SCPortalen


Single-Cell RNA Sequencing Reveals T Helper Cells Synthesizing Steroids De Novo to Contribute to Immune Homeostasis


T helper 2 (Th2) cells regulate helminth infections, allergic disorders, tumor immunity, and pregnancy by secreting various cytokines. It is likely that there are undiscovered Th2 signaling molecules. Although steroids are known to be immunoregulators, de novo steroid production from immune cells has not been previously characterized. Here, we demonstrate production of the steroid pregnenolone by Th2 cells in vitro and in vivo in a helminth infection model. Single-cell RNA sequencing and quantitative PCR analysis suggest that pregnenolone synthesis in Th2 cells is related to immunosuppression. In support of this, we show that pregnenolone inhibits Th cell proliferation and B cell immunoglobulin class switching. We also show that steroidogenic Th2 cells inhibit Th cell proliferation in a Cyp11a1 enzyme-dependent manner. We propose pregnenolone as a lymphosteroid, a steroid produced by lymphocytes. We speculate that this de novo steroid production may be an intrinsic phenomenon of Th2-mediated immune responses to actively restore immune homeostasis.

E-MTAB-2512 Samples



Cell Metadata and BAM Files

Bulk Download

BAM Files Run Accession Number Sample Accession Number Organism Organ/Tissue Dev. Stage Cell Type Sequencer Protocol Assay Type Library Layout Ontology Term Cell Cycle Phase
ERR488952 ERS444188 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR488953 ERS444166 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488954 ERS444167 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488955 ERS444179 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488956 ERS444173 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488957 ERS444131 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488958 ERS444187 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488959 ERS444161 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488960 ERS444183 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488961 ERS444205 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G1.S
ERR488962 ERS444132 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR488963 ERS444155 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488964 ERS444195 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488965 ERS444206 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2
ERR488966 ERS444210 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488967 ERS444172 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488968 ERS444178 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488969 ERS444211 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR488970 ERS444136 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488971 ERS444204 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488972 ERS444170 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488973 ERS444124 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2
ERR488974 ERS444154 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G1.S
ERR488975 ERS444148 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488976 ERS444203 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488977 ERS444145 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488978 ERS444207 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488979 ERS444174 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR488980 ERS444186 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488981 ERS444151 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488982 ERS444160 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488983 ERS444153 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488984 ERS444192 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2
ERR488985 ERS444162 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488986 ERS444135 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488987 ERS444127 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488988 ERS444142 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488989 ERS444175 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488990 ERS444143 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488991 ERS444202 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488992 ERS444165 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488993 ERS444126 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488994 ERS444147 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR488995 ERS444185 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2
ERR488996 ERS444133 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G1.S
ERR488997 ERS444123 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR488998 ERS444213 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR488999 ERS444191 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G1.S
ERR489000 ERS444158 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489001 ERS444156 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489002 ERS444196 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G1.S
ERR489003 ERS444150 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G1.S
ERR489004 ERS444152 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489005 ERS444216 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR489006 ERS444201 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR489007 ERS444168 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2
ERR489008 ERS444144 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR489009 ERS444197 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489010 ERS444199 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489011 ERS444193 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489012 ERS444157 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489013 ERS444190 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489014 ERS444177 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G1.S
ERR489015 ERS444189 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489016 ERS444134 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489017 ERS444149 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489018 ERS444129 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR489019 ERS444215 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2
ERR489020 ERS444140 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR489021 ERS444159 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489022 ERS444125 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR489023 ERS444218 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489024 ERS444200 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G1.S
ERR489025 ERS444181 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489026 ERS444128 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G1.S
ERR489027 ERS444141 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489028 ERS444146 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G1.S
ERR489029 ERS444212 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489030 ERS444208 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489031 ERS444176 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489032 ERS444171 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489033 ERS444198 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G1.S
ERR489034 ERS444130 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489035 ERS444164 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2
ERR489036 ERS444139 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2
ERR489037 ERS444169 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G1.S
ERR489038 ERS444163 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489039 ERS444214 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489040 ERS444217 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489041 ERS444209 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489042 ERS444137 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] S
ERR489043 ERS444184 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR489044 ERS444180 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489045 ERS444182 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1
ERR489046 ERS444194 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] G2.M
ERR489047 ERS444138 Mus musculus Spleen Adult Primary CD4+ spleenocyte Hi-Seq SMARTer RNA-Seq Paired-End CL:0000545 [T-helper 1 cell ] M.G1

