SCPortalen


Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells


Recent technical developments have enabled the transcriptomes of hundreds of cells to be assayed in an unbiased manner, opening up the possibility that new subpopulations of cells can be found. However, the effects of potential confounding factors, such as the cell cycle, on the heterogeneity of gene expression and therefore on the ability to robustly identify subpopulations remain unclear. We present and validate a computational approach that uses latent variable models to account for such hidden factors. We show that our single-cell latent variable model (scLVM) allows the identification of otherwise undetectable subpopulations of cells that correspond to different stages during the differentiation of naive T cells into T helper 2 cells. Our approach can be used not only to identify cellular subpopulations but also to tease apart different sources of gene expression heterogeneity in single-cell transcriptomes.

E-MTAB-2805 Samples



Cell Metadata and BAM Files

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BAM Files Run Accession Number Sample Accession Number Organism Organ/Tissue Dev. Stage Cell Type Sequencer Protocol Assay Type Library Layout Ontology Term Cell Cycle Phase
ERR580012 ERS527258 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580013 ERS527252 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580014 ERS527296 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580015 ERS527521 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580016 ERS527362 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580017 ERS527453 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580018 ERS527468 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580019 ERS527467 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580020 ERS527368 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580021 ERS527270 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580022 ERS527343 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580023 ERS527348 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580024 ERS527442 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580025 ERS527396 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580026 ERS527282 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580027 ERS527437 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580028 ERS527323 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580029 ERS527342 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580030 ERS527336 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580031 ERS527455 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580032 ERS527502 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580033 ERS527370 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580034 ERS527411 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580035 ERS527493 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580036 ERS527494 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580037 ERS527359 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580038 ERS527436 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580039 ERS527273 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580040 ERS527259 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580041 ERS527316 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580042 ERS527367 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580043 ERS527460 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580044 ERS527448 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580045 ERS527272 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580046 ERS527518 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580047 ERS527413 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580048 ERS527454 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580049 ERS527481 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580050 ERS527290 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580051 ERS527278 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580052 ERS527276 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580053 ERS527267 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580054 ERS527237 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580055 ERS527246 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580056 ERS527507 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580057 ERS527486 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580058 ERS527256 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580059 ERS527381 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580060 ERS527515 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580061 ERS527366 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580062 ERS527457 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580063 ERS527335 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580064 ERS527375 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580065 ERS527357 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580066 ERS527333 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580067 ERS527354 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580068 ERS527456 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580069 ERS527417 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580070 ERS527364 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580071 ERS527520 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580072 ERS527427 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580073 ERS527496 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580074 ERS527406 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580075 ERS527425 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580076 ERS527277 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580077 ERS527495 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580078 ERS527506 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580079 ERS527358 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580080 ERS527393 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580081 ERS527369 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580082 ERS527361 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580083 ERS527509 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580084 ERS527340 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580085 ERS527402 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580086 ERS527466 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580087 ERS527431 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580088 ERS527445 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580089 ERS527264 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580090 ERS527309 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580091 ERS527501 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580092 ERS527352 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580093 ERS527443 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580094 ERS527283 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580095 ERS527487 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580096 ERS527318 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580097 ERS527302 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580098 ERS527279 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580099 ERS527380 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580100 ERS527337 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580101 ERS527344 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580102 ERS527472 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580103 ERS527331 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580104 ERS527410 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580105 ERS527319 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580106 ERS527451 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580107 ERS527325 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580108 ERS527300 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580109 ERS527310 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580110 ERS527266 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580111 ERS527471 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580112 ERS527449 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580113 ERS527432 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580114 ERS527389 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580115 ERS527363 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580116 ERS527400 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580117 ERS527405 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580118 ERS527395 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580119 ERS527286 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580120 ERS527315 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580121 ERS527444 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580122 ERS527281 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580123 ERS527503 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580124 ERS527390 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580125 ERS527288 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580126 ERS527418 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580127 ERS527388 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580128 ERS527372 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580129 ERS527321 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580130 ERS527401 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580131 ERS527301 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580132 ERS527265 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580133 ERS527329 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580134 ERS527308 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580135 ERS527404 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580136 ERS527513 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580137 ERS527243 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580138 ERS527332 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580139 ERS527476 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580140 ERS527365 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580141 ERS527326 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580142 ERS527268 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580143 ERS527327 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580144 ERS527305 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580145 ERS527294 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580146 ERS527304 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580147 ERS527461 