SCPortalen


T cell fate and clonality inference from single-cell transcriptomes.


We developed TraCeR, a computational method to reconstruct full-length, paired T cell receptor (TCR) sequences from T lymphocyte single-cell RNA sequence data. TraCeR links T cell specificity with functional response by revealing clonal relationships between cells alongside their transcriptional profiles. We found that T cell clonotypes in a mouse Salmonella infection model span early activated CD4+ T cells as well as mature effector and memory cells.

E-MTAB-3857 Samples



Cell Metadata and BAM Files

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BAM Files Run Accession Number Sample Accession Number Organism Organ/Tissue Dev. Stage Cell Type Sequencer Protocol Assay Type Library Layout Ontology Term Cell Cycle Phase
ERR1146416 SAMEA3678442 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146417 SAMEA3678443 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146418 SAMEA3678444 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146419 SAMEA3678445 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146420 SAMEA3678446 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146421 SAMEA3678447 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146422 SAMEA3678448 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146423 SAMEA3678449 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146424 SAMEA3678450 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146425 SAMEA3678451 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146426 SAMEA3678452 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146427 SAMEA3678453 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146428 SAMEA3678454 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146429 SAMEA3678455 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146430 SAMEA3678456 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146431 SAMEA3678457 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146432 SAMEA3678458 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146433 SAMEA3678459 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146434 SAMEA3678460 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146435 SAMEA3678461 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146436 SAMEA3678462 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146437 SAMEA3678463 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146438 SAMEA3678464 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146439 SAMEA3678465 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146440 SAMEA3678466 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146441 SAMEA3678467 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146442 SAMEA3678468 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146443 SAMEA3678469 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146444 SAMEA3678470 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146445 SAMEA3678471 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146446 SAMEA3678472 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146447 SAMEA3678473 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146448 SAMEA3678474 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146449 SAMEA3678475 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146450 SAMEA3678476 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146451 SAMEA3678477 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146452 SAMEA3678478 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146453 SAMEA3678479 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146454 SAMEA3678480 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146455 SAMEA3678481 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146456 SAMEA3678482 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146457 SAMEA3678483 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146458 SAMEA3678484 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146459 SAMEA3678485 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146460 SAMEA3678486 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146461 SAMEA3678487 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146462 SAMEA3678488 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146463 SAMEA3678489 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146464 SAMEA3678490 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146465 SAMEA3678491 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146466 SAMEA3678492 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146467 SAMEA3678493 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146468 SAMEA3678494 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146469 SAMEA3678495 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146470 SAMEA3678496 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146471 SAMEA3678497 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146472 SAMEA3678498 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146473 SAMEA3678499 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146474 SAMEA3678500 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146475 SAMEA3678501 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146476 SAMEA3678502 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146477 SAMEA3678503 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146478 SAMEA3678504 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146479 SAMEA3678505 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146480 SAMEA3678506 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146481 SAMEA3678507 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146482 SAMEA3678508 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146483 SAMEA3678509 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146484 SAMEA3678510 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146485 SAMEA3678511 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146486 SAMEA3678512 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146487 SAMEA3678513 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146488 SAMEA3678514 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146489 SAMEA3678515 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146490 SAMEA3678516 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146491 SAMEA3678517 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146492 SAMEA3678518 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146493 SAMEA3678519 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146494 SAMEA3678520 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146495 SAMEA3678521 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146496 SAMEA3678522 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146497 SAMEA3678523 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146498 SAMEA3678524 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146499 SAMEA3678525 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146500 SAMEA3678526 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146501 SAMEA3678527 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146502 SAMEA3678528 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146503 SAMEA3678529 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146504 SAMEA3678530 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146505 SAMEA3678531 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146506 SAMEA3678532 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146507 SAMEA3678533 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146508 SAMEA3678534 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146509 SAMEA3678535 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146510 SAMEA3678536 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146511 SAMEA3678537 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146512 SAMEA3678538 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146513 SAMEA3678539 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146514 SAMEA3678540 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146515 SAMEA3678541 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146516 SAMEA3678542 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146517 SAMEA3678543 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146518 SAMEA3678544 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146519 SAMEA3678545 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146520 SAMEA3678546 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146521 SAMEA3678547 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146522 SAMEA3678548 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146523 SAMEA3678549 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146524 SAMEA3678550 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146525 SAMEA3678551 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146526 SAMEA3678552 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146527 SAMEA3678553 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146528 SAMEA3678554 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146529 SAMEA3678555 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146530 SAMEA3678556 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146531 SAMEA3678557 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146532 SAMEA3678558 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146533 SAMEA3678559 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146534 SAMEA3678560 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146535 SAMEA3678561 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146536 SAMEA3678562 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146537 SAMEA3678563 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146538 SAMEA3678564 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146539 SAMEA3678565 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146540 SAMEA3678566 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146541 SAMEA3678567 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146542 SAMEA3678568 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146543 SAMEA3678569 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146544 SAMEA3678570 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146545 SAMEA3678571 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146546 SAMEA3678572 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146547 SAMEA3678573 