FASTQC Report



FASTQC File ID Cell Accession Number FASTQC Report Link No. Sequence Tags
ERR488952_1 ERR488952 Preview 16076782
ERR488952_2 ERR488952 Preview 16076782
ERR488953_1 ERR488953 Preview 13476497
ERR488953_2 ERR488953 Preview 13476497
ERR488954_1 ERR488954 Preview 13795023
ERR488954_2 ERR488954 Preview 13795023
ERR488955_1 ERR488955 Preview 26685429
ERR488955_2 ERR488955 Preview 26685429
ERR488956_1 ERR488956 Preview 22529486
ERR488956_2 ERR488956 Preview 22529486
ERR488957_1 ERR488957 Preview 15138542
ERR488957_2 ERR488957 Preview 15138542
ERR488958_1 ERR488958 Preview 10453364
ERR488958_2 ERR488958 Preview 10453364
ERR488959_1 ERR488959 Preview 19002844
ERR488959_2 ERR488959 Preview 19002844
ERR488960_1 ERR488960 Preview 10301462
ERR488960_2 ERR488960 Preview 10301462
ERR488961_1 ERR488961 Preview 16629679
ERR488961_2 ERR488961 Preview 16629679
ERR488962_1 ERR488962 Preview 11825687
ERR488962_2 ERR488962 Preview 11825687
ERR488963_1 ERR488963 Preview 12991496
ERR488963_2 ERR488963 Preview 12991496
ERR488964_1 ERR488964 Preview 10779832
ERR488964_2 ERR488964 Preview 10779832
ERR488965_1 ERR488965 Preview 18388782
ERR488965_2 ERR488965 Preview 18388782
ERR488966_1 ERR488966 Preview 14227624
ERR488966_2 ERR488966 Preview 14227624
ERR488967_1 ERR488967 Preview 21060917
ERR488967_2 ERR488967 Preview 21060917
ERR488968_1 ERR488968 Preview 17611994
ERR488968_2 ERR488968 Preview 17611994
ERR488969_1 ERR488969 Preview 18371199
ERR488969_2 ERR488969 Preview 18371199
ERR488970_1 ERR488970 Preview 13945048
ERR488970_2 ERR488970 Preview 13945048
ERR488971_1 ERR488971 Preview 19285416
ERR488971_2 ERR488971 Preview 19285416
ERR488972_1 ERR488972 Preview 14477092
ERR488972_2 ERR488972 Preview 14477092
ERR488973_1 ERR488973 Preview 22590713
ERR488973_2 ERR488973 Preview 22590713
ERR488974_1 ERR488974 Preview 9223957
ERR488974_2 ERR488974 Preview 9223957
ERR488975_1 ERR488975 Preview 25286639
ERR488975_2 ERR488975 Preview 25286639
ERR488976_1 ERR488976 Preview 19229600
ERR488976_2 ERR488976 Preview 19229600
ERR488977_1 ERR488977 Preview 17861831
ERR488977_2 ERR488977 Preview 17861831
ERR488978_1 ERR488978 Preview 11163281
ERR488978_2 ERR488978 Preview 11163281
ERR488979_1 ERR488979 Preview 13924931
ERR488979_2 ERR488979 Preview 13924931
ERR488980_1 ERR488980 Preview 13833869
ERR488980_2 ERR488980 Preview 13833869
ERR488981_1 ERR488981 Preview 15743101
ERR488981_2 ERR488981 Preview 15743101
ERR488982_1 ERR488982 Preview 13958181
ERR488982_2 ERR488982 Preview 13958181
ERR488983_1 ERR488983 Preview 10401674
ERR488983_2 ERR488983 Preview 10401674
ERR488984_1 ERR488984 Preview 15174841
ERR488984_2 ERR488984 Preview 15174841
ERR488985_1 ERR488985 Preview 10879343
ERR488985_2 ERR488985 Preview 10879343