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580148 ERS527339 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580149 ERS527499 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580150 ERS527423 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580151 ERS527514 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580152 ERS527488 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580153 ERS527371 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580154 ERS527373 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580155 ERS527247 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580156 ERS527314 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580157 ERS527385 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580158 ERS527291 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580159 ERS527510 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580160 ERS527408 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580161 ERS527295 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580162 ERS527447 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580163 ERS527516 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580164 ERS527242 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580165 ERS527464 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580166 ERS527433 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580167 ERS527500 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580168 ERS527382 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580169 ERS527517 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580170 ERS527313 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580171 ERS527485 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580172 ERS527298 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580173 ERS527306 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580174 ERS527292 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580175 ERS527317 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580176 ERS527353 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580177 ERS527399 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580178 ERS527439 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580179 ERS527463 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580180 ERS527440 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580181 ERS527434 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580182 ERS527483 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580183 ERS527322 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580184 ERS527409 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580185 ERS527238 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580186 ERS527262 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580187 ERS527428 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580188 ERS527293 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580189 ERS527356 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580190 ERS527285 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580191 ERS527412 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580192 ERS527245 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580193 ERS527397 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580194 ERS527307 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580195 ERS527491 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580196 ERS527324 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580197 ERS527430 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580198 ERS527378 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580199 ERS527271 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580200 ERS527303 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580201 ERS527347 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580202 ERS527240 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580203 ERS527523 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580204 ERS527470 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580205 ERS527475 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580206 ERS527334 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580207 ERS527474 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580208 ERS527438 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580209 ERS527251 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580210 ERS527519 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580211 ERS527383 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580212 ERS527244 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580213 ERS527421 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580214 ERS527504 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580215 ERS527350 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580216 ERS527394 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580217 ERS527330 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580218 ERS527465 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580219 ERS527498 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580220 ERS527274 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580221 ERS527287 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580222 ERS527338 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580223 ERS527379 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580224 ERS527297 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580225 ERS527398 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580226 ERS527299 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580227 ERS527419 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580228 ERS527429 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580229 ERS527289 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580230 ERS527387 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580231 ERS527441 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580232 ERS527477 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580233 ERS527255 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580234 ERS527254 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580235 ERS527426 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580236 ERS527459 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580237 ERS527250 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580238 ERS527346 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580239 ERS527473 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580240 ERS527450 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580241 ERS527497 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580242 ERS527236 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580243 ERS527263 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580244 ERS527458 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580245 ERS527512 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580246 ERS527328 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580247 ERS527490 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580248 ERS527422 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580249 ERS527253 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580250 ERS527508 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580251 ERS527452 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580252 ERS527257 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580253 ERS527275 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580254 ERS527351 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580255 ERS527403 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580256 ERS527424 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580257 ERS527511 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580258 ERS527435 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580259 ERS527407 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580260 ERS527284 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580261 ERS527249 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580262 ERS527311 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580263 ERS527392 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580264 ERS527239 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580265 ERS527269 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580266 ERS527462 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580267 ERS527360 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580268 ERS527349 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580269 ERS527377 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580270 ERS527415 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580271 ERS527489 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580272 ERS527479 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580273 ERS527480 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580274 ERS527478 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580275 ERS527522 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580276 ERS527416 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580277 ERS527241 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580278 ERS527386 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580279 ERS527312 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580280 ERS527420 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580281 ERS527414 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580282 ERS527492 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580283 ERS527484 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580284 ERS527260 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580285 ERS527374 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580286 ERS527391 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580287 ERS527341 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580288 ERS527376 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580289 ERS527446 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580290 ERS527345 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580291 ERS527355 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580292 ERS527482 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580293 ERS527261 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580294 ERS527280 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580295 ERS527505 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580296 ERS527320 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580297 ERS527469 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580298 ERS527248 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None
ERR580299 ERS527384 Mus musculus Embryo Embryo mESC Illumina HiSeq 2000 Quartz-Seq RNA-Seq Paired-End CL:0002322 [embryonic stem cell] None