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146548 SAMEA3678574 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146549 SAMEA3678575 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146550 SAMEA3678576 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146551 SAMEA3678577 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146552 SAMEA3678578 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146553 SAMEA3678579 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146554 SAMEA3678580 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146555 SAMEA3678581 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146556 SAMEA3678582 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146557 SAMEA3678583 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146558 SAMEA3678584 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146559 SAMEA3678585 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146560 SAMEA3678586 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146561 SAMEA3678587 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146562 SAMEA3678588 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146563 SAMEA3678589 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146564 SAMEA3678590 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146565 SAMEA3678591 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146566 SAMEA3678592 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146567 SAMEA3678593 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146568 SAMEA3678594 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146569 SAMEA3678595 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146570 SAMEA3678596 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146571 SAMEA3678597 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146572 SAMEA3678598 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146573 SAMEA3678599 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146574 SAMEA3678600 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146575 SAMEA3678601 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146576 SAMEA3678602 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146577 SAMEA3678603 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146578 SAMEA3678604 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146579 SAMEA3678605 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146580 SAMEA3678606 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146581 SAMEA3678607 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146582 SAMEA3678608 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146583 SAMEA3678609 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146584 SAMEA3678610 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146585 SAMEA3678611 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146586 SAMEA3678612 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146587 SAMEA3678613 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146588 SAMEA3678614 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146589 SAMEA3678615 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146590 SAMEA3678616 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146591 SAMEA3678617 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146592 SAMEA3678618 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146593 SAMEA3678619 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146594 SAMEA3678620 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146595 SAMEA3678621 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146596 SAMEA3678622 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146597 SAMEA3678623 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146598 SAMEA3678624 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146599 SAMEA3678625 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146600 SAMEA3678626 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146601 SAMEA3678627 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146602 SAMEA3678628 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146603 SAMEA3678629 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146604 SAMEA3678630 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146605 SAMEA3678631 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146606 SAMEA3678632 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146607 SAMEA3678633 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146608 SAMEA3678634 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146609 SAMEA3678635 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146610 SAMEA3678636 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146611 SAMEA3678637 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146612 SAMEA3678638 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146613 SAMEA3678639 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146614 SAMEA3678640 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146615 SAMEA3678641 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146616 SAMEA3678642 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146617 SAMEA3678643 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146618 SAMEA3678644 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146619 SAMEA3678645 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146620 SAMEA3678646 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146621 SAMEA3678647 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146622 SAMEA3678648 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146623 SAMEA3678649 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146624 SAMEA3678650 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146625 SAMEA3678651 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146626 SAMEA3678652 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146627 SAMEA3678653 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146628 SAMEA3678654 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146629 SAMEA3678655 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146630 SAMEA3678656 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146631 SAMEA3678657 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146632 SAMEA3678658 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146633 SAMEA3678659 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146634 SAMEA3678660 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146635 SAMEA3678661 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146636 SAMEA3678662 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146637 SAMEA3678663 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146638 SAMEA3678664 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146639 SAMEA3678665 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146640 SAMEA3678666 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146641 SAMEA3678667 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146642 SAMEA3678668 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146643 SAMEA3678669 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146644 SAMEA3678670 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146645 SAMEA3678671 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146646 SAMEA3678672 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146647 SAMEA3678673 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146648 SAMEA3678674 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146649 SAMEA3678675 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146650 SAMEA3678676 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146651 SAMEA3678677 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146652 SAMEA3678678 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146653 SAMEA3678679 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146654 SAMEA3678680 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146655 SAMEA3678681 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146656 SAMEA3678682 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146657 SAMEA3678683 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146658 SAMEA3678684 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146659 SAMEA3678685 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146660 SAMEA3678686 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146661 SAMEA3678687 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146662 SAMEA3678688 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146663 SAMEA3678689 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146664 SAMEA3678690 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146665 SAMEA3678691 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146666 SAMEA3678692 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146667 SAMEA3678693 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146668 SAMEA3678694 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146669 SAMEA3678695 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146670 SAMEA3678696 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146671 SAMEA3678697 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146672 SAMEA3678698 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146673 SAMEA3678699 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146674 SAMEA3678700 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2.M
ERR1146675 SAMEA3678701 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146676 SAMEA3678702 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146677 SAMEA3678703 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146678 SAMEA3678704 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G2
ERR1146679 SAMEA3678705 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146680 SAMEA3678706 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146681 SAMEA3678707 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146682 SAMEA3678708 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146683 SAMEA3678709 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146684 SAMEA3678710 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1
ERR1146685 SAMEA3678711 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] S
ERR1146686 SAMEA3678712 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] G1.S
ERR1146687 SAMEA3678713 Mus musculus Spleen Adult CD4-positive alpha-beta T cell HiSeq 2500 SMARTer RNA-Seq Paired-end CL:0000624 [CD4-positive alpha-beta T cell] M.G1