ERR488986_1 ERR488986 Preview 19494813
ERR488986_2 ERR488986 Preview 19494813
ERR488987_1 ERR488987 Preview 9177922
ERR488987_2 ERR488987 Preview 9177922
ERR488988_1 ERR488988 Preview 18724415
ERR488988_2 ERR488988 Preview 18724415
ERR488989_1 ERR488989 Preview 14274404
ERR488989_2 ERR488989 Preview 14274404
ERR488990_1 ERR488990 Preview 11107352
ERR488990_2 ERR488990 Preview 11107352
ERR488991_1 ERR488991 Preview 19113183
ERR488991_2 ERR488991 Preview 19113183
ERR488992_1 ERR488992 Preview 15374458
ERR488992_2 ERR488992 Preview 15374458
ERR488993_1 ERR488993 Preview 16080951
ERR488993_2 ERR488993 Preview 16080951
ERR488994_1 ERR488994 Preview 9425233
ERR488994_2 ERR488994 Preview 9425233
ERR488995_1 ERR488995 Preview 9390801
ERR488995_2 ERR488995 Preview 9390801
ERR488996_1 ERR488996 Preview 12134985
ERR488996_2 ERR488996 Preview 12134985
ERR488997_1 ERR488997 Preview 19325141
ERR488997_2 ERR488997 Preview 19325141
ERR488998_1 ERR488998 Preview 17520328
ERR488998_2 ERR488998 Preview 17520328
ERR488999_1 ERR488999 Preview 18550238
ERR488999_2 ERR488999 Preview 18550238
ERR489000_1 ERR489000 Preview 13659851
ERR489000_2 ERR489000 Preview 13659851
ERR489001_1 ERR489001 Preview 21055543
ERR489001_2 ERR489001 Preview 21055543
ERR489002_1 ERR489002 Preview 11544623
ERR489002_2 ERR489002 Preview 11544623
ERR489003_1 ERR489003 Preview 14672221
ERR489003_2 ERR489003 Preview 14672221
ERR489004_1 ERR489004 Preview 15005723
ERR489004_2 ERR489004 Preview 15005723
ERR489005_1 ERR489005 Preview 11878529
ERR489005_2 ERR489005 Preview 11878529
ERR489006_1 ERR489006 Preview 2202048
ERR489006_2 ERR489006 Preview 2202048
ERR489007_1 ERR489007 Preview 19236698
ERR489007_2 ERR489007 Preview 19236698
ERR489008_1 ERR489008 Preview 14818180
ERR489008_2 ERR489008 Preview 14818180
ERR489009_1 ERR489009 Preview 19642347
ERR489009_2 ERR489009 Preview 19642347
ERR489010_1 ERR489010 Preview 10158543
ERR489010_2 ERR489010 Preview 10158543
ERR489011_1 ERR489011 Preview 16838366
ERR489011_2 ERR489011 Preview 16838366
ERR489012_1 ERR489012 Preview 18695047
ERR489012_2 ERR489012 Preview 18695047
ERR489013_1 ERR489013 Preview 14901933
ERR489013_2 ERR489013 Preview 14901933
ERR489014_1 ERR489014 Preview 18592424
ERR489014_2 ERR489014 Preview 18592424
ERR489015_1 ERR489015 Preview 13926524
ERR489015_2 ERR489015 Preview 13926524
ERR489016_1 ERR489016 Preview 18101584
ERR489016_2 ERR489016 Preview 18101584
ERR489017_1 ERR489017 Preview 26534228
ERR489017_2 ERR489017 Preview 26534228
ERR489018_1 ERR489018 Preview 22432600
ERR489018_2 ERR489018 Preview 22432600
ERR489019_1 ERR489019 Preview 14835007
ERR489019_2 ERR489019 Preview 14835007
ERR489020_1 ERR489020 Preview 22470189
ERR489020_2 ERR489020 Preview 22470189