FASTQC Report



FASTQC File ID Cell Accession Number FASTQC Report Link No. Sequence Tags
ERR580012_1 ERR580012 Preview 5433136
ERR580012_2 ERR580012 Preview 5433136
ERR580013_1 ERR580013 Preview 6979624
ERR580013_2 ERR580013 Preview 6979624
ERR580014_1 ERR580014 Preview 8408757
ERR580014_2 ERR580014 Preview 8408757
ERR580015_1 ERR580015 Preview 8350898
ERR580015_2 ERR580015 Preview 8350898
ERR580016_1 ERR580016 Preview 6515293
ERR580016_2 ERR580016 Preview 6515293
ERR580017_1 ERR580017 Preview 7076208
ERR580017_2 ERR580017 Preview 7076208
ERR580018_1 ERR580018 Preview 8250241
ERR580018_2 ERR580018 Preview 8250241
ERR580019_1 ERR580019 Preview 269
ERR580019_2 ERR580019 Preview 269
ERR580020_1 ERR580020 Preview 7841153
ERR580020_2 ERR580020 Preview 7841153
ERR580021_1 ERR580021 Preview 7416602
ERR580021_2 ERR580021 Preview 7416602
ERR580022_1 ERR580022 Preview 9775775
ERR580022_2 ERR580022 Preview 9775775
ERR580023_1 ERR580023 Preview 5879829
ERR580023_2 ERR580023 Preview 5879829
ERR580024_1 ERR580024 Preview 7257158
ERR580024_2 ERR580024 Preview 7257158
ERR580025_1 ERR580025 Preview 5422933
ERR580025_2 ERR580025 Preview 5422933
ERR580026_1 ERR580026 Preview 8760174
ERR580026_2 ERR580026 Preview 8760174
ERR580027_1 ERR580027 Preview 7420580
ERR580027_2 ERR580027 Preview 7420580
ERR580028_1 ERR580028 Preview 11309479
ERR580028_2 ERR580028 Preview 11309479
ERR580029_1 ERR580029 Preview 3357557
ERR580029_2 ERR580029 Preview 3357557
ERR580030_1 ERR580030 Preview 3052095
ERR580030_2 ERR580030 Preview 3052095
ERR580031_1 ERR580031 Preview 10403865
ERR580031_2 ERR580031 Preview 10403865
ERR580032_1 ERR580032 Preview 4939541
ERR580032_2 ERR580032 Preview 4939541
ERR580033_1 ERR580033 Preview 6787466
ERR580033_2 ERR580033 Preview 6787466
ERR580034_1 ERR580034 Preview 6683376
ERR580034_2 ERR580034 Preview 6683376
ERR580035_1 ERR580035 Preview 5632656
ERR580035_2 ERR580035 Preview 5632656
ERR580036_1 ERR580036 Preview 4902785
ERR580036_2 ERR580036 Preview 4902785
ERR580037_1 ERR580037 Preview 6575302
ERR580037_2 ERR580037 Preview 6575302
ERR580038_1 ERR580038 Preview 5745402
ERR580038_2 ERR580038 Preview 5745402
ERR580039_1 ERR580039 Preview 7774414
ERR580039_2 ERR580039 Preview 7774414
ERR580040_1 ERR580040 Preview 7827077
ERR580040_2 ERR580040 Preview 7827077
ERR580041_1 ERR580041 Preview 16950883
ERR580041_2 ERR580041 Preview 16950883
ERR580042_1 ERR580042 Preview 3234486
ERR580042_2 ERR580042 Preview 3234486
ERR580043_1 ERR580043 Preview 5632270
ERR580043_2 ERR580043 Preview 5632270
ERR580044_1 ERR580044 Preview 3143959
ERR580044_2 ERR580044 Preview 3143959
ERR580045_1 ERR580045 Preview 8876182
ERR580045_2 ERR580045 Preview 8876182
