1003772_2 SRR1003772 Preview 1175921
SRR1003773_1 SRR1003773 Preview 1724373
SRR1003773_2 SRR1003773 Preview 1724373
SRR1003774_1 SRR1003774 Preview 1434993
SRR1003774_2 SRR1003774 Preview 1434993
SRR1003775_1 SRR1003775 Preview 1270031
SRR1003775_2 SRR1003775 Preview 1270031
SRR1003776_1 SRR1003776 Preview 1856552
SRR1003776_2 SRR1003776 Preview 1856552
SRR1003777_1 SRR1003777 Preview 213683
SRR1003777_2 SRR1003777 Preview 213683
SRR1003778_1 SRR1003778 Preview 4799673
SRR1003778_2 SRR1003778 Preview 4799673
SRR1003779_1 SRR1003779 Preview 1455500
SRR1003779_2 SRR1003779 Preview 1455500
SRR1003780_1 SRR1003780 Preview 5754228
SRR1003780_2 SRR1003780 Preview 5754228
SRR1003781_1 SRR1003781 Preview 4206725
SRR1003781_2 SRR1003781 Preview 4206725
SRR1003782_1 SRR1003782 Preview 2583306
SRR1003782_2 SRR1003782 Preview 2583306
SRR1003783_1 SRR1003783 Preview 942785
SRR1003783_2 SRR1003783 Preview 942785
SRR1003784_1 SRR1003784 Preview 2419745
SRR1003784_2 SRR1003784 Preview 2419745
SRR1003785_1 SRR1003785 Preview 2126643
SRR1003785_2 SRR1003785 Preview 2126643
SRR1003786_1 SRR1003786 Preview 1648421
SRR1003786_2 SRR1003786 Preview 1648421
SRR1003787_1 SRR1003787 Preview 3152816
SRR1003787_2 SRR1003787 Preview 3152816
SRR1003788_1 SRR1003788 Preview 4115350
SRR1003788_2 SRR1003788 Preview 4115350
SRR1003789_1 SRR1003789 Preview 2595869
SRR1003789_2 SRR1003789 Preview 2595869
SRR1003790_1 SRR1003790 Preview 372590
SRR1003790_2 SRR1003790 Preview 372590
SRR1003791_1 SRR1003791 Preview 132640
SRR1003791_2 SRR1003791 Preview 132640
SRR1003792_1 SRR1003792 Preview 588185
SRR1003792_2 SRR1003792 Preview 588185
SRR1003793_1 SRR1003793 Preview 389935
SRR1003793_2 SRR1003793 Preview 389935
SRR1003794_1 SRR1003794 Preview 1369652
SRR1003794_2 SRR1003794 Preview 1369652
SRR1003795_1 SRR1003795 Preview 94696
SRR1003795_2 SRR1003795 Preview 94696
SRR1003796_1 SRR1003796 Preview 2847731
SRR1003796_2 SRR1003796 Preview 2847731
SRR1003797_1 SRR1003797 Preview 1247431
SRR1003797_2 SRR1003797 Preview 1247431
SRR1003798_1 SRR1003798 Preview 1924178
SRR1003798_2 SRR1003798 Preview 1924178
SRR1003799_1 SRR1003799 Preview 593843
SRR1003799_2 SRR1003799 Preview 593843
SRR1003800_1 SRR1003800 Preview 2057817
SRR1003800_2 SRR1003800 Preview 2057817
SRR1003801_1 SRR1003801 Preview 2793612
SRR1003801_2 SRR1003801 Preview 2793612
SRR1003802_1 SRR1003802 Preview 2393509
SRR1003802_2 SRR1003802 Preview 2393509
SRR1003803_1 SRR1003803 Preview 1690688
SRR1003803_2 SRR1003803 Preview 1690688
SRR1003804_1 SRR1003804 Preview 1632341
SRR1003804_2 SRR1003804 Preview 1632341
SRR1003805_1 SRR1003805 Preview 411823
SRR1003805_2 SRR1003805 Preview 411823
SRR1003806_1 SRR1003806 Preview 2092538