ERR489021_1 ERR489021 Preview 28850876
ERR489021_2 ERR489021 Preview 28850876
ERR489022_1 ERR489022 Preview 16380311
ERR489022_2 ERR489022 Preview 16380311
ERR489023_1 ERR489023 Preview 12780764
ERR489023_2 ERR489023 Preview 12780764
ERR489024_1 ERR489024 Preview 14215363
ERR489024_2 ERR489024 Preview 14215363
ERR489025_1 ERR489025 Preview 19457185
ERR489025_2 ERR489025 Preview 19457185
ERR489026_1 ERR489026 Preview 22930055
ERR489026_2 ERR489026 Preview 22930055
ERR489027_1 ERR489027 Preview 9954374
ERR489027_2 ERR489027 Preview 9954374
ERR489028_1 ERR489028 Preview 20732636
ERR489028_2 ERR489028 Preview 20732636
ERR489029_1 ERR489029 Preview 21783996
ERR489029_2 ERR489029 Preview 21783996
ERR489030_1 ERR489030 Preview 11321312
ERR489030_2 ERR489030 Preview 11321312
ERR489031_1 ERR489031 Preview 25962376
ERR489031_2 ERR489031 Preview 25962376
ERR489032_1 ERR489032 Preview 11211691
ERR489032_2 ERR489032 Preview 11211691
ERR489033_1 ERR489033 Preview 10053178
ERR489033_2 ERR489033 Preview 10053178
ERR489034_1 ERR489034 Preview 13561593
ERR489034_2 ERR489034 Preview 13561593
ERR489035_1 ERR489035 Preview 14685550
ERR489035_2 ERR489035 Preview 14685550
ERR489036_1 ERR489036 Preview 15272798
ERR489036_2 ERR489036 Preview 15272798
ERR489037_1 ERR489037 Preview 15502256
ERR489037_2 ERR489037 Preview 15502256
ERR489038_1 ERR489038 Preview 18039621
ERR489038_2 ERR489038 Preview 18039621
ERR489039_1 ERR489039 Preview 17341834
ERR489039_2 ERR489039 Preview 17341834
ERR489040_1 ERR489040 Preview 13234761
ERR489040_2 ERR489040 Preview 13234761
ERR489041_1 ERR489041 Preview 20874274
ERR489041_2 ERR489041 Preview 20874274
ERR489042_1 ERR489042 Preview 11815144
ERR489042_2 ERR489042 Preview 11815144
ERR489043_1 ERR489043 Preview 16959603
ERR489043_2 ERR489043 Preview 16959603
ERR489044_1 ERR489044 Preview 18194743
ERR489044_2 ERR489044 Preview 18194743
ERR489045_1 ERR489045 Preview 21739226
ERR489045_2 ERR489045 Preview 21739226
ERR489046_1 ERR489046 Preview 13836676
ERR489046_2 ERR489046 Preview 13836676
ERR489047_1 ERR489047 Preview 18070277
ERR489047_2 ERR489047 Preview 18070277

Organism : Mus musculus

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File Size : 216M

Mouse Cell Data

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tSNE image.
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PCA image.
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Gene Body Coverage image.

Data Resources


Organism Run Metadata Link Data Repository Link Pubmed Record Link Author Provided Files DAVID Annotation Chart Link DAVID Annotation Table Link Gene Body Coverage Matrix Link PCA Matrix Link Krona Plot Img Link Unmapped Reads Link Expression Correlation
Mus musculus