ERR580046_1 ERR580046 Preview 6012581
ERR580046_2 ERR580046 Preview 6012581
ERR580047_1 ERR580047 Preview 3742477
ERR580047_2 ERR580047 Preview 3742477
ERR580048_1 ERR580048 Preview 6893250
ERR580048_2 ERR580048 Preview 6893250
ERR580049_1 ERR580049 Preview 7032860
ERR580049_2 ERR580049 Preview 7032860
ERR580050_1 ERR580050 Preview 7586361
ERR580050_2 ERR580050 Preview 7586361
ERR580051_1 ERR580051 Preview 11107045
ERR580051_2 ERR580051 Preview 11107045
ERR580052_1 ERR580052 Preview 7538152
ERR580052_2 ERR580052 Preview 7538152
ERR580053_1 ERR580053 Preview 4337881
ERR580053_2 ERR580053 Preview 4337881
ERR580054_1 ERR580054 Preview 12424669
ERR580054_2 ERR580054 Preview 12424669
ERR580055_1 ERR580055 Preview 3147480
ERR580055_2 ERR580055 Preview 3147480
ERR580056_1 ERR580056 Preview 6951658
ERR580056_2 ERR580056 Preview 6951658
ERR580057_1 ERR580057 Preview 2903225
ERR580057_2 ERR580057 Preview 2903225
ERR580058_1 ERR580058 Preview 4421620
ERR580058_2 ERR580058 Preview 4421620
ERR580059_1 ERR580059 Preview 7197655
ERR580059_2 ERR580059 Preview 7197655
ERR580060_1 ERR580060 Preview 5708384
ERR580060_2 ERR580060 Preview 5708384
ERR580061_1 ERR580061 Preview 6858504
ERR580061_2 ERR580061 Preview 6858504
ERR580062_1 ERR580062 Preview 6325943
ERR580062_2 ERR580062 Preview 6325943
ERR580063_1 ERR580063 Preview 6064126
ERR580063_2 ERR580063 Preview 6064126
ERR580064_1 ERR580064 Preview 9620118
ERR580064_2 ERR580064 Preview 9620118
ERR580065_1 ERR580065 Preview 2997101
ERR580065_2 ERR580065 Preview 2997101
ERR580066_1 ERR580066 Preview 243
ERR580066_2 ERR580066 Preview 243
ERR580067_1 ERR580067 Preview 7531289
ERR580067_2 ERR580067 Preview 7531289
ERR580068_1 ERR580068 Preview 7257889
ERR580068_2 ERR580068 Preview 7257889
ERR580069_1 ERR580069 Preview 259
ERR580069_2 ERR580069 Preview 259
ERR580070_1 ERR580070 Preview 7011756
ERR580070_2 ERR580070 Preview 7011756
ERR580071_1 ERR580071 Preview 6803340
ERR580071_2 ERR580071 Preview 6803340
ERR580072_1 ERR580072 Preview 6193118
ERR580072_2 ERR580072 Preview 6193118
ERR580073_1 ERR580073 Preview 8228985
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Organism : Mus musculus

Download :

File Size : 647M

Mouse Cell Data

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tSNE image.
Image Currently Unavailable
PCA image.
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Gene Body Coverage image.

Data Resources


Organism Run Metadata Link Data Repository Link Pubmed Record Link Author Provided Files DAVID Annotation Chart Link DAVID Annotation Table Link Gene Body Coverage Matrix Link PCA Matrix Link Krona Plot Img Link Unmapped Reads Link Expression Correlation
Mus musculus