FASTQC Report



FASTQC File ID Cell Accession Number FASTQC Report Link No. Sequence Tags
ERR1146416_1 ERR1146416 Preview 4645350
ERR1146416_2 ERR1146416 Preview 4645350
ERR1146417_1 ERR1146417 Preview 4148838
ERR1146417_2 ERR1146417 Preview 4148838
ERR1146418_1 ERR1146418 Preview 4118766
ERR1146418_2 ERR1146418 Preview 4118766
ERR1146419_1 ERR1146419 Preview 3966131
ERR1146419_2 ERR1146419 Preview 3966131
ERR1146420_1 ERR1146420 Preview 2922712
ERR1146420_2 ERR1146420 Preview 2922712
ERR1146421_1 ERR1146421 Preview 4045227
ERR1146421_2 ERR1146421 Preview 4045227
ERR1146422_1 ERR1146422 Preview 4606533
ERR1146422_2 ERR1146422 Preview 4606533
ERR1146423_1 ERR1146423 Preview 3149878
ERR1146423_2 ERR1146423 Preview 3149878
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ERR1146666_1 ERR1146666 Preview 5572044
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ERR1146671_1 ERR1146671 Preview 5691569
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ERR1146672_1 ERR1146672 Preview 6103222
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ERR1146676_1 ERR1146676 Preview 4000159
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ERR1146680_1 ERR1146680 Preview 5173671
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Organism : Mus musculus

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File Size : 613M

Mouse Cell Data

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tSNE image.
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PCA image.
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Gene Body Coverage image.

Data Resources


Organism Run Metadata Link Data Repository Link Pubmed Record Link Author Provided Files DAVID Annotation Chart Link DAVID Annotation Table Link Gene Body Coverage Matrix Link PCA Matrix Link Krona Plot Img Link Unmapped Reads Link Expression Correlation
Mus musculus