SRR1003806_2 SRR1003806 Preview 2092538
SRR1003807_1 SRR1003807 Preview 3303790
SRR1003807_2 SRR1003807 Preview 3303790
SRR1003808_1 SRR1003808 Preview 2540877
SRR1003808_2 SRR1003808 Preview 2540877
SRR1003809_1 SRR1003809 Preview 2142569
SRR1003809_2 SRR1003809 Preview 2142569
SRR1003810_1 SRR1003810 Preview 1905798
SRR1003810_2 SRR1003810 Preview 1905798
SRR1003811_1 SRR1003811 Preview 916865
SRR1003811_2 SRR1003811 Preview 916865
SRR1003812_1 SRR1003812 Preview 1821807
SRR1003812_2 SRR1003812 Preview 1821807
SRR1003813_1 SRR1003813 Preview 1249485
SRR1003813_2 SRR1003813 Preview 1249485
SRR1003814_1 SRR1003814 Preview 4540136
SRR1003814_2 SRR1003814 Preview 4540136
SRR1003815_1 SRR1003815 Preview 1382417
SRR1003815_2 SRR1003815 Preview 1382417
SRR1003816_1 SRR1003816 Preview 1982729
SRR1003816_2 SRR1003816 Preview 1982729
SRR1003817_1 SRR1003817 Preview 631558
SRR1003817_2 SRR1003817 Preview 631558
SRR1003818_1 SRR1003818 Preview 1905895
SRR1003818_2 SRR1003818 Preview 1905895
SRR1003819_1 SRR1003819 Preview 5185388
SRR1003819_2 SRR1003819 Preview 5185388
SRR1003820_1 SRR1003820 Preview 1801853
SRR1003820_2 SRR1003820 Preview 1801853
SRR1003821_1 SRR1003821 Preview 1378150
SRR1003821_2 SRR1003821 Preview 1378150
SRR1003822_1 SRR1003822 Preview 818431
SRR1003822_2 SRR1003822 Preview 818431
SRR1003823_1 SRR1003823 Preview 519174
SRR1003823_2 SRR1003823 Preview 519174
SRR1003824_1 SRR1003824 Preview 1897512
SRR1003824_2 SRR1003824 Preview 1897512
SRR1003825_1 SRR1003825 Preview 3429418
SRR1003825_2 SRR1003825 Preview 3429418
SRR1003826_1 SRR1003826 Preview 3514055
SRR1003826_2 SRR1003826 Preview 3514055
SRR1003827_1 SRR1003827 Preview 2641791
SRR1003827_2 SRR1003827 Preview 2641791
SRR1003828_1 SRR1003828 Preview 2158727
SRR1003828_2 SRR1003828 Preview 2158727
SRR1003829_1 SRR1003829 Preview 1435462
SRR1003829_2 SRR1003829 Preview 1435462
SRR1003830_1 SRR1003830 Preview 2887742
SRR1003830_2 SRR1003830 Preview 2887742
SRR1003831_1 SRR1003831 Preview 4447334
SRR1003831_2 SRR1003831 Preview 4447334
SRR1003832_1 SRR1003832 Preview 1728928
SRR1003832_2 SRR1003832 Preview 1728928
SRR1003833_1 SRR1003833 Preview 2725692
SRR1003833_2 SRR1003833 Preview 2725692
SRR1003834_1 SRR1003834 Preview 1392309
SRR1003834_2 SRR1003834 Preview 1392309
SRR1003835_1 SRR1003835 Preview 1295918
SRR1003835_2 SRR1003835 Preview 1295918
SRR1003836_1 SRR1003836 Preview 2954156
SRR1003836_2 SRR1003836 Preview 2954156
SRR1003837_1 SRR1003837 Preview 2998495
SRR1003837_2 SRR1003837 Preview 2998495
SRR1003838_1 SRR1003838 Preview 692429
SRR1003838_2 SRR1003838 Preview 692429
SRR1003839_1 SRR1003839 Preview 485584
SRR1003839_2 SRR1003839 Preview 485584
SRR1003840_1 SRR1003840 Preview 84161
SRR1003840_2 SRR1003840 Preview 84161
SRR1003841_1 SRR1003841 Preview 300600
SRR1003841_2 SRR1003841 Preview 300600
SRR1003842_1 SRR1003842 Preview 450115
SRR1003842_2 SRR1003842 Preview 450115
SRR1003843_1 SRR1003843 Preview 1212204
SRR1003843_2 SRR1003843 Preview 1212204
SRR1003844_1 SRR1003844 Preview 823678
SRR1003844_2 SRR1003844 Preview 823678
SRR1003845_1 SRR1003845 Preview 3096577
SRR1003845_2 SRR1003845 Preview 3096577
SRR1003846_1 SRR1003846 Preview 1628933
SRR1003846_2 SRR1003846 Preview 1628933
SRR1003847_1 SRR1003847 Preview 2288399
SRR1003847_2 SRR1003847 Preview 2288399
SRR1003848_1 SRR1003848 Preview 2126947
SRR1003848_2 SRR1003848 Preview 2126947
SRR1003849_1 SRR1003849 Preview 1124056
SRR1003849_2 SRR1003849 Preview 1124056
SRR1003850_1 SRR1003850 Preview 881206
SRR1003850_2 SRR1003850 Preview 881206
SRR1003851_1 SRR1003851 Preview 2857671
SRR1003851_2 SRR1003851 Preview 2857671
SRR1003852_1 SRR1003852 Preview 3575663
SRR1003852_2 SRR1003852 Preview 3575663
SRR1003853_1 SRR1003853 Preview 2526501
SRR1003853_2 SRR1003853 Preview 2526501
SRR1003854_1 SRR1003854 Preview 2201601
SRR1003854_2 SRR1003854 Preview 2201601
SRR1003855_1 SRR1003855 Preview 1010911
SRR1003855_2 SRR1003855 Preview 1010911
SRR1003856_1 SRR1003856 Preview 1859554
SRR1003856_2 SRR1003856 Preview 1859554
SRR1003857_1 SRR1003857 Preview 1823033
SRR1003857_2 SRR1003857 Preview 1823033
SRR1003858_1 SRR1003858 Preview 2482403
SRR1003858_2 SRR1003858 Preview 2482403
SRR1003859_1 SRR1003859 Preview 1806841
SRR1003859_2 SRR1003859 Preview 1806841
SRR1003860_1 SRR1003860 Preview 2277035
SRR1003860_2 SRR1003860 Preview 2277035
SRR1003861_1 SRR1003861 Preview 1006639
SRR1003861_2 SRR1003861 Preview 1006639
SRR1003862_1 SRR1003862 Preview 874633
SRR1003862_2 SRR1003862 Preview 874633
SRR1003863_1 SRR1003863 Preview 832940
SRR1003863_2 SRR1003863 Preview 832940
SRR1003864_1 SRR1003864 Preview 1767600
SRR1003864_2 SRR1003864 Preview 1767600
SRR1003865_1 SRR1003865 Preview 2613997
SRR1003865_2 SRR1003865 Preview 2613997
SRR1003866_1 SRR1003866 Preview 3893287
SRR1003866_2 SRR1003866 Preview 3893287
SRR1003867_1 SRR1003867 Preview 1724759
SRR1003867_2 SRR1003867 Preview 1724759


Organism : Homo sapiens

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File Size : 293M

Human Cell Data

Image Currently Unavailable
tSNE image.
Image Currently Unavailable
PCA image.
Image Currently Unavailable
Gene Body Coverage image.

Data Resources


Organism Run Metadata Link Data Repository Link Pubmed Record Link Author Provided Files DAVID Annotation Chart Link DAVID Annotation Table Link Gene Body Coverage Matrix Link PCA Matrix Link Krona Plot Img Link Unmapped Reads Link Expression Correlation
Homo sapiens